Your job contains 1 sequence.
>000854
MVGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMK
DDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLDD
PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYG
EQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYED
DSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSLNTDLLLA
LVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAV
ASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF
CVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS
ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD
FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL
GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE
ERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEII
LSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLV
CVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGSILLKKFCGKSNSNVLSLVSRL
RSTFMDERIGIEVNVDQNQILLFASSQDIEEVLGLVSDVLEYEKKWLHNECIEKCLYQGA
GVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDDKELLMFLEKNASGSICSIHKF
AVGQDSDEKDKWGRVTFLTPDTAGKATELNGVEYNGSLLKVVPSRATLGGDNKMYTFPAV
KAKVYWPRRLSKGFAVVKCDATDVEFLVKDFFDLAIGGRYVRCEIGRRSMDAVVISGLDK
ELSEDEILGELRKVTTRRIRDLFLVRGDAVECPQFDAFEEALLREISRFMPKRNSHANCC
RVQVFPPEPKDAFMKAFITFDGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLS
CPASVYSVIKEELNSLLATLNRVNGTFSNSFSFTLYLYLSLYLFIFMFCIHV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000854
(1252 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2125211 - symbol:AT4G01020 species:3702 "Arabi... 3795 0. 1
TAIR|locus:2142459 - symbol:AT5G10370 species:3702 "Arabi... 3753 0. 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 928 9.0e-111 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 889 2.1e-107 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 889 2.1e-107 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 889 2.1e-107 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 889 2.1e-107 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 889 2.1e-107 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 889 2.5e-107 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 889 2.7e-107 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 889 2.8e-107 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 886 4.5e-107 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 874 1.6e-101 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 849 1.0e-99 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 857 1.7e-99 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 873 3.2e-98 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 843 5.3e-98 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 842 1.4e-97 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 844 1.7e-97 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 843 2.3e-97 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 843 2.3e-97 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 842 3.0e-97 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 832 1.5e-94 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 929 2.7e-93 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 809 4.4e-91 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 809 4.4e-91 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 890 1.9e-90 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 890 1.9e-90 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 897 6.5e-90 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 889 4.6e-89 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 844 1.1e-85 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 856 1.9e-85 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 855 2.5e-85 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 834 1.5e-84 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 847 2.1e-84 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 857 5.4e-84 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 857 5.4e-84 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 760 1.0e-83 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 826 1.1e-83 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 761 1.3e-83 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 748 1.4e-82 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 831 1.5e-82 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 539 3.8e-81 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 817 5.6e-81 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 803 6.8e-81 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 812 2.1e-80 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 823 3.2e-79 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 787 3.7e-79 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 792 3.4e-78 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 789 7.3e-78 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 754 8.7e-78 3
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 592 2.8e-77 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 780 7.1e-77 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 799 8.1e-77 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 795 1.1e-76 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 798 1.1e-76 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 798 1.3e-76 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 796 1.8e-76 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 794 3.1e-76 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 794 3.1e-76 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 772 5.4e-76 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 785 1.3e-75 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 785 1.3e-75 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 781 6.3e-75 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 761 8.7e-75 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 758 1.8e-74 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 758 1.8e-74 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 752 8.4e-74 1
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 416 9.9e-74 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 751 1.1e-73 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 779 1.3e-73 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 748 2.3e-73 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 746 3.8e-73 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 746 3.8e-73 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 746 3.8e-73 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 746 3.8e-73 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 746 3.8e-73 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 746 3.8e-73 1
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 442 5.1e-73 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 741 1.3e-72 1
UNIPROTKB|P43329 - symbol:hrpA species:83333 "Escherichia... 767 2.6e-72 2
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 754 6.4e-72 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 445 8.3e-72 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 445 8.3e-72 2
UNIPROTKB|Q9KS77 - symbol:VC1382 "ATP-dependent helicase ... 759 1.3e-71 3
TIGR_CMR|VC_1382 - symbol:VC_1382 "ATP-dependent helicase... 759 1.3e-71 3
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 729 2.7e-71 1
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 727 4.4e-71 1
UNIPROTKB|Q608K8 - symbol:MCA1482 "ATP-dependent helicase... 746 1.1e-70 1
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 719 3.3e-70 1
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 717 5.4e-70 1
WB|WBGene00020263 - symbol:T05E8.3 species:6239 "Caenorha... 709 4.0e-69 1
UNIPROTKB|Q8EEY1 - symbol:hrpA "ATP-dependent helicase Hr... 728 1.1e-68 1
TIGR_CMR|SO_2229 - symbol:SO_2229 "ATP-dependent helicase... 728 1.1e-68 1
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 719 2.6e-67 2
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 706 1.6e-66 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 685 1.6e-66 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 685 1.6e-66 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 685 1.6e-66 1
CGD|CAL0002969 - symbol:orf19.107 species:5476 "Candida a... 682 3.3e-66 1
WARNING: Descriptions of 210 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 3795 (1341.0 bits), Expect = 0., P = 0.
Identities = 741/1234 (60%), Positives = 936/1234 (75%)
Query: 1 MVGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLME-GELVNKWLKM 59
+V LW+ RL G H +LIP+VVVPSD DEL++RLR+LF HV LME G+ V K ++M
Sbjct: 144 VVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKK-VRM 202
Query: 60 K-DDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL 118
+ DDK ++A+ S++ G + + VF E+KK L ER++++ R+ EF N M +L+YL
Sbjct: 203 EIDDKSRQVASFSSKRGLK--FEVF----EKKKALEAERDLVVNRLDEFNNAMKSILRYL 256
Query: 119 --DDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILR 176
D + D +V VF E +DW RI I+REC+RLEDGLPIY YR+ IL+
Sbjct: 257 IGQDGYEFDVDDEDDEDVAVFSLEGA--YDWRRIHYLILRECRRLEDGLPIYAYRRQILK 314
Query: 177 RIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRG 236
+I+ EQI+VLIGETG GKSTQLVQFLADSG+AA +SIVCTQPRKIAA++L RVREES G
Sbjct: 315 KIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSG 374
Query: 237 CYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXX 296
CYE+++V C P+FSS + SKV+YMTD+CLLQH+M DR LS ISC+I+DEAHERS
Sbjct: 375 CYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTD 434
Query: 297 XXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAG 356
RR DLRLVIMSATADA+QLS+Y +DCGI HV GRNFPV++ Y P T
Sbjct: 435 LLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEE 494
Query: 357 TSAV---ASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQ 413
S V ASY DVV+M E+H TEKEGTILAFLTS+ EVEWACE+F APSA+ALP HG+
Sbjct: 495 NSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGK 554
Query: 414 LSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRV 473
LSF+EQF VF++YPGRRKVIFATN+AETSLTIPGVK+VIDSGMVKES +EP TGM++L+V
Sbjct: 555 LSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKV 614
Query: 474 CRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGI 533
C+VSQSSA QRAGRAGRTEPGRCYRLYSK+DF++ LNQEPEI RVHLG+A+LR+LALGI
Sbjct: 615 CQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGI 674
Query: 534 RDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLIL 593
++ F+F+DAP +AI MAI+NLVQLGA+ NGV ELT+EG LVKLG+EP+LGKLIL
Sbjct: 675 DNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLIL 734
Query: 594 SCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYRE 653
CFR R+G+EG+VLAAVMANASSIFCRVG+ D+K+KAD LKVQFC+ NGDLFTLLSVY+E
Sbjct: 735 GCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKE 794
Query: 654 WDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYD 713
W SLPR+ RNKWCWENS+NAKS+RRC+DT+KELE C+E+EL ++ PSYW+WNP++ T++D
Sbjct: 795 WASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHD 854
Query: 714 KWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLS 773
K+LK +IL++LAENVAM++GYDQLGYEVA+T Q VQLHPSCSLL FGQKP+WVVFGELLS
Sbjct: 855 KYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLS 914
Query: 774 VNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGSILLKKFCGKXXXXX 833
+ +QYLVCVTAFDF++L L P P FD S M+ ++L V+ + G S +LK+FCGK
Sbjct: 915 IVDQYLVCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKSNRSL 974
Query: 834 XXXXXXXXXTFMDERIGIEVNVDQNQILLFASSQDIEEVLGLVSDVLEYEKKWLHNECIE 893
DERIGI+V+VDQN+I L+AS D+E+V LV+D LE EKKW+ NEC+E
Sbjct: 975 LSIVSRARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRNECLE 1034
Query: 894 KCLYQGAGVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDDKELLMFLEKNASGS 953
K L+ G G P +ALFG+GA+IKHLE+++RFLTVDV++ +++DD+ELL FLEK G
Sbjct: 1035 KYLFHGRGQIP-IALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKKIDGC 1093
Query: 954 ICSIHKFAVG-QDSDEKDKWGRVTFLTPDTAGKATELNGVEYNGSLLKVVPSRATLGGDN 1012
ICSI+KFA QD DEK+KWGR+TFLTP++A KATE+ ++ GS+LKV PS +T GG
Sbjct: 1094 ICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTGGGIF 1153
Query: 1013 KMYTFPAVKAKVYWPRRLSKGFAVVKCDATDVEFLVKDFFDLAIGGRYVRCEIGRRSMDA 1072
KM F +V AK+ WPR+ S G +KC + D+ ++ D L IG YV + + S D+
Sbjct: 1154 KMPYFSSVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQLSNDS 1213
Query: 1073 VVISGLDKELSEDEILGELRKVTTRRIRDLFLVRGD-AVECPQFDAFEEALLREISRFMP 1131
++ISGL +LSE E+L L T RR + F+ R +V+CP A EE L + I M
Sbjct: 1214 ILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMS 1272
Query: 1132 KRNSHANCCRVQVFPPEPKDAFMKAFITFDGRLHLEAAKALEQLEGKVLPGCGPWQKMKC 1191
+N NC +VQVF P+ + FM+A I FDGRLHLEAAKAL++L G+VLPGC PWQK+KC
Sbjct: 1273 AKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQKIKC 1332
Query: 1192 QQLFHSSLSCPASVYSVIKEELNSLLATLNRVNG 1225
+QLF SS+ C AS+Y+ +K +LN LLA R G
Sbjct: 1333 EQLFQSSIICSASIYNTVKRQLNVLLARFERQKG 1366
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 3753 (1326.2 bits), Expect = 0., P = 0.
Identities = 732/1233 (59%), Positives = 929/1233 (75%)
Query: 1 MVGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLME-GELVNKWLKM 59
+V LW+ RL G H +LIP+V+VPSD +EL++RLR+LF H+ LME GE V K
Sbjct: 147 VVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRLRDLFSSHILSLMENGEGVKKVRLE 206
Query: 60 KDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL- 118
++K ++ + S++ G + + VF E+KK + ER++++ R+ EF N M +L+YL
Sbjct: 207 IEEKSRQVVSFSSKRGLK--FEVF----EKKKAIEAERDLVVNRLEEFNNAMKSILRYLI 260
Query: 119 -DDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRR 177
D + + +V VF E +DW RI I REC+RLEDGLPIY YR+ IL++
Sbjct: 261 GQDGYEFDLDDEEEGDVAVFCLEGA--YDWRRIHCLIRRECRRLEDGLPIYAYRRQILKK 318
Query: 178 IYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGC 237
I+ EQI+VLIGETG GKSTQLVQFLADSG+AA +SIVCTQPRKIAA++LA RVREES GC
Sbjct: 319 IHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLADRVREESSGC 378
Query: 238 YEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXX 297
YE+++V C P+FSS + SKV+YMTD+CLLQH+M DR LS ISC+I+DEAHERS
Sbjct: 379 YEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDL 438
Query: 298 XXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGT 357
RR DLRLVIMSATADA QLS+YF+ CGI V GRNFPV++ Y P T
Sbjct: 439 LLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEEN 498
Query: 358 SAV---ASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQL 414
S V ASYV DVV+M E+H TEKEGTILAFLTS+ EVEWACE+F PSA+ALP HG+L
Sbjct: 499 SVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFITPSAIALPLHGKL 558
Query: 415 SFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVC 474
SF+EQF VF+++PGRRKVIFATN+AETSLTIPGVK+VIDSGMVKES +EP TGM++L+VC
Sbjct: 559 SFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVC 618
Query: 475 RVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIR 534
RVSQSSA QRAGRAGRTEPGRCYRLYSK+DF++ LNQEPEI RVHLG+A+LR+LALG+
Sbjct: 619 RVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVN 678
Query: 535 DVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILS 594
++ F+F+DAP +AI MA++NLVQLGA+ NGV ELT+EG LVKLG+EP+LGKLIL
Sbjct: 679 NIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILG 738
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREW 654
CFR R+G+EG+VLAAVMANASSIFCRVG+ D+K+KAD LKVQFC++NGDLFTLLSVY+EW
Sbjct: 739 CFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEW 798
Query: 655 DSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDK 714
SLPRE RNKWCWENS+NAKS+RRC+DT+KELE C+E+EL ++ PSYW+WNP++ T++DK
Sbjct: 799 ASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDK 858
Query: 715 WLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSV 774
LK +IL++LAENVAM++GY+QLGYEVA+TGQ VQLHPSCSLL FGQKP+WVVFGELLS+
Sbjct: 859 HLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSI 918
Query: 775 NNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGSILLKKFCGKXXXXXX 834
+QYLVCVTA DF++L L P P FDVS M+ ++L ++ + G S +LK+FCGK
Sbjct: 919 VDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKKVVGCSSTVLKRFCGKSNRSLL 978
Query: 835 XXXXXXXXTFMDERIGIEVNVDQNQILLFASSQDIEEVLGLVSDVLEYEKKWLHNECIEK 894
DERIGI+V+VDQN+I L+A D+E+V LV+D LE EKKW+HNEC+EK
Sbjct: 979 SIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDMEKVSALVNDALECEKKWMHNECLEK 1038
Query: 895 CLYQGAGVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDDKELLMFLEKNASGSI 954
LY G G P +ALFG+GA+IKHLE+++RFLTVDV + +++DD+ELL FLEK GSI
Sbjct: 1039 YLYHGRGQVP-IALFGSGAQIKHLEVDQRFLTVDVLYYGDDVVDDRELLTFLEKKIDGSI 1097
Query: 955 CSIHKFAVG-QDSDEKDKWGRVTFLTPDTAGKATELNGVEYNGSLLKVVPSRATLGGDNK 1013
CSI+KFA QD DEK+KWGR+TFLTP++A KATE+ + GS+LK+ PS +T GG K
Sbjct: 1098 CSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFYFKGSVLKLFPSLSTGGGIFK 1157
Query: 1014 MYTFPAVKAKVYWPRRLSKGFAVVKCDATDVEFLVKDFFDLAIGGRYVRCEIGRRSMDAV 1073
M F +V AK+ WPRR S G +KC + D+ ++ D L IG YV + ++S D++
Sbjct: 1158 MPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRILGDISSLEIGTNYVHIQRDQQSNDSI 1217
Query: 1074 VISGLDKELSEDEILGELRKVTTRRIRDLFLVRGD-AVECPQFDAFEEALLREISRFMPK 1132
+ISGL +LSE E+L L T RR + F+ R +V+CP A EE L + I M
Sbjct: 1218 LISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMSA 1276
Query: 1133 RNSHANCCRVQVFPPEPKDAFMKAFITFDGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQ 1192
+N NC +VQVF P+ + FM+A I FDGRLH EAAKAL++L G+VLPGC PWQK+KC+
Sbjct: 1277 KNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFEAAKALQELNGEVLPGCLPWQKIKCE 1336
Query: 1193 QLFHSSLSCPASVYSVIKEELNSLLATLNRVNG 1225
QLF SS+ C AS+Y+ +K +LN LLA R G
Sbjct: 1337 QLFQSSIICSASIYNTVKRQLNVLLARFERQKG 1369
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 928 (331.7 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 205/541 (37%), Positives = 314/541 (58%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++++++ ++ Q+LV+IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 513 ESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVA 572
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC + V F D+ + YMTD LL+ + D +LS+ S
Sbjct: 573 AMSVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSV 631
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ RR DLRL++ SAT DA + S YF++C I + GR
Sbjct: 632 IMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRT 691
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
FPV++ Y Y+ + V ++H TE EG IL FLT + E++ AC+
Sbjct: 692 FPVEILYTK------QPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYE 745
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVI 452
+ P + LP + L + Q +F P G+RKV+ ATN+AE SLTI G+ +V+
Sbjct: 746 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVV 805
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLN 511
D G K++ + P G+ L + +SQ+SA QRAGRAGRT PG+CYRLY++S + P
Sbjct: 806 DPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPT 865
Query: 512 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R++LG+ L + A+GI D+ FDF+D P +A+ A+ L LGA+ G+
Sbjct: 866 SIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALD-EEGL-- 922
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT+ G+ + + +EP L K++L+ E L + A M +IF R +++ +AD
Sbjct: 923 LTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIA-MIQTGNIFYR--PREKQAQAD 979
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+ +F GD TLL+VY W + + WC+EN + ++SLRR QD K+L + ++
Sbjct: 980 QKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMD 1037
Query: 692 K 692
K
Sbjct: 1038 K 1038
Score = 186 (70.5 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 52/191 (27%), Positives = 95/191 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
+++ +AD + +F GD TLL+VY W + + WC+EN + ++SLRR QD K
Sbjct: 973 EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQDVRK 1030
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+L + ++K ++ + +T+ +++ I + + A Q GY +
Sbjct: 1031 QLLSIMDKYKLDVVTA-----GKNFTK----IRKAITAGFFFHGARKD--PQEGYRTLVE 1079
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFDVS 802
Q V +HPS +L F ++P WV++ +L+ +Y+ VT D L L P + D +
Sbjct: 1080 NQPVYIHPSSAL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPT 1137
Query: 803 MMERKKLHVRV 813
M ++K R+
Sbjct: 1138 KMSKRKRQERI 1148
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 889 (318.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 573 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 632
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 633 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 691
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 692 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 751
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 752 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 805
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 806 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 865
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 866 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 925
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 926 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 982
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 983 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1039
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1040 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1092
Score = 193 (73.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1033 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1090
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1091 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1139
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1140 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1194
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 889 (318.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 559 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 618
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 619 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 677
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 678 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 737
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 738 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 791
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 792 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 851
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 852 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 911
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 912 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 968
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 969 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1025
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1026 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1078
Score = 193 (73.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1019 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1076
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1077 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1125
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1126 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1180
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 889 (318.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 563 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 622
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 623 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 681
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 682 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 741
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 742 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 795
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 796 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 855
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 856 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 915
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 916 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 972
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1029
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1030 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1082
Score = 193 (73.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1023 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1080
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1081 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1129
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1130 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1184
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 889 (318.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 555 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 614
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 615 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 673
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 674 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 733
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 734 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 787
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 788 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 847
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 848 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 907
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 908 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 964
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 965 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1021
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1022 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1074
Score = 193 (73.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1015 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1072
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1073 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1121
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1122 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1176
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 889 (318.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 532 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 591
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 592 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 650
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 651 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 710
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 711 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 764
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 765 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 824
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 825 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 884
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 885 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 941
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 942 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 998
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 999 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1051
Score = 193 (73.0 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 992 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1049
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1050 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1098
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1099 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1153
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 889 (318.0 bits), Expect = 2.5e-107, Sum P(2) = 2.5e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 585 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 644
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 645 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 703
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 704 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 763
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 764 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 817
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 818 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 877
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 878 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 937
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 938 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 994
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 995 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1051
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1052 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1104
Score = 193 (73.0 bits), Expect = 2.5e-107, Sum P(2) = 2.5e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1045 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1102
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1103 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1151
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1152 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1206
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 889 (318.0 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 201/535 (37%), Positives = 303/535 (56%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G I CTQPR++A
Sbjct: 553 ESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVA 612
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL + +
Sbjct: 613 AMSVAKRVSEEY-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYAI 671
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 672 IMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 731
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV+V Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 732 YPVEVLYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 785
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 786 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 845
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 846 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 905
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 906 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 962
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 963 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1019
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1020 QKKAKFHQPEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1072
Score = 192 (72.6 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1013 DKQALADQKKAKFHQPEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1070
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1071 QMLGIMDRHKLDVVSC------GKATVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1119
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1120 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1174
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 889 (318.0 bits), Expect = 2.8e-107, Sum P(2) = 2.8e-107
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 587 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 646
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 647 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 705
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 706 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 765
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 766 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 819
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 820 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 879
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 880 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 939
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 940 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 996
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 997 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1053
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1054 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1106
Score = 193 (73.0 bits), Expect = 2.8e-107, Sum P(2) = 2.8e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 1047 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1104
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1105 QMLGIMDRHKLDVVSC------GKSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1153
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1154 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1208
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 886 (316.9 bits), Expect = 4.5e-107, Sum P(2) = 4.5e-107
Identities = 199/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPI+ ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 511 ESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 570
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 571 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 629
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 630 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 689
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 690 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 743
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 744 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 803
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 804 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 863
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 864 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 920
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 921 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 977
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 978 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1030
Score = 193 (73.0 bits), Expect = 4.5e-107, Sum P(2) = 4.5e-107
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K
Sbjct: 971 DKQALADQKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRK 1028
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++ +++ ++ K T +++ I S N A Q GY +
Sbjct: 1029 QMLGIMDRHKLDVVSC------GKATVR---VQKAICSGFFRNAAKKD--PQEGYRTLID 1077
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q V +HPS +L F ++P WVV+ EL+ +Y+ VT D L P+ F VS
Sbjct: 1078 QQVVYIHPSSAL--FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA-FFKVS 1132
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 874 (312.7 bits), Expect = 1.6e-101, Sum P(2) = 1.6e-101
Identities = 198/545 (36%), Positives = 310/545 (56%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQP 218
K+ + LP++ +R+ +++ + QI++++GETG GK+TQL Q+LA++G A E I CTQP
Sbjct: 536 KQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQP 595
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLS 278
R++AA+S+A+RV EE GC V F +++ YMTD L + + D DL
Sbjct: 596 RRVAAMSVAKRVSEEV-GCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLK 654
Query: 279 RISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHV 338
R S I++DEAHER+ RR DL++++ SAT DA + S YF +C I +
Sbjct: 655 RYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTI 714
Query: 339 VGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
GR FPV++ Y + Y+ + V ++H E G IL FLT + E++ +CE
Sbjct: 715 PGRTFPVEILY------SKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCE 768
Query: 399 -KFD--------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGV 448
F+ P + LP + L + Q +F + PG RKV+ ATN+AETS+TI +
Sbjct: 769 ILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHI 828
Query: 449 KFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR 508
+V+D G VK++ ++P GM+ L V +SQ+ ANQRAGRAGRT PG+C+RLY+++ ++T
Sbjct: 829 YYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTE 888
Query: 509 PLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
L PEI R +L +L + A+GI D+ FDF+D P + A+ L L A+ +
Sbjct: 889 MLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALD-DE 947
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
G+ LT G+ + +EP L K++++ R E L + A M N ++F R +++
Sbjct: 948 GL--LTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVA-MLNLPNVFYR--PKEKQ 1002
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELE 687
+AD K +F NGD TLL+VY W R + WC EN + ++L R +D ++E
Sbjct: 1003 TQADAKKAKFHDPNGDHLTLLNVYNAWKQ-SRYSK-PWCAENFIQFRALTRARDVRNQIE 1060
Query: 688 TCLEK 692
+++
Sbjct: 1061 RIMQR 1065
Score = 173 (66.0 bits), Expect = 1.6e-101, Sum P(2) = 1.6e-101
Identities = 50/182 (27%), Positives = 85/182 (46%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
+++ +AD K +F NGD TLL+VY W R + WC EN + ++L R +D
Sbjct: 1000 EKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQ-SRYSK-PWCAENFIQFRALTRARDVRN 1057
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
++E +++ Y + + T +++ + S N A Q GY +
Sbjct: 1058 QIERIMQRF------KYQVMSCGSDTNR---VRQALCSGFFRNAARKD--QQEGYRTLIE 1106
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMM 804
G V LHPS +L FG+ WV++ L+ +Y+ C T+ + L P+ F VS
Sbjct: 1107 GTPVYLHPSSAL--FGKHAEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPT-FFKVSAS 1163
Query: 805 ER 806
++
Sbjct: 1164 DK 1165
Score = 37 (18.1 bits), Expect = 3.7e-87, Sum P(2) = 3.7e-87
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 894 KCLYQGAGV--SPSVALFGAGAE 914
+ L +G V PS ALFG AE
Sbjct: 1102 RTLIEGTPVYLHPSSALFGKHAE 1124
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 849 (303.9 bits), Expect = 1.0e-99, Sum P(2) = 1.0e-99
Identities = 207/619 (33%), Positives = 341/619 (55%)
Query: 94 FKEREMIMRRVREFKNGMHCVLKY-LDDPQNVAKKESYDANVDVF--RFEDCQRFD-WSR 149
FKE + ++ RE + M L L K D + + F +++ + + + +
Sbjct: 264 FKEEKFKQKKQREKEEKMQSELSDPLFQTSEPVKNSDLDPDTESFISKWKKSNKTETFGK 323
Query: 150 IQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSG--- 206
+ ++E +R+ LP+Y R +L I Q +V++GETG GK+TQ+VQ++ + G
Sbjct: 324 RTSLPIQEQRRM---LPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNK 380
Query: 207 IAAEQSIV-CTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDH 265
+ + ++ CTQPR++AA S+A+RV EE GC D+V F ++ + YMTD
Sbjct: 381 VGGQTKLIGCTQPRRVAAESVAKRVSEEV-GCKLGDTVGYTIRFEDVTSENTVIKYMTDG 439
Query: 266 CLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQ 325
L + +ND +++R S I++DEAHER+ + +L++++ SAT D+++
Sbjct: 440 MLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNK 499
Query: 326 LSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
S+YF +C I + GR FPV+V Y Y++ + V ++H +E G IL
Sbjct: 500 FSRYFNNCPIITIPGRTFPVEVLYTKAPEM------DYLAAALESVIQIHVSEPAGDILV 553
Query: 386 FLTSKMEVEWACEKF---------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFA 435
FLT + E+E +CE + P + LP + L + Q +F+ + PG RKVI A
Sbjct: 554 FLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILA 613
Query: 436 TNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGR 495
TN+AETS+TI G+ +V+D G VK + ++ GM+ LRV +S++ ANQR+GRAGRT PG+
Sbjct: 614 TNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGK 673
Query: 496 CYRLYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAI 554
CYRLY++ +E + N PEI R +L +L + A+GI D+ F+F+D PS + A+
Sbjct: 674 CYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTAL 733
Query: 555 RNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANA 614
+L L A+ ++G LT G+ + L +EP L K ++ E L + A M +
Sbjct: 734 EDLYILDALD-DDG--NLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVA-MLSV 789
Query: 615 SSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNK-WCWENSVNA 673
+IF R D++ AD K +F H GD TLL+V++ W R +K WC +N +
Sbjct: 790 QTIFYR--PKDKQALADQRKSRFHHSLGDHLTLLNVFQSWC---RNNYSKTWCRDNFIQE 844
Query: 674 KSLRRCQDTIKELETCLEK 692
+S+RR + K+L++ +++
Sbjct: 845 RSMRRAMEVRKQLKSIMQR 863
Score = 164 (62.8 bits), Expect = 1.0e-99, Sum P(2) = 1.0e-99
Identities = 50/172 (29%), Positives = 86/172 (50%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNK-WCWENSVNAKSLRRCQDTI 683
D++ AD K +F H GD TLL+V++ W R +K WC +N + +S+RR +
Sbjct: 798 DKQALADQRKSRFHHSLGDHLTLLNVFQSWC---RNNYSKTWCRDNFIQERSMRRAMEVR 854
Query: 684 KELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAM 743
K+L++ +++ Y + + D+ ++ S +N A + GY+
Sbjct: 855 KQLKSIMQRF------GYKTMSCGN--DVDR-VRRTFCSGYFKNSA--KRQEGEGYKTLN 903
Query: 744 TGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
V LHPS SL +G+KP +V++ LL + +Y+ CV+ D + L L P
Sbjct: 904 ENTLVYLHPSSSL--YGKKPQYVIYHTLLLTSKEYMHCVSIIDPNWLYELAP 953
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 857 (306.7 bits), Expect = 1.7e-99, Sum P(2) = 1.7e-99
Identities = 199/533 (37%), Positives = 297/533 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPIY R D+++ + QIL++IGETG GK+TQ+ Q+L + G A I CTQPR++AA+
Sbjct: 586 LPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAM 645
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
S+A+RV EE GC V F ++ + YMTD LL+ + + +L S I+
Sbjct: 646 SVAKRVAEEY-GCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIM 704
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
+DEAHER+ +R +L+L++ SAT DA + S+YF+ I + GR FP
Sbjct: 705 LDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFP 764
Query: 345 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF---- 400
V+V Y Y+ + V ++H E G IL FLT + E++ ACE
Sbjct: 765 VEVLYTK------EPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERM 818
Query: 401 -----DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 454
D P + LP + L + Q +F P G RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 819 KSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDP 878
Query: 455 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-NQE 513
G VK+ + TGM+ L V +SQ++A QRAGRAGRT PG+ YRLY++ + L
Sbjct: 879 GFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPV 938
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
PEI R +L VL++ +GI D+ FDF+DAP +++ MA+ L L A+ + G+ LT
Sbjct: 939 PEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALD-DEGL--LT 995
Query: 574 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 633
G+ + + +EP L K+++ + E L + + M + ++F R D++ AD
Sbjct: 996 RLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVS-MLSVQNVFYR--PKDKQALADQK 1052
Query: 634 KVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN V ++L+R QD K+L
Sbjct: 1053 KAKFNQAEGDHLTLLAVYNSWKN--NKFSNAWCYENFVQIRTLKRSQDVRKQL 1103
Score = 188 (71.2 bits), Expect = 1.7e-99, Sum P(2) = 1.7e-99
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D++ AD K +F GD TLL+VY W + + N WC+EN V ++L+R QD K
Sbjct: 1044 DKQALADQKKAKFNQAEGDHLTLLAVYNSWKN--NKFSNAWCYENFVQIRTLKRSQDVRK 1101
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+L +++ ++ + + +++ I S N A Q GY +
Sbjct: 1102 QLLGIMDRHKLDVVSA---------GKNSVRIQKAICSGFFRNAAKKD--PQEGYRTLVD 1150
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 796
Q V +HPS +L F ++P WV++ EL+ +Y+ VT D L PS
Sbjct: 1151 SQVVYIHPSSAL--FNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPS 1200
Score = 40 (19.1 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 452 IDSGMVKESYFEPGTGMNVLRVCR-VSQSSANQRAGR 487
+D+ M++ PG G ++R + VS ++R R
Sbjct: 144 VDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSR 180
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 873 (312.4 bits), Expect = 3.2e-98, Sum P(2) = 3.2e-98
Identities = 201/539 (37%), Positives = 307/539 (56%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQP 218
K+ + LP+Y +RQ +L + Q+L+++G+TG GK+TQ+ Q+LA++G A + I CTQP
Sbjct: 571 KQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGIIGCTQP 630
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLS 278
R++AA+S+A+RV EE GC V F ++K+ YMTD L + + D DL
Sbjct: 631 RRVAAMSVAKRVAEEV-GCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 279 RISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHV 338
+ S I++DEAHER+ RR DLRL++ SAT DA + S+YFY C I +
Sbjct: 690 KYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSI 749
Query: 339 VGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
GR FPV++ Y + Y+ + V ++H TE G +L FLT + E++ ACE
Sbjct: 750 PGRTFPVEIMY------SKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACE 803
Query: 399 ----KFDA-----PSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGV 448
+ A P V LP + L + Q +F + PG RKV+ ATN+AETS+TI +
Sbjct: 804 ILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNI 863
Query: 449 KFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR 508
+VID G VK+ ++P GM+ L V +SQ+ A QRAGRAGRT PG+C+RLY+++ +++
Sbjct: 864 YYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSE 923
Query: 509 PLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
L P+I R +L +L + A+GI D+ FDF+D P + A+ L L A+ +
Sbjct: 924 MLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALD-DE 982
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
G+ LT G+ + +EP L K++++ E L + A M + S+F R +++
Sbjct: 983 GL--LTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVA-MLSIQSVFYR--PKEKQ 1037
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
+AD K +F +GD TLL+VY W N WC+EN + A+ +RR QD ++L
Sbjct: 1038 QQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFS--NAWCYENFIQARQIRRAQDVRQQL 1094
Score = 151 (58.2 bits), Expect = 3.2e-98, Sum P(2) = 3.2e-98
Identities = 48/182 (26%), Positives = 85/182 (46%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
+++ +AD K +F +GD TLL+VY W N WC+EN + A+ +RR QD +
Sbjct: 1035 EKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFS--NAWCYENFIQARQIRRAQDVRQ 1092
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+L +++ I+ N K +++ + + N A Q GY+ +
Sbjct: 1093 QLLGIMQRYHHKIVSCGR--NTTK-------VRQALCTGFFRNSARKD--PQEGYKTLVE 1141
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMM 804
G V +HPS ++ FG+ V++ L+ +Y+ C T + L P+ F V+
Sbjct: 1142 GTPVYMHPSSAM--FGKPAEHVIYHTLVLTTKEYMHCTTGIEPKWLVEAAPT-FFKVAPT 1198
Query: 805 ER 806
+R
Sbjct: 1199 DR 1200
Score = 43 (20.2 bits), Expect = 8.0e-87, Sum P(2) = 8.0e-87
Identities = 17/46 (36%), Positives = 20/46 (43%)
Query: 894 KCLYQGAGV--SPSVALFGAGAEIKHLELERRFLTVDVY-HSNANI 936
K L +G V PS A+FG AE H+ LT Y H I
Sbjct: 1137 KTLVEGTPVYMHPSSAMFGKPAE--HVIYHTLVLTTKEYMHCTTGI 1180
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 843 (301.8 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 200/541 (36%), Positives = 302/541 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP++ +R+++L I Q+L++ GETG GK+TQ+ Q+L + G + I CTQPR++AA
Sbjct: 402 LPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAA 461
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S +
Sbjct: 462 MSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 520
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHER+ R +L++++ SAT D + S +F D + + GR F
Sbjct: 521 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRF 580
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD-- 401
PVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 581 PVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 634
Query: 402 -------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 635 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 694
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 695 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEET 753
Query: 514 --PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N + E
Sbjct: 754 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLGE 810
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + AD
Sbjct: 811 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHAD 868
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE LE
Sbjct: 869 NARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLLE 926
Query: 692 K 692
+
Sbjct: 927 R 927
Score = 155 (59.6 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 862 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 919
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I S + A + + GY
Sbjct: 920 QLEGLLER-VEVGLTSC-------QGDYVR-VRKAITSGYFYHTARLT---RSGYRTVKQ 967
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F Q+P W+++ EL+ +++ V + L + P
Sbjct: 968 QQTVFIHPNSSL--FEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1016
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 842 (301.5 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 200/541 (36%), Positives = 302/541 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP++ +R+++L I Q+L++ GETG GK+TQ+ Q+L + G + I CTQPR++AA
Sbjct: 399 LPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAA 458
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S +
Sbjct: 459 MSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 517
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHER+ R +L++++ SAT D + S +F D + + GR F
Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRF 577
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD-- 401
PVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 578 PVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631
Query: 402 -------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 691
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 692 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEET 750
Query: 514 --PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N + E
Sbjct: 751 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLGE 807
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + AD
Sbjct: 808 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHAD 865
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE LE
Sbjct: 866 NARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLLE 923
Query: 692 K 692
+
Sbjct: 924 R 924
Score = 152 (58.6 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 46/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 859 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 916
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 917 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 964
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F Q+P W+++ EL+ +++ V + L + P
Sbjct: 965 QQTVFIHPNSSL--FEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1013
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 844 (302.2 bits), Expect = 1.7e-97, Sum P(2) = 1.7e-97
Identities = 201/541 (37%), Positives = 302/541 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP++ +R+++L I Q+L++ GETG GK+TQ+ Q+L + G + I CTQPR++AA
Sbjct: 403 LPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAA 462
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S +
Sbjct: 463 MSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHER+ R +L++++ SAT D + S +F D I + GR F
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRF 581
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD-- 401
PVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 582 PVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 402 -------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEET 754
Query: 514 --PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N + E
Sbjct: 755 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLGE 811
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + AD
Sbjct: 812 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHAD 869
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE LE
Sbjct: 870 NARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLLE 927
Query: 692 K 692
+
Sbjct: 928 R 928
Score = 149 (57.5 bits), Expect = 1.7e-97, Sum P(2) = 1.7e-97
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 863 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 920
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 921 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 968
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F ++P W+++ EL+ +++ V + L + P
Sbjct: 969 QQTVFIHPNSSL--FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1017
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 477 SQSSANQRAGRAGRT-EPGRCYRLYSKSDFETRPLNQEPE 515
S+ S+ + GRAG + + R R + + E ++E E
Sbjct: 103 SEESSEETVGRAGSSVQKKRKKRKHLRKKREAEEEDEEEE 142
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 843 (301.8 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 200/541 (36%), Positives = 302/541 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP++ +R+++L + QIL++ GETG GK+TQ+ Q+L + G + I CTQPR++AA
Sbjct: 403 LPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAA 462
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S +
Sbjct: 463 MSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHER+ R +L++++ SAT D + S +F D + + GR F
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRF 581
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD-- 401
PVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 582 PVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 402 -------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEET 754
Query: 514 --PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N + E
Sbjct: 755 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLGE 811
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + AD
Sbjct: 812 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHAD 869
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE LE
Sbjct: 870 NARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLLE 927
Query: 692 K 692
+
Sbjct: 928 R 928
Score = 149 (57.5 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 863 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 920
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 921 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 968
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F ++P W+++ EL+ +++ V + L + P
Sbjct: 969 QQTVFIHPNSSL--FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1017
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 843 (301.8 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 200/541 (36%), Positives = 302/541 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP++ +R+++L + QIL++ GETG GK+TQ+ Q+L + G + I CTQPR++AA
Sbjct: 403 LPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAA 462
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S +
Sbjct: 463 MSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHER+ R +L++++ SAT D + S +F D + + GR F
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRF 581
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD-- 401
PVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 582 PVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 635
Query: 402 -------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 696 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEET 754
Query: 514 --PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N + E
Sbjct: 755 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLGE 811
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + AD
Sbjct: 812 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHAD 869
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE LE
Sbjct: 870 NARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLLE 927
Query: 692 K 692
+
Sbjct: 928 R 928
Score = 149 (57.5 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 863 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 920
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 921 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 968
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F ++P W+++ EL+ +++ V + L + P
Sbjct: 969 QQTVFIHPNSSL--FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1017
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 842 (301.5 bits), Expect = 3.0e-97, Sum P(2) = 3.0e-97
Identities = 200/541 (36%), Positives = 302/541 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP++ +R+++L I Q+L++ GETG GK+TQ+ Q+L + G + I CTQPR++AA
Sbjct: 400 LPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAA 459
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV E G + V F + + YMTD LL+ F+++ DL+ S +
Sbjct: 460 MSVAARVAREM-GVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 518
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHER+ R +L++++ SAT D + S +F D + + GR F
Sbjct: 519 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRF 578
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD-- 401
PVD+ Y A Y+ V V ++H T+ G IL FLT + E+E ACE
Sbjct: 579 PVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 632
Query: 402 -------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G+ +V+D
Sbjct: 633 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 692
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++ L +
Sbjct: 693 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ-HELEET 751
Query: 514 --PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ N + E
Sbjct: 752 TVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NHLGE 808
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D+ + AD
Sbjct: 809 LTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKDKVVHAD 866
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+V F GD LL+VY +W ++WC+EN V +S+RR +D ++LE LE
Sbjct: 867 NARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQLEGLLE 924
Query: 692 K 692
+
Sbjct: 925 R 925
Score = 149 (57.5 bits), Expect = 3.0e-97, Sum P(2) = 3.0e-97
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 860 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 917
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 918 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 965
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F ++P W+++ EL+ +++ V + L + P
Sbjct: 966 QQTVFIHPNSSL--FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1014
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 832 (297.9 bits), Expect = 1.5e-94, Sum P(2) = 1.5e-94
Identities = 201/551 (36%), Positives = 304/551 (55%)
Query: 155 VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSI 213
++E +R LPI+ YR+D+L I QILV+ GETG GK+TQ+ Q+L + G I
Sbjct: 405 IQEVRR---SLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKI 461
Query: 214 VCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFM 272
CTQPR++AA+S+A RV +E ++ + Y F + + YMTD LL+ F+
Sbjct: 462 GCTQPRRVAAMSVAARVAQEMSVKLGNE--VGYSIRFEDCTSERTILKYMTDGMLLREFL 519
Query: 273 NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD 332
+ DL+ S II+DEAHER+ R DL++++ SAT D + S +F D
Sbjct: 520 TEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDD 579
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
+ + GR FPVD+ Y A Y+ V V ++H T+ G +L FLT + E
Sbjct: 580 APVFRIPGRRFPVDIYYTKAPEA------DYLEACVVSVLQIHVTQSPGDVLVFLTGQEE 633
Query: 393 VEWACEKFDA---------PSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETS 442
+E CE + LP + L D Q +F + PG RKV+ ATN+AETS
Sbjct: 634 IEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETS 693
Query: 443 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 502
LTI G+ +VID G K+ + TGM L V S++SANQRAGRAGR G+C+RLY+
Sbjct: 694 LTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTA 753
Query: 503 SDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLG 561
F+ PEI R +LG VL + +LGI D+ FDF+D P + + +A+ L LG
Sbjct: 754 WAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALG 813
Query: 562 AIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRV 621
A+ N + ELT+ G+ + +L ++P L K+IL+ + + E L +AA+++ +SIF R
Sbjct: 814 AL---NHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYR- 869
Query: 622 GSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQD 681
D+ + AD ++ F GD LL+VY +W + +WC+EN + +S++R +D
Sbjct: 870 -PKDKVVHADNARMNFVVPGGDHLVLLNVYTQW--VESGYSTQWCFENFIQFRSMKRARD 926
Query: 682 TIKELETCLEK 692
+LE +++
Sbjct: 927 VRDQLEGLMDR 937
Score = 135 (52.6 bits), Expect = 1.5e-94, Sum P(2) = 1.5e-94
Identities = 40/171 (23%), Positives = 80/171 (46%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD ++ F GD LL+VY +W + +WC+EN + +S++R +D
Sbjct: 872 DKVVHADNARMNFVVPGGDHLVLLNVYTQW--VESGYSTQWCFENFIQFRSMKRARDVRD 929
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE +++ + S P +++ + + + A S + GY+
Sbjct: 930 QLEGLMDRIEVELCSSNGDSMP---------IRKAVTAGYFYHTARLS---KGGYKTVKH 977
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F ++P W+++ EL+ +++ V + L + P
Sbjct: 978 QQTVYVHPNSSL--FEEQPRWMIYHELVFTTKEFMRQVIEIESGWLLEVAP 1026
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 232/674 (34%), Positives = 372/674 (55%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQ 217
K +GLP++ R+ L + QILVL+GETG GK+TQ+ Q+LA+ G ++ ++ CTQ
Sbjct: 504 KEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQ 563
Query: 218 PRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 277
PR++AA+S+A+RV EE GC + V F +++ YMTD L + + D L
Sbjct: 564 PRRVAAMSVAKRVAEEV-GCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLL 622
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
S+ S II+DEAHER+ +R DL+L++ SAT DA + S YFY C I
Sbjct: 623 SKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFT 682
Query: 338 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 397
+ GR++PV++ Y A Y+ + V ++H +E G IL FLT + E++ +C
Sbjct: 683 IPGRSYPVEIMYTK------QPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSC 736
Query: 398 E------KF--DA-PSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPG 447
E K D+ P V LP + L + Q +F+ + PG RKV+ ATN+AETSLTI G
Sbjct: 737 EILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDG 796
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+ +V+D G VK+S F+P GM+ L V +SQ+ A QR+GRAGRT PG+CYRLY++S +
Sbjct: 797 IYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRN 856
Query: 508 RPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLN 566
L PEI R +L +L + A+GI D+ FDF+D P A+ + A++NL L A+ +
Sbjct: 857 EMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALD-D 915
Query: 567 NGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDE 626
G+ LT G+ + +EP+L K++++ E L + A M + +I+ R ++
Sbjct: 916 EGL--LTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIA-MLSVPNIWSR--PREK 970
Query: 627 KIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
+ +AD + QF + D TLL+VY W + R N WC+E+ + A+ +RR +D K+L
Sbjct: 971 QQEADRQRAQFANPESDHLTLLNVYTTW-KMNRCSDN-WCYEHYIQARGMRRAEDVRKQL 1028
Query: 687 ETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAE----NVAMFSGYDQLGYEVA 742
+++ Y H + +E+IL AL NVA ++ Y+
Sbjct: 1029 IRLMDR--------Y----RHPVVSCGR-KRELILRALCSGYFTNVAKRDSHEGC-YKTI 1074
Query: 743 MTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFD 800
+ V +HPS ++FG+ WV++ EL+ + +Y+ V+ + L + P+ +
Sbjct: 1075 VENAPVYMHPSG--VLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFAN 1132
Query: 801 VSMMERKKLHVRVI 814
+ + + K +++V+
Sbjct: 1133 ANQVSKTKKNLKVL 1146
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 809 (289.8 bits), Expect = 4.4e-91, Sum P(2) = 4.4e-91
Identities = 195/544 (35%), Positives = 302/544 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSIVCTQPRKIAA 223
LP+Y +R + + Q+L++ GETG GK+TQL Q+L ++G + I CTQPR++AA
Sbjct: 364 LPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAA 423
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV +E GC V F + + YMTD LL+ F+N+ DL+ S +
Sbjct: 424 MSVAARVADEV-GCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
++DEAHER+ R DL+L+I SAT DA + S +F D I + GR F
Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRF 542
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEVEWACEKFDA 402
PVD+ Y A YV + + ++H T+ G IL FLT + E+E E
Sbjct: 543 PVDIYYTQAPEA------DYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALME 596
Query: 403 PSA---------VALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVI 452
S + LP + L D Q +F+ P RKV+ ATN+AETS+TI G+ +VI
Sbjct: 597 RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVI 656
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYS----KSDFETR 508
D G K++ F+ +G+ L V +S+++ANQRAGRAGRT PG+C+RLY+ K + E +
Sbjct: 657 DPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQ 716
Query: 509 PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNG 568
P+ PEI R +LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ + G
Sbjct: 717 PI---PEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALN-HRG 772
Query: 569 VFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKI 628
ELT+ G+ + + +P + K+I++ + E + +AA+++ +++F R + + I
Sbjct: 773 --ELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKA--QVI 828
Query: 629 KADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELET 688
AD + F GD TL++VY +W +R WC EN V ++++R +D +L
Sbjct: 829 HADSARKGFWSPAGDHITLMNVYNKWQESSFSQR--WCVENYVQHRTMKRARDVRDQLVG 886
Query: 689 CLEK 692
LE+
Sbjct: 887 LLER 890
Score = 128 (50.1 bits), Expect = 4.4e-91, Sum P(2) = 4.4e-91
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELE 687
I AD + F GD TL++VY +W +R WC EN V ++++R +D +L
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQR--WCVENYVQHRTMKRARDVRDQLV 885
Query: 688 TCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQH 747
LE+ + I + T+ K +++ I + NV S D G+ + +H
Sbjct: 886 GLLER---VEIET------KSSTDTIK-IRKAITAGYFYNV---SKLDNTGHYKTVKHKH 932
Query: 748 VQLHPSCSLLIFGQKPTWVVFGELLSVNNQYL 779
HP + +F + P WVV+ EL+ + +++
Sbjct: 933 TT-HPHPNSCLFEETPRWVVYFELVFTSKEFM 963
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 809 (289.8 bits), Expect = 4.4e-91, Sum P(2) = 4.4e-91
Identities = 195/544 (35%), Positives = 302/544 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSIVCTQPRKIAA 223
LP+Y +R + + Q+L++ GETG GK+TQL Q+L ++G + I CTQPR++AA
Sbjct: 364 LPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAA 423
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV +E GC V F + + YMTD LL+ F+N+ DL+ S +
Sbjct: 424 MSVAARVADEV-GCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
++DEAHER+ R DL+L+I SAT DA + S +F D I + GR F
Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRF 542
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEVEWACEKFDA 402
PVD+ Y A YV + + ++H T+ G IL FLT + E+E E
Sbjct: 543 PVDIYYTQAPEA------DYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALME 596
Query: 403 PSA---------VALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVI 452
S + LP + L D Q +F+ P RKV+ ATN+AETS+TI G+ +VI
Sbjct: 597 RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVI 656
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYS----KSDFETR 508
D G K++ F+ +G+ L V +S+++ANQRAGRAGRT PG+C+RLY+ K + E +
Sbjct: 657 DPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQ 716
Query: 509 PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNG 568
P+ PEI R +LG VL + +LGI D+ FDF+D P + + +A+ L LGA+ + G
Sbjct: 717 PI---PEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALN-HRG 772
Query: 569 VFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKI 628
ELT+ G+ + + +P + K+I++ + E + +AA+++ +++F R + + I
Sbjct: 773 --ELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKA--QVI 828
Query: 629 KADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELET 688
AD + F GD TL++VY +W +R WC EN V ++++R +D +L
Sbjct: 829 HADSARKGFWSPAGDHITLMNVYNKWQESSFSQR--WCVENYVQHRTMKRARDVRDQLVG 886
Query: 689 CLEK 692
LE+
Sbjct: 887 LLER 890
Score = 128 (50.1 bits), Expect = 4.4e-91, Sum P(2) = 4.4e-91
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELE 687
I AD + F GD TL++VY +W +R WC EN V ++++R +D +L
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQR--WCVENYVQHRTMKRARDVRDQLV 885
Query: 688 TCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQH 747
LE+ + I + T+ K +++ I + NV S D G+ + +H
Sbjct: 886 GLLER---VEIET------KSSTDTIK-IRKAITAGYFYNV---SKLDNTGHYKTVKHKH 932
Query: 748 VQLHPSCSLLIFGQKPTWVVFGELLSVNNQYL 779
HP + +F + P WVV+ EL+ + +++
Sbjct: 933 TT-HPHPNSCLFEETPRWVVYFELVFTSKEFM 963
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 890 (318.4 bits), Expect = 1.9e-90, Sum P(2) = 1.9e-90
Identities = 226/660 (34%), Positives = 348/660 (52%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPIY + D+++ I +L++IGETG GK+TQ+ Q+L ++ + + CTQPR++AA+
Sbjct: 631 LPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAM 690
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
S+A+RV EE GC V F D+ + Y+TD LL+ ++D L++ S II
Sbjct: 691 SIAKRVSEEF-GCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFII 749
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
+DEAHER+ +R D +L++ SAT DA + S YF++ I + G+ FP
Sbjct: 750 LDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFP 809
Query: 345 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE------ 398
V++ + + YV + V +H E G IL FLT + E+ ACE
Sbjct: 810 VEILH------SKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERM 863
Query: 399 -KFDA---PSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
K ++ P + LP + L + Q +F+ + PG RK I ATN+AE SLTI G+ FVID
Sbjct: 864 KKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVID 923
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K ++ M+ L V +S+++A QRAGRAGRT PG+CYRLY++ ++
Sbjct: 924 PGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMS 983
Query: 514 -PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFEL 572
PEI R++LG VL + ALGI D FDF+D+PS + + ++ NL LGA+ +NG L
Sbjct: 984 VPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALD-DNGY--L 1040
Query: 573 TEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADC 632
T+ GK + +EP L K++L+ + +V M + +IF R ++ + AD
Sbjct: 1041 TKLGKKMANFPMEPNLSKILLTSLNFNC-TDDVVTIVSMLSVQNIFYR--PQNKALLADK 1097
Query: 633 LKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEK 692
K +F GDL T L++Y +W N WC EN + +++L+R QD K++ + EK
Sbjct: 1098 KKNKFIMPQGDLITYLNIYNKWKE--NSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEK 1155
Query: 693 ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHP 752
+ S + + T+Y K I S +V Q GY +T Q V +HP
Sbjct: 1156 YNYQVKKST---SKNDATKYVNICKSIC-SGYFNHVCKRD--TQQGYTTLLTNQQVFIHP 1209
Query: 753 SCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVR 812
S +L F + P +VV+ EL+ N +Y+ T L L P+ + K+ +R
Sbjct: 1210 SSTL--FNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLR 1267
Score = 39 (18.8 bits), Expect = 1.9e-90, Sum P(2) = 1.9e-90
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 192 CGKSTQLVQFLAD---SGIAAEQSIV 214
C KST L +F D +G EQ+++
Sbjct: 36 CEKSTSLEEFCKDVFENGGVIEQAVL 61
Score = 37 (18.1 bits), Expect = 3.0e-90, Sum P(2) = 3.0e-90
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 25 VPSDADELEERLRNLFVDHVKGLMEGELVNK 55
+ D ++L+++ N+F D K ++ E V K
Sbjct: 430 INEDFNDLKKKNANVFKDDPKETLKYESVIK 460
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 890 (318.4 bits), Expect = 1.9e-90, Sum P(2) = 1.9e-90
Identities = 226/660 (34%), Positives = 348/660 (52%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPIY + D+++ I +L++IGETG GK+TQ+ Q+L ++ + + CTQPR++AA+
Sbjct: 631 LPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAM 690
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
S+A+RV EE GC V F D+ + Y+TD LL+ ++D L++ S II
Sbjct: 691 SIAKRVSEEF-GCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFII 749
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
+DEAHER+ +R D +L++ SAT DA + S YF++ I + G+ FP
Sbjct: 750 LDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFP 809
Query: 345 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE------ 398
V++ + + YV + V +H E G IL FLT + E+ ACE
Sbjct: 810 VEILH------SKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERM 863
Query: 399 -KFDA---PSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVID 453
K ++ P + LP + L + Q +F+ + PG RK I ATN+AE SLTI G+ FVID
Sbjct: 864 KKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVID 923
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
G K ++ M+ L V +S+++A QRAGRAGRT PG+CYRLY++ ++
Sbjct: 924 PGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMS 983
Query: 514 -PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFEL 572
PEI R++LG VL + ALGI D FDF+D+PS + + ++ NL LGA+ +NG L
Sbjct: 984 VPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALD-DNGY--L 1040
Query: 573 TEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADC 632
T+ GK + +EP L K++L+ + +V M + +IF R ++ + AD
Sbjct: 1041 TKLGKKMANFPMEPNLSKILLTSLNFNC-TDDVVTIVSMLSVQNIFYR--PQNKALLADK 1097
Query: 633 LKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEK 692
K +F GDL T L++Y +W N WC EN + +++L+R QD K++ + EK
Sbjct: 1098 KKNKFIMPQGDLITYLNIYNKWKE--NSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEK 1155
Query: 693 ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHP 752
+ S + + T+Y K I S +V Q GY +T Q V +HP
Sbjct: 1156 YNYQVKKST---SKNDATKYVNICKSIC-SGYFNHVCKRD--TQQGYTTLLTNQQVFIHP 1209
Query: 753 SCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVR 812
S +L F + P +VV+ EL+ N +Y+ T L L P+ + K+ +R
Sbjct: 1210 SSTL--FNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKKISKIKLR 1267
Score = 39 (18.8 bits), Expect = 1.9e-90, Sum P(2) = 1.9e-90
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 192 CGKSTQLVQFLAD---SGIAAEQSIV 214
C KST L +F D +G EQ+++
Sbjct: 36 CEKSTSLEEFCKDVFENGGVIEQAVL 61
Score = 37 (18.1 bits), Expect = 3.0e-90, Sum P(2) = 3.0e-90
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 25 VPSDADELEERLRNLFVDHVKGLMEGELVNK 55
+ D ++L+++ N+F D K ++ E V K
Sbjct: 430 INEDFNDLKKKNANVFKDDPKETLKYESVIK 460
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 212/554 (38%), Positives = 317/554 (57%)
Query: 156 RECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVC 215
R K + LPI+ R+ L+ + Q+LV+IGETG GK+TQ+ Q+LA++G I C
Sbjct: 499 RSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGC 558
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+S+++RV EE GC V F ++ + +MTD LL+ + D
Sbjct: 559 TQPRRVAAMSVSKRVAEEF-GCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDP 617
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
+LS S II+DEAHER+ RR +L+++I SAT +A + SKYF + +
Sbjct: 618 NLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQL 677
Query: 336 SHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 395
+ GR FPVD+RY A Y+ + V ++H +E G IL FLT + E++
Sbjct: 678 FIIPGRTFPVDIRYTK------DPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDA 731
Query: 396 AC----EKF-----DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTI 445
AC E+ + P + LP + L + Q +F+ + PG RKV+ ATN+AETSLTI
Sbjct: 732 ACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTI 791
Query: 446 PGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF 505
G+ +VID G K+ F P GM+ L V +SQ++A QR+GRAGRT PG+CYRLY++S F
Sbjct: 792 DGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAF 851
Query: 506 ETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+ L PEI R +LG VL + A+GI D+ FDF+D P + + A+ L LGA+
Sbjct: 852 KNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALD 911
Query: 565 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSD 624
G+ LT G+ + + ++P+L K++++ E L + A M + ++F R
Sbjct: 912 -EEGL--LTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVA-MLSVQNVFYR--PK 965
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
+++ AD K +F GD TLL+VY W + + N WC+EN V A+SLRR QD K
Sbjct: 966 EKQALADQKKAKFFQPEGDHLTLLNVYESWKN--SKFSNPWCFENFVQARSLRRAQDVRK 1023
Query: 685 ELETCLEK-ELAII 697
+L T +++ +L II
Sbjct: 1024 QLITIMDRYKLDII 1037
Score = 206 (77.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
+++ AD K +F GD TLL+VY W + + N WC+EN V A+SLRR QD K
Sbjct: 966 EKQALADQKKAKFFQPEGDHLTLLNVYESWKN--SKFSNPWCFENFVQARSLRRAQDVRK 1023
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+L T +++ II + YT+ K I S N + + GY+ +
Sbjct: 1024 QLITIMDRYKLDIISA-----GRNYTKIQK----AICSGFFANASKKDPNE--GYKTLVE 1072
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
GQ V +HPS +L F + P WV++ EL+ +Y+ V D L L P
Sbjct: 1073 GQPVYIHPSSTL--FNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAP 1121
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 200/535 (37%), Positives = 305/535 (57%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPIY ++ +++ ++ QIL++IGETG GK+TQ+ Q+LA++G + I CTQPR++A
Sbjct: 563 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 622
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F ++ + YMTD LL+ + D DL++ +
Sbjct: 623 AMSVAKRVSEEF-GCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAI 681
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R D++L++ SAT DA + S+YFY+ I + GR
Sbjct: 682 IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRT 741
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV++ Y Y+ + V ++H TE G IL FLT + E++ ACE
Sbjct: 742 YPVEILYTK------EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYE 795
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP + L + Q +F + PG RKV+ ATN+AETSLTI G+ +V+
Sbjct: 796 RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV 855
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
D G VK+ + TG++ L V +SQ+ A QRAGRAGRT PG+CYRLY++ + L
Sbjct: 856 DPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT 915
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + A+GI D+ FDF+DAP + + A+ L LGA+ + G+
Sbjct: 916 NVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD-DEGL-- 972
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + + +EP L K+++ E L + + M + ++F R D++ AD
Sbjct: 973 LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALAD 1029
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K +F GD TLL+VY W + + N WC+EN + A+SLRR QD K++
Sbjct: 1030 QKKAKFHQTEGDHLTLLAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQM 1082
Score = 183 (69.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 63/236 (26%), Positives = 106/236 (44%)
Query: 528 ILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
+L+L + D A +E I + QL + + LT G+ + + +EP
Sbjct: 929 VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM 988
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
L K+++ E L + + M + ++F R D++ AD K +F GD TL
Sbjct: 989 LCKMLIMSVHLGCSEEMLTIVS-MLSVQNVFYR--PKDKQALADQKKAKFHQTEGDHLTL 1045
Query: 648 LSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPH 707
L+VY W + + N WC+EN + A+SLRR QD K++ +++ ++
Sbjct: 1046 LAVYNSWKN--NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSC------G 1097
Query: 708 KYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKP 763
K T +++ I S N A Q GY + Q V +HPS +L F ++P
Sbjct: 1098 KSTVR---VQKAICSGFFRNAAKKD--PQEGYRTLIDQQVVYIHPSSAL--FNRQP 1146
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 844 (302.2 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 194/541 (35%), Positives = 311/541 (57%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP+Y +++D++ + Q+L++ GETG GK+TQ+ Q+L ++G ++ ++ CTQPR++AA
Sbjct: 252 LPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAA 311
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV EE G + V F + + YMTD L + F+++ DL+ S +
Sbjct: 312 MSVAARVAEEM-GVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVM 370
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
I+DEAHER+ R +L+L+I SAT DA + S +F D I + GR +
Sbjct: 371 IIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRY 430
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--- 400
PVD+ Y A Y+ V ++H T+ G IL FLT + E+E C++
Sbjct: 431 PVDIFYTKAPEA------DYIDACCVSVLQIHATQPLGDILVFLTGQDEIE-TCQEVLHD 483
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
+ +P + L D Q +F+ + P RKVI ATN+AETSLTI + +VI
Sbjct: 484 RVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVI 543
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLN 511
D G K++ F TGM L V +S++SANQRAGRAGRT PG+C+RLY+ ++ N
Sbjct: 544 DPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDN 603
Query: 512 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R++LG AVL + ALGI D+ FDF+D P + + +A+ L LGA+ ++G E
Sbjct: 604 TVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN-HHG--E 660
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT+ G+ + + ++P +GK++L+ + + E + +AA+++ S+IF R D+ I AD
Sbjct: 661 LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYR--PKDKIIHAD 718
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+ F H +GD +LL VY +W + +WC+EN + +S++R +D ++L ++
Sbjct: 719 TARKNFNHMHGDHLSLLQVYNQWAET--DYSTQWCYENFIQYRSMKRARDVREQLVGLMQ 776
Query: 692 K 692
+
Sbjct: 777 R 777
Score = 148 (57.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREER 662
E +V A M + +S D+ I AD + F H +GD +LL VY +W +
Sbjct: 691 EEMVTIAAMLSVNSAIF-YRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAET--DYS 747
Query: 663 NKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILS 722
+WC+EN + +S++R +D ++L +++ + I + S P +++ +
Sbjct: 748 TQWCYENFIQYRSMKRARDVREQLVGLMQR-VEIDMVSCL---PETVN-----VRKAATA 798
Query: 723 ALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCV 782
+VA S Y+ Q V +HP+ SL F + P WV++ EL+ + +Y+ V
Sbjct: 799 GYFYHVARLSKGGH--YKTIKHNQTVMIHPNSSL--FEELPRWVLYHELVFTSKEYMRQV 854
Query: 783 TAFDFDSLSTLCP 795
+ L + P
Sbjct: 855 IEIESKWLLEVAP 867
Score = 37 (18.1 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 18 KLIPHVVVPSDADELEER 35
K++PH+ + S LE+R
Sbjct: 77 KIVPHLRLQSRRQYLEKR 94
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 856 (306.4 bits), Expect = 1.9e-85, P = 1.9e-85
Identities = 217/629 (34%), Positives = 337/629 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LPIY +R I++ ++ Q+L+++GETG GK+TQL Q+L ++G + CTQPR++AA
Sbjct: 481 LPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQPRRVAA 540
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+S+A RV EE G + V F + + YMTD LL+ + + DL + S +
Sbjct: 541 MSVAARVAEEM-GVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSAL 599
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
++DEAHER+ R DL+L+I SAT DA + YF + I ++ GR +
Sbjct: 600 MIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMY 659
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDA- 402
VD+ Y A+Y++ + V ++H ++ G IL FLT + E+E A +
Sbjct: 660 NVDIHYTQ------QPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQET 713
Query: 403 --------PSAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTIPGVKFVID 453
P + P + L D Q +F+ P + RKV+ ATN+AETSLTI G+ +VID
Sbjct: 714 ARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVID 773
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK-SDFETRPLNQ 512
G VKE+ F P TGM L V S++SANQRAGRAGR PG+C+RLY+K + + +
Sbjct: 774 PGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEEST 833
Query: 513 EPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFEL 572
PEI R +L +L + +LGI + FDF+D P A+ I A+ L LGA+ + G EL
Sbjct: 834 TPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALN-DRG--EL 890
Query: 573 TEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADC 632
T+ G+ + + +P L K IL+ + E L + +++ AS++F R D+KI AD
Sbjct: 891 TKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFR--PKDKKIHADS 948
Query: 633 LKVQFCHRNG-DLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+ +F ++G D TLL+++ +W + + W EN + +SL R +D +L +
Sbjct: 949 ARNRFTVKDGGDHLTLLNIWNQW--VDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCD 1006
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFS-GYDQLGYEVAMTGQHVQL 750
+ + + + S N +++ I + N A G D Y TGQ V L
Sbjct: 1007 R-VEVTVSSCGSNNIVP-------IQKAITAGFFPNAARLQRGGDS--YRTIKTGQTVYL 1056
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYL 779
HPS +L F P WV++ EL+ + +Y+
Sbjct: 1057 HPSSTL--FEVNPRWVIYFELVLTSKEYM 1083
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 855 (306.0 bits), Expect = 2.5e-85, P = 2.5e-85
Identities = 224/662 (33%), Positives = 347/662 (52%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LPIY+YR + L + QILV++GETG GK+TQL Q+L ++G + + CTQPR++AA
Sbjct: 373 LPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCTQPRRVAA 432
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVI--YMTDHCLLQHFMNDRDLSRIS 281
+S+A RV +E G + V Y S + K I YMTD LL+ FM + DLS S
Sbjct: 433 MSVAARVADEM-GVKVGNEV-GY-SIRFEDNTSDKTILKYMTDGMLLREFMTEPDLSSYS 489
Query: 282 CIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 341
+++DEAHER+ R DL+L+I SAT +A + + YF D I ++ GR
Sbjct: 490 ALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAPIFNIPGR 549
Query: 342 NFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWA----- 396
+PVD+ Y P A +Y+S + V ++HTT+ +G IL FLT + E+E A
Sbjct: 550 RYPVDIYYTPAPEA------NYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAEMQIT 603
Query: 397 --CEKFDA--PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFV 451
K + V P + L + Q +F+ P RKV+ ATN+AETSLTI G+ +V
Sbjct: 604 ETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYV 663
Query: 452 IDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PL 510
ID G VKE+ + P TGM+ L V S++SANQR+GRAGR PG+C+RLY+K +
Sbjct: 664 IDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEE 723
Query: 511 NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVF 570
+ PEI R +L VL++ +LGI ++ F+F+D P +A+ A+ L L + + G
Sbjct: 724 STTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLN-HKG-- 780
Query: 571 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 630
ELT+ G+ + + +P L K +L+ + E L + A+++ AS++F R D+++ A
Sbjct: 781 ELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFR--PKDKQVHA 838
Query: 631 DCLKVQFCHRNG-DLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETC 689
D + +F + G D TLL+++ +W L + W EN + +SL R +D ++L
Sbjct: 839 DAARGRFTVKEGGDHVTLLNIWNQW--LDSDYSPIWSKENFLQQRSLTRARDVREQLSKL 896
Query: 690 LEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQ 749
E+ + + N +K I + N A Y V
Sbjct: 897 CERVEVTLSTCGGISNMPP-------IKRAITAGFFPNAARMQRSGD-SYRTVKNNTTVY 948
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFDVSMMERK 807
+HPS ++ P V++ EL+ +Y+ + L+ L P D++ +E K
Sbjct: 949 IHPSSVMMQEDPPPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDIAALEEK 1008
Query: 808 KL 809
KL
Sbjct: 1009 KL 1010
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 834 (298.6 bits), Expect = 1.5e-84, Sum P(2) = 1.5e-84
Identities = 197/553 (35%), Positives = 305/553 (55%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQP 218
+ + LP+Y YR+ ++ + Q+L+++GETG GK+TQ+ Q+L ++G + I CTQP
Sbjct: 461 QEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQP 520
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLS 278
R++AA+S+A RV EE GC + V F + + YMTD L++ F+ DL+
Sbjct: 521 RRVAAMSVAARVAEEV-GCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLA 579
Query: 279 RISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHV 338
S +I+DEAHER+ R DL+L+I SAT DA + S YF ++
Sbjct: 580 SYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNI 639
Query: 339 VGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
GR + V Y A Y+ V V ++H TE G IL FLT + EV+ A E
Sbjct: 640 PGRKYEVTTHYTQAPEA------DYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAE 693
Query: 399 KFDAPSA---------VALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGV 448
+ + + L D Q +F+ + P RKV+ ATN+AETSLTI G+
Sbjct: 694 MLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGI 753
Query: 449 KFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR 508
+VID G K+ F P TGM L + VS++SANQR GRAGR PG+C+RL++ F+
Sbjct: 754 IYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNE 813
Query: 509 -PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
N PEI R +LG VL + ++GI D+ FDF+D P A+ + A+ L LGA+ +
Sbjct: 814 LEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALN-DR 872
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
G +LT+ G+ + + ++P+L K+I++ + + E L + A+++ ++IF R D+
Sbjct: 873 G--QLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYR--PKDKA 928
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN--KWCWENSVNAKSLRRCQDTIKE 685
AD + F H GD TL++V+ +W RE +WC+EN + +S++R QD +
Sbjct: 929 FAADAARKLFFHPQGDHLTLMNVFNQW----RESGYAVQWCFENFIQHRSMKRAQDVRDQ 984
Query: 686 LETCLEK-ELAII 697
LE LE+ E+ ++
Sbjct: 985 LELLLERVEIPLV 997
Score = 162 (62.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 51/188 (27%), Positives = 85/188 (45%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN--KWCWENSVNAKSLRRCQDT 682
D+ AD + F H GD TL++V+ +W RE +WC+EN + +S++R QD
Sbjct: 926 DKAFAADAARKLFFHPQGDHLTLMNVFNQW----RESGYAVQWCFENFIQHRSMKRAQDV 981
Query: 683 IKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLG-YEV 741
+LE LE+ + IP + D +++ I S N A ++ G +
Sbjct: 982 RDQLELLLER---VEIPLV-----SNVDDTDS-IRKCIASGFFYNSAKL---EKSGLFRT 1029
Query: 742 AMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDV 801
Q VQ+HPS L F P WVV+ EL+ +++ + L + P +
Sbjct: 1030 TKHNQSVQIHPSSCL--FQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEK 1087
Query: 802 SMMERKKL 809
+ + +KL
Sbjct: 1088 DVNDNQKL 1095
Score = 38 (18.4 bits), Expect = 1.5e-84, Sum P(2) = 1.5e-84
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 54 NKWLKMKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKERE 98
NK K+ D D+I N S GS +S + E +KK KE++
Sbjct: 109 NKSYKLVIDHDDDIVNSS---GSSDSDSD-SERKRKKKEKKKEKK 149
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 847 (303.2 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 210/606 (34%), Positives = 324/606 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSIVCTQPRKIAA 223
LP+Y Y+ D+L+ I Q+L+++ ETG GK+TQL QFL ++G + I CTQPR++AA
Sbjct: 418 LPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAA 477
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+S+A RV +E + + Y F +A + + Y+TD LL+ F+ + DL+ S
Sbjct: 478 MSVAARVAKEMDVRLGQE--VGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSV 535
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
II+DEAHER+ R DL+++I SAT DA + S YF + + +V GR
Sbjct: 536 IIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDA 402
+PVD+ Y P A+Y+ + + ++HTT+ G IL FLT + E+E E
Sbjct: 596 YPVDIYYTP------QPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 403 ---------PSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPGVKFVI 452
P + P + L + Q +F + PG RKV+ ATN+AETS+TI GV FVI
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVI 709
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLN 511
DSG VK++ + P TGM L S++SA+QRAGRAGR PG+C+RLY++ + +
Sbjct: 710 DSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMV 769
Query: 512 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L VL + +LGI ++ FDF+DAP + + ++ L LGA+ N G E
Sbjct: 770 TSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALN-NRG--E 826
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT+ G+ + + +P L K +++ + E L + +++ ASS+F R D+ ++AD
Sbjct: 827 LTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYR--PKDKIMEAD 884
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
+ F GD TLL ++ EW + + W EN + KSL R +D +L E
Sbjct: 885 KARANFTQPGGDHLTLLHIWNEW--VDTDFSYNWARENFLQYKSLCRARDVRDQLANLCE 942
Query: 692 K-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 750
+ E+ ++ S +P +K+ I + N A Y + Q V +
Sbjct: 943 RVEIELVTNSSESLDP---------IKKAITAGYFSNAARLDRSGD-SYRTVKSNQTVYI 992
Query: 751 HPSCSL 756
HPS S+
Sbjct: 993 HPSSSV 998
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 857 (306.7 bits), Expect = 5.4e-84, P = 5.4e-84
Identities = 197/547 (36%), Positives = 307/547 (56%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPI+ +++++ + QILV++GETG GK+TQ+ Q+ ++G+ I CTQPR++A
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVA 597
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F D+ + YMTD LL+ + D DLS S
Sbjct: 598 AMSVAKRVAEEY-GCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSL 656
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R +L+L+I SAT D+ + S+YF + I + GR
Sbjct: 657 IMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRT 716
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
FPV++ Y + Y+ V ++H TE G +L FLT + E++ +CE
Sbjct: 717 FPVEILYT------REPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYE 770
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP +G L + Q +F P G+RKV+ ATN+AETSLTI G+ +V+
Sbjct: 771 RMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVV 830
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-N 511
D G VK+ + P +GM+ L V +SQ++A QR+GRAGRT PG+CYRLY++ F L
Sbjct: 831 DPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPT 890
Query: 512 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L +L++ A+GI ++ FDF+DAP ++ A+ L L A+ +G+
Sbjct: 891 PVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALD-GDGL-- 947
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT+ G+ + + +EP L KL++ E L + A M N +IF R +++ AD
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVA-MLNVQNIFYR--PKEKQDHAD 1004
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
K +F GD TLL+VY W + WC+EN + +S++R QD K+L ++
Sbjct: 1005 QKKAKFHQPEGDHLTLLAVYNSWKN--HHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMD 1062
Query: 692 KELAIII 698
+ +++
Sbjct: 1063 RHKLLMV 1069
Score = 184 (69.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 630 ADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETC 689
AD K +F GD TLL+VY W + WC+EN + +S++R QD K+L
Sbjct: 1003 ADQKKAKFHQPEGDHLTLLAVYNSWKN--HHFSQPWCFENFIQVRSMKRAQDIRKQLLGI 1060
Query: 690 LEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQ 749
+++ +++ + + +++ I S N A Q GY GQ+V
Sbjct: 1061 MDRHKLLMVSCG--------RDVSR-VQKAICSGFFRNAAKRD--PQEGYRTLTDGQNVY 1109
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 796
+HPS + F Q+P WVV+ EL+ +Y+ VTA D L PS
Sbjct: 1110 IHPSSAC--FQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPS 1154
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 857 (306.7 bits), Expect = 5.4e-84, P = 5.4e-84
Identities = 197/547 (36%), Positives = 307/547 (56%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+ LPI+ +++++ + QILV++GETG GK+TQ+ Q+ ++G+ I CTQPR++A
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVA 597
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A+S+A+RV EE GC V F D+ + YMTD LL+ + D DLS S
Sbjct: 598 AMSVAKRVAEEY-GCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSL 656
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I++DEAHER+ +R +L+L+I SAT D+ + S+YF + I + GR
Sbjct: 657 IMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRT 716
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
FPV++ Y + Y+ V ++H TE G +L FLT + E++ +CE
Sbjct: 717 FPVEILYT------REPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYE 770
Query: 401 -------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVI 452
D P + LP +G L + Q +F P G+RKV+ ATN+AETSLTI G+ +V+
Sbjct: 771 RMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVV 830
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-N 511
D G VK+ + P +GM+ L V +SQ++A QR+GRAGRT PG+CYRLY++ F L
Sbjct: 831 DPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPT 890
Query: 512 QEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R +L +L++ A+GI ++ FDF+DAP ++ A+ L L A+ +G+
Sbjct: 891 PVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALD-GDGL-- 947
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT+ G+ + + +EP L KL++ E L + A M N +IF R +++ AD
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVA-MLNVQNIFYR--PKEKQDHAD 1004
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
K +F GD TLL+VY W + WC+EN + +S++R QD K+L ++
Sbjct: 1005 QKKAKFHQPEGDHLTLLAVYNSWKN--HHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMD 1062
Query: 692 KELAIII 698
+ +++
Sbjct: 1063 RHKLLMV 1069
Score = 184 (69.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 630 ADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETC 689
AD K +F GD TLL+VY W + WC+EN + +S++R QD K+L
Sbjct: 1003 ADQKKAKFHQPEGDHLTLLAVYNSWKN--HHFSQPWCFENFIQVRSMKRAQDIRKQLLGI 1060
Query: 690 LEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQ 749
+++ +++ + + +++ I S N A Q GY GQ+V
Sbjct: 1061 MDRHKLLMVSCG--------RDVSR-VQKAICSGFFRNAAKRD--PQEGYRTLTDGQNVY 1109
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 796
+HPS + F Q+P WVV+ EL+ +Y+ VTA D L PS
Sbjct: 1110 IHPSSAC--FQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPS 1154
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 760 (272.6 bits), Expect = 1.0e-83, Sum P(2) = 1.0e-83
Identities = 193/551 (35%), Positives = 298/551 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI+ R +L ++ VLIGETG GK+TQ+ Q+L + GI + I TQPR++AAI
Sbjct: 81 LPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVTQPRRVAAI 140
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
SLA RV +E R E ++ Y F D+K+ ++TD LL+ ++D L + SCI
Sbjct: 141 SLATRVSDEKRT--ELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLLRKYSCI 198
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDL-----RLVIMSATADAHQLSKYFYDCGISHV 338
I+DEAHER+ RR +L ++++MSAT D S+YF + ++
Sbjct: 199 ILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGAPVLYL 258
Query: 339 VGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEG-TILAFLTSKMEVEW-- 395
GR P+ + Y Y+ + V ++H IL FLT + E+E
Sbjct: 259 EGRQHPIQIFYTK------QPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAMS 312
Query: 396 -ACEKF-----DA-PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPG 447
C D PS + LP + L + +Q VF+ P G RKVI +TN+AETS+TI G
Sbjct: 313 KTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITG 372
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+K+V+D+GMVK + P +G+ VL V RVS++ A QR GRAGR + G CYRLY++ +FE
Sbjct: 373 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK 432
Query: 508 RPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
PEI R +L +L++LA+ I +V FDF+ PS I+ AI L LGA++ +
Sbjct: 433 FEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHRD 492
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
G LT G+ + +EP+ K IL + E L + A+++ SI S ++
Sbjct: 493 GQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLS-VDSILYNPPSRRDE 551
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL- 686
+++ ++ +F GD TLL+VYR + + + +WC EN VN+K++ + +L
Sbjct: 552 VQS--VRKKFVSSEGDHLTLLNVYRTFKNTGGNK--EWCKENFVNSKNMMLVAEVRAQLR 607
Query: 687 ETCLEKELAII 697
+ C++ + I+
Sbjct: 608 DICIKMSMPIV 618
Score = 111 (44.1 bits), Expect = 1.0e-83, Sum P(2) = 1.0e-83
Identities = 42/153 (27%), Positives = 73/153 (47%)
Query: 633 LKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLE 691
++ +F GD TLL+VYR + + + +WC EN VN+K++ + +L + C++
Sbjct: 555 VRKKFVSSEGDHLTLLNVYRTFKNTGGNK--EWCKENFVNSKNMMLVAEVRAQLRDICIK 612
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 751
+ I+ + TE ++ + +L + A D Y T Q V +H
Sbjct: 613 MSMPIV-------SSRGDTES---IRRCLAHSLFTSTAELQP-DG-SYATTDTHQPVAIH 660
Query: 752 PSCSLLIFGQKPTWVVFGELLSVNNQYL--VCV 782
PS ++F KP VV+ ELL + Y+ +CV
Sbjct: 661 PSS--VLFHCKPACVVYTELLFTSKCYMRDLCV 691
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 826 (295.8 bits), Expect = 1.1e-83, Sum P(2) = 1.1e-83
Identities = 199/547 (36%), Positives = 306/547 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP + R+D+LR I Q++V++GETG GK+TQL QFL + G A I CTQPR++AA+
Sbjct: 188 LPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRRVAAM 247
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A+RV EE D ++ Y F ++ + YMTD LL+ + DL + SCI
Sbjct: 248 SVAKRVSEEMEVDLGD--LVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQTDLDKYSCI 305
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
I+DEAHER+ RR DL+L++ SAT +A + S++F + GR F
Sbjct: 306 IMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTF 365
Query: 344 PVDVRY--VPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE--- 398
PVDV + PC YV V+ V +H ++ G IL F+T + ++E CE
Sbjct: 366 PVDVHFSRTPCE--------DYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVD 417
Query: 399 ---KF--DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVI 452
K D P LP + Q+ ++Q +F ++ PG RKVI ATN+AETSLT+ G+ FV+
Sbjct: 418 ERLKLLNDPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVV 477
Query: 453 DSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ 512
DSG K + P GM+ L++ +SQ++ANQR+GRAGRT PG+ YRLY++ ++ Q
Sbjct: 478 DSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQ 537
Query: 513 E-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFE 571
PEI R L VL + +LG++D+ FDF+D P + I ++ L LGA+ N G +
Sbjct: 538 TIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALD-NLG--D 594
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ + ++P L KLI++ + E ++ M + ++F R E+ +D
Sbjct: 595 LTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEE--SD 652
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCL 690
+ +F D TLL VY +W S + WC ++ ++AK+LRR ++ +L + +
Sbjct: 653 AAREKFFVPESDHLTLLHVYTQWKSNGYSDH--WCTKHFLHAKTLRRAKEVRDQLNDIMV 710
Query: 691 EKELAII 697
++L +I
Sbjct: 711 MQKLPLI 717
Score = 177 (67.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 56/231 (24%), Positives = 109/231 (47%)
Query: 556 NLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 615
+L +L ++ + + +LT G+ + ++P L KLI++ + E ++ M +
Sbjct: 579 SLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVP 638
Query: 616 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 675
++F R E+ +D + +F D TLL VY +W S + WC ++ ++AK+
Sbjct: 639 NVFYRPKERQEE--SDAAREKFFVPESDHLTLLHVYTQWKSNGYSDH--WCTKHFLHAKT 694
Query: 676 LRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYD 735
LRR ++ +L + + +I T++D+ +++ I S A G
Sbjct: 695 LRRAKEVRDQLNDIMVMQKLPLISCG--------TDWDE-IRKCICSGFYHQAARVKGIG 745
Query: 736 QLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFD 786
+ + T + LHP+ +L G P +VV+ EL+ + +Y+ VTA D
Sbjct: 746 E--FINLRTSVSMALHPTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVD 794
Score = 39 (18.8 bits), Expect = 1.1e-83, Sum P(2) = 1.1e-83
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 904 PSVALFGAGAEIKHLELERRFLTVDVYHSNANILD 938
P+ AL+G G +++ LT Y S +D
Sbjct: 760 PTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVD 794
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 761 (272.9 bits), Expect = 1.3e-83, Sum P(2) = 1.3e-83
Identities = 194/561 (34%), Positives = 299/561 (53%)
Query: 156 RECKRLED-GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV 214
RE L+ LPI+ R +L ++ VLIGETG GK+TQ+ Q+L + GI+ + I
Sbjct: 55 REALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIA 114
Query: 215 CTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMN 273
TQPR++AAISLA RV +E R E ++ Y F D+++ ++TD LL+ ++
Sbjct: 115 VTQPRRVAAISLATRVSDEKRT--ELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAIS 172
Query: 274 DRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDL-----RLVIMSATADAHQLSK 328
D L + SC+I+DEAHER+ RR +L ++++MSAT D S+
Sbjct: 173 DSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQ 232
Query: 329 YFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGT-ILAFL 387
YF + ++ GR P+ + Y Y+ + V ++H IL FL
Sbjct: 233 YFNRAPVLYLEGRQHPIQIFYTK------QPQQDYLHAALVSVFQIHQEAPASQDILVFL 286
Query: 388 TSKMEVEW---ACEKF-----DA-PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATN 437
T + E+E C D PS + LP + L + +Q VF+ P G RKVI +TN
Sbjct: 287 TGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTN 346
Query: 438 VAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCY 497
+AETS+TI G+K+V+D+GMVK + P +G+ VL V RVS++ A QR GRAGR + G CY
Sbjct: 347 IAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICY 406
Query: 498 RLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
RLY++ +FE PEI R +L +L++LA+ + +V FDF+ PS IE AI L
Sbjct: 407 RLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQL 466
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
LGA++ + LT G+ + +EPR K IL + E L + ++++ S +
Sbjct: 467 DLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVL 526
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
+ DE ++ +F GD TLL++YR + ++ + WC EN VN+K++
Sbjct: 527 YNPPARRDE---VQSVRKKFISSEGDHITLLNIYRTFKNIGGNK--DWCKENFVNSKNML 581
Query: 678 RCQDTIKEL-ETCLEKELAII 697
+ +L E CL+ + I+
Sbjct: 582 LVAEVRAQLREICLKMSMPIM 602
Score = 109 (43.4 bits), Expect = 1.3e-83, Sum P(2) = 1.3e-83
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 633 LKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLE 691
++ +F GD TLL++YR + ++ + WC EN VN+K++ + +L E CL+
Sbjct: 539 VRKKFISSEGDHITLLNIYRTFKNIGGNK--DWCKENFVNSKNMLLVAEVRAQLREICLK 596
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQH--VQ 749
+ I+ + D E + +A ++ M + Q A T H V
Sbjct: 597 MSMPIMS-----------SRGDM---ESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVA 642
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYL--VCV 782
+HPS ++F KP VV+ LL N Y+ +CV
Sbjct: 643 IHPSS--VLFHCKPACVVYTSLLYTNKCYMRDLCV 675
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 748 (268.4 bits), Expect = 1.4e-82, Sum P(2) = 1.4e-82
Identities = 189/550 (34%), Positives = 296/550 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI+ R +L ++ VLIGETG GK+TQ+ Q+L + GI+ + I TQPR++AAI
Sbjct: 74 LPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAAI 133
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
SLA RV +E R E ++ Y F D+++ ++TD LL+ ++D L + SC+
Sbjct: 134 SLATRVSDEKRT--ELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCV 191
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDL-----RLVIMSATADAHQLSKYFYDCGISHV 338
I+DEAHER+ RR +L ++++MSAT D S+YF + ++
Sbjct: 192 ILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYL 251
Query: 339 VGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEW-- 395
GR P+ V Y Y+ + V ++H IL FLT + E+E
Sbjct: 252 EGRQHPIQVFYTK------QPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMS 305
Query: 396 -ACEKF-----DA-PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPG 447
C D P+ + LP + L + +Q VF+ P G RKVI +TN+AETS+TI G
Sbjct: 306 KTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+K+V+D+GMVK + P +G+ VL V RVS++ A QR GRAGR + G CYRLY++ +FE
Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK 425
Query: 508 RPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
PEI R +L +L++LA+ + +V FDF+ PS I+ AI L LGA++ +
Sbjct: 426 FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKD 485
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
LT G+ + +EP+ K IL + E L + ++++ S+ S E+
Sbjct: 486 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLS-VDSVLHNPPSRREE 544
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL- 686
++ ++ +F GD TLL++YR + +L + WC EN VN+K++ + +L
Sbjct: 545 VQG--VRKKFISSEGDHMTLLNIYRTFKNLGGNK--DWCKENFVNSKNMTLVAEVRAQLR 600
Query: 687 ETCLEKELAI 696
+ CL+ + I
Sbjct: 601 DICLKMSMPI 610
Score = 113 (44.8 bits), Expect = 1.4e-82, Sum P(2) = 1.4e-82
Identities = 45/155 (29%), Positives = 72/155 (46%)
Query: 633 LKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLE 691
++ +F GD TLL++YR + +L + WC EN VN+K++ + +L + CL+
Sbjct: 548 VRKKFISSEGDHMTLLNIYRTFKNLGGNK--DWCKENFVNSKNMTLVAEVRAQLRDICLK 605
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQH--VQ 749
+ P + D E + LA ++ M + Q A T H V
Sbjct: 606 MSM-----------PIASSRGDV---ESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVA 651
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYL--VCV 782
+HPS ++F KP VV+ ELL N Y+ +CV
Sbjct: 652 IHPSS--VLFHCKPACVVYTELLYTNKCYMRDLCV 684
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 831 (297.6 bits), Expect = 1.5e-82, P = 1.5e-82
Identities = 216/643 (33%), Positives = 326/643 (50%)
Query: 127 KESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVL 186
KES A + D ++ + + E + + LPIY YR +L+ + Q+LV+
Sbjct: 366 KESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVI 425
Query: 187 IGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICY 246
+G+TG GK+TQ+ Q+L ++G + CTQPR++AA+S+A RV +E G V
Sbjct: 426 VGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEM-GVKLGHEVGYS 484
Query: 247 PSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXX 306
F + + YMTD LL+ + + DL+ S +IVDEAHER+
Sbjct: 485 IRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIA 544
Query: 307 CRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAV-ASYVS 365
R DL+L+I SAT DA + S YF I GR +PV++ Y TSA A Y+
Sbjct: 545 RFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINY-------TSAPEADYMD 597
Query: 366 DVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD---------APSAVALPFHGQLSF 416
+ + +H E G IL F T + E+E A E + P + L
Sbjct: 598 AAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPS 657
Query: 417 DEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCR 475
+ Q +F+ P G RKV+ ATN+AETSLTI G+K+V+D G K + P TGM L +
Sbjct: 658 ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITP 717
Query: 476 VSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLNQEPEIHRVHLGIAVLRILALGIR 534
+S++SA QRAGRAGRT PG+CYRLY+ ++ N PE+ R +L VL + +LGI
Sbjct: 718 ISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIH 777
Query: 535 DVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILS 594
D+ FDF+D P A+A+ ++ L LGA+ N + ELT+ G+ + + ++P L K+I+
Sbjct: 778 DLINFDFMDPPPAEALVKSLELLFALGAL---NKLGELTKAGRRMAEFPLDPMLSKMIVV 834
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYRE 653
+ + E + +AA+++ SIF R D+++ AD ++ F N GD LL VY
Sbjct: 835 SDKYKCSDEIISIAAMLSIGGSIFYR--PKDKQVHADNARMNFHTGNVGDHIALLKVYSS 892
Query: 654 WDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYD 713
W +WC+EN + +S++R +D +LE LE+ + I I S E D
Sbjct: 893 WKET--NFSTQWCYENYIQVRSMKRARDIRDQLEGLLER-VEIDISS-------NLNELD 942
Query: 714 KWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSL 756
K I+ + Y Q V +HP+ L
Sbjct: 943 SVRKSIVAGFFPHTAKLQKNGS---YRTVKHPQTVHIHPNSGL 982
Score = 217 (81.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 77/285 (27%), Positives = 125/285 (43%)
Query: 528 ILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
+LAL + D E +++L L A+ N + ELT+ G+ + + ++P
Sbjct: 768 VLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPM 827
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFT 646
L K+I+ + + E + +AA+++ SIF R D+++ AD ++ F N GD
Sbjct: 828 LSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR--PKDKQVHADNARMNFHTGNVGDHIA 885
Query: 647 LLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNP 706
LL VY W +WC+EN + +S++R +D +LE LE+ + I I S
Sbjct: 886 LLKVYSSWKET--NFSTQWCYENYIQVRSMKRARDIRDQLEGLLER-VEIDISS------ 936
Query: 707 HKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWV 766
E D K I+ + Y Q V +HP+ L P WV
Sbjct: 937 -NLNELDSVRKSIVAGFFPHTAKLQKNGS---YRTVKHPQTVHIHPNSGLSQV--LPRWV 990
Query: 767 VFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFDVSMMERKKL 809
V+ EL+ + +Y+ VT + L L P L DV KK+
Sbjct: 991 VYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKM 1035
Score = 42 (19.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 196 TQLVQFLADSGIAAE-------QSIVCTQPRKIAAISLAQRVREES 234
T+LV L D G ++ + I PRK A ++L Q+ E+
Sbjct: 40 TELVGELVDYGFSSSGDTRSFAEEIFARVPRKTAGVNLYQKHEAEA 85
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 539 (194.8 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 144/477 (30%), Positives = 252/477 (52%)
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
I + GR +PVD ++ SA +YV V+ V ++H E EG IL FLT + E+E
Sbjct: 207 IISIEGRMYPVDTLFLE------SAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIE 260
Query: 395 WACEKFD---------APSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLT 444
A + + S + LP + L+ D+Q VF+ P RKV+ +TN+AE S+T
Sbjct: 261 TAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVT 320
Query: 445 IPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSD 504
I G+ +V+D G K ++P TG+ L +S+++A QRAGRAGRT+PG+C+RLY++
Sbjct: 321 INGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHA 380
Query: 505 FETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+E P PEI R +L ++++ ALGI ++ FDF+ +P A + A L LGAI
Sbjct: 381 YEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLYSLGAI- 439
Query: 565 LNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGS 623
+ +LT+ G + +L ++P + K++LS E L +AA+++ +++ V
Sbjct: 440 --DDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVW--VQH 495
Query: 624 DDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTI 683
D +K ++ + +F GD T L+VY+ + + ++E +KWC +N +N +SL R
Sbjct: 496 DGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKE-SKWCRDNLLNYRSLLRAVSVR 554
Query: 684 KELETCLEK---ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYE 740
+L+ LE+ ++ PS++ N ++ + ++ + + + A D ++
Sbjct: 555 AQLKRYLERFGIQVDETFPSHY--NKSDLSKPAEKIQRCLTTGYFAHAARMQP-DGT-FK 610
Query: 741 VAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQ-YLVCVTAFDFDSLSTLCPS 796
G + HPS L+F +K WV+F E++ + ++ +T + L P+
Sbjct: 611 TVSGGMTLHAHPSS--LMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPN 665
Score = 316 (116.3 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 87/244 (35%), Positives = 128/244 (52%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LPI ++Q IL + + +++G+TG GK+TQL Q+L +G E ++I TQPR++AA
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
++A RV EE R C + V F +++ ++TD LL+ + D LSR S I
Sbjct: 82 TTVAARVAEEMR-CKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYSVI 140
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY----DCGISHVV 339
+VDEAHERS RR +LR+++ SAT A +YF G + V
Sbjct: 141 MVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNGEV 200
Query: 340 GRN----FPVDVRYVPCATAGT-SAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
G N ++ R P T SA +YV V+ V ++H E EG IL FLT + E+E
Sbjct: 201 GGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIE 260
Query: 395 WACE 398
A +
Sbjct: 261 TAIQ 264
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 817 (292.7 bits), Expect = 5.6e-81, P = 5.6e-81
Identities = 219/615 (35%), Positives = 331/615 (53%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQ 217
KR E LP++ ++D ++ I Q+++L+GETG GK+TQ+ QF+ D+G+ +V TQ
Sbjct: 73 KRKE--LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQ 130
Query: 218 PRKIAAISLAQRVREESRGCYE-DDSV---ICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 273
PR++AAIS+A+RV EE +E + V I + SSA+ F + Y+TD LL+ M+
Sbjct: 131 PRRVAAISVAKRVSEEMD--FELGEEVGYSIRFEELSSARTF---MKYLTDGMLLRESMS 185
Query: 274 DRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDC 333
D L++ II+DEAHER+ RR DL+L++MSAT +A + KYF +
Sbjct: 186 DPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENA 245
Query: 334 GISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEV 393
+ V GR PV++ Y A Y+ VR V ++HT E G IL FLT + E+
Sbjct: 246 PLIKVPGRLHPVEIFYTE------EAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEI 299
Query: 394 EWACEKFDA-------PSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIP 446
E C K P LP + L +Q +F + RK I +TN+AETSLTI
Sbjct: 300 EDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCK-ERKCIVSTNIAETSLTID 358
Query: 447 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 506
G+ FV+D G K+ + P + + L V +S++SANQRAGRAGRT PG+C+RLY++ F+
Sbjct: 359 GIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFK 418
Query: 507 TRPLNQ-EPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
+ Q PEI R +L VL++L LG+ D+ FDF+D P + A+ L LGA+
Sbjct: 419 ELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALD- 477
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
+ G +LTE G + + ++P+L K+++ R E L +AA M +A + F R D
Sbjct: 478 DEG--QLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAA-MLSAPNCFMR--PKD 532
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKE 685
+I+AD K F H +GD T+L+VY + E WC++N +N +++++ +
Sbjct: 533 NRIEADSAKKSFDHFDGDHLTMLNVYHSFKK--NGEDPTWCYDNFLNHRAIKQADSVRSQ 590
Query: 686 LETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG---YDQLGYEV 741
L L + +L ++ N Y Y+ +K+ I + VA Y LG E
Sbjct: 591 LARILTRFKLPLVSGDV---NSKFY--YEN-IKKCIAAGFFMQVAKCEKKNIYFTLGDE- 643
Query: 742 AMTGQHVQLHPSCSL 756
Q V HPS L
Sbjct: 644 ----QSVIFHPSTGL 654
Score = 194 (73.4 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 66/242 (27%), Positives = 112/242 (46%)
Query: 571 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 630
+LTE G + + ++P+L K+++ R E L +AA M +A + F R D +I+A
Sbjct: 481 QLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAA-MLSAPNCFMR--PKDNRIEA 537
Query: 631 DCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL 690
D K F H +GD T+L+VY + E WC++N +N +++++ +L L
Sbjct: 538 DSAKKSFDHFDGDHLTMLNVYHSFKK--NGEDPTWCYDNFLNHRAIKQADSVRSQLARIL 595
Query: 691 EK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG---YDQLGYEVAMTGQ 746
+ +L ++ N Y Y+ +K+ I + VA Y LG E Q
Sbjct: 596 TRFKLPLVSGDV---NSKFY--YEN-IKKCIAAGFFMQVAKCEKKNIYFTLGDE-----Q 644
Query: 747 HVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMER 806
V HPS L ++P + ++ E + + Y+ +T FD L L PS S ++
Sbjct: 645 SVIFHPSTGLT---RRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKK 701
Query: 807 KK 808
K
Sbjct: 702 TK 703
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 803 (287.7 bits), Expect = 6.8e-81, Sum P(2) = 6.8e-81
Identities = 206/605 (34%), Positives = 310/605 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPIY YR +L + Q+L+++GETG GK+TQ+ Q+L ++G + CTQPR++AA+
Sbjct: 404 LPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAM 463
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A RV +E G + + Y F + + YMTD LL+ + + DL S I
Sbjct: 464 SVAARVAQEMGGKLGHE--VGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVI 521
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
IVDEAHER+ R DL+L+I SAT DA + S +F I GR +
Sbjct: 522 IVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRY 581
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAP 403
PVD+ C T T+ A Y+ + V +H E G +L FL + E+E E
Sbjct: 582 PVDI----CFT--TAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHK 635
Query: 404 ---------SAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVID 453
+ P + L + Q +F+ P G RKV+ ATN+AETSLTI G+K+V+D
Sbjct: 636 IRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVD 695
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF-ETRPLNQ 512
G K + P TGM L V +S++SA QR GRAGRT PG+CYRLY+ ++ N
Sbjct: 696 PGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNT 755
Query: 513 EPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFEL 572
PEI R +L VL + +LGI ++ FDF+D P ++A+ ++ L LGA+ N + EL
Sbjct: 756 VPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGAL---NQLGEL 812
Query: 573 TEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADC 632
T+ G+ + + ++P L K+I+ + + E + +AA+++ SIF R D+++ AD
Sbjct: 813 TKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYR--PKDKQVHADN 870
Query: 633 LKVQFCHRN-GDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
F N GD L +Y W +WC+EN + +S++R +D +LE LE
Sbjct: 871 AMKNFHVGNVGDHIAFLKIYNSWKET--NYSTQWCYENYIQVRSMKRARDIRDQLEGLLE 928
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 751
+ + I + S N + E D K I+ + Y Q V +H
Sbjct: 929 R-VEIDVSS----NAN---ELDSIRKSIVAGFFPHTAKLQKNGS---YRTVKHPQTVHIH 977
Query: 752 PSCSL 756
P+ L
Sbjct: 978 PASGL 982
Score = 199 (75.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 70/262 (26%), Positives = 118/262 (45%)
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAV 610
E I++L L A+ N + ELT+ G+ + + ++P L K+I+ + + E + +AA+
Sbjct: 791 EALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAM 850
Query: 611 MANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWDSLPREERNKWCWEN 669
++ SIF R D+++ AD F N GD L +Y W +WC+EN
Sbjct: 851 LSIGPSIFYR--PKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKET--NYSTQWCYEN 906
Query: 670 SVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVA 729
+ +S++R +D +LE LE+ + I + S N + E D K I+
Sbjct: 907 YIQVRSMKRARDIRDQLEGLLER-VEIDVSS----NAN---ELDSIRKSIVAGFFPHTAK 958
Query: 730 MFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 789
+ Y Q V +HP+ L P WVV+ +L+ + +Y+ VT +
Sbjct: 959 LQKNGS---YRTVKHPQTVHIHPASGLSQV--LPRWVVYHQLVLTSKEYMRQVTELKPEW 1013
Query: 790 LSTLCPS--PLFDVSMMERKKL 809
L + P L DV KK+
Sbjct: 1014 LIEIAPHYYQLKDVEDATSKKM 1035
Score = 38 (18.4 bits), Expect = 6.8e-81, Sum P(2) = 6.8e-81
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 93 LFKEREMIMRRVREF--KNGMH-CVLKYLDDPQNVAKKESYDA 132
LF + ++ R +REF K ++ + K + NV + DA
Sbjct: 252 LFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDA 294
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 812 (290.9 bits), Expect = 2.1e-80, P = 2.1e-80
Identities = 208/637 (32%), Positives = 344/637 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LP+Y YR++ L+ I Q L+++GETG GK+TQL Q+L ++G + Q I CTQPR++AA
Sbjct: 229 LPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRRVAA 288
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A RV E + + + + + + Y+TD LL+ F+ D L + S I
Sbjct: 289 TSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKYSAI 348
Query: 284 IVDEAHER--SXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 341
++DEAHER S R+ DL+++I SAT +A + S++F + I ++ GR
Sbjct: 349 MIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPGR 408
Query: 342 NFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEVEWACEKF 400
FPV + Y A+Y+ + + ++H T+ G IL FLT + E+E E+
Sbjct: 409 RFPVKIHYTK------QPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIE-TMEEI 461
Query: 401 DAPSAVAL-----PF-----HGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTIPGVK 449
S + L P + L + Q +F+ P RK++ ATN+AETS+TI G+
Sbjct: 462 LRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGIS 521
Query: 450 FVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR- 508
+VID G VK++ + P TGM L V S++SA+QRAGRAGR PG+C+RL++K F
Sbjct: 522 YVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNEL 581
Query: 509 PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNG 568
NQ+PEI RV+L +L +L+LGI D+ GF+F+D PS +AI A+ L LGA+
Sbjct: 582 DSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQG- 640
Query: 569 VFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKI 628
+LT+ GK + + ++P K IL+ + ++ + + A++ +S++F R D+K
Sbjct: 641 --KLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYR--PKDKKE 696
Query: 629 KADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELET 688
AD K +F GD F LL ++++W + +WC + + K+++R ++ ++L
Sbjct: 697 LADKRKQEFNDLQGDQFMLLKIWQQW--VDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIR 754
Query: 689 CLEKELAIIIPSYWLWNPH--KYTEYDKWLKEIILSALAENVAMFS--G--YDQLGYEVA 742
L K++ I + S H + T+ + L + ++S N+ S G Y +L
Sbjct: 755 -LSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKG 813
Query: 743 MTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYL 779
+HPS + KP ++++ EL+ + +Y+
Sbjct: 814 GNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYM 850
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 823 (294.8 bits), Expect = 3.2e-79, P = 3.2e-79
Identities = 193/543 (35%), Positives = 309/543 (56%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQP 218
K + LPI+ R D+++ I +++++GETG GK+TQLVQ+L + G + I CTQP
Sbjct: 653 KEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCTQP 712
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 277
R++AA+S+A+RV EE ++ + Y F ++ + YMTD LL+ ND +L
Sbjct: 713 RRVAAVSVAKRVSEEMSVTLGNE--VGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNL 770
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
+ S II+DEAHERS RR+D++L++ SAT D+ + S +F D +
Sbjct: 771 DKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFT 830
Query: 338 VVGRNFPVDVRY--VPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 395
+ GR FPVDV + PC YV V+ + +H T+ G IL F+T + ++E
Sbjct: 831 IPGRTFPVDVLWSKTPCE--------DYVDSAVKQILSIHVTQGVGDILVFMTGQEDIET 882
Query: 396 AC----EKF-----DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTI 445
C E+ AP LP + QL D Q +F K+ G RK I ATN+AETSLT+
Sbjct: 883 TCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTV 942
Query: 446 PGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF 505
G+ +VID+G K + P GM+ L+V +S+++ANQR+GRAGRT PGRCYRLY++S F
Sbjct: 943 DGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAF 1002
Query: 506 ETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+ + N PEI R +LG VL + ++G++++ FDF+D P I ++ L LGA+
Sbjct: 1003 KYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALD 1062
Query: 565 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRV-GS 623
+ G ++T GK + + ++P L K+++ + G++ +V M + S+F R G+
Sbjct: 1063 -DQG--QITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQD-IVTIVSMLSMPSVFYRPKGA 1118
Query: 624 DDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTI 683
++E +D + +F D TLL VY++W ++WC E+ ++ K++R+ ++
Sbjct: 1119 EEE---SDASREKFFVPESDHLTLLHVYQQWKI--NNYSSQWCAEHYIHIKAMRKVREVR 1173
Query: 684 KEL 686
+L
Sbjct: 1174 GQL 1176
Score = 169 (64.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 59/260 (22%), Positives = 127/260 (48%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + ++T GK + + ++P L K+++ + G++ +V M +
Sbjct: 1049 LNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQD-IVTIVSMLS 1107
Query: 614 ASSIFCRV-GSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
S+F R G+++E +D + +F D TLL VY++W ++WC E+ ++
Sbjct: 1108 MPSVFYRPKGAEEE---SDASREKFFVPESDHLTLLHVYQQWKI--NNYSSQWCAEHYIH 1162
Query: 673 AKSLRRCQDTIKEL-ETCLEKELAI-IIPSYWLWNPHKYTEYDKWLKEIILSALAENVAM 730
K++R+ ++ +L + ++ ++ + S W D +++ I S+ + A
Sbjct: 1163 IKAMRKVREVRGQLLDIMVQHDMKVESCGSNW----------DI-IRKAITSSYFHHSAK 1211
Query: 731 FSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSL 790
G + Y G LHP+ +L G P ++V+ EL+ + +Y+ VTA D + L
Sbjct: 1212 IKGIGE--YVNMRNGMPCFLHPTSALYGLGYAPDYIVYHELVMTSKEYMQIVTAVDPNWL 1269
Query: 791 STLCPSPLFDV--SMMERKK 808
+ + P F + S+ ++K+
Sbjct: 1270 AEMGPM-FFSIKKSLKDKKR 1288
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 787 (282.1 bits), Expect = 3.7e-79, Sum P(2) = 3.7e-79
Identities = 223/663 (33%), Positives = 344/663 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF-LADSGIAAEQS-IVCTQPRKIA 222
LP++ R + L+ QI+V +GETG GK+TQ+ QF L D E + + CTQPR++A
Sbjct: 93 LPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVA 152
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVI--YMTDHCLLQHFMNDRDLSRI 280
A+S+AQRV EE ++ + Y S +K I YMTD LL+ M D DLSR
Sbjct: 153 AMSVAQRVAEEMDVKLGEE--VGY-SIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
SCII+DEAHER+ RR DL+++IMSAT DA + +YF D + V G
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 341 RNFPVDVRYVPCATAG--TSAVASYVS-DVVRMVGEV--HTTEKEGTILAFLTSKMEVEW 395
R +PV++ Y P SA+ + + G++ T ++ A +E +
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 396 AC-EKFDAPSAVALPFHGQLSFDEQFCVFKSYP----GR--RKVIFATNVAETSLTIPGV 448
E+ P +V P +G L +Q +F+ P GR RKV+ +TN+AETSLTI G+
Sbjct: 330 LVREEGCGPLSV-YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGI 388
Query: 449 KFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR 508
+V+D G K+ + P + L V +S++SA QRAGRAGRT PG+C+RLY++ F+
Sbjct: 389 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKE 448
Query: 509 PLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
+ Q PEI R +L VL + LGI D+ FDF+D P+ + + A+ L L + +
Sbjct: 449 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLD-DE 507
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
G LT G+ + ++P L +++ F + +E L + A M + ++F R D K
Sbjct: 508 G--NLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVA-MLSVPNVFIRPTKD--K 562
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREER--NKWCWENSVNAKSLRRCQDTIKE 685
+AD K F H +GD TLL+VY + S E +KWC ++ +N +SL + +
Sbjct: 563 KRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQ 622
Query: 686 LETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMF-SGYDQLGYEVAM 743
LE + + L + Y +P KY +D +++ + S VA SG GY
Sbjct: 623 LERLMNRYNLELNTTDYE--SP-KY--FDN-IRKALASGFFMQVAKKRSGAK--GYITVK 674
Query: 744 TGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSM 803
Q V +HPS + G WV++ E + + Y+ VT+ + L + P+ +D+S
Sbjct: 675 DNQDVLIHPST---VLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPA-YYDLSN 730
Query: 804 MER 806
++
Sbjct: 731 FQK 733
Score = 39 (18.8 bits), Expect = 3.7e-79, Sum P(2) = 3.7e-79
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 863 FASSQDIEEVLGLVSDVLEYEKKW-LHNECI 892
+ + +D ++VL S VL ++ +W ++NE +
Sbjct: 670 YITVKDNQDVLIHPSTVLGHDAEWVIYNEFV 700
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 792 (283.9 bits), Expect = 3.4e-78, P = 3.4e-78
Identities = 191/542 (35%), Positives = 301/542 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI+ +Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+
Sbjct: 71 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 130
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A+RV EE G ++ + Y F + + YMTD LL+ + + DL S I
Sbjct: 131 SVAKRVSEEMGGNLGEE--VGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAI 188
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
I+DEAHERS RR DL+L++ SAT DA + + +F + I H+ GR F
Sbjct: 189 IMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTF 248
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--- 400
PVD+ + + YV V+ +VH + G IL F+ + ++E ++
Sbjct: 249 PVDILF------SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEH 302
Query: 401 -----DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 454
+AP+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDS
Sbjct: 303 LEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 362
Query: 455 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE- 513
G K F P GM+ L++ +SQ++ANQR+GRAGRT PG+C+RLY++S ++ L
Sbjct: 363 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 422
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
PEI R +L VL + +LG++D+ F F+D P + ++ L LGA+ G LT
Sbjct: 423 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LT 479
Query: 574 EEGKFLVKLGIEPRLGK-LILSCFRRRLGREGLVLAAV-MANASSIFCRVGSDDEKIKAD 631
G+ +V+ ++P L K LI+SC +G +L V M + +IF R +E+ +D
Sbjct: 480 STGRLMVEFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREEE--SD 534
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
++ +F D T L+VY +W + WC ++ ++AK++R+ ++ +L+ +
Sbjct: 535 QIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMV 592
Query: 692 KE 693
++
Sbjct: 593 QQ 594
Score = 198 (74.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/242 (24%), Positives = 118/242 (48%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + LT G+ +V+ ++P L K+++ E L++ + M +
Sbjct: 460 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLS 518
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ +D ++ +F D T L+VY +W + WC ++ ++A
Sbjct: 519 VPAIFYRPKGREEE--SDQIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHA 574
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K++R+ ++ +L+ + ++ + + S T++D +++ I +A A G
Sbjct: 575 KAMRKVREVRAQLKDIMVQQ-RMSLASCG-------TDWDI-VRKCICAAYFHQAAKLKG 625
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L
Sbjct: 626 IGE--YVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 683
Query: 794 CP 795
P
Sbjct: 684 GP 685
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 789 (282.8 bits), Expect = 7.3e-78, P = 7.3e-78
Identities = 190/552 (34%), Positives = 302/552 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP + R+D++R I Q+++++GETG GK+TQL QFL + G I CTQPR++AA+
Sbjct: 303 LPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVAAM 362
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A+RV EE + + Y F D+ + YMTD LL+ +N+ DL R SCI
Sbjct: 363 SVAKRVSEEME--VKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCI 420
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
I+DEAHER+ RR DL+L++ SAT +A + S +F + GR F
Sbjct: 421 IMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTF 480
Query: 344 PVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE----K 399
PVDV + S V YV V+ V +H + G IL F+T + ++E CE +
Sbjct: 481 PVDVMF------SRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRER 534
Query: 400 FDA----PSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVIDS 454
DA P LP + Q+ D Q +F ++ PG RK I ATN+AETSLT+ G+ +V+D+
Sbjct: 535 LDALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDA 594
Query: 455 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE- 513
G K + P GM+ L++ +SQ++A+QR+GRAGRT PG+ +RL+++ F+ Q
Sbjct: 595 GYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTI 654
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
PEI R +L +L I +LG++D+ FDF+D P + ++ +L LGA+ N G ++T
Sbjct: 655 PEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALD-NLG--DMT 711
Query: 574 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 633
+ G+ + ++P L KLI+ E + + + M + ++F R E+ +D
Sbjct: 712 DLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVS-MLSVPNVFYRPKERQEE--SDAA 768
Query: 634 KVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
+ +F D T L VY +W + + WC + +++KSLRR ++ +L ++ +
Sbjct: 769 REKFFVPESDHLTFLHVYSQWKA--NGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQ 826
Query: 694 LAIIIPSYWLWN 705
I+ W+
Sbjct: 827 KMDIVSCGTDWD 838
Score = 163 (62.4 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 56/231 (24%), Positives = 106/231 (45%)
Query: 556 NLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 615
+L L A+ + + ++T+ G+ + ++P L KLI+ E + + + M +
Sbjct: 694 SLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVS-MLSVP 752
Query: 616 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 675
++F R E+ +D + +F D T L VY +W + + WC + +++KS
Sbjct: 753 NVFYRPKERQEE--SDAAREKFFVPESDHLTFLHVYSQWKA--NGHSDAWCSRHFLHSKS 808
Query: 676 LRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYD 735
LRR ++ +L ++ + I+ T++D ++ I S A G
Sbjct: 809 LRRAKEVRDQLLDIMKTQKMDIVSCG--------TDWDV-VRRCICSGYYHQAAKVKGIG 859
Query: 736 QLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFD 786
+ Y T VQLHP+ +L G P +VV+ EL+ + +Y+ VT+ D
Sbjct: 860 E--YINLRTSVTVQLHPTSALYGLGFLPDYVVYHELILTSKEYMSTVTSVD 908
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 754 (270.5 bits), Expect = 8.7e-78, Sum P(3) = 8.7e-78
Identities = 209/654 (31%), Positives = 333/654 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF-LADS--GIAAEQSIVCTQPRKI 221
LP++ R++ L+ + QI+V +GETG GK+TQ+ QF L D + +Q + CTQPR++
Sbjct: 94 LPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQ-VACTQPRRV 152
Query: 222 AAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVI--YMTDHCLLQHFMNDRDLSR 279
AA+S+A RV +E E + Y + + K I YMTD LL+ M D DL+R
Sbjct: 153 AAMSVAARVADEMD--VELGEEVGY-NIRFENNSGPKTILKYMTDGMLLREAMEDHDLTR 209
Query: 280 ISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 339
SCII+DEAHER+ RR DL+++IMSAT DA + YF + + V
Sbjct: 210 YSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVP 269
Query: 340 GRNFPVDVRYVPCATAG-TSAVASYVSDVVRMVGE----VHTTEKEGTILAFLTSKMEVE 394
GR PV++ Y P A V + GE + T +E A +E +
Sbjct: 270 GRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGD 329
Query: 395 WACEKFDAPSAVALPFHGQLSFDEQFCVFKSYP------GR--RKVIFATNVAETSLTIP 446
+ + P +G L +Q +F+ P GR RKVI +TN+AETSLTI
Sbjct: 330 ELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTID 389
Query: 447 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 506
G+ +V+D G K+ + P + L V +S++SA QRAGRAGRT PG+C+RLY++ F+
Sbjct: 390 GIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFK 449
Query: 507 TRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
+ Q PEI R +L VL + LGI D+ FDF+D P+ + + A+ L L +
Sbjct: 450 KELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCLS- 508
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
+ G +LT G+ + ++P L +++ E L + A M + ++F R S
Sbjct: 509 DEG--DLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVA-MLSVPNVFVRPAS-- 563
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNKWCWENSVNAKSLRRCQDTI 683
+ +AD K+ F +GD TL++VY + S E +KWC +N ++ +SL ++
Sbjct: 564 ARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVR 623
Query: 684 KELETCLEKELAIIIPSYWLWNPHKYTEYDKW--LKEIILSALAENVAMFSGYDQLGYEV 741
+L+ ++K +I Y ++ +E++ W +K+ +++ VA ++ GY
Sbjct: 624 NQLQRLMQKYDLQLISQY-----NQVSEFEYWENVKKALVAGFFMQVAKKKSGNK-GYLT 677
Query: 742 AMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HPS L G+ W+++ E + + Y+ VT + L + P
Sbjct: 678 VKDNQDVLIHPSTVLSKEGE---WLIYNEFVLTSKNYIRTVTVVKPEWLVEIAP 728
Score = 41 (19.5 bits), Expect = 8.7e-78, Sum P(3) = 8.7e-78
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 863 FASSQDIEEVLGLVSDVLEYEKKWL-HNECI 892
+ + +D ++VL S VL E +WL +NE +
Sbjct: 675 YLTVKDNQDVLIHPSTVLSKEGEWLIYNEFV 705
Score = 40 (19.1 bits), Expect = 8.7e-78, Sum P(3) = 8.7e-78
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 19 LIPHVVVPSDADELEERLRNLFVDH 43
LI H A +LE+ +N F H
Sbjct: 54 LIRHQTTAEQAQKLEDGPKNPFTGH 78
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 592 (213.5 bits), Expect = 2.8e-77, Sum P(2) = 2.8e-77
Identities = 170/507 (33%), Positives = 254/507 (50%)
Query: 312 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMV 371
L+L+IMSA+ DA S+YF HV GR FPVD+ Y + YV + +
Sbjct: 229 LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYT------VHPESDYVDATLVTI 282
Query: 372 GEVHTTEKEGTILAFLTSKMEVEWACEKF----------DAPSAVALPFHGQLSFDEQFC 421
++H EK G IL FLT + E+E + E+ D + L L ++Q
Sbjct: 283 FQIHFEEKPGDILVFLTGQDEIE-SVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMK 341
Query: 422 VFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 480
VF P G RKVI ATN+AETS+TIPG+++VID G VK ++P GM L V S++
Sbjct: 342 VFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQ 401
Query: 481 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 540
QR+GRAGR PG+ +RLY + +FE + +PEI R +L +L++ ALGI D+ GFD
Sbjct: 402 TLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFD 461
Query: 541 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 600
FID PS AI A+ L LGA+ ++G E G + +L +EP K ++ +
Sbjct: 462 FIDKPSRGAIIKALAELHSLGALA-DDGKLE-NPVGYQMSRLPLEPVYSKALILANQFNC 519
Query: 601 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE 660
E L+ AV++ SIF +++ +A K F GD T LSVYRE D +
Sbjct: 520 LEEMLITVAVLS-VESIF--YDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEK 576
Query: 661 ER------------NKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHK 708
+ KWC EN VN++SL+ +D +++ +E ++ + S +
Sbjct: 577 RKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVE-QIGFNVSSCG----ND 631
Query: 709 YTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVF 768
+ + L A+ G Y +G+ V +HP+ ++F KP V+F
Sbjct: 632 MLAFRRCLAASFFLKAAQR--QLDGT----YRALESGEVVHIHPTS--VLFRAKPECVIF 683
Query: 769 GELLSVNNQYLVCVTAFDFDSLSTLCP 795
EL+ + +Y+ +T D LS L P
Sbjct: 684 NELMQTSKKYIKNLTIIDSLWLSELAP 710
Score = 225 (84.3 bits), Expect = 2.8e-77, Sum P(2) = 2.8e-77
Identities = 53/130 (40%), Positives = 78/130 (60%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI + ++ + IL+++GETG GK+TQL QFL ++G E ++ TQPR+IAA
Sbjct: 41 LPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAA 100
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A+RV EE + + Y F +++ YMTD LL+ + D LSR S
Sbjct: 101 VTVAKRVAEECE--VQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSV 158
Query: 283 IIVDEAHERS 292
IIVDEAH+RS
Sbjct: 159 IIVDEAHDRS 168
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 780 (279.6 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 212/647 (32%), Positives = 333/647 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA--AEQSIVCTQPRKIA 222
LP+Y R++ L+ + QI+V +GETG GK+TQ+ QF+ + I CTQPR++A
Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVA 134
Query: 223 AISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 281
A+S+A+RV +E ++ + Y F ++ + YMTD LL+ M D LSR S
Sbjct: 135 AMSVAKRVADEMDVDLGEE--VGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYS 192
Query: 282 CIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 341
CII+DEAHER+ RR DL++++MSAT DA + KYF+D + V GR
Sbjct: 193 CIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGR 252
Query: 342 NFPVDVRYV--PCATAGTSAVASYVS-DVVRMVGE--VHTTEKEGTILAFLTSKMEVEWA 396
+PV++ Y P +A+ + + V G+ V T +E A +E +
Sbjct: 253 TYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDL 312
Query: 397 CEKFDAPSAVALPFHGQLSFDEQFCVFKSYP-----GR-RKVIFATNVAETSLTIPGVKF 450
+ A P +G L ++Q +F+ P G RKV+ +TN+AETSLTI G+ +
Sbjct: 313 VREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVY 372
Query: 451 VIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL 510
V+D G K+ + P + L V +S++SA QRAGRAGRT PG+C+RLY++ F +
Sbjct: 373 VVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELI 432
Query: 511 NQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGV 569
Q PEI R +L VL + LGI D+ FD++D P+ + + A+ L L + +NG
Sbjct: 433 EQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLD-DNG- 490
Query: 570 FELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIK 629
+LT G+ + ++P L +++ E L L A+++ ++F R S K+
Sbjct: 491 -DLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLS-VPNVFVRPNSA-RKL- 546
Query: 630 ADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETC 689
AD ++ QF H +GD TLL+VY + S E WCW + ++ ++L + K+L
Sbjct: 547 ADEMRQQFTHPDGDHLTLLNVYHAYKS--GEGTADWCWNHFLSHRALISADNVRKQLRRT 604
Query: 690 LEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQ 749
+E++ +I + P Y ++ ++S VA S + Y Q V
Sbjct: 605 MERQEVELIST-----PFDDKNYYVNIRRALVSGFFMQVAKKSANGK-NYVTMKDNQVVS 658
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS 796
LHPSC L + P WVV+ E + ++ VTA + L L P+
Sbjct: 659 LHPSCGLSV---TPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPN 702
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 799 (286.3 bits), Expect = 8.1e-77, P = 8.1e-77
Identities = 250/817 (30%), Positives = 407/817 (49%)
Query: 5 WESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----LK 58
WE+ L ++ + V D +E +L V + V ++G +V K +
Sbjct: 377 WETN----RMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIP 432
Query: 59 MKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL 118
+KD D +A ++ R GS+ + E ERKK K E+ ++ + +K
Sbjct: 433 VKDATSD-LAIIA-RKGSQ-TVRKHREQKERKKAQHKHWELAGTKLGDIMG-----VKKE 484
Query: 119 DDPQNVAKKESYDANVDVFRFEDCQRF-DWSRIQAFIVRE-CKR---LEDG--LPIYMYR 171
++P K + D VD +R E Q+F D + ++ E K+ LE LPI+ +
Sbjct: 485 EEPD---KSLTEDGKVD-YRTE--QKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQ 538
Query: 172 QDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVR 231
Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+S+A+RV
Sbjct: 539 QELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVS 598
Query: 232 EESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHE 290
EE G ++ + Y F + + YMTD LL+ + + DL S II+DEAHE
Sbjct: 599 EEMGGNLGEE--VGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 291 RSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
RS RR DL+L++ SAT DA + + +F + I H+ GR FPVD+ +
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILF- 715
Query: 351 PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DA 402
+ YV V+ +VH + G IL F+ + ++E ++ +A
Sbjct: 716 -----SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 403 PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESY 461
P+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDSG K
Sbjct: 771 PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 830
Query: 462 FEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVH 520
P G + L++ + + N G +G T P RC RLY++S ++ L PEI R +
Sbjct: 831 SSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTVPEIQRTN 889
Query: 521 LGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 580
L VL + +LG++D+ F F+D P + ++ L LGA+ G LT G+ +V
Sbjct: 890 LANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LTSTGRLMV 946
Query: 581 KLGIEPRLGK-LILSCFRRRLGREGLVLAAV-MANASSIFCRVGSDDEKIKADCLKVQFC 638
+ ++P L K LI+SC +G +L V M + +IF R +E+ +D ++ +F
Sbjct: 947 EFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREEE--SDQIREKFA 1001
Query: 639 HRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIII 698
D + L+VY +W + WC ++ ++AK++R+ ++ +L+ + ++ + +
Sbjct: 1002 VPESDHLSYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ-RMSL 1058
Query: 699 PSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLI 758
S T++D +++ I +A A G + Y TG LHP+ SL
Sbjct: 1059 ASCG-------TDWDI-VRKCICAAYFHQAAKLKGIGE--YVNIRTGMPCHLHPTSSLFG 1108
Query: 759 FGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
G P ++V+ EL+ +Y+ CVTA D + L+ L P
Sbjct: 1109 MGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1145
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 795 (284.9 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 186/539 (34%), Positives = 295/539 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP+Y R ++++ + Q LV++GETG GK+TQ+ Q+L + G + I CTQPR++AA+
Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
S+A+RV EE GC V F D+++ YMTD L + + D ++S+ S I+
Sbjct: 543 SVAKRVAEEV-GCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIM 601
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
+DEAHER+ +R +L++++ SAT ++ + S+YF +C I ++ G+ FP
Sbjct: 602 LDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFP 661
Query: 345 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE-KFDAP 403
V+V Y + Y+ + V ++H E G IL FLT + E++ CE +D
Sbjct: 662 VEVLY------SQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRV 715
Query: 404 SAVA--------LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 454
+ LP + L + Q +F+ P G RKV+FATN+AETS+TI G+ +V+D
Sbjct: 716 KTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDP 775
Query: 455 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-NQE 513
G K + + G+ L V +SQ+ ANQR GRAGRT PG+CYRLY++S F L N
Sbjct: 776 GFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTV 835
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
PEI R +L +L + A+GI D+ FDF+D P + A+ L L ++ + G +LT
Sbjct: 836 PEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLD-DEG--KLT 892
Query: 574 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 633
GK + ++P L + +LS + E +V M + ++F R D +++AD
Sbjct: 893 NLGKEMSLFPMDPTLSRSLLSSVDNQCSDE-IVTIISMLSVQNVFYR--PKDRQLEADSK 949
Query: 634 KVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEK 692
K +F H GD TLL+VY W E+ +C N ++ + L+R +D ++ +K
Sbjct: 950 KAKFHHPYGDHLTLLNVYTRWQQANYSEQ--YCKTNFLHFRHLKRARDVKSQISMIFKK 1006
Score = 181 (68.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/243 (25%), Positives = 116/243 (47%)
Query: 571 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 630
+LT GK + ++P L + +LS + E +V M + ++F R D +++A
Sbjct: 890 KLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDE-IVTIISMLSVQNVFYR--PKDRQLEA 946
Query: 631 DCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL 690
D K +F H GD TLL+VY W E+ +C N ++ + L+R +D +K + +
Sbjct: 947 DSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQ--YCKTNFLHFRHLKRARD-VKSQISMI 1003
Query: 691 EKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 750
K++ + + S +++ D +++ +S N A Q+GY+ G V +
Sbjct: 1004 FKKIGLKLISC-------HSDPDL-IRKTFVSGFFMNAAKRDS--QVGYKTINGGTEVGI 1053
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPS--PLFDVSMMERKK 808
HPS SL +G++ +V++ ++ + +Y+ VT+ + L + P D RKK
Sbjct: 1054 HPSSSL--YGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKK 1111
Query: 809 LHV 811
+
Sbjct: 1112 AKI 1114
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 798 (286.0 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 232/715 (32%), Positives = 374/715 (52%)
Query: 5 WESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----LK 58
WE+ L ++ + V D +E +L V + V ++G +V K +
Sbjct: 377 WETN----RMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIP 432
Query: 59 MKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL 118
+KD D +A ++ R GS+ + E ERKK K E+ ++ + +K
Sbjct: 433 VKDATSD-LAIIA-RKGSQ-TVRKHREQKERKKAQHKHWELAGTKLGDIMG-----VKKE 484
Query: 119 DDPQNVAKKESYDANVDVFRFEDCQRF-DWSRIQAFIVRE-CKR---LEDG--LPIYMYR 171
++P K + D VD +R E Q+F D + ++ E K+ LE LPI+ +
Sbjct: 485 EEPD---KAVTEDGKVD-YRTE--QKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAVQ 538
Query: 172 QDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVR 231
Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+S+A+RV
Sbjct: 539 QELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVS 598
Query: 232 EESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHE 290
EE G ++ + Y F ++ + YMTD LL+ + + DL S II+DEAHE
Sbjct: 599 EEMGGNLGEE--VGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 291 RSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
RS RR DL+L++ SAT DA + + +F + I H+ GR FPVD+ +
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILF- 715
Query: 351 PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DA 402
+ YV V+ +VH + G IL F+ + ++E ++ +A
Sbjct: 716 -----SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 403 PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESY 461
P+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDSG K
Sbjct: 771 PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 830
Query: 462 FEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVH 520
F P GM+ L++ +SQ++ANQR+GRAGRT PG+C+RLY++S ++ L PEI R +
Sbjct: 831 FNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTN 890
Query: 521 LGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 580
L VL + +LG++D+ F F+D P + ++ L LGA+ G LT G+ +V
Sbjct: 891 LANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LTSTGRLMV 947
Query: 581 KLGIEPRLGK-LILSCFRRRLGREGLVLAAV-MANASSIFCRVGSDDEKIKADCLKVQFC 638
+ ++P L K LI+SC +G +L V M + +IF R +E+ +D ++ +F
Sbjct: 948 EFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREEE--SDQIREKFA 1002
Query: 639 HRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
D T L+VY +W + WC ++ ++AK++R+ ++ +L+ + ++
Sbjct: 1003 VPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1055
Score = 198 (74.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 59/242 (24%), Positives = 118/242 (48%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + LT G+ +V+ ++P L K+++ E L++ + M +
Sbjct: 921 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLS 979
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ +D ++ +F D T L+VY +W + WC ++ ++A
Sbjct: 980 VPAIFYRPKGREEE--SDQIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHA 1035
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K++R+ ++ +L+ + ++ + + S T++D +++ I +A A G
Sbjct: 1036 KAMRKVREVRAQLKDIMVQQ-RMSLASCG-------TDWDI-VRKCICAAYFHQAAKLKG 1086
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L
Sbjct: 1087 IGE--YVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1144
Query: 794 CP 795
P
Sbjct: 1145 GP 1146
Score = 47 (21.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 226 LAQRVREES-RGCYEDDSVICYPSFSSAQHFDSK 258
L+ R R+ S RG Y DD+ + PS+ + D +
Sbjct: 248 LSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDR 281
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 798 (286.0 bits), Expect = 1.3e-76, P = 1.3e-76
Identities = 230/714 (32%), Positives = 369/714 (51%)
Query: 5 WESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----LK 58
WE+ L ++ + V D +E +L V + V ++G +V K +
Sbjct: 406 WETN----RMLTSGVVQRLEVDEDFEEDNAARVHLLVHNLVPPFLDGRIVFTKQPEPVIP 461
Query: 59 MKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL 118
+KD D +A +S R GS+ E ERKK K E+ ++ + + K
Sbjct: 462 VKDATSD-MAIIS-RKGSQ-LVRRHREQKERKKAQHKHWELAGTKLGDIMG----IQKKE 514
Query: 119 DDPQNVAKKESYDANVDVFRFEDCQRF-----DWSRIQAFIVRECKRLEDG--LPIYMYR 171
D + A E D VD +R E Q+F + S + ++ LE LPI+ R
Sbjct: 515 DGGDSKAVGE--DGKVD-YRAE--QKFADHMKEKSEASSDFAKKKTLLEQRQYLPIFAVR 569
Query: 172 QDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVR 231
Q +L I I++++GETG GK+TQL Q+L + G + + CTQPR++AA+S+A+RV
Sbjct: 570 QQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVS 629
Query: 232 EESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHE 290
EE ++ + Y F + + YMTD LL+ + + DL S +I+DEAHE
Sbjct: 630 EEMNSNLGEE--VGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHE 687
Query: 291 RSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
RS RR DL+L++ SAT D+ + + +F + I H+ GR FPVD+ +
Sbjct: 688 RSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILF- 746
Query: 351 PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DA 402
+ YV V+ ++H + G IL F+ + ++E ++ +A
Sbjct: 747 -----SKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENA 801
Query: 403 PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESY 461
P+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FV+DSG K
Sbjct: 802 PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKV 861
Query: 462 FEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVH 520
F P GM+ L+V +SQ++ANQRAGRAGRT PG+CYRLY++S F+ L PEI R +
Sbjct: 862 FNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTN 921
Query: 521 LGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 580
L VL + +LG++D+ F F+D P + ++ L LGA+ N G LT G+ +V
Sbjct: 922 LANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALD-NTGA--LTPTGRLMV 978
Query: 581 KLGIEPRLGK-LILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH 639
+ ++P L K LI+SC + L++ + M + SIF R +E+ +D ++ +F
Sbjct: 979 EFPLDPALSKMLIVSC-DMSCSADILIIVS-MLSVPSIFYRPKGREEE--SDQVREKFSV 1034
Query: 640 RNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
D T L+VY +W + + WC ++ ++ K++R+ ++ +L+ + ++
Sbjct: 1035 PESDHLTYLNVYLQWKN--NNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQ 1086
Score = 195 (73.7 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 55/242 (22%), Positives = 115/242 (47%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + LT G+ +V+ ++P L K+++ + L++ + M +
Sbjct: 952 LNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVS-MLS 1010
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
SIF R +E+ +D ++ +F D T L+VY +W + + WC ++ ++
Sbjct: 1011 VPSIFYRPKGREEE--SDQVREKFSVPESDHLTYLNVYLQWKN--NNYSSIWCNDHFIHT 1066
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K++R+ ++ +L+ + ++ +I W+ +++ I +A A G
Sbjct: 1067 KAMRKVREVRAQLKDIMVQQKMNLISCGSDWDV---------IRKCICAAYFHQAAKLKG 1117
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ +L G P ++++ EL+ +Y+ CVTA D + L+ L
Sbjct: 1118 IGE--YVNVRTGMPCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAEL 1175
Query: 794 CP 795
P
Sbjct: 1176 GP 1177
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 796 (285.3 bits), Expect = 1.8e-76, P = 1.8e-76
Identities = 231/715 (32%), Positives = 374/715 (52%)
Query: 5 WESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----LK 58
WE+ L ++ + V D +E +L V + V ++G +V K +
Sbjct: 376 WETN----RMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIP 431
Query: 59 MKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL 118
+KD D +A ++ R GS+ + E ERKK K E+ ++ + +K
Sbjct: 432 VKDATSD-LAIIA-RKGSQ-TVRKHREQKERKKAQHKHWELAGTKLGDIMG-----VKKE 483
Query: 119 DDPQNVAKKESYDANVDVFRFEDCQRF-DWSRIQAFIVRE-CKR---LEDG--LPIYMYR 171
++P K + D VD +R E Q+F D + ++ E K+ LE LPI+ +
Sbjct: 484 EEPD---KALTEDGKVD-YRTE--QKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQ 537
Query: 172 QDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVR 231
Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+S+A+RV
Sbjct: 538 QELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVS 597
Query: 232 EESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHE 290
EE G ++ + Y F ++ + YMTD LL+ + + DL S +I+DEAHE
Sbjct: 598 EEMGGNLGEE--VGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIMDEAHE 655
Query: 291 RSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
RS RR DL+L++ SAT DA + + +F + I H+ GR FPVD+ +
Sbjct: 656 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILF- 714
Query: 351 PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DA 402
+ YV V+ +VH + G IL F+ + ++E ++ +A
Sbjct: 715 -----SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 769
Query: 403 PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESY 461
P+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDSG K
Sbjct: 770 PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 829
Query: 462 FEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVH 520
F P GM+ L++ +SQ++ANQR+GRAGRT PG+C+RLY++S ++ L PEI R +
Sbjct: 830 FNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTN 889
Query: 521 LGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 580
L VL + +LG++D+ F F+D P + ++ L LGA+ G LT G+ +V
Sbjct: 890 LANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LTSTGRLMV 946
Query: 581 KLGIEPRLGK-LILSCFRRRLGREGLVLAAV-MANASSIFCRVGSDDEKIKADCLKVQFC 638
+ ++P L K LI+SC +G +L V M + +IF R +E+ +D ++ +F
Sbjct: 947 EFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREEE--SDQIREKFA 1001
Query: 639 HRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
D T L+VY +W + WC ++ ++AK++R+ ++ +L+ + ++
Sbjct: 1002 VPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1054
Score = 198 (74.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 59/242 (24%), Positives = 118/242 (48%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + LT G+ +V+ ++P L K+++ E L++ + M +
Sbjct: 920 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLS 978
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ +D ++ +F D T L+VY +W + WC ++ ++A
Sbjct: 979 VPAIFYRPKGREEE--SDQIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHA 1034
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K++R+ ++ +L+ + ++ + + S T++D +++ I +A A G
Sbjct: 1035 KAMRKVREVRAQLKDIMVQQ-RMSLASCG-------TDWDI-VRKCICAAYFHQAAKLKG 1085
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L
Sbjct: 1086 IGE--YVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1143
Query: 794 CP 795
P
Sbjct: 1144 GP 1145
Score = 38 (18.4 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 227 AQRVREES-RGCYEDDSVICYPSFSSAQHFDSK 258
+ R R+ S R Y DD+ + PS+ + D +
Sbjct: 248 SSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDR 280
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 794 (284.6 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 231/715 (32%), Positives = 373/715 (52%)
Query: 5 WESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----LK 58
WE+ L ++ + V D +E +L V + V ++G +V K +
Sbjct: 377 WETN----RMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIP 432
Query: 59 MKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYL 118
+KD D +A ++ R GS+ + E ERKK K E+ ++ + +K
Sbjct: 433 VKDATSD-LAIIA-RKGSQ-TVRKHREQKERKKAQHKHWELAGTKLGDIMG-----VKKE 484
Query: 119 DDPQNVAKKESYDANVDVFRFEDCQRF-DWSRIQAFIVRE-CKR---LEDG--LPIYMYR 171
++P K + D VD +R E Q+F D + ++ E K+ LE LPI+ +
Sbjct: 485 EEPD---KSLTEDGKVD-YRTE--QKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQ 538
Query: 172 QDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVR 231
Q++L I I++++GETG GK+TQL Q+L + G I CTQPR++AA+S+A+RV
Sbjct: 539 QELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVS 598
Query: 232 EESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHE 290
EE G ++ + Y F + + YMTD LL+ + + DL S II+DEAHE
Sbjct: 599 EEMGGNLGEE--VGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 291 RSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
RS RR DL+L++ SAT DA + + +F + I H+ GR FPVD+ +
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILF- 715
Query: 351 PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DA 402
+ YV V+ +VH + G IL F+ + ++E ++ +A
Sbjct: 716 -----SKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 403 PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESY 461
P+ LP + QL D Q +F+ P G RK I ATN+AETSLT+ G+ FVIDSG K
Sbjct: 771 PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 830
Query: 462 FEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVH 520
F P GM+ L++ +SQ++ANQR+GRAGRT PG+C+RLY++S ++ L PEI R +
Sbjct: 831 FNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTN 890
Query: 521 LGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 580
L VL + +LG++D+ F F+D P + ++ L LGA+ G LT G+ +V
Sbjct: 891 LANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG---LTSTGRLMV 947
Query: 581 KLGIEPRLGK-LILSCFRRRLGREGLVLAAV-MANASSIFCRVGSDDEKIKADCLKVQFC 638
+ ++P L K LI+SC +G +L V M + +IF R +E+ +D ++ +F
Sbjct: 948 EFPLDPALSKMLIVSC---DMGCSSEILLIVSMLSVPAIFYRPKGREEE--SDQIREKFA 1002
Query: 639 HRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
D + L+VY +W + WC ++ ++AK++R+ ++ +L+ + ++
Sbjct: 1003 VPESDHLSYLNVYLQWKN--NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1055
Score = 194 (73.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 58/242 (23%), Positives = 118/242 (48%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + LT G+ +V+ ++P L K+++ E L++ + M +
Sbjct: 921 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLS 979
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ +D ++ +F D + L+VY +W + WC ++ ++A
Sbjct: 980 VPAIFYRPKGREEE--SDQIREKFAVPESDHLSYLNVYLQWKN--NNYSTIWCNDHFIHA 1035
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K++R+ ++ +L+ + ++ + + S T++D +++ I +A A G
Sbjct: 1036 KAMRKVREVRAQLKDIMVQQ-RMSLASCG-------TDWDI-VRKCICAAYFHQAAKLKG 1086
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L
Sbjct: 1087 IGE--YVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1144
Query: 794 CP 795
P
Sbjct: 1145 GP 1146
Score = 47 (21.6 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 56 WLKMKDDKCDEIANVSNRLG-----SRNSYAVFCELNERKKGLFKER-EMIMRRVREFKN 109
W + KDD+ D A S++ G R+ + E G+ +E E +R RE +
Sbjct: 82 WEESKDDQRDAEAEDSDQAGRSGRKDRHYRSARVETPSHPGGVSEEFWERSRQRERERRE 141
Query: 110 GMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSR 149
H V D ++ K+ S D + D R D +R D SR
Sbjct: 142 --HGVYASSKDEKDRKKERSRDRDCDRKRDRD-ER-DRSR 177
Score = 38 (18.4 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 227 AQRVREES-RGCYEDDSVICYPSFSSAQHFDSK 258
+ R R+ S R Y DD+ + PS+ + D +
Sbjct: 249 SSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDR 281
Score = 37 (18.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 475 RVSQSSANQRAGRAGRTEPGRCYR 498
R +++ + +AGR+GR + R YR
Sbjct: 90 RDAEAEDSDQAGRSGRKD--RHYR 111
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 794 (284.6 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 213/625 (34%), Positives = 333/625 (53%)
Query: 95 KEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKE------SYDANVDVFRFEDCQRF--- 145
K RE RR + K+ K L D V K+E + D VD +R E Q+F
Sbjct: 454 KHREQKERRKAQHKHWELAGTK-LGDIMGVKKEEEPDKAMTEDGKVD-YRTE--QKFADH 509
Query: 146 --DWSRIQAFIVRECKRLEDG--LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF 201
+ S + ++ LE LPI+ +Q++L I I++++GETG GK+TQL Q+
Sbjct: 510 MKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 569
Query: 202 LADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVI 260
L G I CTQPR++AA+S+A+RV EE G ++ + Y F ++ +
Sbjct: 570 LHQDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEE--VGYAIRFEDCTSENTLIK 627
Query: 261 YMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSAT 320
YMTD LL+ + + DL S II+DEAHERS RR DL+L++ SAT
Sbjct: 628 YMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSAT 687
Query: 321 ADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKE 380
DA + + +F + I H+ GR FPVD+ + + YV V+ +VH +
Sbjct: 688 MDADKFAAFFGNVPIFHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP 741
Query: 381 GTILAFLTSKMEVEWACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRK 431
G IL F+ + ++E ++ +AP+ LP + QL D Q +F+ P G RK
Sbjct: 742 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 801
Query: 432 VIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRT 491
I ATN+AETSLT+ G+ FVIDSG K F P GM+ L++ +SQ++ANQR+GRAGRT
Sbjct: 802 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 861
Query: 492 EPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAI 550
PG+C+RLY++S ++ L PEI R +L VL + +LG++D+ F F+D P +
Sbjct: 862 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNM 921
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILSCFRRRLGREGLVLAA 609
++ L LGA+ G LT G+ +V+ ++P L K LI+SC +G +L
Sbjct: 922 LNSMYQLWILGALDNTGG---LTSTGRLMVEFPLDPALSKMLIVSC---DMGCSSEILLI 975
Query: 610 V-MANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWE 668
V M + +IF R +E+ +D ++ +F D T L+VY +W + WC +
Sbjct: 976 VSMLSVPAIFYRPKGREEE--SDQIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCND 1031
Query: 669 NSVNAKSLRRCQDTIKELETCLEKE 693
+ ++AK++R+ ++ +L+ + ++
Sbjct: 1032 HFIHAKAMRKVREVRAQLKDIMVQQ 1056
Score = 198 (74.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 59/242 (24%), Positives = 118/242 (48%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + LT G+ +V+ ++P L K+++ E L++ + M +
Sbjct: 922 LNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLS 980
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ +D ++ +F D T L+VY +W + WC ++ ++A
Sbjct: 981 VPAIFYRPKGREEE--SDQIREKFAVPESDHLTYLNVYLQWKN--NNYSTIWCNDHFIHA 1036
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K++R+ ++ +L+ + ++ + + S T++D +++ I +A A G
Sbjct: 1037 KAMRKVREVRAQLKDIMVQQ-RMSLASCG-------TDWDI-VRKCICAAYFHQAAKLKG 1087
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L
Sbjct: 1088 IGE--YVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1145
Query: 794 CP 795
P
Sbjct: 1146 GP 1147
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 772 (276.8 bits), Expect = 5.4e-76, P = 5.4e-76
Identities = 211/620 (34%), Positives = 334/620 (53%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSIVCTQ 217
KR+ LP++ Y+ D +R + Q +VL+GETG GK+TQ+ Q+ D ++ + + CTQ
Sbjct: 68 KRI--ALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCTQ 125
Query: 218 PRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRD 276
PR++AA+S+AQRV EE ++ + Y F + + YMTD LL+ M+D
Sbjct: 126 PRRVAAMSVAQRVSEEMDVKLGEE--VGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPM 183
Query: 277 LSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGIS 336
L + I++DEAHER+ +R DL+LV+MSAT DA + +YF + +
Sbjct: 184 LDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLM 243
Query: 337 HVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWA 396
V GR PV++ Y P A + M E+ EG IL FLT + E+E A
Sbjct: 244 KVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEI-----EGDILMFLTGQEEIEEA 298
Query: 397 CEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYP-----GR--RKVIFATNVAE 440
C++ + S + +P + L + Q +F+ P G RKV+ +TN+AE
Sbjct: 299 CKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAE 358
Query: 441 TSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLY 500
TSLTI GV FVID G K+ + P + L V +S++SA QR+GRAGRT PG+C+RLY
Sbjct: 359 TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLY 418
Query: 501 SKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQ 559
++ F+ N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 419 TEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY 478
Query: 560 LGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFC 619
L A+ ++G LT+ G + + ++P+L K++++ + E L + A+++ C
Sbjct: 479 LAALD-DDG--NLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQ---C 532
Query: 620 RVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRC 679
V ++ K AD K++F H +GD TLL+VY + E+ N WC+EN +N +SL+
Sbjct: 533 FVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ-SSEDPN-WCYENFINFRSLKSA 590
Query: 680 QDTIKELETCLEKELAIIIPSYWLWNPH-KYTEYDKWLKEIILSALAENVAMFSGY-DQL 737
D +++ +LA I+ + L ++T D ++ I AL + M + ++
Sbjct: 591 -DNVRQ-------QLARIMDRFNLRRTSTEFTSKDYYVN--IRKALVQGFFMQVAHLERT 640
Query: 738 GYEVAMT-GQHVQLHPSCSL 756
GY + + Q+VQLHPS L
Sbjct: 641 GYYLTIKDNQNVQLHPSTCL 660
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 785 (281.4 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 234/750 (31%), Positives = 375/750 (50%)
Query: 4 LWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----L 57
LWE+ N H + + + DE +E + V + V ++G +V K +
Sbjct: 284 LWEN--NRLHRSGVVAMADELSSIFEDETDENRVTILVQNIVPPFLDGRIVFTKQAQPII 341
Query: 58 KMKDDKCDEIANVSNRLGSRNSYAVFC--ELNERKKGLFKEREMIMRRVREFKNGMHCVL 115
+ D CD +A VS +R S AV E+ +RKK K E+ ++ V
Sbjct: 342 PVVDTTCD-MA-VS---AARGSVAVRKRREVEDRKKAQDKHWELAGSKLGNLMG----VK 392
Query: 116 KYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIV-RECKRLEDGLPIYMYRQDI 174
+ D+ + +S + + +F + D + F + + K+ + LP++ RQ +
Sbjct: 393 EKKDETADPEDDDSGNYK-ESHQFASHMK-DNEAVSDFAMEKSIKQQREYLPVFACRQKM 450
Query: 175 LRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREES 234
+ I +++++GETG GK+TQL Q+L + G I CTQPR++AA+S+A+RV +E
Sbjct: 451 MNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEM 510
Query: 235 RGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXX 294
G V F + + YMTD LL+ + D L + S II+DEAHERS
Sbjct: 511 -GVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLN 569
Query: 295 XXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY-DCGISHVVGRNFPVDVRYVPCA 353
+R DL+L++ SAT DA + + +F +C + GR FPV++ +
Sbjct: 570 TDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHA--- 626
Query: 354 TAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DAPSA 405
+ V YV V+ +H +G IL F+ + ++E CE +AP
Sbjct: 627 ---RTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPL 683
Query: 406 VALPFHGQLSFDEQFCVFKSYPG-RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEP 464
LP + QL D Q +F+ PG RK I ATN+AETSLT+ G+ FVID G K + P
Sbjct: 684 AVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNP 743
Query: 465 GTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGI 523
GM+ L + VSQ+SANQR GRAGRT PG+CYRLY++ F+ L PEI R +L
Sbjct: 744 RIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLAN 803
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLG 583
VL + +LG+ D+ F F+DAP + ++ L LGA+ N G +LT G+ +V+
Sbjct: 804 VVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALD-NTG--QLTPMGRKMVEFP 860
Query: 584 IEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGD 643
++P L K+++ E L + + M + +IF R +E+ AD K +F D
Sbjct: 861 LDPTLSKMLIMSAEMGCSDEVLTIVS-MLSVPAIFFRPKGREEE--ADAKKEKFQVPESD 917
Query: 644 LFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWL 703
T L+VY +W + + KWC +N ++ K+L++ ++ +L+ ++ +L + + S
Sbjct: 918 HLTFLNVYIQWRT--HKYSAKWCADNYLHVKALKKVREVRAQLKEIMQ-DLKLPLIS--- 971
Query: 704 WNPHKYTEYDKWLKEIILSALAENVAMFSG 733
+E+D +++ I SA N A G
Sbjct: 972 ----NGSEWDI-VRKCICSAYFHNAARLKG 996
Score = 211 (79.3 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 70/255 (27%), Positives = 127/255 (49%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + +LT G+ +V+ ++P L K+++ E L + + M +
Sbjct: 831 LNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS-MLS 889
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ AD K +F D T L+VY +W + + KWC +N ++
Sbjct: 890 VPAIFFRPKGREEE--ADAKKEKFQVPESDHLTFLNVYIQWRT--HKYSAKWCADNYLHV 945
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K+L++ ++ +L+ ++ +L + + S N +E+D +++ I SA N A G
Sbjct: 946 KALKKVREVRAQLKEIMQ-DLKLPLIS----NG---SEWDI-VRKCICSAYFHNAARLKG 996
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ +L G P +VV+ EL+ +Y+ CVTA D L+ L
Sbjct: 997 IGE--YVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAEL 1054
Query: 794 CPSPLFDVSMMERKK 808
P+F S+ E K+
Sbjct: 1055 --GPMF-YSIKESKQ 1066
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 785 (281.4 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 234/750 (31%), Positives = 375/750 (50%)
Query: 4 LWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH-VKGLMEGELV-NKW----L 57
LWE+ N H + + + DE +E + V + V ++G +V K +
Sbjct: 284 LWEN--NRLHRSGVVAMADELSSIFEDETDENRVTILVQNIVPPFLDGRIVFTKQAQPII 341
Query: 58 KMKDDKCDEIANVSNRLGSRNSYAVFC--ELNERKKGLFKEREMIMRRVREFKNGMHCVL 115
+ D CD +A VS +R S AV E+ +RKK K E+ ++ V
Sbjct: 342 PVVDTTCD-MA-VS---AARGSVAVRKRREVEDRKKAQDKHWELAGSKLGNLMG----VK 392
Query: 116 KYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIV-RECKRLEDGLPIYMYRQDI 174
+ D+ + +S + + +F + D + F + + K+ + LP++ RQ +
Sbjct: 393 EKKDETADPEDDDSGNYK-ESHQFASHMK-DNEAVSDFAMEKSIKQQREYLPVFACRQKM 450
Query: 175 LRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREES 234
+ I +++++GETG GK+TQL Q+L + G I CTQPR++AA+S+A+RV +E
Sbjct: 451 MNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEM 510
Query: 235 RGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXX 294
G V F + + YMTD LL+ + D L + S II+DEAHERS
Sbjct: 511 -GVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLN 569
Query: 295 XXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY-DCGISHVVGRNFPVDVRYVPCA 353
+R DL+L++ SAT DA + + +F +C + GR FPV++ +
Sbjct: 570 TDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHA--- 626
Query: 354 TAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF--------DAPSA 405
+ V YV V+ +H +G IL F+ + ++E CE +AP
Sbjct: 627 ---RTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAPPL 683
Query: 406 VALPFHGQLSFDEQFCVFKSYPG-RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEP 464
LP + QL D Q +F+ PG RK I ATN+AETSLT+ G+ FVID G K + P
Sbjct: 684 AVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNP 743
Query: 465 GTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGI 523
GM+ L + VSQ+SANQR GRAGRT PG+CYRLY++ F+ L PEI R +L
Sbjct: 744 RIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLAN 803
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLG 583
VL + +LG+ D+ F F+DAP + ++ L LGA+ N G +LT G+ +V+
Sbjct: 804 VVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALD-NTG--QLTPMGRKMVEFP 860
Query: 584 IEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGD 643
++P L K+++ E L + + M + +IF R +E+ AD K +F D
Sbjct: 861 LDPTLSKMLIMSAEMGCSDEVLTIVS-MLSVPAIFFRPKGREEE--ADAKKEKFQVPESD 917
Query: 644 LFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWL 703
T L+VY +W + + KWC +N ++ K+L++ ++ +L+ ++ +L + + S
Sbjct: 918 HLTFLNVYIQWRT--HKYSAKWCADNYLHVKALKKVREVRAQLKEIMQ-DLKLPLIS--- 971
Query: 704 WNPHKYTEYDKWLKEIILSALAENVAMFSG 733
+E+D +++ I SA N A G
Sbjct: 972 ----NGSEWDI-VRKCICSAYFHNAARLKG 996
Score = 211 (79.3 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 70/255 (27%), Positives = 127/255 (49%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ ++ QL + + +LT G+ +V+ ++P L K+++ E L + + M +
Sbjct: 831 LNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS-MLS 889
Query: 614 ASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNA 673
+IF R +E+ AD K +F D T L+VY +W + + KWC +N ++
Sbjct: 890 VPAIFFRPKGREEE--ADAKKEKFQVPESDHLTFLNVYIQWRT--HKYSAKWCADNYLHV 945
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
K+L++ ++ +L+ ++ +L + + S N +E+D +++ I SA N A G
Sbjct: 946 KALKKVREVRAQLKEIMQ-DLKLPLIS----NG---SEWDI-VRKCICSAYFHNAARLKG 996
Query: 734 YDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
+ Y TG LHP+ +L G P +VV+ EL+ +Y+ CVTA D L+ L
Sbjct: 997 IGE--YVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAEL 1054
Query: 794 CPSPLFDVSMMERKK 808
P+F S+ E K+
Sbjct: 1055 --GPMF-YSIKESKQ 1066
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 781 (280.0 bits), Expect = 6.3e-75, P = 6.3e-75
Identities = 223/696 (32%), Positives = 352/696 (50%)
Query: 27 SDADELEERLRNLFVDHVKG-LMEG-ELVNKWL----KMKDDKCDEIANVSNRLGSRNSY 80
SD +EER +L VD ++ ++G E +K + ++D + D N RLGSR
Sbjct: 362 SDYSLMEERRVHLLVDELRPHFLDGAEFSSKKVGDITSVRDPQSDLAINA--RLGSRL-- 417
Query: 81 AVFCELNERKKGLFKEREMIMRRVREFKN-GMHCVLKYLDDPQNVAKKESYDANVDVFRF 139
+ ER++ F+ER+ + V+ D AK + V R
Sbjct: 418 -----VRERRE--FRERQKAASAATSLAGTSLGNVMGLKDSNDEDAKAGTTPVKV-AGRS 469
Query: 140 EDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLV 199
E + D + RE + LP + R+ +L I Q+L+++GETG GK+TQL
Sbjct: 470 EQSNKKDTEFARTKSYREQREF---LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLA 526
Query: 200 QFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKV 259
QFL + G I CTQPR++AA+S+A+RV EE G +V F D+ +
Sbjct: 527 QFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEM-GVRLGSTVGYSIRFEDVTGPDTVI 585
Query: 260 IYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSA 319
YMTD LL+ + +L + S II+DEAHERS RR D++L++ SA
Sbjct: 586 KYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSA 645
Query: 320 TADAHQLSKYFYDCGISHVVGRNFPVDVRYV--PCATAGTSAVASYVSDVVRMVGEVHTT 377
T ++ + S +F + GR +PVD+ + PC+ YV VR V ++H +
Sbjct: 646 TMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCS--------DYVEAAVRQVLQIHLS 697
Query: 378 EKEGTILAFLTSKMEVEWACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSY-PG 428
+ G IL F+T + ++E CE DAP LP + Q+ D Q +F S PG
Sbjct: 698 QPAGDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFDSAEPG 757
Query: 429 RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRA 488
RKV+ ATN+AETSLT+ G+ +V+D+G K + G++ L+V +SQ++ANQRAGRA
Sbjct: 758 VRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRA 817
Query: 489 GRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSA 547
GRT PG YRLY++ + PEI R +L VL + +LG+ ++ FDF+D P
Sbjct: 818 GRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPN 877
Query: 548 KAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVL 607
+ ++ L LGA+ N G +LT GK + ++P L KLI+ + E + +
Sbjct: 878 DTLMASLYELWTLGALD-NFG--KLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITI 934
Query: 608 AAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCW 667
+ M + S+F R E+ +D + +F D LL++Y+ W N WC
Sbjct: 935 VS-MLSVPSVFYRPKERAEE--SDAAREKFNVPESDHLMLLNIYQHWQR--NGYSNSWCS 989
Query: 668 ENSVNAKSLRRCQDTIKELETCLEKE-LAIIIPSYW 702
++ +++K+L+R +D ++L + K+ +++ S W
Sbjct: 990 KHFLHSKTLKRARDIRQQLVEIMSKQKISLESVSDW 1025
Score = 138 (53.6 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 44/184 (23%), Positives = 84/184 (45%)
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREER 662
E ++ M + S+F R E+ +D + +F D LL++Y+ W
Sbjct: 929 EEIITIVSMLSVPSVFYRPKERAEE--SDAAREKFNVPESDHLMLLNIYQHWQR--NGYS 984
Query: 663 NKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILS 722
N WC ++ +++K+L+R +D ++L + K+ I + S W+ ++ ++ S
Sbjct: 985 NSWCSKHFLHSKTLKRARDIRQQLVEIMSKQ-KISLESVSDWDI---------VRRVLCS 1034
Query: 723 ALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCV 782
A A G + Y +G LH + SL G P +V++ EL+ + +Y+ V
Sbjct: 1035 AYFHQAACAKGIGE--YVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIV 1092
Query: 783 TAFD 786
T+ D
Sbjct: 1093 TSVD 1096
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 761 (272.9 bits), Expect = 8.7e-75, P = 8.7e-75
Identities = 194/604 (32%), Positives = 311/604 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI+ + ++I +++V++GETG GKSTQ+ QFL + A E + TQPR++AA+
Sbjct: 96 LPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAV 155
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
+LA+RV E +GC + V F +++ Y+TD LL+ +ND LS+ +I
Sbjct: 156 NLAKRVAAE-QGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLI 214
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
+DEAHER+ +R LR++IMSAT +A + S++F I ++ GR +P
Sbjct: 215 LDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYP 274
Query: 345 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF---- 400
V + Y + Y+ +R + ++HT G IL FLT + E+E A E
Sbjct: 275 VQIHYT------YTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIE-ALEALIKSY 327
Query: 401 ------DAPSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVID 453
+ P A P L ++Q VF + RKV+ +TN+AETS+TI G+++VID
Sbjct: 328 SKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
+G+ K F G+ L V +SQS+A QR+GRAGR G+CYR+Y+++DF+ P
Sbjct: 388 TGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETI 447
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
PEI R+ L AVL + A G DV F ++D PS + + A+ +L +GA+ +NG +
Sbjct: 448 PEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALD-DNG--HIN 504
Query: 574 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCL 633
+ G + + + P L + +L+ E + + + ++ S DE I+A
Sbjct: 505 DLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEA--- 561
Query: 634 KVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLEK 692
+++F H GDL T L+ R++ + R +WC +N +N ++L+ D K+L E CL+
Sbjct: 562 RLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKD 621
Query: 693 ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHP 752
W N + L LS N A+ + Y + Q + +HP
Sbjct: 622 G--------WELNSSPEVNSENLLLSF-LSGYITNTALL--HPDGSYRTIIGNQTISIHP 670
Query: 753 SCSL 756
S SL
Sbjct: 671 SSSL 674
Score = 163 (62.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 58/246 (23%), Positives = 107/246 (43%)
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAV 610
E +R L L +I + + + G + + + P L + +L+ E + + +
Sbjct: 482 EGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSC 541
Query: 611 MANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENS 670
++ S DE I+A +++F H GDL T L+ R++ + R +WC +N
Sbjct: 542 LSTDSMFLFPQEKRDEAIEA---RLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNF 598
Query: 671 VNAKSLRRCQDTIKEL-ETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVA 729
+N ++L+ D K+L E CL+ W N + L LS N A
Sbjct: 599 INRRALKTILDIRKQLREHCLKDG--------WELNSSPEVNSENLLLSF-LSGYITNTA 649
Query: 730 MFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 789
+ + Y + Q + +HPS SL FG+K +++ EL+ Y+ V++ +
Sbjct: 650 LL--HPDGSYRTIIGNQTISIHPSSSL--FGKKVEAIMYHELVFTTKSYVRGVSSIRSNW 705
Query: 790 LSTLCP 795
L+ + P
Sbjct: 706 LNAVAP 711
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 22 HVVVPSDADELEERLRNLFVDHVKGLMEGELV 53
H + D L+ LR +F H K L G+++
Sbjct: 278 HYTYTPEPDYLDACLRTIFQLHTK-LPPGDIL 308
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 758 (271.9 bits), Expect = 1.8e-74, P = 1.8e-74
Identities = 210/642 (32%), Positives = 330/642 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI+ R +L ++ G + VLIGETG GK+TQ+ Q+L ++GI + I TQPR++AAI
Sbjct: 24 LPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRRVAAI 83
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
SLA RV +E R E ++ Y F ++++ ++TD LL+ + D L + S +
Sbjct: 84 SLATRVSDEKRT--ELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYSVV 141
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDL-----RLVIMSATADAHQLSKYFYDCGISHV 338
I+DEAHER+ +R +L ++++MSAT D Q S+YF + ++
Sbjct: 142 ILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVLYL 201
Query: 339 VGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEW-- 395
GR P+ V Y + Y+ + V ++H IL FLT + E+E
Sbjct: 202 EGRQHPIQVFYTK------QPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMT 255
Query: 396 -ACEKF-----DA-PSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPG 447
C D P +P + L + +Q VF++ P G RKVI +TN+AETS+TI G
Sbjct: 256 KTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISG 315
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+K+V+D+GMVK + P G+ VL V RVS++ A QR GRAGR + G CYRLY++ +FE
Sbjct: 316 IKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFEK 375
Query: 508 RPLNQEPEIH---RVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
PEI R +L +L++LAL I ++ FDF+ PS AI+ AI L LGA++
Sbjct: 376 FDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVE 435
Query: 565 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSD 624
LT G+ + +EP+ K IL + E L + ++++ S ++
Sbjct: 436 QKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARR 495
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
DE ++ +F GD TLL+VYR + ++ + +WC EN VN +++ D
Sbjct: 496 DE---VQSVRKKFISSEGDHLTLLNVYRAFKNVSGNK--EWCKENFVNGRNMMLVSDVRA 550
Query: 685 EL-ETCLEKELAIIIPSYWLWNPHKYTEYDKW-LKEIILSALAENVAMFSGYDQLGYEVA 742
+L + C++ + P + + D ++ + +L N A D Y
Sbjct: 551 QLRDICVKLSM-----------PMESSRSDTANIRRCLAHSLFMNAAELQP-DGT-YSTV 597
Query: 743 MTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYL--VCV 782
+ Q V +HPS ++F KP+ VV+ LL N Y+ +CV
Sbjct: 598 NSHQLVAIHPSS--VLFHCKPSCVVYNGLLHTNKCYMRDLCV 637
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 758 (271.9 bits), Expect = 1.8e-74, P = 1.8e-74
Identities = 209/624 (33%), Positives = 327/624 (52%)
Query: 159 KRLEDGLPIYMYRQ---DILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQS 212
KRL+ LP++ Y++ DIL R Q VL+GETG GK+TQ+ Q+ D S ++
Sbjct: 107 KRLQ--LPVWEYKERFNDILNR---HQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRG 161
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
+ CTQPR++AA+S+AQRV +E + + Y F + + YMTD LL+
Sbjct: 162 VACTQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREA 219
Query: 272 MNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY 331
MND L R II+DEAHER+ +R DL++++MSAT DA + YF
Sbjct: 220 MNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFD 279
Query: 332 DCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKM 391
+C + + GR PV++ Y P + + + V+++ E EG +L FLT +
Sbjct: 280 NCPLLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEDEGDVLLFLTGQE 334
Query: 392 EVEWACEKF---------DAPSAVALPFHGQLSFDEQFCVFKSYPGR-------RKVIFA 435
E++ AC++ D +P + L +Q +F+ P R RKV+ +
Sbjct: 335 EIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVS 394
Query: 436 TNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGR 495
TN+AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+
Sbjct: 395 TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK 454
Query: 496 CYRLYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAI 554
C+RLY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+
Sbjct: 455 CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL 514
Query: 555 RNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANA 614
L L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 515 ELLNYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVP 571
Query: 615 SSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAK 674
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +
Sbjct: 572 Q---CFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYR 626
Query: 675 SLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY 734
SL + ++L +++ +P ++T D ++ I AL M +
Sbjct: 627 SLMSADNVRQQLSRIMDR---FNLPR----RSTEFTSRDYYIN--IRRALVTGFFMQVAH 677
Query: 735 -DQLG-YEVAMTGQHVQLHPSCSL 756
++ G Y Q VQLHPS L
Sbjct: 678 LERTGHYLTVKDNQVVQLHPSTVL 701
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 752 (269.8 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 205/621 (33%), Positives = 325/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y++ + Q VL+GETG GK+TQ+ Q+ D S ++ + C
Sbjct: 100 KRLQ--LPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVAC 157
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 158 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 215
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 216 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCP 275
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 276 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 330
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 331 EACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 390
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 391 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 450
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 451 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 510
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 511 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 565
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 566 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 622
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 623 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 673
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 674 TGHYLTVKDNQVVQLHPSTVL 694
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 416 (151.5 bits), Expect = 9.9e-74, Sum P(2) = 9.9e-74
Identities = 101/286 (35%), Positives = 158/286 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI +R+ ++R + L++ GETG GKSTQL ++L ++G+A +I TQPR++A I
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+AQRV EE GC SV+ Y F ++ + YMTD CLL+H + D LS+ S I
Sbjct: 61 SVAQRVAEEM-GCALG-SVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSII 118
Query: 284 IVDEAHERSXXXXXXXXXXXXXXC------RRFDLRLVIMSATADAHQLSKYFYDCGISH 337
I+DEAHERS R+ ++++V+MSAT + +LS++F C + H
Sbjct: 119 ILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLH 178
Query: 338 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 397
+ GR++PV + + + ++YV++ V++ ++H E EG IL FLT ++E+E AC
Sbjct: 179 IPGRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKAC 238
Query: 398 -------EKFD---------APSAVALPFHGQLSFDEQFCVFKSYP 427
E D + LP +G +S D+Q +F P
Sbjct: 239 DLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPAP 284
Score = 413 (150.4 bits), Expect = 9.9e-74, Sum P(2) = 9.9e-74
Identities = 127/462 (27%), Positives = 223/462 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFKSY 426
+V + G++ EK +L ++ + + LP +G +S D+Q +F
Sbjct: 225 LVFLTGQIEI-EKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMSTDQQKRIFLPA 283
Query: 427 P-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
P G RK + +TN+A TSLTI GV++V+DSG VK+ P G+++L V +S+S A QRA
Sbjct: 284 PKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAMQRA 343
Query: 486 GRAGRTEPGRCYRLYSKSDFET-RPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDA 544
GRAGRT G+ YRLYS +E P + PEI R L +L + L + DV F ++D
Sbjct: 344 GRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDR 403
Query: 545 PSAKAIEMAIRNLVQLGAI-KLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P + I A++ L Q AI + G +T G+FLV+ + P L ++ L E
Sbjct: 404 PEERHILEALKQLYQCDAIDRTRRG--HVTRLGEFLVQFPLPPNLSCAVIKA--ASLDCE 459
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
++L A M + ++F R G ++ +A+ + + G D TLL+++ + +
Sbjct: 460 DMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLLNIFEQCKA--S 517
Query: 660 EERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKW--LK 717
+ + WC + ++ ++++ K+L K + P + P + E + L+
Sbjct: 518 KSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQL--PDF----PKETFEGSRTELLR 571
Query: 718 EIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQ 777
+ + NVA S + G V +HPS +L + W++F ++ +
Sbjct: 572 RCLCAGYFINVARRSAARTF-CTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTSKI 630
Query: 778 YL--VCVTAFDF--DSLSTLCPSPLFDVSMMERKKLHVRVIT 815
Y+ VC +++ D L L +++S + R+++ IT
Sbjct: 631 YVRTVCPVRYEWVKDLLPRLHQIDAYELSSVAREEVTEEEIT 672
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 751 (269.4 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 214/657 (32%), Positives = 333/657 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF--LADSGIAAEQSIVCTQPRKIA 222
LP++ R + L+ QILV +GETG GK+TQ+ QF L D + I CTQPR++A
Sbjct: 99 LPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQPRRVA 158
Query: 223 AISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 281
A+S+AQRV E ++ + Y F + + YMTD LL+ MND +LSR S
Sbjct: 159 AMSVAQRVAAELDVTLGEE--VGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELSRYS 216
Query: 282 CIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 341
II+DEAHER+ RR DL+++IMSAT DA + +YF D + V GR
Sbjct: 217 TIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGR 276
Query: 342 NFPVDVRYVPCATAG--TSAVASYVS-DVVRMVGEV--HTTEKEGTILAFLTSKMEVEWA 396
PV++ Y P +A+ + + G++ T +E A +E +
Sbjct: 277 THPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEM 336
Query: 397 CEKFDAPSAVALPFHGQLSFDEQFCVFKSYP------GR--RKVIFATNVAETSLTIPGV 448
+ DA +G L Q +F+ P GR RKVI +TN+AETSLTI G+
Sbjct: 337 IREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGI 396
Query: 449 KFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR 508
+V+D G K+ + P + L V +S++SA QRAGRAGRT PG+C+RLY++S F+
Sbjct: 397 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKE 456
Query: 509 PLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN 567
++Q PEI R +L VL + LGI D+ FD +D P+ + + A+ L L + ++
Sbjct: 457 LIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLD-DD 515
Query: 568 GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEK 627
G LT G+ + ++P L +++S E L + A+++ IF R S ++
Sbjct: 516 G--NLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLS-VPQIFVRPAS--QR 570
Query: 628 IKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNK-WCWENSVNAKSLRRCQDTIKEL 686
+AD +K F H +GD TLL+ Y + S +E K WC ++ ++ +SL+ + +L
Sbjct: 571 KRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQL 630
Query: 687 ETCLEKE-LAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTG 745
+E+E L +I S+ KY Y+ ++ + + VA + Y
Sbjct: 631 LRIMEREELEMISTSF---EDKKY--YEN-IRRALCAGFFMQVAKKENQGKSMYMTIKDH 684
Query: 746 QHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
Q+V LHPS + WV++ E + Y+ VTA + L + P+ +D+S
Sbjct: 685 QNVLLHPST---VLAHDAEWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPT-YYDIS 737
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 779 (279.3 bits), Expect = 1.3e-73, Sum P(2) = 1.3e-73
Identities = 235/723 (32%), Positives = 374/723 (51%)
Query: 4 LWESRLNGAHCLNLKLIPHVVVPSDADELE-ERLRNLFVDHV-KGLMEGELV-NKW---- 56
LWE L ++ + V D DE ER+ +L V H+ ++G +V K
Sbjct: 375 LWERN----RMLTSGVVTLISVNDDFDEEALERV-HLLVHHIIPPFLDGRIVFTKQPEPV 429
Query: 57 LKMKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLK 116
+ +KD D +A ++ R GS + E ER+K K E+ ++ G+
Sbjct: 430 VPVKDPTSD-MALLA-RKGSA-LVRNYREQKERRKAQKKHWELSGTKLGNIM-GVQRPQD 485
Query: 117 YLDDPQNVAKKESYDANVDVFRFEDCQR-------FDWSRIQAFIVRECKRLEDGLPIYM 169
DD + +K+ D D +F D R D+SR + + E +R LP++
Sbjct: 486 E-DDMRFDKEKDKADYRKDQ-KFADHMRDQDTGGKSDFSRKKT--ISEQRRF---LPVFA 538
Query: 170 YRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQR 229
RQ++L I +++++GETG GK+TQL Q+L + G + I CTQPR++AA+S+A+R
Sbjct: 539 SRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKR 598
Query: 230 VREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEA 288
V +E +D + Y F + + YMTD LL+ + D +L S II+DEA
Sbjct: 599 VSDEMDTQLGED--VGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEA 656
Query: 289 HERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVR 348
HERS RR DL+L++ SAT D+ + + +F + + GR FPVDV
Sbjct: 657 HERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVM 716
Query: 349 YVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD------- 401
+ + YV V+ +VH T EG +L F+ + ++E CE +
Sbjct: 717 F------SKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEID 770
Query: 402 -APSAVALPFHGQLSFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 459
AP+ LP + QL D Q +F KS G RK + ATN+AETSLT+ G+ +VIDSG K
Sbjct: 771 NAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKL 830
Query: 460 SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHR 518
+ P GM+ L++ +SQ++ANQR+GRAGRT PG+ YRLY++ ++ L PEI R
Sbjct: 831 KVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQR 890
Query: 519 VHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKF 578
+L VL + +LG+ D+ F F+D P I ++ L LGA+ + G LT G+
Sbjct: 891 TNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALD-HTGA--LTTLGRQ 947
Query: 579 LVKLGIEP-RLGKLILSCFRRRLGREGLVLAAV-MANASSIFCRV-GSDDEKIKADCLKV 635
+ + ++P + LI++C R+G VL V M + SIF R G +DE AD ++
Sbjct: 948 MAEFPLDPPQCQMLIVAC---RMGCSAEVLIIVSMLSVPSIFYRPKGREDE---ADGVRE 1001
Query: 636 QFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL-EKEL 694
+F D T L+VY++W + WC E+ ++ K++R+ ++ ++L+ + ++ L
Sbjct: 1002 KFQRPESDHLTYLNVYQQWRQ--NNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNL 1059
Query: 695 AII 697
++I
Sbjct: 1060 SVI 1062
Score = 188 (71.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 61/243 (25%), Positives = 114/243 (46%)
Query: 554 IRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMAN 613
+ +L QL + + LT G+ + + ++P ++++ R E L++ + M +
Sbjct: 923 LNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVS-MLS 981
Query: 614 ASSIFCRV-GSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
SIF R G +DE AD ++ +F D T L+VY++W + WC E+ ++
Sbjct: 982 VPSIFYRPKGREDE---ADGVREKFQRPESDHLTYLNVYQQWRQ--NNYSSTWCNEHFIH 1036
Query: 673 AKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFS 732
K++R+ ++ ++L+ + ++ +I W+ +++ I SA A
Sbjct: 1037 IKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDI---------VRKCICSAYFYQAARLK 1087
Query: 733 GYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLST 792
G + Y TG LHP+ +L G P +VV+ EL+ +Y+ C TA D L+
Sbjct: 1088 GIGE--YVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAE 1145
Query: 793 LCP 795
L P
Sbjct: 1146 LGP 1148
Score = 37 (18.1 bits), Expect = 1.3e-73, Sum P(2) = 1.3e-73
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 904 PSVALFGAGAEIKHLELERRFLTVDVYHSNANILD 938
P+ AL+G G ++ +T Y A +D
Sbjct: 1105 PTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVD 1139
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 748 (268.4 bits), Expect = 2.3e-73, P = 2.3e-73
Identities = 197/653 (30%), Positives = 332/653 (50%)
Query: 155 VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA--AEQS 212
++E ++L LP++ Y+ ++L+ I Q+L+++GETG GK+TQL Q+L + G +
Sbjct: 216 IQEARKL---LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQ 272
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVI--YMTDHCLLQH 270
I TQPR++AA S+A RV +E + + Y + +K + YMTD LL+
Sbjct: 273 IAITQPRRVAATSVAARVADEMNVVLGKE--VGYQIRFEDKTTPNKTVLKYMTDGMLLRE 330
Query: 271 FMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
F+ D LS+ SCI++DEAHER+ +R L+L+I SAT +A + S++F
Sbjct: 331 FLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFF 390
Query: 331 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTS 389
+C I +V GR +PVD+ Y A+Y+ + + ++HTT+ G IL FLT
Sbjct: 391 DNCPIFNVPGRRYPVDIHYT------LQPEANYIHAAITTIFQIHTTQSLPGDILVFLTG 444
Query: 390 KMEVEWACEKFD---------APSAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVA 439
+ E+E K + + P + L ++Q +F+ P RKV+ ATN+A
Sbjct: 445 QEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIA 504
Query: 440 ETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRL 499
ETSLTI G+++VID G VKE+ + P TGM L S++S +QRAGRAGR PG+C+R+
Sbjct: 505 ETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRI 564
Query: 500 YSK-SDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLV 558
++K S L +PEI R +L VL +L+LG+ D+ F +D PS + ++ NL
Sbjct: 565 FTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLY 624
Query: 559 QLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL--G--REGLVLAAVMANA 614
LGA+ + G +T GK + + EP K++ + G E L + +++
Sbjct: 625 ILGALN-SKGT--ITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHET 681
Query: 615 SSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAK 674
S+F +G K D D L ++ +W + + R+ WC ++ + K
Sbjct: 682 PSLF--IGQ-----KRDAAASVLSEVESDHILYLEIFNQWRN-SKFSRS-WCQDHKIQFK 732
Query: 675 SLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEY-DKWLKEIILSALAENVAMF-- 731
++ R ++ +L C EK + Y + + +S N+
Sbjct: 733 TMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGP 792
Query: 732 SGYDQLGYEVAMTGQHVQLHPSCSLLIF----GQKPT-WVVFGELLSVNNQYL 779
+GY +G G +V +HP+ L + Q+P+ +V++ +L+ + +++
Sbjct: 793 TGYQTMGRSSG--GLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFI 843
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 746 (267.7 bits), Expect = 3.8e-73, P = 3.8e-73
Identities = 204/621 (32%), Positives = 324/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 309 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 363
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 364 EACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 423
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 484 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 544 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 598
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 599 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 655
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 656 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 706
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 707 TGHYLTVKDNQVVQLHPSTVL 727
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 746 (267.7 bits), Expect = 3.8e-73, P = 3.8e-73
Identities = 204/621 (32%), Positives = 324/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 309 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 363
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 364 EACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 423
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 484 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 544 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 598
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 599 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 655
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 656 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 706
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 707 TGHYLTVKDNQVVQLHPSTVL 727
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 746 (267.7 bits), Expect = 3.8e-73, P = 3.8e-73
Identities = 204/621 (32%), Positives = 324/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 309 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 363
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 364 EACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 423
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 484 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 544 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 598
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 599 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 655
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 656 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 706
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 707 TGHYLTVKDNQVVQLHPSTVL 727
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 746 (267.7 bits), Expect = 3.8e-73, P = 3.8e-73
Identities = 204/621 (32%), Positives = 324/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 309 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 363
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 364 EACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 423
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 484 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 544 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 598
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 599 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 655
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 656 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 706
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 707 TGHYLTVKDNQVVQLHPSTVL 727
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 746 (267.7 bits), Expect = 3.8e-73, P = 3.8e-73
Identities = 204/621 (32%), Positives = 324/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 309 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 363
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 364 EACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 423
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 484 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 544 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 598
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 599 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 655
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 656 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 706
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 707 TGHYLTVKDNQVVQLHPSTVL 727
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 746 (267.7 bits), Expect = 3.8e-73, P = 3.8e-73
Identities = 204/621 (32%), Positives = 324/621 (52%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---SGIAAEQSIVC 215
KRL+ LP++ Y+ + Q VL+GETG GK+TQ+ Q+ + S ++ + C
Sbjct: 133 KRLQ--LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVAC 190
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMND 274
TQPR++AA+S+AQRV +E + + Y F + + YMTD LL+ MND
Sbjct: 191 TQPRRVAAMSVAQRVADEMDVMLGQE--VGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L R II+DEAHER+ +R DL++++MSAT DA + YF +C
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ + GR PV++ Y P + + + V+++ E+EG +L FLT + E++
Sbjct: 309 LLTIPGRTHPVEIFYTP--EPERDYLEAAIRTVIQIH---MCEEEEGDLLLFLTGQEEID 363
Query: 395 WACEKF-----DAPSAVA----LPFHGQLSFDEQFCVFKSYPGR-------RKVIFATNV 438
AC++ D V +P + L +Q +F+ P + RKV+ +TN+
Sbjct: 364 EACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNI 423
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETSLTI GV FVID G K+ + P + L V +S++SA QRAGRAGRT PG+C+R
Sbjct: 424 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFR 483
Query: 499 LYSKSDFETRPL-NQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNL 557
LY++ ++T N PEI R +LG VL++ LGI D+ FDF+D P+ + + A+ L
Sbjct: 484 LYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 543
Query: 558 VQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSI 617
L A+ ++G +LTE G + + ++P+L K++++ E L + A+++
Sbjct: 544 NYLAALN-DDG--DLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQ-- 598
Query: 618 FCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLR 677
C V + K AD K++F H +GD TLL+VY + E +WC++N +N +SL
Sbjct: 599 -CFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ--NHESVQWCYDNFINYRSLM 655
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY-DQ 736
+ ++L +++ +P +T D ++ I AL M + ++
Sbjct: 656 SADNVRQQLSRIMDR---FNLPR----RSTDFTSRDYYIN--IRKALVTGYFMQVAHLER 706
Query: 737 LG-YEVAMTGQHVQLHPSCSL 756
G Y Q VQLHPS L
Sbjct: 707 TGHYLTVKDNQVVQLHPSTVL 727
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 442 (160.7 bits), Expect = 5.1e-73, Sum P(2) = 5.1e-73
Identities = 128/416 (30%), Positives = 220/416 (52%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
L +G + D+Q +F+ P G RK + ATN+A TSLTI G+++++DSG VK+
Sbjct: 281 LSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRV 340
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET-RPLNQEPEIHRVHLGIAV 525
G+++L V +S+S A QRAGRAGRT G+C+R+YSK ++T P PEI R L +
Sbjct: 341 GLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVI 400
Query: 526 LRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIE 585
L + LG+ DV F ++D P + I A++ L Q AI G E+T+ G+ +V+ +
Sbjct: 401 LTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAID-RRG--EVTKLGRLMVEFPLP 457
Query: 586 PRLGKLILSCFRRRLGREGLVL-AAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-- 642
P L + +L LG E ++L A M + +IF R G +++ +A+ + +G
Sbjct: 458 PNLTRALLKA--AALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGS 515
Query: 643 -DLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSY 701
D LL V+ + + E + WC EN ++ ++++ + +ET L +E+ + +
Sbjct: 516 NDFLMLLCVFEKCRA--SENPSAWCKENWIHWRAVK----SAFSVETQL-REILLRLKQQ 568
Query: 702 WLWNPHKYTEYDK--WLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIF 759
+ PH+ E + L++ + NVA S + + G V +HPS L F
Sbjct: 569 KDF-PHERFEGSRSELLRQCLCLGYFTNVARRS-IGKSFCTMDGHGSSVLIHPSSCL--F 624
Query: 760 GQKPT--WVVFGELLSVNNQYL--VCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
GQ+ W++F ++L + Y+ VC +D+ D L L ++++S + R+++
Sbjct: 625 GQELQLDWIIFHDVLVTSRVYVRTVCPIRYDWVKDLLPKLHEIDVYELSSVAREEV 680
Score = 378 (138.1 bits), Expect = 5.1e-73, Sum P(2) = 5.1e-73
Identities = 87/242 (35%), Positives = 135/242 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPIY Y+ +++ + L++ GETG GK+TQL Q+L +G++ I TQPR++AAI
Sbjct: 18 LPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIGVTQPRRVAAI 77
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
++AQRV E + ++ + Y F D+ + YMTD CLL+ + D L++ S +
Sbjct: 78 TVAQRVSSEMQVRLGEE--VGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQYSIV 135
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCR-----RFDLRLVIMSATADAHQLSKYFYDCGISHV 338
I+DEAHERS + + L++V+MSAT + +LS ++ +C + +
Sbjct: 136 ILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTI 195
Query: 339 VGRNFPVDVRYVPCATAGTSAVAS--YVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWA 396
GR +PV + C G S YV +VV+M +VHT E G IL FLT + E+E A
Sbjct: 196 PGRTYPVKETF--CNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKA 253
Query: 397 CE 398
C+
Sbjct: 254 CD 255
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 741 (265.9 bits), Expect = 1.3e-72, P = 1.3e-72
Identities = 185/530 (34%), Positives = 289/530 (54%)
Query: 186 LIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVIC 245
L GETG GK+TQL Q+L + GI + I TQPR++AAISLA RV +E R E ++
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRT--ELGKLVG 61
Query: 246 YP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXX 304
Y F D+++ ++TD LL+ ++D L + SCII+DEAHER+
Sbjct: 62 YTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKA 121
Query: 305 XXCRRFDLR-----LVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSA 359
RR +LR +++MSAT D S+YF + ++ GR P+ V Y
Sbjct: 122 AQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTK------QP 175
Query: 360 VASYVSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEWA---CEKF-----DA-PSAVALP 409
Y+ + V ++H IL FLT + E+E C D PS + LP
Sbjct: 176 QQDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLP 235
Query: 410 FHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGM 468
+ L + +Q VF+ P G RKVI ATN+AETS+TI G+K+V+D+GMVK + P +G+
Sbjct: 236 LYASLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGL 295
Query: 469 NVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRI 528
VL V RVS++ A QRAGRAGR + G CYRLY++++FE PEI R +L +L++
Sbjct: 296 EVLAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQL 355
Query: 529 LALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRL 588
LA+ + +V FDF+ PS ++ A+ L LGA++ + LT G+ + +EP+
Sbjct: 356 LAMKVPNVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKF 415
Query: 589 GKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLL 648
K IL + E L + ++++ S+ S ++++A ++ +F GD TLL
Sbjct: 416 AKTILLSPKFHCTEEILTIVSLLS-VDSVLYNPPSRRDEVQA--MRKKFLSSEGDHITLL 472
Query: 649 SVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLEKELAII 697
++YR + SL ++ WC EN VN++++ + +L + CL+ + ++
Sbjct: 473 NIYRTFKSLGGDK--DWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMV 520
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 767 (275.1 bits), Expect = 2.6e-72, Sum P(2) = 2.6e-72
Identities = 214/666 (32%), Positives = 339/666 (50%)
Query: 124 VAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLE----DGLPIYMYRQDILRRIY 179
V K ++ DA +F+ E + D + + ++RE R E D LP+ +QDIL I
Sbjct: 34 VKKVKNPDAQQAIFQ-EMAKEIDQAAGKV-LLREAARPEITYPDNLPVSQKKQDILEAIR 91
Query: 180 GEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYE 239
Q++++ GETG GK+TQL + + G + I TQPR++AA ++A R+ EE + E
Sbjct: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKT--E 149
Query: 240 DDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXX 298
I Y FS ++ V MTD LL DR L + II+DEAHERS
Sbjct: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209
Query: 299 XXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTS 358
RR DL+++I SAT D + S++F + I V GR +PV+VRY P
Sbjct: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269
Query: 359 AVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW---ACEKFDAPSAVALPFHGQLS 415
+ + V E+ + E G IL F++ + E+ A K + LP + +LS
Sbjct: 270 TERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328
Query: 416 FDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCR 475
EQ VF+S+ GRR ++ ATNVAETSLT+PG+K+VID G + S + T + L +
Sbjct: 329 NSEQNRVFQSHSGRR-IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP 387
Query: 476 VSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRD 535
+SQ+SANQR GR GR G C RLYS+ DF +RP +PEI R +L +L++ ALG+ D
Sbjct: 388 ISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGD 447
Query: 536 VQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNN--GVFELTEEGKFLVKLGIEPRLGKLIL 593
+ F F++AP + I+ +R L +LGAI + ++LT G+ L +L ++PRL +++L
Sbjct: 448 IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL 507
Query: 594 SCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYR- 652
+ RE +++ + ++ R D++ +D +F + D ++++
Sbjct: 508 EAQKHGCVREAMIITSALSIQDP---RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY 564
Query: 653 ---EWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKY 709
+ +L + C + +N +R QD +L + KEL I + S P +Y
Sbjct: 565 LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-KELGIPVNS----EPAEY 619
Query: 710 TEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFG 769
E + +L+ L ++ M D+ Y A + + P L F + P WV+
Sbjct: 620 RE----IHIALLTGLLSHIGMKDA-DKQEYTGARNARF-SIFPGSGL--FKKPPKWVMVA 671
Query: 770 ELLSVN 775
EL+ +
Sbjct: 672 ELVETS 677
Score = 41 (19.5 bits), Expect = 2.6e-72, Sum P(2) = 2.6e-72
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 936 ILDDKELLMFLEKNASGSICSIHKFAVGQDSDEKDKWGRVTFLTPD 981
++DD+ L F ++ S + S F DS W +V+ TPD
Sbjct: 789 LVDDETLFEFYDQRISHDVISARHF----DS----WWKKVSRETPD 826
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 754 (270.5 bits), Expect = 6.4e-72, P = 6.4e-72
Identities = 195/549 (35%), Positives = 299/549 (54%)
Query: 146 DWSRIQAFI-VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD 204
D+++ Q+F + + +R + LPI+ YR I+ + ++V+ G+TGCGKSTQ+ Q+L
Sbjct: 142 DFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLA 201
Query: 205 SGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMT 263
SGI +I CTQPR+IA ISLA+RV ES Y S + Y F +++ +K++++T
Sbjct: 202 SGI---NNIACTQPRRIACISLAKRVSFESLNQY--GSKVGYQIRFETSRTLATKLLFLT 256
Query: 264 DHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADA 323
+ LL+ D L + +IVDE HER R DLRLV+MSAT +
Sbjct: 257 EGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINI 316
Query: 324 HQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD-----VVRMVGEVHTTE 378
S YF D + V GR FP+ V Y P + + + V++ + + + E
Sbjct: 317 KLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQE 376
Query: 379 KEGTILAFLTSKMEV---EWACEKFDAPSA--VALPFHGQLSFDEQFCVFK-SYPGRRKV 432
+ G +L FL+ E+ + AC+ + + + LP H LS +Q VF + PG RK
Sbjct: 377 ERGDLLLFLSGVAEISTIQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKC 436
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
I +TN+AETS+TI GV+FV+DSG VKE F+P M L+ +S++S+ QR GRAGRT
Sbjct: 437 IISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTG 496
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEM 552
PG CYRLYS+SD++ PEIHRV L +L++ ++G+ D + F FID P A +I+
Sbjct: 497 PGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQT 556
Query: 553 AIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
A+ L + GA+ +G ELT G+ L +L ++ +GK+++ L L +AA ++
Sbjct: 557 AVTYLREQGALD-EHG--ELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALS 613
Query: 613 NASSIFCRVGSDDEKIKADCLKV-QFCHRN-GDLFTLLSVYREWDSLPREERN---KWCW 667
S F R + DC Q + N GD FTL++ + W + + + KWC
Sbjct: 614 -VQSPFLRSAQHNP----DCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCR 668
Query: 668 ENSVNAKSL 676
+ + L
Sbjct: 669 RRGLEEQRL 677
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 445 (161.7 bits), Expect = 8.3e-72, Sum P(2) = 8.3e-72
Identities = 104/279 (37%), Positives = 167/279 (59%)
Query: 409 PFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGM 468
P + QLS ++Q +FK Y RK+I +TN+AETSLT+ G+K+VID+G K + GM
Sbjct: 776 PIYSQLSSEQQSKIFKKYD-LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGM 834
Query: 469 NVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-NQEPEIHRVHLGIAVLR 527
+VL+V +SQ++ANQR+GRAGRT G CYRLY+++ F N PEI R +L VL
Sbjct: 835 DVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLL 894
Query: 528 ILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
+ +L ++++ FDFID PS ++I ++ L LGAI N G LT+ G+ +V+ ++P
Sbjct: 895 LKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAIN-NEG--NLTDIGRKMVQFPLDPP 951
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
L K+++ + +E L++ + M ++ SIF ++E I++ K +F D TL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVS-MLSSPSIFLESKENNESIESK--KEKFTVPESDHLTL 1008
Query: 648 LSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
L++Y +W S WC +N + K+L + ++ +L
Sbjct: 1009 LNIYLQWRS--HNYSYSWCTKNFIQYKALNKAKEVYSQL 1045
Score = 375 (137.1 bits), Expect = 8.3e-72, Sum P(2) = 8.3e-72
Identities = 85/249 (34%), Positives = 137/249 (55%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCT 216
E +L++ LPIY + ++L +Y I++++GETG GK+TQ+VQ+L + G I CT
Sbjct: 471 ELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCT 530
Query: 217 QPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
QPR++AA+S+A RV E + S++ Y F D+K+ Y+TD LL+ +ND+
Sbjct: 531 QPRRVAAVSVAYRVSYEMN--VDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDK 588
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
+L + S II+DEAHERS +R DL+L++ SAT DA + S +F + I
Sbjct: 589 ELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPI 648
Query: 336 SHVVGRNFPVDVRYV--PCATAGTSAVASYVSDVVRMVGEVHTTEKE-----GTILAFLT 388
++ GR F V + Y+ PC Y+ V+ ++H ++ G IL F+T
Sbjct: 649 YNIQGRTFKVHIEYLRTPCN--------DYIECAVQKAIQIHVSDNNYDNNFGDILIFMT 700
Query: 389 SKMEVEWAC 397
+ ++ C
Sbjct: 701 GQEDINATC 709
Score = 192 (72.6 bits), Expect = 6.5e-45, Sum P(2) = 6.5e-45
Identities = 70/275 (25%), Positives = 122/275 (44%)
Query: 528 ILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
+L L VQ D + E I +L +L + N LT+ G+ +V+ ++P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
L K+++ + +E L++ + M ++ SIF ++E I++ K +F D TL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVS-MLSSPSIFLESKENNESIESK--KEKFTVPESDHLTL 1008
Query: 648 LSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPH 707
L++Y +W S WC +N + K+L + ++ +L + K L I
Sbjct: 1009 LNIYLQWRS--HNYSYSWCTKNFIQYKALNKAKEVYSQLIDII-KTLNI----------- 1054
Query: 708 KYTEYD-KW--LKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPT 764
K D KW +++ I S N A + + Y T +HP+ SL G P
Sbjct: 1055 KNVSCDNKWELIRKTICSGYFHNAAKLKSFSE--YINLRTNVSCHVHPNSSLYNIGYTPD 1112
Query: 765 WVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLF 799
+V++ E++ +Y+ VT D + L L PLF
Sbjct: 1113 YVIYQEIVFTTKEYMRNVTTVDPEWLCEL--GPLF 1145
Score = 39 (18.8 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 123 NVAKKESYDANVDV-------FRFED 141
+VA + SY+ NVD+ RFED
Sbjct: 539 SVAYRVSYEMNVDIGSLVGYTIRFED 564
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 445 (161.7 bits), Expect = 8.3e-72, Sum P(2) = 8.3e-72
Identities = 104/279 (37%), Positives = 167/279 (59%)
Query: 409 PFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGM 468
P + QLS ++Q +FK Y RK+I +TN+AETSLT+ G+K+VID+G K + GM
Sbjct: 776 PIYSQLSSEQQSKIFKKYD-LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGM 834
Query: 469 NVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPL-NQEPEIHRVHLGIAVLR 527
+VL+V +SQ++ANQR+GRAGRT G CYRLY+++ F N PEI R +L VL
Sbjct: 835 DVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLL 894
Query: 528 ILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
+ +L ++++ FDFID PS ++I ++ L LGAI N G LT+ G+ +V+ ++P
Sbjct: 895 LKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAIN-NEG--NLTDIGRKMVQFPLDPP 951
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
L K+++ + +E L++ + M ++ SIF ++E I++ K +F D TL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVS-MLSSPSIFLESKENNESIESK--KEKFTVPESDHLTL 1008
Query: 648 LSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
L++Y +W S WC +N + K+L + ++ +L
Sbjct: 1009 LNIYLQWRS--HNYSYSWCTKNFIQYKALNKAKEVYSQL 1045
Score = 375 (137.1 bits), Expect = 8.3e-72, Sum P(2) = 8.3e-72
Identities = 85/249 (34%), Positives = 137/249 (55%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCT 216
E +L++ LPIY + ++L +Y I++++GETG GK+TQ+VQ+L + G I CT
Sbjct: 471 ELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCT 530
Query: 217 QPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
QPR++AA+S+A RV E + S++ Y F D+K+ Y+TD LL+ +ND+
Sbjct: 531 QPRRVAAVSVAYRVSYEMN--VDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDK 588
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
+L + S II+DEAHERS +R DL+L++ SAT DA + S +F + I
Sbjct: 589 ELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPI 648
Query: 336 SHVVGRNFPVDVRYV--PCATAGTSAVASYVSDVVRMVGEVHTTEKE-----GTILAFLT 388
++ GR F V + Y+ PC Y+ V+ ++H ++ G IL F+T
Sbjct: 649 YNIQGRTFKVHIEYLRTPCN--------DYIECAVQKAIQIHVSDNNYDNNFGDILIFMT 700
Query: 389 SKMEVEWAC 397
+ ++ C
Sbjct: 701 GQEDINATC 709
Score = 192 (72.6 bits), Expect = 6.5e-45, Sum P(2) = 6.5e-45
Identities = 70/275 (25%), Positives = 122/275 (44%)
Query: 528 ILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
+L L VQ D + E I +L +L + N LT+ G+ +V+ ++P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
L K+++ + +E L++ + M ++ SIF ++E I++ K +F D TL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVS-MLSSPSIFLESKENNESIESK--KEKFTVPESDHLTL 1008
Query: 648 LSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPH 707
L++Y +W S WC +N + K+L + ++ +L + K L I
Sbjct: 1009 LNIYLQWRS--HNYSYSWCTKNFIQYKALNKAKEVYSQLIDII-KTLNI----------- 1054
Query: 708 KYTEYD-KW--LKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPT 764
K D KW +++ I S N A + + Y T +HP+ SL G P
Sbjct: 1055 KNVSCDNKWELIRKTICSGYFHNAAKLKSFSE--YINLRTNVSCHVHPNSSLYNIGYTPD 1112
Query: 765 WVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLF 799
+V++ E++ +Y+ VT D + L L PLF
Sbjct: 1113 YVIYQEIVFTTKEYMRNVTTVDPEWLCEL--GPLF 1145
Score = 39 (18.8 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 123 NVAKKESYDANVDV-------FRFED 141
+VA + SY+ NVD+ RFED
Sbjct: 539 SVAYRVSYEMNVDIGSLVGYTIRFED 564
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 759 (272.2 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 209/640 (32%), Positives = 332/640 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP+ R DI + I Q++++ GETG GK+TQL + A+ G I TQPR++AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFD-SKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A R+ EE E + Y + Q D +++ MTD LL NDR L++ I
Sbjct: 147 SVANRIAEEMET--ELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTI 204
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
I+DEAHERS RR DL+++I SAT D + SK+F + I V GR +
Sbjct: 205 IIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTY 264
Query: 344 PVDVRYVPCATAGTS-AVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW---ACEK 399
PV+VRY P A S + + + + V E+ E G IL F+ + E+ A K
Sbjct: 265 PVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSK 323
Query: 400 FDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 459
+ +P + +LS EQ +F+ + GRR ++ ATNVAETSLT+PG+K+VID G +
Sbjct: 324 RNLRDTEIVPLYARLSAGEQNKIFQPHAGRR-IVLATNVAETSLTVPGIKYVIDPGTARI 382
Query: 460 SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRV 519
S + T + L + +SQ+SANQR GR GRTE G C RLYS+ DF +RP +PEI R
Sbjct: 383 SRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRT 442
Query: 520 HLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAI--KLNNGVFELTEEGK 577
+L +L++ ALG+ D++ F F++AP + I+ +R L +LGAI ++ + LTE GK
Sbjct: 443 NLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGK 502
Query: 578 FLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQF 637
L +L I+PRL +++L + +E +++A+ ++ R D++ AD +F
Sbjct: 503 QLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDP---RERPSDKQQSADDKHRRF 559
Query: 638 CHRNGDLFTLLSVY----REWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
H + D TL++++ ++ +L + + C + +N +R QD +L +E
Sbjct: 560 NHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQST-RE 618
Query: 694 LAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPS 753
+ + P Y + IL L ++ M ++ Y A + + P+
Sbjct: 619 MGFKLND----EPGSYHA----VHSAILVGLLSHIGM-KDQEKNEYHGARNARF-NIFPA 668
Query: 754 CSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
L F ++P WV+ EL+ + + V + D + L
Sbjct: 669 SGL--FKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPL 706
Score = 47 (21.6 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 1091 LRK--VTTRRIRDLFLVRGDAVECPQFDAFEEALLR 1124
LRK V D FL R E P DA E+ L R
Sbjct: 925 LRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR 960
Score = 39 (18.8 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 24/98 (24%), Positives = 41/98 (41%)
Query: 879 VLEYEKKWLHN-ECIEKCLYQGAGVSPSVA--LFGAGA------EIKHLELER-RFLTVD 928
V+ YEK L+ + K L + P ++ +F A E KH ++ R L +
Sbjct: 727 VMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAE 786
Query: 929 VY---HSNAN---ILDDKELLMFLEKNASGSICSIHKF 960
V H + ++DD+EL F ++ + S F
Sbjct: 787 VEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHF 824
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 759 (272.2 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 209/640 (32%), Positives = 332/640 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP+ R DI + I Q++++ GETG GK+TQL + A+ G I TQPR++AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFD-SKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A R+ EE E + Y + Q D +++ MTD LL NDR L++ I
Sbjct: 147 SVANRIAEEMET--ELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTI 204
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
I+DEAHERS RR DL+++I SAT D + SK+F + I V GR +
Sbjct: 205 IIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTY 264
Query: 344 PVDVRYVPCATAGTS-AVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW---ACEK 399
PV+VRY P A S + + + + V E+ E G IL F+ + E+ A K
Sbjct: 265 PVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSK 323
Query: 400 FDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 459
+ +P + +LS EQ +F+ + GRR ++ ATNVAETSLT+PG+K+VID G +
Sbjct: 324 RNLRDTEIVPLYARLSAGEQNKIFQPHAGRR-IVLATNVAETSLTVPGIKYVIDPGTARI 382
Query: 460 SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRV 519
S + T + L + +SQ+SANQR GR GRTE G C RLYS+ DF +RP +PEI R
Sbjct: 383 SRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRT 442
Query: 520 HLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAI--KLNNGVFELTEEGK 577
+L +L++ ALG+ D++ F F++AP + I+ +R L +LGAI ++ + LTE GK
Sbjct: 443 NLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGK 502
Query: 578 FLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQF 637
L +L I+PRL +++L + +E +++A+ ++ R D++ AD +F
Sbjct: 503 QLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDP---RERPSDKQQSADDKHRRF 559
Query: 638 CHRNGDLFTLLSVY----REWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKE 693
H + D TL++++ ++ +L + + C + +N +R QD +L +E
Sbjct: 560 NHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQST-RE 618
Query: 694 LAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPS 753
+ + P Y + IL L ++ M ++ Y A + + P+
Sbjct: 619 MGFKLND----EPGSYHA----VHSAILVGLLSHIGM-KDQEKNEYHGARNARF-NIFPA 668
Query: 754 CSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
L F ++P WV+ EL+ + + V + D + L
Sbjct: 669 SGL--FKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPL 706
Score = 47 (21.6 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 1091 LRK--VTTRRIRDLFLVRGDAVECPQFDAFEEALLR 1124
LRK V D FL R E P DA E+ L R
Sbjct: 925 LRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR 960
Score = 39 (18.8 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 24/98 (24%), Positives = 41/98 (41%)
Query: 879 VLEYEKKWLHN-ECIEKCLYQGAGVSPSVA--LFGAGA------EIKHLELER-RFLTVD 928
V+ YEK L+ + K L + P ++ +F A E KH ++ R L +
Sbjct: 727 VMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAE 786
Query: 929 VY---HSNAN---ILDDKELLMFLEKNASGSICSIHKF 960
V H + ++DD+EL F ++ + S F
Sbjct: 787 VEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHF 824
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 729 (261.7 bits), Expect = 2.7e-71, P = 2.7e-71
Identities = 203/676 (30%), Positives = 352/676 (52%)
Query: 151 QAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA- 209
Q F + + +R LP++ +RQ+ L + QI+V +GETG GK+TQ+ Q++ +
Sbjct: 96 QYFKILKTRR---NLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHL 152
Query: 210 -EQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVI-YMTDHCL 267
++ + CTQPR++AA+S+AQRV +E E + Y + S ++ YMTD L
Sbjct: 153 NKKMVACTQPRRVAAMSVAQRVADELD--VELGQEVGYSIRFENKTTPSTILKYMTDGQL 210
Query: 268 LQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLS 327
L+ ++D +++R SCII+DEAHER+ RR DL+++IMSAT DA +
Sbjct: 211 LRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQ 270
Query: 328 KYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRM-----VGEV--HTTEKE 380
+YF++ I V GR PV++ Y A A + + V V+++ G++ T +E
Sbjct: 271 RYFFEAPILAVPGRTHPVEIFYT--AEAERDYIEASVRTVLQIHATEAEGDILLFLTGEE 328
Query: 381 GTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFKSYP------GR--RKV 432
++EV+ D P +G L +Q +F + P GR RK
Sbjct: 329 EIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKC 388
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
I ATN+AETSLTI G+ +V+D G K+ + + L V +S++SA QRAGRAGRT
Sbjct: 389 IVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTR 448
Query: 493 PGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIE 551
PG+C+RLY+++ F+ + Q PEI R +L +L + LG+ D+ FDF+D P+ + +
Sbjct: 449 PGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMM 508
Query: 552 MAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVM 611
A+ L L + ++G +LT+ G + ++P L +++S E L + +++
Sbjct: 509 RALEELNYLSCLN-DDG--DLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLL 565
Query: 612 ANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE--ERNKWCWEN 669
+ +F R ++ ++ AD +K F H GD TLL+ Y + S + + KWC E+
Sbjct: 566 S-VPQVFMRPANNRKR--ADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEH 622
Query: 670 SVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVA 729
++ + L + +L+ +E++ ++ + + + + YT ++ +++ VA
Sbjct: 623 FLSYRHLSSADNVRAQLKGIMERQDLELVSTPFT-DKNYYTN----IRRCLVAGFFMQVA 677
Query: 730 MFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDS 789
+ ++ Y Q+V LHPS S+L + WV++ E + + QY+ VT +
Sbjct: 678 LRETSGKV-YHTIKDNQNVMLHPS-SVLTTDYE--WVLYHEFVLTSKQYIRTVTGIRPEW 733
Query: 790 LSTLCPSPLFDVSMME 805
L + P+ +D+ E
Sbjct: 734 LIDIAPN-YYDLDNFE 748
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 727 (261.0 bits), Expect = 4.4e-71, P = 4.4e-71
Identities = 202/646 (31%), Positives = 326/646 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI + + I+ + ++V+IGETG GKSTQL Q L G I TQPR++AA+
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+A+RV +E +D + Y F +++ Y+TD LL+ +++ L S I
Sbjct: 64 SVARRVAQELDVPLGED--VGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVI 121
Query: 284 IVDEAHERSXXXXXXXXXXXXXX-CRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I+DEAHERS R + +++I SAT D ++S++F C + +V G+
Sbjct: 122 ILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKL 181
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDA 402
+PV++ Y SY+ +++ ++H E EG IL F+T + ++E + +
Sbjct: 182 YPVEILY------SKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEE 235
Query: 403 P----------SAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTIPGVKFV 451
A+ P HG L + Q VF P R+ I +TN+AETSLT+ GV +V
Sbjct: 236 KVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYV 295
Query: 452 IDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLN 511
IDSG VK+ + P +GM L V ++S+ ANQRAGRAGRT PG+CYRLY + + L+
Sbjct: 296 IDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLD 355
Query: 512 QE-PEIHRVHLGIAVLRILALGIRDVQ--GFDFIDAPSAKAIEMAIRNLVQLGAIKLNNG 568
PEI R L +VL + +L + D+ FDF+DAPS++++E A++ L + AI NG
Sbjct: 356 ATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAID-ENG 414
Query: 569 VFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIF-CRVGSDDEK 627
+T G+ + L +EP L + ++ + L + A+++ +++ R ++K
Sbjct: 415 A--ITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKK 472
Query: 628 IKAD-CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K D + GD LL ++ WD + WC EN + + + +D ++L
Sbjct: 473 RKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDP--VWCKENGMQVRGMVFVKDVRRQL 530
Query: 687 ETCLEK----ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVA 742
++K L + + Y + K L + +AE + +GY L ++
Sbjct: 531 CQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQ-- 588
Query: 743 MTGQHVQLHPSCSLLIF--GQKPTWVVFGELLSVNNQYLVCVTAFD 786
Q VQ+HPS L G P +VV+ EL+S ++ V A D
Sbjct: 589 --SQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVD 632
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 746 (267.7 bits), Expect = 1.1e-70, P = 1.1e-70
Identities = 199/624 (31%), Positives = 324/624 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP+ R +I I Q++++ GETG GK+TQL + ++G + I TQPR+IAA
Sbjct: 74 LPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPRRIAAR 133
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
S+A R+ +E + ++V F DS + MTD LL DR L + +I
Sbjct: 134 SVAARIADELKRPL-GETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQYDTLI 192
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
VDEAHERS RR DL+LVI SAT D + S++F + I V GR +P
Sbjct: 193 VDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYP 252
Query: 345 VDVRYVPCATAGTSAVASYVSD---VVRMVGEVHTTEKEGTILAFLTSKMEVEWACE--- 398
V++RY P +A + + + ++ V E+H E G IL FL+ + E+ E
Sbjct: 253 VEIRYRPPDSAEEESDETERGEQQAILDAVDELHR-ENTGDILIFLSGEREIRDTAESLR 311
Query: 399 KFDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVK 458
K LP + +L+ EQ +FK + GRR+++ ATNVAETSLT+PG++ VID+G +
Sbjct: 312 KHHPADCEVLPLYSRLTVSEQEKIFKPH-GRRRIVLATNVAETSLTVPGIRGVIDAGYAR 370
Query: 459 ESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHR 518
S + + + L + ++S++SANQRAGR GR PG C RLYS+ DF RP +PEI R
Sbjct: 371 ISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLNRPEFTDPEILR 430
Query: 519 VHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKF 578
+L +L++ AL + D++ F F++ P + + +R L ++ A+ LTE G+
Sbjct: 431 TNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQG---RLTELGRR 487
Query: 579 LVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFC 638
L +L ++PRLG+++L+ E ++ A ++ R D+ AD +F
Sbjct: 488 LARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDP---RERPADKAQAADQKHARFR 544
Query: 639 HRNGDLFTLLSVYREWDS----LPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKEL 694
H + D +L+++ +++ L + ++C +N ++A +R +D +++ ++ EL
Sbjct: 545 HPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVVKGEL 604
Query: 695 AIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSC 754
+ P+ P Y E + +L+ L +V DQ Y V + GQ Q+ P
Sbjct: 605 GLR-PNQV---PADYGE----IHRALLTGLLCHVGFRQ--DQNEY-VGVRGQKFQIFPGS 653
Query: 755 SLLIFGQKPTWVVFGELLSVNNQY 778
L F +P W++ E + + Y
Sbjct: 654 FL--FKTRPVWIISAEQVETSRVY 675
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 719 (258.2 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 206/631 (32%), Positives = 312/631 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAE-QSIVCTQPRKIAA 223
LPI+ R IL + ++++GETGCGKSTQ+ QFL ++G AA+ + IV TQPR++A
Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
++LA RV EE + C V F D+KV +MTD LL+ + D LS+ S I
Sbjct: 137 VTLATRVAEE-KDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSII 195
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD----------- 332
++DEAHERS R DLR+++ SAT DA +L K F++
Sbjct: 196 MIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDA-ELFKDFFEMNETGNSDKDT 254
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
GI V GR PV V + ++V Y V V +H E G IL FLT + E
Sbjct: 255 AGIISVEGRTHPVAVHHTK------TSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDE 308
Query: 393 VEWACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSL 443
VE CEK + +P +G L EQ F S P G RKV+ ATN+AE S+
Sbjct: 309 VEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASI 368
Query: 444 TIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKS 503
TIPG+ +VID+G VK G+ L VS++SA QRAGRAGR PG+CYRLY +S
Sbjct: 369 TIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPES 428
Query: 504 DFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAI 563
+FE PEI R + +L++ ALG+++V F ++ P + A+ + L LGAI
Sbjct: 429 EFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAI 488
Query: 564 KLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVG 622
+ +LT G + + + P K +L E + + A+M +F +
Sbjct: 489 DETS---QLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMM-QIQDVF--IT 542
Query: 623 SDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDT 682
++ +AD ++ +F GD T+L+V+ ++ R + KWC ++ VN + L R +
Sbjct: 543 PYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSK--KWCSDHFVNYRGLMRADNV 600
Query: 683 IKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLG-YEV 741
+L L++ + S L N + +++ +++ A Y G Y
Sbjct: 601 RSQLVRLLKRFEIEKVSSRGLINCSEN------IRQCLVTGFFSQAAQ---YHYTGKYMT 651
Query: 742 AMTGQHVQLHPSCSLLIFGQKPTWVVFGELL 772
++ S++ P WV+F E++
Sbjct: 652 VKESFPFNMYKGSSIMFKKDYPKWVIFTEVM 682
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 717 (257.5 bits), Expect = 5.4e-70, P = 5.4e-70
Identities = 213/641 (33%), Positives = 324/641 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI YR IL + Q+++L+GETG GKSTQ+ Q+L + G + I T+PR+++ +
Sbjct: 47 LPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTV 106
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
+LA RV +E RG D+V F + +K+ +MT+ LL+ + D L++ II
Sbjct: 107 TLANRVAQE-RGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVII 165
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
VDEAHER+ +R L+L+I SAT DA S++F G S V
Sbjct: 166 VDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPG-SGEVSVKLS 224
Query: 345 VDVRYVPCATAGTSA-VASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE---KF 400
++ R P + + A YV + V V ++H E G ILAFLT + EV A + ++
Sbjct: 225 IEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREY 284
Query: 401 DAPSAV----ALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSG 455
A S LP +G +S +Q VF + P G RKV+ ATN+AETS+TIPG+ +VID G
Sbjct: 285 IASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCG 344
Query: 456 MVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPE 515
VK ++ P T + L + VS++SA QRAGRAGR PG+ YRLY+KSD+E Q PE
Sbjct: 345 YVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPE 404
Query: 516 IHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEE 575
+ R L A+L++ ALGI ++ FDF P A+ + A+ +L L AI G LT+
Sbjct: 405 MRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAID-EQG--NLTKP 461
Query: 576 -GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLK 634
G L +L L K++ + E + + A++ SIF R S +
Sbjct: 462 VGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALL-QVQSIFSRPASAVAQQSGRIAH 520
Query: 635 VQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKEL 694
+F GD T+L+ Y + + ++C + + ++L+R ++L T K+
Sbjct: 521 RKFEVAEGDFITMLNAYTGF--VEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKY 578
Query: 695 AIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSC 754
I I S + +K K I + VA + Y +G + +HP+
Sbjct: 579 GIPIFSC-------KGDVEKLCK-CITAGFFTQVAYL--HHSGVYRQISSGTELAIHPNS 628
Query: 755 SLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
+L Q +VV+GELL ++ VT + L+ L P
Sbjct: 629 TLYTLPQAQ-YVVYGELLQTTKLFMNYVTVIKREWLTELAP 668
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 709 (254.6 bits), Expect = 4.0e-69, P = 4.0e-69
Identities = 217/659 (32%), Positives = 323/659 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LPI Q ++ + ++ L++IGETG GKSTQ+ Q +GIA SI TQPR++AAI
Sbjct: 161 LPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRVAAI 220
Query: 225 SLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
SLA RV E G V + F +A +K+ YMTD +L+ + L + SC+I
Sbjct: 221 SLASRVATEM-GTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVI 279
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFD----LRLVIMSATADAHQLSKYFYDCGISHVVG 340
+DEAHERS +R + LRL+IMSAT A + YF + + V G
Sbjct: 280 IDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAG 339
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEWACEK 399
R FP++V +V + + YV + V V VH TE +G IL FLT E+E +
Sbjct: 340 RTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQ 399
Query: 400 F-----DAPSA----VALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVK 449
P++ + +P + L ++Q F+ P G RKVI +TN+AETS+TIPG++
Sbjct: 400 LAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIR 459
Query: 450 FVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRP 509
VIDSG VK FE ++VL+V VS++ A QRAGRAGR PG+CYRLYS+ DF
Sbjct: 460 VVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFE 519
Query: 510 LNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK-LNN- 567
PEI R +L L ++ LG+++ ID P I A+ L LGAI+ +N+
Sbjct: 520 AENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPVNSD 579
Query: 568 -GVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDE 626
F LTE G + P +++ + E + + A M ++F G
Sbjct: 580 RSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAM-QTDALFSGAGDSKS 638
Query: 627 KIKADCLKVQFCHRNGDLFTLLSVY----REWDSLPREERNKWCWENSVNAKSLRR-CQD 681
D ++ +F R GD TLL + + +D L ++ + + N KSL R
Sbjct: 639 DADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARY-GKAN-KSLEREYNQ 696
Query: 682 TIKEL--ETCL-EKEL--AIIIPSYW--LWNPHKYTEYDKWLKEIILSALAENVAMFSG- 733
TI++ + + E+ L A +I + K T + + + A + MF
Sbjct: 697 TIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVT-FSTCGADFMKMRKALALGMFLNS 755
Query: 734 --YDQLG--YEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFD 788
YD+ Y + M + L S + KP ++VF EL+ N+ + + VT D D
Sbjct: 756 CEYDRQEDRYRL-MINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGD 813
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 728 (261.3 bits), Expect = 1.1e-68, P = 1.1e-68
Identities = 199/639 (31%), Positives = 319/639 (49%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
D LP+ R+DI + I Q++++ GETG GK+TQL + + G+ + I TQPR++A
Sbjct: 74 DNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLA 133
Query: 223 AISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 281
A S+A RV EE + + V+ + F+ A +S + MTD LL +DR L +
Sbjct: 134 ARSVASRVAEELQSPLGE--VVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYD 191
Query: 282 CIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 341
II+DEAHERS +R DL+++I SAT D + SK+F + I V GR
Sbjct: 192 TIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGR 251
Query: 342 NFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD 401
+PV+ RY P T A + + V E+ E G IL F+ + E+ E+ +
Sbjct: 252 TYPVETRYRPLVQ-DTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIRDTAEQLN 309
Query: 402 APS---AVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVK 458
+ LP + +LS+ EQ VF S+ GRR ++ ATNVAETSLT+PG+++VID G +
Sbjct: 310 RRNYRDTEILPLYARLSYGEQSKVFSSHTGRR-IVLATNVAETSLTVPGIRYVIDPGTAR 368
Query: 459 ESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHR 518
S + T + L + +SQ+SANQR GR GR PG C RLY ++DF RP +PEI R
Sbjct: 369 ISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILR 428
Query: 519 VHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKF 578
+L +L++LA+G+ D+ F FI+ P + I L +L A+K G LT G+
Sbjct: 429 TNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQ 488
Query: 579 LVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFC 638
L ++ ++PRL ++++ + E LV+A+ ++ R D+K +D +F
Sbjct: 489 LSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDP---RERPMDKKQASDEAHRRFA 545
Query: 639 HRNGDLFTLLSVYREWDSLPRE----ERNKWCWENSVNAKSLRRCQDTIKELETCLEKEL 694
D + +++++ +E + K C + + +R QD +L+ + +L
Sbjct: 546 DPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVH-DL 604
Query: 695 AIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSC 754
W N YD L +LS L ++ ++ Y + + + P
Sbjct: 605 K------WRLNDTP-ANYDA-LHRALLSGLLSHIGFKDNNNE--Y-LGARNRKFFVFPGS 653
Query: 755 SLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
L G P W++ EL+ + + C + + L L
Sbjct: 654 PLAKKG--PKWIMAAELMETSKLFARCCAKIEPEWLEPL 690
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 728 (261.3 bits), Expect = 1.1e-68, P = 1.1e-68
Identities = 199/639 (31%), Positives = 319/639 (49%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
D LP+ R+DI + I Q++++ GETG GK+TQL + + G+ + I TQPR++A
Sbjct: 74 DNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLA 133
Query: 223 AISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 281
A S+A RV EE + + V+ + F+ A +S + MTD LL +DR L +
Sbjct: 134 ARSVASRVAEELQSPLGE--VVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYD 191
Query: 282 CIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGR 341
II+DEAHERS +R DL+++I SAT D + SK+F + I V GR
Sbjct: 192 TIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGR 251
Query: 342 NFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFD 401
+PV+ RY P T A + + V E+ E G IL F+ + E+ E+ +
Sbjct: 252 TYPVETRYRPLVQ-DTEADLDQIEGIFAAVDEL-VAEGLGDILIFMNGEREIRDTAEQLN 309
Query: 402 APS---AVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVK 458
+ LP + +LS+ EQ VF S+ GRR ++ ATNVAETSLT+PG+++VID G +
Sbjct: 310 RRNYRDTEILPLYARLSYGEQSKVFSSHTGRR-IVLATNVAETSLTVPGIRYVIDPGTAR 368
Query: 459 ESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHR 518
S + T + L + +SQ+SANQR GR GR PG C RLY ++DF RP +PEI R
Sbjct: 369 ISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILR 428
Query: 519 VHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKF 578
+L +L++LA+G+ D+ F FI+ P + I L +L A+K G LT G+
Sbjct: 429 TNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQ 488
Query: 579 LVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFC 638
L ++ ++PRL ++++ + E LV+A+ ++ R D+K +D +F
Sbjct: 489 LSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDP---RERPMDKKQASDEAHRRFA 545
Query: 639 HRNGDLFTLLSVYREWDSLPRE----ERNKWCWENSVNAKSLRRCQDTIKELETCLEKEL 694
D + +++++ +E + K C + + +R QD +L+ + +L
Sbjct: 546 DPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVH-DL 604
Query: 695 AIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSC 754
W N YD L +LS L ++ ++ Y + + + P
Sbjct: 605 K------WRLNDTP-ANYDA-LHRALLSGLLSHIGFKDNNNE--Y-LGARNRKFFVFPGS 653
Query: 755 SLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
L G P W++ EL+ + + C + + L L
Sbjct: 654 PLAKKG--PKWIMAAELMETSKLFARCCAKIEPEWLEPL 690
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 719 (258.2 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 195/574 (33%), Positives = 291/574 (50%)
Query: 134 VDVFRFEDCQRFDWSRIQAFI-VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 192
V FR D+ + QAF + +R LPI YR IL+ + Q++V+ G+TGC
Sbjct: 130 VSEFRGALLHYLDFGQKQAFARLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGC 189
Query: 193 GKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSS 251
GKSTQ+ Q+L +G + + CTQPR+IA ISLA+RV ES Y S + Y F S
Sbjct: 190 GKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGLESLSQY--GSQVGYQIRFES 244
Query: 252 AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD 311
+ +K++++T LL+H + L + +IVDE HER RR D
Sbjct: 245 TRSAATKIVFLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPD 304
Query: 312 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD----- 366
L++++MSAT + S YF + V GR FP+ V Y P T++ +
Sbjct: 305 LKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIR 364
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFC 421
V+ + + E+ G +L FL+ E+ E A + V LP H LS Q
Sbjct: 365 VLEAIDSKYPPEERGDLLVFLSGLAEIGAVLEAAQAHARRSGRWVVLPLHSTLSVAAQDK 424
Query: 422 VFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 480
VF + PG RK I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+S
Sbjct: 425 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 484
Query: 481 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 540
A QR GRAGRT PG C+RLY++SD++ PEI RV L VL++ ++ + D + F
Sbjct: 485 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFP 544
Query: 541 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 600
FI+ P A ++E AI L GA+ +G LT G L +L ++ +GK+++ L
Sbjct: 545 FIEPPPAASLETAILYLRDQGAL---DGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHL 601
Query: 601 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE 660
L +AA ++ S F R + K L+ H GD FTL +V+ W + +
Sbjct: 602 AEPVLTIAAALS-VQSPFTRSTRSNPKCAWRALESD--H--GDPFTLFNVFNNWVQVKSD 656
Query: 661 ERNK---WCWENSVNAKSLRRCQDTIKELETCLE 691
K WC + L + ++ + LE
Sbjct: 657 RSTKSRRWCRREGIEEHRLYEMANLRRQFKELLE 690
Score = 41 (19.5 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 870 EEVLGLVSDVLEYEKKWLHNECIEKCLYQGAGV---SPSV-ALFGAGAEIKHLE----LE 921
+E+L ++ + Y + L ++ LY G +PS+ LFG+ A H
Sbjct: 988 KELLQFMASKVSYSLRRLTGLEVQN-LYVGPQTITAAPSLPGLFGSSATSPHPTKGGYAV 1046
Query: 922 RRFLTVDVYHSNANILDD 939
FLT + SNA++ D
Sbjct: 1047 TDFLTYNCLTSNADLYSD 1064
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 706 (253.6 bits), Expect = 1.6e-66, P = 1.6e-66
Identities = 191/576 (33%), Positives = 290/576 (50%)
Query: 134 VDVFRFEDCQRFDWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 192
V FR D+ + QAF + + +R LPI Y IL+ + Q++V+ G+TGC
Sbjct: 132 VSEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGC 191
Query: 193 GKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSS 251
GKSTQ+ Q+L +G + + CTQPR+IA ISLA+RV ES Y S + Y F S
Sbjct: 192 GKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGFESLSQY--GSQVGYQIRFES 246
Query: 252 AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD 311
+ +K++++T LL+ + L + +IVDE HER +R D
Sbjct: 247 TRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPD 306
Query: 312 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD----- 366
L++++MSAT + S YF + V GR FP+ V Y P T++ + +
Sbjct: 307 LKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLR 366
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFC 421
V+ + + E+ G +L FL+ E+ + A ++ V LP H LS +Q
Sbjct: 367 VLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQAYASLTQRWVVLPLHSALSVSDQDK 426
Query: 422 VFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 480
VF P G RK I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+S
Sbjct: 427 VFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 486
Query: 481 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 540
A QR GRAGRT PG CYRLY++SD++ PEI RV L VL++ ++ + D + F
Sbjct: 487 AEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFP 546
Query: 541 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 600
FI+ P ++E AI L + GA+ + LT G L +L ++ +GK+++ L
Sbjct: 547 FIEPPPPASVETAILYLQEQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFSL 603
Query: 601 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQ--FCHRNGDLFTLLSVYREWDSLP 658
L +AA ++ S F R + DC + GD FTL +V+ W +
Sbjct: 604 AEPVLTIAAALS-VQSPFTRSAQSN----LDCATARRPLESDQGDPFTLFNVFNAWVQVK 658
Query: 659 REERN---KWCWENSVNAKSLRRCQDTIKELETCLE 691
E KWC V L + ++ + LE
Sbjct: 659 SERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLE 694
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 685 (246.2 bits), Expect = 1.6e-66, P = 1.6e-66
Identities = 188/565 (33%), Positives = 299/565 (52%)
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
+ CTQPR++AA+S+A RV EE + + Y F + + Y TD LL+
Sbjct: 132 VACTQPRRVAAMSVATRVAEEMDVVLGQE--VGYSIRFEDCISERTVLKYCTDGMLLREA 189
Query: 272 MNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY 331
MN L + +I+DEAHER+ R D+++VIMSAT DA + +YF
Sbjct: 190 MNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFE 249
Query: 332 DCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKM 391
DC + V GR FPV++ + P A A + MV EV EG IL FLT +
Sbjct: 250 DCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEV-----EGDILLFLTGQE 304
Query: 392 EVEWACEKFD---------APSAVALPFHGQLSFDEQFCVFK-SYPGR------RKVIFA 435
E+E AC++ D A + +P + L Q +F+ + P R RK + +
Sbjct: 305 EIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVIS 364
Query: 436 TNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGR 495
TN+AETSLTI GV FVID G K+ + P + L VC +S++SA QRAGRAGRT+PG+
Sbjct: 365 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGK 424
Query: 496 CYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAI 554
C+RLY+++ + + +Q PEI R +LG VL++ LG D+ FDF+D P+ + + A+
Sbjct: 425 CFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRAL 484
Query: 555 RNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANA 614
L L AI ++G ELTE G + + ++P+L K++++ E L + A+++
Sbjct: 485 ELLNYLQAIN-DDG--ELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVP 541
Query: 615 SSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAK 674
C V ++ + +AD K +F H +GD TLL+VY + +E +WC++N +N +
Sbjct: 542 Q---CWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ--NQEDPQWCYDNFINYR 596
Query: 675 SLRRCQDTIK-ELETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFS 732
+++ DT++ +L ++K L + + K +Y +++ +++ VA
Sbjct: 597 TMKTA-DTVRTQLSRVMDKYNLRRVSTDF------KSRDYYLNIRKALVAGFFMQVAHL- 648
Query: 733 GYDQLGYEVAMT-GQHVQLHPSCSL 756
++ G+ V + Q V LHPS L
Sbjct: 649 --ERSGHYVTVKDNQLVNLHPSTVL 671
Score = 347 (127.2 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 86/247 (34%), Positives = 132/247 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL----VQFLADS--GIAAEQS--IVCT 216
LP++ Y++ + + Q + L+GETG GK+TQ+ V+F+ G Q+ + CT
Sbjct: 76 LPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACT 135
Query: 217 QPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
QPR++AA+S+A RV EE + + Y F + + Y TD LL+ MN
Sbjct: 136 QPRRVAAMSVATRVAEEMDVVLGQE--VGYSIRFEDCISERTVLKYCTDGMLLREAMNSP 193
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
L + +I+DEAHER+ R D+++VIMSAT DA + +YF DC +
Sbjct: 194 LLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPL 253
Query: 336 SHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEVE 394
V GR FPV++ + P +A Y+ +R V ++H E+ EG IL FLT + E+E
Sbjct: 254 LSVPGRTFPVEIFFTP------NAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 395 WACEKFD 401
AC++ D
Sbjct: 308 EACKRID 314
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 685 (246.2 bits), Expect = 1.6e-66, P = 1.6e-66
Identities = 188/565 (33%), Positives = 299/565 (52%)
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
+ CTQPR++AA+S+A RV EE + + Y F + + Y TD LL+
Sbjct: 132 VACTQPRRVAAMSVATRVAEEMDVVLGQE--VGYSIRFEDCISERTVLKYCTDGMLLREA 189
Query: 272 MNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY 331
MN L + +I+DEAHER+ R D+++VIMSAT DA + +YF
Sbjct: 190 MNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFE 249
Query: 332 DCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKM 391
DC + V GR FPV++ + P A A + MV EV EG IL FLT +
Sbjct: 250 DCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEV-----EGDILLFLTGQE 304
Query: 392 EVEWACEKFD---------APSAVALPFHGQLSFDEQFCVFK-SYPGR------RKVIFA 435
E+E AC++ D A + +P + L Q +F+ + P R RK + +
Sbjct: 305 EIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVIS 364
Query: 436 TNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGR 495
TN+AETSLTI GV FVID G K+ + P + L VC +S++SA QRAGRAGRT+PG+
Sbjct: 365 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGK 424
Query: 496 CYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAI 554
C+RLY+++ + + +Q PEI R +LG VL++ LG D+ FDF+D P+ + + A+
Sbjct: 425 CFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRAL 484
Query: 555 RNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANA 614
L L AI ++G ELTE G + + ++P+L K++++ E L + A+++
Sbjct: 485 ELLNYLQAIN-DDG--ELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVP 541
Query: 615 SSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAK 674
C V ++ + +AD K +F H +GD TLL+VY + +E +WC++N +N +
Sbjct: 542 Q---CWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ--NQEDPQWCYDNFINYR 596
Query: 675 SLRRCQDTIK-ELETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFS 732
+++ DT++ +L ++K L + + K +Y +++ +++ VA
Sbjct: 597 TMKTA-DTVRTQLSRVMDKYNLRRVSTDF------KSRDYYLNIRKALVAGFFMQVAHL- 648
Query: 733 GYDQLGYEVAMT-GQHVQLHPSCSL 756
++ G+ V + Q V LHPS L
Sbjct: 649 --ERSGHYVTVKDNQLVNLHPSTVL 671
Score = 347 (127.2 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 86/247 (34%), Positives = 132/247 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL----VQFLADS--GIAAEQS--IVCT 216
LP++ Y++ + + Q + L+GETG GK+TQ+ V+F+ G Q+ + CT
Sbjct: 76 LPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACT 135
Query: 217 QPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
QPR++AA+S+A RV EE + + Y F + + Y TD LL+ MN
Sbjct: 136 QPRRVAAMSVATRVAEEMDVVLGQE--VGYSIRFEDCISERTVLKYCTDGMLLREAMNSP 193
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
L + +I+DEAHER+ R D+++VIMSAT DA + +YF DC +
Sbjct: 194 LLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPL 253
Query: 336 SHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEVE 394
V GR FPV++ + P +A Y+ +R V ++H E+ EG IL FLT + E+E
Sbjct: 254 LSVPGRTFPVEIFFTP------NAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 395 WACEKFD 401
AC++ D
Sbjct: 308 EACKRID 314
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 685 (246.2 bits), Expect = 1.6e-66, P = 1.6e-66
Identities = 194/640 (30%), Positives = 324/640 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI ++ +L + + V++G+TG GK+TQ+ QFL +G ++ ++ TQPR+IAA
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
++A RV EE E + Y F +++ ++TD L++ + D LSR S
Sbjct: 81 TTVALRVAEEYGS--EVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSI 138
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDC-G------- 334
++VDEAHERS +R +LR++I SAT A Q +F G
Sbjct: 139 VMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDRE 198
Query: 335 -----ISHVV---GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAF 386
I +V GR +P+D+ Y+ S Y+ V V +VH E +G IL F
Sbjct: 199 EPQGTIGTIVSLEGRTYPIDILYLE------SPAEDYLQRAVSTVLDVHENEPDGDILVF 252
Query: 387 LTSKMEVEWACEKFDAPSA---------VALPFHGQLSFDEQFCVFKSYPGR-RKVIFAT 436
LT + E+E A + +A + LP LS ++Q +F+ P RKVIF+T
Sbjct: 253 LTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFST 312
Query: 437 NVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRC 496
N+AE S+TI G+ +V+DSG VK + P TG+ L +S+++A QRAGRAGRT+PG+C
Sbjct: 313 NIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKC 372
Query: 497 YRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRN 556
+RLY++ + + PE+ R +L +L++ ALGI +V FDF+ P A+ + A+
Sbjct: 373 FRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTKALEL 432
Query: 557 LVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 615
L LGA+ + +LT+ G + +L ++P + K +LS E L +AA+ +
Sbjct: 433 LYSLGAL---DDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAGG 489
Query: 616 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 675
++ + + E+ + + + +F GD T L+VY+ + + R+E +C EN +N K+
Sbjct: 490 DVW--IQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESG-FCHENLLNYKT 546
Query: 676 LRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTE---YDKWLKEIILSALAENVAMFS 732
+ R +L+ LE+ I + + + ++ + + + A
Sbjct: 547 MSRAVSIRAQLKRYLER-FGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQ 605
Query: 733 GYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELL 772
D ++ G + HPS L+F +K WV+F E++
Sbjct: 606 A-DGT-FQTVQGGTTLHAHPSS--LMFNRKADWVIFHEVM 641
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 682 (245.1 bits), Expect = 3.3e-66, P = 3.3e-66
Identities = 219/737 (29%), Positives = 361/737 (48%)
Query: 95 KEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSR--IQ- 151
+E E + R ++ K+ H K+ + K Y D E+ F++S+ Q
Sbjct: 110 EEPENLPTRTQQEKH-QHSKNKFKQKLEFKRKTVVYKDQDDEDDEEENNTFNFSQNSFQL 168
Query: 152 AFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ 211
A ++ ++ + LPIY ++ I+ I Q+ ++IGETG GKSTQ+ QFL +
Sbjct: 169 AATAQQLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPEN---PK 225
Query: 212 SIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHF 271
I TQPR++AA SLA RV EE GC V F++ + +K+ Y+TD LL+
Sbjct: 226 MIGVTQPRRVAAASLAARVSEEY-GCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREI 284
Query: 272 MNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXC--RRFDLRLVIMSATADAHQLSKY 329
M D +L++ S II+DEAHER+ +R DL++V+MSAT +A S +
Sbjct: 285 MLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNF 344
Query: 330 FYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTS 389
F + I ++ G+ +PV Y+ + V ++R + +++ E EG +L FL
Sbjct: 345 FGNAPILYIEGKMYPVSQFYLDAESE------DIVDTMIRSIIQINLNEPEGDVLCFLPG 398
Query: 390 KMEVEWACEKF----------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNV 438
+ E++ C K +AP V LP + LS +Q +F+ P GRRKVI ATN+
Sbjct: 399 QEEID-NCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNI 457
Query: 439 AETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYR 498
AETS+T+ GVK+VIDSG+ K ++ G++ L +SQ+SA QRAGRAGR G+ +R
Sbjct: 458 AETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFR 517
Query: 499 LYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLV 558
LY +S + P QE EI R + + VL + LG+ D+ + +++ P AI A+ L
Sbjct: 518 LYPESTYMALPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAILSALNTLY 577
Query: 559 QLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIF 618
LGA+ ++G ++T G + L + P+L ++++ + + +A+ ++ + I
Sbjct: 578 TLGALN-DSG--KVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLIT 634
Query: 619 CRVGSDDEKIKADCLKVQFC---HRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKS 675
G ++I + Q C + +GDL L ++ + + +E WC E + + K
Sbjct: 635 NVTGEARDEINFK--RRQHCPLGNIHGDLIALYEYFQAYQAQGKE----WCKELAFSFKG 688
Query: 676 LRRCQD-----------TIKELETCLE----KELAIIIPSYWLWNPHKYTEYDKWLKEII 720
+ + TIK+ ++ K+LA + K + LK
Sbjct: 689 FKNVEKIKYQLQEYMMTTIKQDDSLTNAEKNKQLAKLRAQLDNEETDKQLDVPSILKSF- 747
Query: 721 LSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTW--VVFGELLSVNNQY 778
L N A+ G + TGQ + +HPS +L FG KP +++ E + Y
Sbjct: 748 LKGYITNTAV--GMPDRSFRTFNTGQLISVHPSSTL--FG-KPNMDAIMYIEYVFTTKGY 802
Query: 779 LVCVTAFDFDSLSTLCP 795
V+A + L + P
Sbjct: 803 ARNVSAIELSWLQEIAP 819
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 711 (255.3 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 189/562 (33%), Positives = 292/562 (51%)
Query: 146 DWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD 204
D+ + QAF + + +R LPI Y IL+ + Q++V+ G+TGCGKSTQ+ Q+L
Sbjct: 142 DFCQKQAFGRLAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 205 SGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMT 263
+G + + CTQPR+IA ISLA+RV ES Y S + Y F S + +K++++T
Sbjct: 202 AGCS---HVACTQPRRIACISLAKRVGFESLSQY--GSQVGYQIRFESTRSAATKIVFLT 256
Query: 264 DHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADA 323
LL+ + L + +IVDE HER +R DL++V+MSAT +
Sbjct: 257 VGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINI 316
Query: 324 HQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD-----VVRMVGEVHTTE 378
S YF + + V GR FP+ V Y P T++ + + V+ + + E
Sbjct: 317 SLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPE 376
Query: 379 KEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFCVFK-SYPGRRKV 432
+ G +L FL+ E+ E A ++ V LP H LS +Q VF + PG RK
Sbjct: 377 ERGDLLVFLSGMAEISAVLEPAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKC 436
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+SA QR GRAGRT
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEM 552
PG C+RLY++SD++ PEI RV L VL++ ++ + D + F FI+ P ++E
Sbjct: 497 PGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLET 556
Query: 553 AIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
AI L GA+ + LT G L +L ++ +GK+++ L L +AA ++
Sbjct: 557 AILYLRDQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 613
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE-RN--KWCWEN 669
+ F R + + A ++ GD FTLL+V+ W + E RN KWC
Sbjct: 614 -VQTPFTRSAQSNPECAATRRPLE--SDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHR 670
Query: 670 SVNAKSLRRCQDTIKELETCLE 691
+ L + ++ + LE
Sbjct: 671 GIEEHRLYEMANLRRQFKELLE 692
Score = 39 (18.8 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 766 VVFGELLSVNNQYLV-CV 782
V F LL N YLV CV
Sbjct: 879 VTFVSLLETNKPYLVNCV 896
Score = 39 (18.8 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 735 DQLGYEVAMTGQHVQLHPSCSLLIFGQKP 763
DQ+ + T Q V LHP+C +F P
Sbjct: 826 DQIFH--TQTKQGVVLHPTC---VFTNSP 849
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 700 (251.5 bits), Expect = 7.2e-66, P = 7.2e-66
Identities = 189/574 (32%), Positives = 292/574 (50%)
Query: 134 VDVFRFEDCQRFDWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 192
V FR D+S+ QAF + + + LPI Y IL+ + Q++V+ G+TGC
Sbjct: 129 VTEFRRALLHYLDFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGC 188
Query: 193 GKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSS 251
GKSTQ+ Q+L +G + + CTQPR+IA ISLA+RV ES Y S + Y F S
Sbjct: 189 GKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVSFESLSQY--GSQVGYQIRFES 243
Query: 252 AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD 311
+ +K++++T LL+ + L + +IVDE HER +R D
Sbjct: 244 TRTAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPD 303
Query: 312 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD----- 366
L++++MSAT + S YF + V GR FP+ V Y P ++ + +
Sbjct: 304 LKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLR 363
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFC 421
V+ + + E+ G +L FL+ E+ E ++ V LP H LS +Q
Sbjct: 364 VLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQTYASRTQRWVVLPLHSALSVADQDK 423
Query: 422 VFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 480
VF + PG RK I +TN+AETS+TI G++FV+DSG VKE ++P ++ L+ +SQ+S
Sbjct: 424 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQAS 483
Query: 481 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 540
A QR GRAGRT PG C+RLY++SD++ PEI RV L VL++ ++ + D + F
Sbjct: 484 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFP 543
Query: 541 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 600
FI+ P ++E AI L GA+ + LT G L +L ++ +GK+++ L
Sbjct: 544 FIEPPPPASLETAILYLQDQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFHL 600
Query: 601 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE 660
L +AA ++ S F R + + A ++ GD FTL +V+ W + E
Sbjct: 601 AEPVLTIAAALS-VQSPFTRSAQSNPECAAARRPLE--SDQGDPFTLFNVFNAWVQVKSE 657
Query: 661 E-RN--KWCWENSVNAKSLRRCQDTIKELETCLE 691
RN KWC + L + ++ + LE
Sbjct: 658 RSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLE 691
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 700 (251.5 bits), Expect = 8.5e-66, P = 8.5e-66
Identities = 189/574 (32%), Positives = 292/574 (50%)
Query: 134 VDVFRFEDCQRFDWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 192
V FR D+S+ QAF + + + LPI Y IL+ + Q++V+ G+TGC
Sbjct: 134 VTEFRRALLHYLDFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGC 193
Query: 193 GKSTQLVQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSS 251
GKSTQ+ Q+L +G + + CTQPR+IA ISLA+RV ES Y S + Y F S
Sbjct: 194 GKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVSFESLSQY--GSQVGYQIRFES 248
Query: 252 AQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD 311
+ +K++++T LL+ + L + +IVDE HER +R D
Sbjct: 249 TRTAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPD 308
Query: 312 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD----- 366
L++++MSAT + S YF + V GR FP+ V Y P ++ + +
Sbjct: 309 LKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLR 368
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFC 421
V+ + + E+ G +L FL+ E+ E ++ V LP H LS +Q
Sbjct: 369 VLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQTYASRTQRWVVLPLHSALSVADQDK 428
Query: 422 VFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 480
VF + PG RK I +TN+AETS+TI G++FV+DSG VKE ++P ++ L+ +SQ+S
Sbjct: 429 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQAS 488
Query: 481 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFD 540
A QR GRAGRT PG C+RLY++SD++ PEI RV L VL++ ++ + D + F
Sbjct: 489 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFP 548
Query: 541 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRL 600
FI+ P ++E AI L GA+ + LT G L +L ++ +GK+++ L
Sbjct: 549 FIEPPPPASLETAILYLQDQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFHL 605
Query: 601 GREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE 660
L +AA ++ S F R + + A ++ GD FTL +V+ W + E
Sbjct: 606 AEPVLTIAAALS-VQSPFTRSAQSNPECAAARRPLE--SDQGDPFTLFNVFNAWVQVKSE 662
Query: 661 E-RN--KWCWENSVNAKSLRRCQDTIKELETCLE 691
RN KWC + L + ++ + LE
Sbjct: 663 RSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLE 696
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 678 (243.7 bits), Expect = 9.0e-66, P = 9.0e-66
Identities = 183/546 (33%), Positives = 286/546 (52%)
Query: 162 EDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKI 221
+ LP++ R IL+ + ++++ ETG GK+TQ+ QFL +G A I TQPR++
Sbjct: 65 QKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRV 124
Query: 222 AAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRIS 281
AAI++A+RV +E G D+V F +K+ ++TD LL+ + DR L + S
Sbjct: 125 AAITVARRVAQELNGTI-GDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYS 183
Query: 282 CIIVDEAHERSXXXXXXXXXXXXXXCRR-----FDLRLVIMSATADAHQLSKYFYDCGIS 336
II+DEAHER+ R +L++V+ SAT D YF +C
Sbjct: 184 VIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGM 242
Query: 337 HVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVH-TTEKEGTILAFLTSKMEVEW 395
++ GR +PV V + Y+ V+ + +H TT K +L FLT + E+E
Sbjct: 243 YLEGRTYPVRVMHTK------EEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIES 296
Query: 396 ACE------KFDAPSAVAL---PFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTI 445
+ K D L + QLS +Q F P RKVI ATN+AETS+TI
Sbjct: 297 LAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITI 356
Query: 446 PGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDF 505
PG++ VID G VKE F G++VL+ R+S++ A QRAGRAGR G CYR Y+K++
Sbjct: 357 PGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEM 416
Query: 506 ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
++ +PEI R + VL++LAL I D FDF+D P + A ++L LGAIK
Sbjct: 417 DSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKT 475
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
+ + +T G+ +V+ ++P+ KL+L+ E L L +V+++ +F V + +
Sbjct: 476 GDDSY-ITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSS-DHVF--VSNSE 531
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKE 685
+ A +F ++GD TLL+V+ + L E+ WC +N +N +SL ++ ++
Sbjct: 532 KNEMAALAHAKFQSKHGDHLTLLNVFNGF--LKSEKPKMWCHDNYLNLRSLTYARNVRRQ 589
Query: 686 LETCLE 691
L E
Sbjct: 590 LREISE 595
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 45/175 (25%), Positives = 88/175 (50%)
Query: 623 SDDEKIKADCLK-VQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQD 681
S+ EK + L +F ++GD TLL+V+ + L E+ WC +N +N +SL ++
Sbjct: 528 SNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF--LKSEKPKMWCHDNYLNLRSLTYARN 585
Query: 682 TIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEV 741
++L + + L + + S ++ + LK+ IL+ EN+A+ D G+ +
Sbjct: 586 VRRQLRE-ISEHLHLALNS---------SDDIEMLKKCILNGFFENIAVLQR-D--GFYI 632
Query: 742 AMTGQ-HVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
+G ++HPS S+L KP++++F E++ +L VT + + + P
Sbjct: 633 TASGNIRSKIHPS-SVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 384 (140.2 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 104/296 (35%), Positives = 160/296 (54%)
Query: 139 FEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL 198
FED ++ +++ I+ E KRL PIY YR DIL+ I +IL+L+GETG GKSTQL
Sbjct: 417 FEDIKKRKEKKMKK-IIDERKRL----PIYSYRYDILKAIKNNKILILVGETGSGKSTQL 471
Query: 199 VQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDS 257
Q+L + +I+CTQPR+IA I++A RV EE + + Y F + +
Sbjct: 472 TQYLYECKYHMYGNIICTQPRRIACIAIANRVAEEMN--VKIGKEVGYVIRFQNKTSEAT 529
Query: 258 KVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIM 317
K++YMTD L+ + + L IS +I+DEAHER+ R ++R+VI
Sbjct: 530 KIMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVIS 589
Query: 318 SATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTT 377
SAT DA ++S YF I +V GR + VD+ Y T + +Y+S +V + ++H T
Sbjct: 590 SATLDAEKISTYFNCAPIFYVPGRKYNVDIYY----TINNES--NYISAIVITILQIHIT 643
Query: 378 EKEGTILAFLTSKMEVEWACEKFD------AP---SAVALPFHGQLSFDEQFCVFK 424
+ +G IL FL + E+E ++ + AP + V LP + L + Q +F+
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 380 (138.8 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 104/357 (29%), Positives = 185/357 (51%)
Query: 429 RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRA 488
RRK+I +TN+ ETS+TI + +VIDSG+ K+ + P +G+ L S++S NQR GRA
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 489 GRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAK 548
GR G+C+RL++K F N PEI R + +L + +LG+ D+ FDF+D PS
Sbjct: 862 GRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 549 AIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRR-RLGREGLVL 607
I + L LGA+ + G LT G+ + + + + K+ILS + E L +
Sbjct: 922 VIIKGLELLYSLGALN-DEG--NLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNV 978
Query: 608 AAVMANASSIFCRVGSDDEKIKADCLKVQFC-HRNGDLFTLLSVYREWDSLPREERNKWC 666
A+++ +A++IF V EK +A+ +K F GD L++Y++ + +C
Sbjct: 979 ASMLTHANNIFY-VQKGKEK-EAENIKKMFIIEGGGDFLLFLNIYKQCEE--NNFSTSFC 1034
Query: 667 WENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAE 726
+++ + +L + +D +L + EK + I I + + N +K+ I+SA
Sbjct: 1035 YDHFLQYHTLIKVKDVKTQLLSICEK-IDIPITTCGIENHESINN----IKKSIVSAFFT 1089
Query: 727 NVAMFSGYDQLGYEVAMTGQHVQLHPSCSL----LIFGQKPTWVVFGELLSVNNQYL 779
N A+ +L ++ Q V ++P+ L ++ + ++F E++ +N Y+
Sbjct: 1090 NAALPVNKTEL--KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYI 1144
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 384 (140.2 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 104/296 (35%), Positives = 160/296 (54%)
Query: 139 FEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL 198
FED ++ +++ I+ E KRL PIY YR DIL+ I +IL+L+GETG GKSTQL
Sbjct: 417 FEDIKKRKEKKMKK-IIDERKRL----PIYSYRYDILKAIKNNKILILVGETGSGKSTQL 471
Query: 199 VQFLADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDS 257
Q+L + +I+CTQPR+IA I++A RV EE + + Y F + +
Sbjct: 472 TQYLYECKYHMYGNIICTQPRRIACIAIANRVAEEMN--VKIGKEVGYVIRFQNKTSEAT 529
Query: 258 KVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIM 317
K++YMTD L+ + + L IS +I+DEAHER+ R ++R+VI
Sbjct: 530 KIMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVIS 589
Query: 318 SATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTT 377
SAT DA ++S YF I +V GR + VD+ Y T + +Y+S +V + ++H T
Sbjct: 590 SATLDAEKISTYFNCAPIFYVPGRKYNVDIYY----TINNES--NYISAIVITILQIHIT 643
Query: 378 EKEGTILAFLTSKMEVEWACEKFD------AP---SAVALPFHGQLSFDEQFCVFK 424
+ +G IL FL + E+E ++ + AP + V LP + L + Q +F+
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 380 (138.8 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 104/357 (29%), Positives = 185/357 (51%)
Query: 429 RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRA 488
RRK+I +TN+ ETS+TI + +VIDSG+ K+ + P +G+ L S++S NQR GRA
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 489 GRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAK 548
GR G+C+RL++K F N PEI R + +L + +LG+ D+ FDF+D PS
Sbjct: 862 GRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 549 AIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRR-RLGREGLVL 607
I + L LGA+ + G LT G+ + + + + K+ILS + E L +
Sbjct: 922 VIIKGLELLYSLGALN-DEG--NLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNV 978
Query: 608 AAVMANASSIFCRVGSDDEKIKADCLKVQFC-HRNGDLFTLLSVYREWDSLPREERNKWC 666
A+++ +A++IF V EK +A+ +K F GD L++Y++ + +C
Sbjct: 979 ASMLTHANNIFY-VQKGKEK-EAENIKKMFIIEGGGDFLLFLNIYKQCEE--NNFSTSFC 1034
Query: 667 WENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAE 726
+++ + +L + +D +L + EK + I I + + N +K+ I+SA
Sbjct: 1035 YDHFLQYHTLIKVKDVKTQLLSICEK-IDIPITTCGIENHESINN----IKKSIVSAFFT 1089
Query: 727 NVAMFSGYDQLGYEVAMTGQHVQLHPSCSL----LIFGQKPTWVVFGELLSVNNQYL 779
N A+ +L ++ Q V ++P+ L ++ + ++F E++ +N Y+
Sbjct: 1090 NAALPVNKTEL--KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYI 1144
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 698 (250.8 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 187/562 (33%), Positives = 288/562 (51%)
Query: 146 DWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD 204
D+ + QAF + + +R LPI Y IL+ + Q++V+ G+TGCGKSTQ+ Q+L
Sbjct: 142 DFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 205 SGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMT 263
+G + + CTQPR+IA ISLA+RV ES Y S + Y F S + +K++++T
Sbjct: 202 AGFS---HVACTQPRRIACISLAKRVGFESLSQY--GSQVGYQIRFESTRSAATKIVFLT 256
Query: 264 DHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADA 323
LL+ + L + +IVDE HER R DL++++MSAT +
Sbjct: 257 VGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINI 316
Query: 324 HQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD-----VVRMVGEVHTTE 378
S YF + + V GR FP+ V Y P T++ + + V+ + + E
Sbjct: 317 SLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPE 376
Query: 379 KEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSFDEQFCVFK-SYPGRRKV 432
+ G +L FL+ E+ E ++ V LP H LS +Q VF + PG RK
Sbjct: 377 ERGDLLVFLSGMAEISAVLEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKC 436
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+SA QR GRAGRT
Sbjct: 437 ILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTG 496
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEM 552
PG C+RLY++SD++ PEI RV L VL++ ++ + D + F FI+ P ++E
Sbjct: 497 PGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLET 556
Query: 553 AIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
AI L GA+ + LT G L +L ++ +GK+++ L L +AA ++
Sbjct: 557 AILYLRDQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 613
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE-RN--KWCWEN 669
S F R + A ++ GD FTL +V+ W + E RN KWC
Sbjct: 614 -VQSPFTRSAQSSPECAAARRPLE--SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRR 670
Query: 670 SVNAKSLRRCQDTIKELETCLE 691
+ L + ++ + LE
Sbjct: 671 GIEEHRLYEMANLRRQFKELLE 692
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 385 (140.6 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 127/457 (27%), Positives = 222/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 276 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 334
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 335 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 395 GRAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCE 508
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 509 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 568
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 569 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PKETFEGP-KH----EVL 619
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 620 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 369 (135.0 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 83/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ I++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II+
Sbjct: 114 VAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290
Score = 49 (22.3 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 614 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 665
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 638 (229.6 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 178/537 (33%), Positives = 272/537 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP+Y + IL + ++V+ TG GK+TQL L ++G +I TQPR+IA +
Sbjct: 7 LPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAVL 66
Query: 225 SLAQRVREESRGCYEDDSVICYPS-FSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
S+++ + ++ + ++ Y F ++K+ MTD LLQ D LS+ S I
Sbjct: 67 SVSEFIAKQV--LHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSII 124
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNF 343
+VDEAHERS +R D R+VI SAT + S+YF +C + + +
Sbjct: 125 MVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAY 184
Query: 344 PVDVRY----VPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 399
PV V + P +T A A+ + +V +V V + +G IL FL + ++ +
Sbjct: 185 PVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITR 244
Query: 400 FDAP----SAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 454
LP +G+LS +EQ VF P G+RKV+ ATN+AETS+TI V VIDS
Sbjct: 245 LSHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDS 304
Query: 455 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLNQE 513
G+VK + + P + L +SQ+S NQR GRAGR G CYRLYS+ DFE R P E
Sbjct: 305 GLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLE 364
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
EI+R L V+R+ LGI D + FDFI P I A L LGA++ + L+
Sbjct: 365 -EIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRS---LS 420
Query: 574 EEGKFLVKLGIEPRLGKLILSCFRRRLGR-EGLVLAAVMANASSIFCRVGSDDEKIKADC 632
E GK + + PR ++I+ RR + +++AA +A S + S+D++ K
Sbjct: 421 EIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPL--IFSEDQEEKTKK 478
Query: 633 LKVQFCHRNGDLFTLLSVYREWDSLPREERNK--WCWENSVNAKSLRRCQDTIKELE 687
F GD + L +YR + +E NK +C ++ + + + ++LE
Sbjct: 479 AHGTFSDPMGDFVSFLRIYRAY----AQENNKHSFCQHFYLDERIMAEISNIKEQLE 531
Score = 63 (27.2 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 742 AMTGQHVQLHP-SCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPL 798
++T + + +HP SC ++ +P ++V GE++ + Y + V+ + P+ L
Sbjct: 573 SLTAECIHIHPGSC---VYKDRPKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAPALL 627
Score = 39 (18.8 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 844 FMDERIGIEVNVDQNQILLFASSQDIEEVLGLVSDVLEY 882
++DERI E++ + Q+ L S + G V EY
Sbjct: 514 YLDERIMAEISNIKEQLELIVSGMGFPLLTG--GTVEEY 550
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 384 (140.2 bits), Expect = 4.5e-65, Sum P(2) = 4.5e-65
Identities = 127/457 (27%), Positives = 222/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 276 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 334
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 335 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 395 GRAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCE 508
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 509 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 568
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 569 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PRETFEGP-KH----EVL 619
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 620 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 367 (134.2 bits), Expect = 4.5e-65, Sum P(2) = 4.5e-65
Identities = 82/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II+
Sbjct: 114 VAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290
Score = 49 (22.3 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 614 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 665
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 384 (140.2 bits), Expect = 4.5e-65, Sum P(2) = 4.5e-65
Identities = 127/457 (27%), Positives = 222/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 276 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 334
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 335 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 395 GRAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCE 508
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 509 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 568
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 569 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PRETFEGP-KH----EVL 619
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 620 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 367 (134.2 bits), Expect = 4.5e-65, Sum P(2) = 4.5e-65
Identities = 82/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II+
Sbjct: 114 VAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290
Score = 49 (22.3 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 614 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 665
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 383 (139.9 bits), Expect = 5.8e-65, Sum P(2) = 5.8e-65
Identities = 127/457 (27%), Positives = 222/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 276 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 334
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 335 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 395 GRAGRTASGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIRA--ASLDCE 508
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 509 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSSGA 568
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 569 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PRETFEGP-KH----EVL 619
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 620 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 678
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
Score = 367 (134.2 bits), Expect = 5.8e-65, Sum P(2) = 5.8e-65
Identities = 82/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II+
Sbjct: 114 VAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIIL 172
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290
Score = 49 (22.3 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 614 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 665
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 380 (138.8 bits), Expect = 6.0e-65, Sum P(2) = 6.0e-65
Identities = 125/456 (27%), Positives = 221/456 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 276 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 334
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 335 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
Query: 486 GRAGRTEPGRCYRLYSKSDF-ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDA 544
GRAGRT G+C+R+YSK + + P + PEI R L VL + L I DV F ++D
Sbjct: 395 GRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDP 454
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 455 PNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIRA--ASLDCED 509
Query: 605 LVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPRE 660
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 510 LLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAP 569
Query: 661 ERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLK 717
WC ++ ++ + L R + ++EL L+++ P P K+ + L+
Sbjct: 570 A--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PRETFEGP-KH----EVLR 620
Query: 718 EIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQ 777
+ + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 621 RCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 778 Y--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREM 715
Score = 370 (135.3 bits), Expect = 6.0e-65, Sum P(2) = 6.0e-65
Identities = 83/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +LS+ S II+
Sbjct: 114 VAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIIL 172
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290
Score = 49 (22.3 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 614 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 665
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 384 (140.2 bits), Expect = 7.6e-65, Sum P(2) = 7.6e-65
Identities = 127/457 (27%), Positives = 222/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 354 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 412
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 413 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 472
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 473 GRAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 531
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 532 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCE 586
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 587 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 646
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 647 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PRETFEGP-KH----EVL 697
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 698 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 756
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 757 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 793
Score = 367 (134.2 bits), Expect = 7.6e-65, Sum P(2) = 7.6e-65
Identities = 82/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 132 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 191
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II+
Sbjct: 192 VAQRVAEEMK-CALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 250
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 251 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 310
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 311 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 368
Score = 49 (22.3 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 692 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 743
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 382 (139.5 bits), Expect = 7.7e-65, Sum P(2) = 7.7e-65
Identities = 126/457 (27%), Positives = 221/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 276 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 334
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 335 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 394
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 395 GRAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 453
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 454 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCE 508
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 509 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 568
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 569 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PRETFEGP-KH----EVL 619
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +H +C L K W++F E+L
Sbjct: 620 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHQNCKLHEQETKLEWIIFHEVLVTTK 678
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 679 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 715
Score = 367 (134.2 bits), Expect = 7.7e-65, Sum P(2) = 7.7e-65
Identities = 82/238 (34%), Positives = 130/238 (54%)
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAIS 225
PI R+ +++ + L++ G TG GK+TQL ++L ++G + I TQPRK+AAIS
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 226 LAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIV 285
+AQRV EE + C V F ++ + YMTD CLL+H + D +L++ S II+
Sbjct: 114 VAQRVAEEMK-CALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 286 DEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
DEAHER+ R+ L++V+MSAT + +LS +F +C I + G
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACE 398
R +PV ++ +Y+ +V++ ++H E G IL FLT + E+E +CE
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCE 290
Score = 38 (18.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ L + E K+
Sbjct: 614 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLHEQETKL 665
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 665 (239.2 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 194/648 (29%), Positives = 321/648 (49%)
Query: 160 RLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ--SIVCTQ 217
++ + LP+Y ++++I+ I + VLIGETG GKSTQ+ QF+ + ++ SI TQ
Sbjct: 76 KMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQ 135
Query: 218 PRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 277
PR++AAI+LA RV +E GC + V F + +++ Y+TD LL+ M + DL
Sbjct: 136 PRRVAAINLATRVAQE-HGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDL 194
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCR-RFDLRLVIMSATADAHQLSKYFYDCGIS 336
S I++DEAHER+ R DLR+++MSAT A + S++F + I
Sbjct: 195 REYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPIL 254
Query: 337 HVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWA 396
V GR F V Y+ T V V+R +++ E+ G IL FL + E++ A
Sbjct: 255 FVEGRKFDVKQYYLKAPTD------DIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKA 308
Query: 397 C---EKF------DAPSAVALPF--HGQLSFDEQFCVFKSYPG-RRKVIFATNVAETSLT 444
EK +AP + +P+ + L +Q VF G +RKV+F+TN+AETS+T
Sbjct: 309 VTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVT 368
Query: 445 IPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSD 504
I GVKFV+DSG+ K + G+ L +SQ+SA QR+GRAGR G+ +RLY +SD
Sbjct: 369 ISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESD 428
Query: 505 FETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+ P EPEI R + VL + G+ D+ + + + P +AI M ++ L +LGA+
Sbjct: 429 YVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALD 488
Query: 565 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSD 624
++T+ G+ + L ++P L +++ +G V+ V + S
Sbjct: 489 TRG---KITKRGQQMALLPLQPHLSSVLIKA--SEVGCLSQVIDIVSCLSVENLLLNPSP 543
Query: 625 DEKIKADCLKVQFCH---RNGDLFTL---LSVY-----REWDSLPREERNKWCWENSVNA 673
+E+ + + ++ C+ R GDL L +Y + D+ ERN WC ++
Sbjct: 544 EERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDA--SSERNDWCKGLCISI 601
Query: 674 KSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEII---LSALAENVAM 730
+ + +L ++ + I S K E + + +I+ L+ +N A+
Sbjct: 602 RGFKNVIRVRDQLRVYCKRLFSSI--SEEDEESKKIGEDGELISKILKCFLTGFIKNTAI 659
Query: 731 FSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQY 778
G Y TG+ + +HPS S+L + +++ E + Y
Sbjct: 660 --GMPDRSYRTVSTGEPISIHPS-SMLFMNKSCPGIMYTEYVFTTKGY 704
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 647 (232.8 bits), Expect = 4.4e-64, Sum P(2) = 4.4e-64
Identities = 191/610 (31%), Positives = 309/610 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS------IVCTQP 218
LP+++ + D L + Q L+L+GETG GK+TQ+ QF+ D+ +A + CTQP
Sbjct: 65 LPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQP 124
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 277
R++AA+S+++RV +E ++ + Y F + + Y+TD LL+ M D L
Sbjct: 125 RRVAAMSVSRRVADEMDVSIGEE--VGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLL 182
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
R II+DEAHER+ R DL+LV+MSAT +A + +YF +
Sbjct: 183 ERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 338 VVGRNFPVDVRYV--PCATAGTSAVASYVS-DVVRMVGE--VHTTEKEGTILAFLTSKME 392
V GR PV++ Y P +A+ + V + G+ V T +E A E
Sbjct: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 302
Query: 393 VEWACEKFDAPSAVAL-----PFHGQLSFDEQ-FCVFKSYPGRRKVIFATNVAETSLTIP 446
V ++ V L P Q FD + + P RK++ +TN+AETSLTI
Sbjct: 303 VSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTID 362
Query: 447 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 506
G+ +VID G K+ + P + L V +S++SA+QR+GRAGRT PG+C+RLY++ F
Sbjct: 363 GIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFN 422
Query: 507 TRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
Q PEI R +L VL + LGI D+ FDF+D P+ + + A+ L LGA+
Sbjct: 423 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD- 481
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
+ G LT+ G+ + + ++P++ K+++ E L ++A+++ + C V +
Sbjct: 482 DEG--NLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN---CFVRPRE 536
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKE 685
+ AD K +F H +GD TLL+VY + E+ N WC+EN VN ++++ + ++
Sbjct: 537 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQ-NNEDPN-WCFENFVNNRAMKSADNVRQQ 594
Query: 686 LETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLG-YEVAM 743
L + + L + + N Y Y +++ +L+ VA ++ G Y
Sbjct: 595 LVRIMSRFNLKMCSTDF---NSRDY--YVN-IRKAMLAGYFMQVAHL---ERTGHYLTVK 645
Query: 744 TGQHVQLHPS 753
Q V LHPS
Sbjct: 646 DNQVVHLHPS 655
Score = 43 (20.2 bits), Expect = 4.4e-64, Sum P(2) = 4.4e-64
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 908 LFGAGAEIKHLELERRFLTV---DVYHSN-ANILDDK-ELLMFLE 947
L G ++ HLE +LTV V H + +N LD K E +++ E
Sbjct: 625 LAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNE 669
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 435 (158.2 bits), Expect = 5.4e-64, Sum P(2) = 5.4e-64
Identities = 119/394 (30%), Positives = 202/394 (51%)
Query: 408 LPFHGQLSFDEQFCVFKSYPGR---RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEP 464
LP + LS ++Q VF+S RK+I +TN+AETS+TI GV +V+D G VK ++
Sbjct: 334 LPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDS 393
Query: 465 GTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGI 523
+G+ L + S+SSANQRAGRAGR+ G+CYRLY++ +E +Q PEI R +L
Sbjct: 394 ESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTN 453
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEE-GKFLVKL 582
+L++ ALGI ++ FDFI P + ++ + L LGA+ +NG +LT G + +
Sbjct: 454 TILQLKALGIDNILNFDFISQPPSSSLIRGLEVLYGLGALD-DNG--KLTNPTGMIMAEF 510
Query: 583 GIEPRLGKLILSCFRRRLG-REGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN 641
+P K+I+ + + M N +F + + K + L +
Sbjct: 511 PTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFT---NQNHKSRKHLLV-----KE 562
Query: 642 GDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSY 701
GD TLL+++ + S + +WC ++ +N K+++R K+L K+ +I + S
Sbjct: 563 GDHLTLLNIFNSFIS--NQSSPQWCNQHQINYKAMQRVLQVRKQL-LAYAKKYSINVISC 619
Query: 702 WLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQ 761
+ N ++ + +++ I+S N A D Y+ + LHP+ S+L
Sbjct: 620 FDSNNNR-EQCSNLIRKAIVSGFFTNAAQLQP-DG-SYQTIREKHKLWLHPT-SVLCLSN 675
Query: 762 KPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
P WV+F E+ +Y+ VT+ + + L + P
Sbjct: 676 SPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAP 709
Score = 299 (110.3 bits), Expect = 5.4e-64, Sum P(2) = 5.4e-64
Identities = 85/271 (31%), Positives = 136/271 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA-AEQSIVCTQPRKIAA 223
LPIY R+ IL + LV+IG TGCGKSTQ+ Q+L +SG + ++I+CTQPR++AA
Sbjct: 55 LPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVAA 114
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
ISLA+RV +E + +V F ++++ Y+TD L++ M D L + S
Sbjct: 115 ISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYSV 174
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFD----------LRLVIMSATADAHQLSKYF-Y 331
I++DEAHERS +R L+L+I SAT +A+ +F Y
Sbjct: 175 IMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFFNY 234
Query: 332 DC--GISHVVGRNFPVDVRYVPCATAGTS-AVASYVSDVVRMVGEVHTTEKEGTILAFLT 388
+ S ++ R P + ++Y+ ++ + ++HTT+ G IL FLT
Sbjct: 235 NQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLT 294
Query: 389 SKMEVEWACEKFDAPSAVALPFHGQLSFDEQ 419
+ E+E + D + +H Q +Q
Sbjct: 295 GQEEIEKLIQTLDDKFEILRQYHQQHHHQQQ 325
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 677 (243.4 bits), Expect = 1.7e-63, P = 1.7e-63
Identities = 238/806 (29%), Positives = 393/806 (48%)
Query: 15 LN-LKLIPHVVVPSDADELEERLR-NLFVDHVKGLMEGELVNKWLKMKDDKCDEIANVSN 72
LN + + HV +P + ++ L+ + ++G+ G VN +KD E+A+++
Sbjct: 238 LNRIPITSHVFIPPFLENSKQYLQLQISGSSIRGI--GPTVNP---VKDPT-SELASMAK 291
Query: 73 RLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNG-MHCVLKYLDDPQNVAKKESYD 131
+ GS F N R K +ER + + +N + ++ + + + K+E +
Sbjct: 292 Q-GS------FVVQNRRSK---RERALQAKEAAGVENSNIGSIIDTANTTEEI-KQEEKN 340
Query: 132 ANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETG 191
A+V+ + +D Q+ S + AF VR D L R + + + GE G
Sbjct: 341 ADVNETKHQDIQQQRKS-LPAFAVRN-----DLLTTI--RDNQVTIVIGET-----GSGK 387
Query: 192 CGKSTQLVQ---FLADSGIAAEQSIV-CTQPRKIAAISLAQRVREESRGCYEDDSVICYP 247
+ TQ + F A+ E+ I+ CTQPR++AA+S+A+RV EE C + V
Sbjct: 388 TTQLTQFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMN-CKLGEEVGYSI 446
Query: 248 SFSSAQHFDSKVI-YMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXX 306
F VI YMT+ LL+ + D L+ SCII+DEAHERS
Sbjct: 447 RFEDKTDNKKTVIKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLL 506
Query: 307 CRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSD 366
+R DL+L++ SAT +A++ +K+F H+ GR FPV+V + V V
Sbjct: 507 AKRKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFN--RDVNMDYVEMAVKQ 564
Query: 367 VVRM-VGEVHTTEK---EGTILAFLTSKMEVEWAC----EKF----DAPSAVALPFHGQL 414
V+ + +G + +G IL F+T + ++E C EK D P P + +
Sbjct: 565 VLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTM 624
Query: 415 SFDEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRV 473
D Q +F K+ RRKV+ ATN+AETSLT+ G+K+VID G+VK + P GM+ L+V
Sbjct: 625 PQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQV 684
Query: 474 CRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEP--EIHRVHLGIAVLRILAL 531
+S ++A+QR+GRAGRT G YRLY++ E + +P EI R +L +L + +L
Sbjct: 685 VPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSL 744
Query: 532 GIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL 591
+ D+ F F+D P + ++ +L +GA+ N G ELT+ G + + IEP L KL
Sbjct: 745 KVNDINSFPFLDPPPKDLLNCSLYDLWAIGALD-NLG--ELTKLGHSMTQFPIEPTLAKL 801
Query: 592 ILSCFRRRLG-REGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSV 650
IL + E +V M + +IF R + +AD + +F D TLL+V
Sbjct: 802 ILLSTQPEFHCSEEVVTIVAMLSVPNIFNR--PKERANEADMAREKFIISESDHLTLLNV 859
Query: 651 YREWD-SLPR-----EERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLW 704
+ +W+ +L + + N WC +N + KSL R +D +L ++K I+ S
Sbjct: 860 FNQWNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSK--- 916
Query: 705 NPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQH----VQLHPSCSLLIFG 760
T+ D +++ + ++ + A + + G + +H + LHP+ SLL
Sbjct: 917 -----TDDD--IRKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSN 969
Query: 761 QKPTWVVFGELLSVNNQYLVCVTAFD 786
+V++ EL+ +Y+ CVT D
Sbjct: 970 LSTNYVIYHELVLTKKEYMNCVTTVD 995
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 653 (234.9 bits), Expect = 4.5e-63, P = 4.5e-63
Identities = 157/427 (36%), Positives = 235/427 (55%)
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
S++ ++VDEAHER+ R +L++++ SAT D + S +F D +
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 90
Query: 338 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 397
+ GR FPVD+ Y A Y+ V V ++H T+ G IL FLT + E+E AC
Sbjct: 91 IPGRRFPVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAAC 144
Query: 398 EKFD---------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPG 447
E + LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G
Sbjct: 145 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 204
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+ +V+D G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++
Sbjct: 205 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ- 263
Query: 508 RPLNQE--PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
L + PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+
Sbjct: 264 HELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL-- 321
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
N + ELT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D
Sbjct: 322 -NHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKD 378
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKE 685
+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D ++
Sbjct: 379 KVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQ 436
Query: 686 LETCLEK 692
LE LE+
Sbjct: 437 LEGLLER 443
Score = 152 (58.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 46/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 378 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 435
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 436 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 483
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F Q+P W+++ EL+ +++ V + L + P
Sbjct: 484 QQTVFIHPNSSL--FEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 532
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 634 (228.2 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 190/610 (31%), Positives = 309/610 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS------IVCTQP 218
LP+++ +++ L+ + Q L+L+GETG GK+TQ+ QF+ D+ A + CTQP
Sbjct: 61 LPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQP 120
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDL 277
R++AA+S+++RV EE ++ + Y F + + Y+TD LL+ M D L
Sbjct: 121 RRVAAMSVSRRVAEEMDVTIGEE--VGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLL 178
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
R II+DEAHER+ R DL+LV+MSAT +A + YF +
Sbjct: 179 ERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMK 238
Query: 338 VVGRNFPVDVRYV--PCATAGTSAVASYVS-DVVRMVGE--VHTTEKEGTILAFLTSKME 392
V GR PV++ Y P +A+ + V + G+ V T +E A E
Sbjct: 239 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 298
Query: 393 VEWACEKFDAPSAVAL-----PFHGQLSFDEQ-FCVFKSYPGRRKVIFATNVAETSLTIP 446
V ++ V L P Q FD V + P RK++ +TN+AETSLTI
Sbjct: 299 VGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTID 358
Query: 447 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 506
G+ +VID G K+ + P + L V +S++SA+QR+GRAGRT PG+C+RLY++ F
Sbjct: 359 GIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFN 418
Query: 507 TRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
Q PEI R +L VL + LGI D+ FDF+D P+ + + A+ L LGA+
Sbjct: 419 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD- 477
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
++G LT+ G+ + + ++P++ K+++ E L ++A+++ + C + +
Sbjct: 478 DDG--NLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPN---CFIRPRE 532
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKE 685
+ AD K +F H GD TLL+VY + E+ N WC+EN +N ++++ + ++
Sbjct: 533 AQKAADEAKARFGHIEGDHLTLLNVYHAFKQ-NNEDPN-WCYENFINNRAMKSADNVRQQ 590
Query: 686 LETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLG-YEVAM 743
L + + L + + N Y Y +++ +L+ VA ++ G Y
Sbjct: 591 LVRIMSRFNLKMCSTDF---NSRDY--YIN-IRKAMLAGYFMQVAHL---ERTGHYLTVK 641
Query: 744 TGQHVQLHPS 753
Q V LHPS
Sbjct: 642 DNQVVHLHPS 651
Score = 43 (20.2 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 908 LFGAGAEIKHLELERRFLTV---DVYHSN-ANILDDK-ELLMFLE 947
L G ++ HLE +LTV V H + +N LD K E +++ E
Sbjct: 621 LAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNE 665
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 646 (232.5 bits), Expect = 2.5e-62, P = 2.5e-62
Identities = 156/427 (36%), Positives = 234/427 (54%)
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
S++ ++VDEAHER+ R +L++++ SAT D + S +F +
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFR 90
Query: 338 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 397
+ GR FPVD+ Y A Y+ V V ++H T+ G IL FLT + E+E AC
Sbjct: 91 IPGRRFPVDIFYTKAPEA------DYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAAC 144
Query: 398 EKFD---------APSAVALPFHGQLSFDEQFCVFK-SYPGRRKVIFATNVAETSLTIPG 447
E + LP + L D Q +F+ + PG RKV+ ATN+AETSLTI G
Sbjct: 145 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 204
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+ +V+D G K+ + P TGM L V S++SANQRAGRAGR G+C+RLY+ ++
Sbjct: 205 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ- 263
Query: 508 RPLNQE--PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKL 565
L + PEI R LG VL + +LGI D+ FDF+D P + + +A+ L LGA+
Sbjct: 264 HELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL-- 321
Query: 566 NNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
N + ELT G+ + +L ++P L K+IL+ + E L +AA+++ +SIF R D
Sbjct: 322 -NHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYR--PKD 378
Query: 626 EKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKE 685
+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D ++
Sbjct: 379 KVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVREQ 436
Query: 686 LETCLEK 692
LE LE+
Sbjct: 437 LEGLLER 443
Score = 152 (58.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 46/171 (26%), Positives = 84/171 (49%)
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
D+ + AD +V F GD LL+VY +W ++WC+EN V +S+RR +D +
Sbjct: 378 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYS--SQWCYENFVQFRSMRRARDVRE 435
Query: 685 ELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMT 744
+LE LE+ + + + S +Y + +++ I + + A + + GY
Sbjct: 436 QLEGLLER-VEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQ 483
Query: 745 GQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
Q V +HP+ SL F Q+P W+++ EL+ +++ V + L + P
Sbjct: 484 QQTVFIHPNSSL--FEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 532
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 644 (231.8 bits), Expect = 4.2e-62, P = 4.2e-62
Identities = 178/544 (32%), Positives = 281/544 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI YR +L + QI +++G TGCGK+TQ+ QFL ++G A++ I+ CTQPR++ A
Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
S+++RV E S+ Y F +K+ YMTD LL D L R S
Sbjct: 85 KSVSERVSLELNS--PPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSI 142
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF-YD--CGISHVV 339
+I+DE HER+ +R D RLV+ SA+ DA++LS++F D C +S +
Sbjct: 143 VILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMS-IE 201
Query: 340 GRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 399
G+ FPV+ ++ T +YV + V +++T G IL FL+ + E+E+ +K
Sbjct: 202 GKLFPVETLFLQKPTE------NYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKK 255
Query: 400 F---------DAPSAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTIPGVK 449
D + V LP H L+ DEQ VF Y G RKVIF+TN+AETS+TI G+
Sbjct: 256 IEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIV 315
Query: 450 FVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRP 509
+V+DSG K+ + P T + L +S+SSA QR+GRAGRT G+ +RLY++ +
Sbjct: 316 YVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMK 375
Query: 510 LNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGV 569
E +I + VL + LG++++ F F P + A+ +L LG + +G
Sbjct: 376 EEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLD-ESG- 433
Query: 570 FELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKI 628
LT+ G + ++ + K +L+ + E L +A+++ A +F S K
Sbjct: 434 -NLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILT-AGEVFYNPTSSS-KN 490
Query: 629 KADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELET 688
A F GD+ T L+V+ + + ++ +WC +N +N ++LR+ D L
Sbjct: 491 DAFVAHSSFFANEGDIITALNVFESF--VGNKKDLQWCRKNYLNYQTLRQALDIRTHLVR 548
Query: 689 CLEK 692
L K
Sbjct: 549 FLNK 552
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 637 (229.3 bits), Expect = 2.4e-61, P = 2.4e-61
Identities = 194/608 (31%), Positives = 298/608 (49%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 98 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 157
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 158 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNET 217
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILA
Sbjct: 218 SDPTRDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILA 271
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+ LP + L EQ VF+ RKVI
Sbjct: 272 FLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 331
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGRAGR+
Sbjct: 332 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRS 391
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 392 GKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 451
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 452 LELLYALGGLDKD---CRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 507
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
+IF G+ +K +A + +F GD T+L+VY + + + ++WC E+ +N
Sbjct: 508 QIQNIFVVPGN--QKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQEHFLN 563
Query: 673 AKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFS 732
K L R T++E +L ++ + + + D L+ I+S N A F
Sbjct: 564 YKGLIRAA-TVRE-------QLKKLLVKFQVPKKSSEGDPDPVLR-CIVSGFFANAARFH 614
Query: 733 GYDQLGYEVAMTGQHVQLH-----PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDF 787
+A +G+ Q+H P +G + V++ E++ + Y+ VTA +
Sbjct: 615 STGAYSRTLAHSGREAQVHLFTVVPGTQSRYWGFR---VIYNEVIQTSKYYMRDVTAIES 671
Query: 788 DSLSTLCP 795
L L P
Sbjct: 672 AWLLELAP 679
Score = 365 (133.5 bits), Expect = 6.7e-30, P = 6.7e-30
Identities = 92/242 (38%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL + Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 46 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 105
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV EE RG V C +++ ++TD L++ M D L++ S
Sbjct: 106 VTVAGRVAEE-RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSA 164
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 165 IMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDT 224
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + E
Sbjct: 225 CVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 278
Query: 393 VE 394
VE
Sbjct: 279 VE 280
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 618 (222.6 bits), Expect = 1.0e-60, Sum P(2) = 1.0e-60
Identities = 171/500 (34%), Positives = 256/500 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G +LA
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVVKIHQTEGDGDVLA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+A LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGR GR+
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
+IF V ++K A + +F GD T+L++Y + + + +KWC E+ +N
Sbjct: 516 QIQNIF--VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF--IKHNKDSKWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R ++L+ L K
Sbjct: 572 YKGLVRAATVREQLKKLLVK 591
Score = 367 (134.2 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 92/242 (38%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL I Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV EE RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVAEE-RGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G +LAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 41 (19.5 bits), Expect = 1.0e-60, Sum P(2) = 1.0e-60
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 766 VVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
V++ E++ + Y+ VTA + L L P
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAP 658
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 609 (219.4 bits), Expect = 9.7e-60, Sum P(2) = 9.7e-60
Identities = 170/500 (34%), Positives = 254/500 (50%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV +E + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S +++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNET 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILA
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKATVDTVVKIHQTEGDGDILA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+A LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G +K + P T + L V VSQ+SANQRAGR GR
Sbjct: 340 VATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ FE P + PE+ R +L VL++ ALGI V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
++F V ++K +A + +F GD T+L+VY + + + ++WC E+ +N
Sbjct: 516 QIQNVF--VFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF--IKHNKSSQWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R +L+ L K
Sbjct: 572 YKGLVRAATVRDQLKKLLVK 591
Score = 357 (130.7 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 90/242 (37%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL + Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV +E RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVADE-RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
+++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 VMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 41 (19.5 bits), Expect = 9.7e-60, Sum P(2) = 9.7e-60
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 766 VVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
V++ E++ + Y+ VTA + L L P
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAP 658
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 621 (223.7 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 172/500 (34%), Positives = 257/500 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDT 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILA
Sbjct: 226 SDPPRDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+ LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGRAGR+
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
+IF V ++K +A + +F GD T+L+VY + + + ++WC E+ +N
Sbjct: 516 QIQNIF--VVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R ++L+ L K
Sbjct: 572 YKGLVRAATVREQLKKLLVK 591
Score = 368 (134.6 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 93/242 (38%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL I Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV EE RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVAEE-RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSA 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 136 (52.9 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 49/188 (26%), Positives = 86/188 (45%)
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWE 668
A M +IF V ++K +A + +F GD T+L+VY + + + ++WC E
Sbjct: 512 AAMMQIQNIF--VVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQE 567
Query: 669 NSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKW-LKEIILSALAEN 727
+ +N K L R T++E +L ++ + + P K +E D + I+S N
Sbjct: 568 HFLNYKGLVRAA-TVRE-------QLKKLLVKFQV--PKKSSEGDPDPVLRCIVSGFFAN 617
Query: 728 VAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDF 787
A F Y + +HP+ S+L + P WV++ E++ + Y+ VTA +
Sbjct: 618 AARFHSTGV--YRTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674
Query: 788 DSLSTLCP 795
L L P
Sbjct: 675 AWLLELAP 682
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 618 (222.6 bits), Expect = 2.6e-59, P = 2.6e-59
Identities = 171/500 (34%), Positives = 256/500 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G +LA
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVVKIHQTEGDGDVLA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+A LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGR GR+
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
+IF V ++K A + +F GD T+L++Y + + + +KWC E+ +N
Sbjct: 516 QIQNIF--VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF--IKHNKDSKWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R ++L+ L K
Sbjct: 572 YKGLVRAATVREQLKKLLVK 591
Score = 367 (134.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 92/242 (38%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL I Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV EE RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVAEE-RGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G +LAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 141 (54.7 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWE 668
A M +IF V ++K A + +F GD T+L++Y + + + +KWC E
Sbjct: 512 AAMMQIQNIF--VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF--IKHNKDSKWCQE 567
Query: 669 NSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLK-EIILSALAEN 727
+ +N K L R T++E +L ++ + + P K +E D L I+S N
Sbjct: 568 HFLNYKGLVRAA-TVRE-------QLKKLLVKFQV--PRKSSEGDPDLVLRCIVSGFFAN 617
Query: 728 VAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDF 787
A F + Y + +HP+ S+L + P WV++ E++ + Y+ VTA +
Sbjct: 618 AARF--HSTGAYRTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674
Query: 788 DSLSTLCP 795
L L P
Sbjct: 675 AWLLELAP 682
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 618 (222.6 bits), Expect = 2.6e-59, P = 2.6e-59
Identities = 171/500 (34%), Positives = 256/500 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 75 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 134
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 135 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 194
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G +LA
Sbjct: 195 SDPARDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVVKIHQTEGDGDVLA 248
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+A LP + L EQ VF+ RKVI
Sbjct: 249 FLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 308
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGR GR+
Sbjct: 309 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRS 368
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 369 GKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 428
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 429 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 484
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
+IF V ++K A + +F GD T+L++Y + + + +KWC E+ +N
Sbjct: 485 QIQNIF--VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF--IKHNKDSKWCQEHFLN 540
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R ++L+ L K
Sbjct: 541 YKGLVRAATVREQLKKLLVK 560
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/188 (26%), Positives = 86/188 (45%)
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWE 668
A M +IF V ++K A + +F GD T+L++Y + + + +KWC E
Sbjct: 481 AAMMQIQNIF--VVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF--IKHNKDSKWCQE 536
Query: 669 NSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLK-EIILSALAEN 727
+ +N K L R T++E +L ++ + + P K +E D L I+S N
Sbjct: 537 HFLNYKGLVRAA-TVRE-------QLKKLLVKFQV--PRKSSEGDPDLVLRCIVSGFFAN 586
Query: 728 VAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDF 787
A F + Y + +HP+ S+L + P WV++ E++ + Y+ VTA +
Sbjct: 587 AARF--HSTGAYRTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 643
Query: 788 DSLSTLCP 795
L L P
Sbjct: 644 AWLLELAP 651
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 461 (167.3 bits), Expect = 6.9e-59, Sum P(3) = 6.9e-59
Identities = 141/474 (29%), Positives = 226/474 (47%)
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKMEV 393
+ H+ GR FPV Y P V +V ++++ ++H E G IL FLT + V
Sbjct: 362 VCHIKGRQFPVKTIYSP------EPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETV 415
Query: 394 EWACEKF----------DAPSAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETS 442
E A E P LP L Q VF P R RK+I ATN+AETS
Sbjct: 416 E-ALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETS 474
Query: 443 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 502
+T+ GV++V+D G K F G++ L V +S+S+A QR GRAGR PG+CYRLY++
Sbjct: 475 VTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTE 534
Query: 503 SDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGA 562
D+ PEI R L A+L + A G+ +V F F+ P +A+E A+ L+ + A
Sbjct: 535 KDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEA 594
Query: 563 IKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGL--VLAAVMA-NASSIFC 619
+ G +++E G + KL + P LG+++L+ G + L V+ + + +IF
Sbjct: 595 LD-ETG--KISETGSHIAKLPLTPTLGRVLLAA--SDFGPDCLTDVIDIISCLSVENIFL 649
Query: 620 RVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRC 679
S+++K A+ + R GD T+L+ R + S +R W + V+ ++++
Sbjct: 650 NTTSEEKKEAAEAARRDLYRREGDHLTMLATVRAYAS-ENTDRKAWAERHLVSHRAMQSV 708
Query: 680 QDTIKELET-CLEKELAIIIPSYWLWNPHKYTEYDK----WLKEIILSALAENVAMFSGY 734
D K+L C + +L +PS + + ++ + L A N A
Sbjct: 709 MDVRKQLTAQCRQAKL---LPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARL--V 763
Query: 735 DQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFD 788
Y + Q V +HPS ++FG+K +++ E + N Y V+A D
Sbjct: 764 PDGSYRTVVGNQTVAIHPSS--VLFGKKVEAILYNEFVFTNRSYARGVSAVQMD 815
Score = 157 (60.3 bits), Expect = 6.9e-59, Sum P(3) = 6.9e-59
Identities = 51/159 (32%), Positives = 78/159 (49%)
Query: 186 LIGETGCGKS-TQLVQFLADSGIAAEQS-IVCTQPRKIAAISLAQRVREESR---GCYED 240
L+ E+ C + T +VQ A I TQPR++AAISLA+RV EE G
Sbjct: 184 LVDESWCRPTKTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSP 243
Query: 241 DSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXX 299
S + Y F ++ ++V ++T+ LLQ ++D L++ S I+VDE HER
Sbjct: 244 ASKVGYSVRFDTSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVM 303
Query: 300 XXXXXXXCRRFD------LRLVIMSATADAHQLSKYFYD 332
+ + L+ V+MSATAD L ++F +
Sbjct: 304 GFLRNLVSGKREGRGGVPLKAVVMSATADMESLQEFFVE 342
Score = 116 (45.9 bits), Expect = 6.9e-59, Sum P(3) = 6.9e-59
Identities = 54/191 (28%), Positives = 87/191 (45%)
Query: 32 LEERLRNLFVDH-VKGLME-GELVNKWLKMKDDK----CDEIANVS--NRLGSRNSYAVF 83
+ ER+R +FVD ++E G+ + K + D NVS N+ R+ A
Sbjct: 1 MPERVRTVFVDEDAAPIVEQGKPLKSNKKPSPETGERPSDNKENVSKKNKKRKRDQLADE 60
Query: 84 CELNERKKGLFKEREMIM------RRVREFKN--GMHCVLKYL--DDPQNVAKKESYDAN 133
L+ KK E + R+ E N G + K L D P+N K +
Sbjct: 61 TRLHRTKKSNTSESQAAAVEQNENRKEDEAVNNSGEATIAKSLPKDQPENQKHKRKKHSR 120
Query: 134 VDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCG 193
F+ E+ R + +A ++ E ++ LPI+ + +I + + +++LIGETG G
Sbjct: 121 P--FKDEENGRTASLKKKAQMLYEIRK---NLPIFAHGDEIRQHLRKNDVMLLIGETGSG 175
Query: 194 KSTQLVQFLAD 204
KSTQ+ QFL D
Sbjct: 176 KSTQIPQFLVD 186
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 613 (220.8 bits), Expect = 9.1e-59, P = 9.1e-59
Identities = 170/500 (34%), Positives = 255/500 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDT 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILA
Sbjct: 226 SDPTRDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+ LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGR GR+
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P + PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
++F V ++K +A +F GD T+L+VY + + + ++WC E+ +N
Sbjct: 516 QIQNVF--VVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R ++L+ L K
Sbjct: 572 YKGLVRAATVREQLKKLLVK 591
Score = 368 (134.6 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 94/242 (38%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL I Q +V+IGETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV EE RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVAEE-RGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSA 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 136 (52.9 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWE 668
A M ++F V ++K +A +F GD T+L+VY + + + ++WC E
Sbjct: 512 AAMMQIQNVF--VVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQE 567
Query: 669 NSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKW-LKEIILSALAEN 727
+ +N K L R T++E +L ++ + + P K +E D + I+S N
Sbjct: 568 HFLNYKGLVRAA-TVRE-------QLKKLLVKFQV--PKKSSEGDPDPVLRCIVSGFFAN 617
Query: 728 VAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDF 787
A F + Y + +HP+ S+L + P WV++ E++ + Y+ VTA +
Sbjct: 618 AARF--HSTGAYRTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674
Query: 788 DSLSTLCP 795
L L P
Sbjct: 675 AWLLELAP 682
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 613 (220.8 bits), Expect = 9.1e-59, P = 9.1e-59
Identities = 172/500 (34%), Positives = 256/500 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV EE + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNET 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILA
Sbjct: 226 SDPTRDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+ LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VSQ+SANQRAGRAGR+
Sbjct: 340 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ F+ P PE+ R +L +L++ ALGI +V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
+IF G+ +K +A + +F GD T+L+VY + + + ++WC E+ +N
Sbjct: 516 QIQNIFVVPGN--QKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R ++L+ L K
Sbjct: 572 YKGLIRAATVREQLKKLLVK 591
Score = 365 (133.5 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 92/242 (38%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL + Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV EE RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVAEE-RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSA 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
I++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 101 (40.6 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 629 KADCLKV--QFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
K+ ++V +F GD T+L+VY + + + ++WC E+ +N K L R T++E
Sbjct: 528 KSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNKNSQWCQEHFLNYKGLIRAA-TVRE- 583
Query: 687 ETCLEKELAIIIPSYWLWNPHKYTEYDKW-LKEIILSALAENVAMFSGYDQLGYEVAMTG 745
+L ++ + + P K +E D + I+S N A F + Y V ++
Sbjct: 584 ------QLKKLLVKFQV--PKKSSEGDPDPVLRCIVSGFFANAARF--HSTGAYSVILSP 633
Query: 746 QHVQLHPSCSLLIFGQKPTW-VVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
+ L+ L +F +K V++ E++ + Y+ VTA + L L P
Sbjct: 634 HSLYLY---YLTLFNRKFLQKVIYNEVIQTSKYYMRDVTAIESAWLLELAP 681
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 611 (220.1 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 172/502 (34%), Positives = 258/502 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGC--YEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 273
TQPR++AA S+A RV EE +E I + S H +++ ++TD L++ M+
Sbjct: 96 TQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDP-HA-TRIKFLTDGMLVREMMS 153
Query: 274 DRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY-- 331
D L + S +I+DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 154 DPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLN 213
Query: 332 ---D-----CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTI 383
D CGI V GR FPVD+ Y S V YV V V ++H TE +G +
Sbjct: 214 ESGDASKDTCGILTVEGRTFPVDIFYT------VSPVPDYVKATVETVLKIHETEDDGDV 267
Query: 384 LAFLTSKMEVEWACEKFDAPSAV-----------ALPFHGQLSFDEQFCVFKSY-PGRRK 431
LAFLT + EVE + LP + L ++EQ VF+ P RK
Sbjct: 268 LAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRK 327
Query: 432 VIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRT 491
V+ ATN+AETS+TI GV FVID VK + P T + L V +S++SA QRAGRAGR
Sbjct: 328 VVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRN 387
Query: 492 EPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIE 551
G+C+RLY++ DFE P + PE+ R +L +L++ ALGI +V F F+ P A+++
Sbjct: 388 RAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMV 447
Query: 552 MAIRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAV 610
A+ L LG + G LT+ G + + + P K++L +E + +AA+
Sbjct: 448 QALELLFALGGLD-QYG--RLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAM 504
Query: 611 MANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENS 670
M +IF V +++ A +F GD T+L+VY + + ++ ++WC ++
Sbjct: 505 M-QIQNIF--VAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAF--IKHQKSSQWCQDHF 559
Query: 671 VNAKSLRRCQDTIKELETCLEK 692
+N K L R ++L L K
Sbjct: 560 LNYKGLLRATAVREQLRHLLNK 581
Score = 371 (135.7 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 100/276 (36%), Positives = 143/276 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ +R +IL + Q +V++GETG GKSTQ+ Q+L ++G AAE ++ TQPR++AA
Sbjct: 44 LPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAA 103
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQH-FDSKVIYMTDHCLLQHFMNDRDLSRISC 282
S+A RV EE RG + V F +++ ++TD L++ M+D L + S
Sbjct: 104 TSVATRVAEE-RGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSV 162
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY-----D----- 332
+I+DEAHER+ +R DLRL++ SAT DA + +F D
Sbjct: 163 LILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESGDASKDT 222
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
CGI V GR FPVD+ Y S V YV V V ++H TE +G +LAFLT + E
Sbjct: 223 CGILTVEGRTFPVDIFYT------VSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEE 276
Query: 393 VEWACEKFDAPSAVALPFHGQLSFDEQFCVFKSYPG 428
VE A L +G + CV Y G
Sbjct: 277 VEKVVSLLQE-QARTLSRYGM---KKHLCVLPMYAG 308
Score = 134 (52.2 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 60/251 (23%), Positives = 113/251 (45%)
Query: 555 RNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILS-CFRRRLGREG-------LV 606
+++VQ A++L + L + G+ +G+ R+ + LS F + L G +V
Sbjct: 444 QSMVQ--ALELLFALGGLDQYGRLTDPMGV--RMAEFPLSPMFAKMLLESGNFGCSKEIV 499
Query: 607 LAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWC 666
A M +IF V +++ A +F GD T+L+VY + + ++ ++WC
Sbjct: 500 TIAAMMQIQNIF--VAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAF--IKHQKSSQWC 555
Query: 667 WENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDK-WLKEIILSALA 725
++ +N K L R T + ++L ++ + + P +E D + I+S
Sbjct: 556 QDHFLNYKGLLRA--------TAVREQLRHLLNKFKV--PRTSSEGDPDVILRCIVSGFF 605
Query: 726 ENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPT-WVVFGELLSVNNQYLVCVTA 784
N A + Y + + +HP +++G+KP WVVF E++ + Y+ VTA
Sbjct: 606 ANAARM--HHSGSYRTLRDDRELYIHPDS--VLYGEKPPKWVVFNEVVQTSKYYMRDVTA 661
Query: 785 FDFDSLSTLCP 795
+ L L P
Sbjct: 662 VESSWLVELAP 672
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 609 (219.4 bits), Expect = 2.4e-58, P = 2.4e-58
Identities = 170/500 (34%), Positives = 254/500 (50%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+++A RV +E + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD--- 332
L++ S +++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 166 LLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNET 225
Query: 333 -------CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILA
Sbjct: 226 SDPARDTCVILTVEGRTFPVDIFYLQ------SPVPDYIKATVDTVVKIHQTEGDGDILA 279
Query: 386 FLTSKMEVEWACEKF-DAPSAVA----------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE + A+A LP + L EQ VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G +K + P T + L V VSQ+SANQRAGR GR
Sbjct: 340 VATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRS 399
Query: 494 GRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMA 553
G+CYRLY++ FE P + PE+ R +L VL++ ALGI V F F+ P A+++ A
Sbjct: 400 GKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQA 459
Query: 554 IRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
+ L LG + + LTE G + + + P K++L +E L +AA+M
Sbjct: 460 LELLYALGGLDKD---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMM- 515
Query: 613 NASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVN 672
++F V ++K +A + +F GD T+L+VY + + + ++WC E+ +N
Sbjct: 516 QIQNVF--VFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF--IKHNKSSQWCQEHFLN 571
Query: 673 AKSLRRCQDTIKELETCLEK 692
K L R +L+ L K
Sbjct: 572 YKGLVRAATVRDQLKKLLVK 591
Score = 357 (130.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 90/242 (37%), Positives = 132/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL + Q +V++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+++A RV +E RG V C +++ ++TD L++ M D L++ S
Sbjct: 114 VTVAGRVADE-RGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD---------- 332
+++DEAHER+ +R DLRL++ SAT DA + +F
Sbjct: 173 VMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDT 232
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
C I V GR FPVD+ Y+ S V Y+ V V ++H TE +G ILAFLT + E
Sbjct: 233 CVILTVEGRTFPVDIFYLQ------SPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 132 (51.5 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWE 668
A M ++F V ++K +A + +F GD T+L+VY + + + ++WC E
Sbjct: 512 AAMMQIQNVF--VFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF--IKHNKSSQWCQE 567
Query: 669 NSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENV 728
+ +N K L R +L+ L K +P + D L+ I+S N
Sbjct: 568 HFLNYKGLVRAATVRDQLKKLLVK---FQVPKM-----SSEGDPDPVLR-CIVSGFFANA 618
Query: 729 AMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFD 788
A F + Y + +HP+ S+L + P WV++ E++ + Y+ VTA +
Sbjct: 619 ARF--HSTGAYRTIRDDHELHIHPA-SVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESA 675
Query: 789 SLSTLCP 795
L L P
Sbjct: 676 WLLELAP 682
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 606 (218.4 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 172/504 (34%), Positives = 259/504 (51%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPR++AA+S+A RV +E + C +++ ++TD L++ M D
Sbjct: 106 TQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADP 165
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY--DC 333
L+R S +++DEAHER+ +R DLRL++ SAT DA + +F D
Sbjct: 166 LLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDT 225
Query: 334 G--------ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILA 385
G I V GR FPVD+ Y+ S V Y+ V ++H E +G ILA
Sbjct: 226 GDPSKDTSVILTVEGRTFPVDIFYIQ------SPVPDYIKSTVETAMKIHQMENDGDILA 279
Query: 386 FLTSKMEVEWAC----EKFDAPSAVA-------LPFHGQLSFDEQFCVFKSYPGR-RKVI 433
FLT + EVE E+ A S LP + L +Q VF+ RKVI
Sbjct: 280 FLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVI 339
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATNVAETS+TI G+ +VID G VK + P T + L V VS++SANQRAGRAGR
Sbjct: 340 VATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRS 399
Query: 494 GRCYRLYS--KSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIE 551
G+CYRLY+ + DFE P + PE+ R +L +L++ ALGI +V F F+ P A+++
Sbjct: 400 GKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMV 459
Query: 552 MAIRNLVQLGAIKLNNGVFELTEE-GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAV 610
A+ L LG + ++ LTE G + + + P K++L +E L +AA+
Sbjct: 460 QALELLYALGGLDMH---CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAM 516
Query: 611 MANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENS 670
M +IF + ++K +A +F GD T+L+VY + + + ++WC E+
Sbjct: 517 M-QIQNIF--LIPPNQKSQAARQHRKFAVEEGDHLTMLNVYEAF--VKHSKSSQWCQEHF 571
Query: 671 VNAKSLRRC---QDTIKELETCLE 691
+N K L R ++ +K+L C +
Sbjct: 572 LNYKGLVRASVVREQLKKLLVCFK 595
Score = 360 (131.8 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 92/242 (38%), Positives = 131/242 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LP++ R IL + Q LV++GETGCGKSTQ+ Q+LA++G AE +V TQPR++AA
Sbjct: 54 LPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 224 ISLAQRVREESRGCYEDDSV-ICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+S+A RV +E RG V C +++ ++TD L++ M D L+R S
Sbjct: 114 VSVAGRVADE-RGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSV 172
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY--DCG------ 334
+++DEAHER+ +R DLRL++ SAT DA + +F D G
Sbjct: 173 LMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDT 232
Query: 335 --ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKME 392
I V GR FPVD+ Y+ S V Y+ V ++H E +G ILAFLT + E
Sbjct: 233 SVILTVEGRTFPVDIFYIQ------SPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEE 286
Query: 393 VE 394
VE
Sbjct: 287 VE 288
Score = 125 (49.1 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 49/192 (25%), Positives = 84/192 (43%)
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNK 664
++ A M +IF + ++K +A +F GD T+L+VY + + + ++
Sbjct: 510 ILTIAAMMQIQNIF--LIPPNQKSQAARQHRKFAVEEGDHLTMLNVYEAF--VKHSKSSQ 565
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKW-LKEIILSA 723
WC E+ +N K L R ++L K+L + P K +E D + I+S
Sbjct: 566 WCQEHFLNYKGLVRASVVREQL-----KKLLVCFKV-----PKKSSEGDPDPVLRCIVSG 615
Query: 724 LAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVT 783
N A F + Y + +HP+ S+L + P WVV+ E++ Y+ VT
Sbjct: 616 FFANAAKF--HSTGAYRTIRDDHELHIHPT-SVLYAEKPPRWVVYNEVIQTAKYYMRDVT 672
Query: 784 AFDFDSLSTLCP 795
A + L L P
Sbjct: 673 AIESAWLVELAP 684
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 628 (226.1 bits), Expect = 1.2e-57, P = 1.2e-57
Identities = 179/569 (31%), Positives = 283/569 (49%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIA 222
+GLPI I I Q++++ GETG GK+TQ+ + + G + I TQPR+IA
Sbjct: 97 EGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIA 156
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
A ++A R+ EE G + V F+ S + MTD LL DR L +
Sbjct: 157 ARTVANRIAEEL-GTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDT 215
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD-----CGISH 337
II+DEAHERS +R DL+L+I SAT D + +K+F I
Sbjct: 216 IIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIE 275
Query: 338 VVGRNFPVDVRYVPCATAG-------TSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSK 390
V GR FPV++RY P + +S ++ V E+ G IL FL +
Sbjct: 276 VSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGN-GDILVFLNGE 334
Query: 391 MEVE---WACEKFDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPG 447
E+ A K + LP + +L+ EQ +FK + GR ++ ATNVAETSLT+PG
Sbjct: 335 REIRDTAAALVKANLRHTNVLPLYARLTVSEQNQIFKPHSGRN-IVLATNVAETSLTVPG 393
Query: 448 VKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET 507
+K+VID G + S + T + L + VSQ+SANQR+GR GR G C RLYS+ D+++
Sbjct: 394 IKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKS 453
Query: 508 RPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAI---- 563
R +PEI R +L +L++ AL + D+ F F++AP + I +R L ++ A+
Sbjct: 454 RAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIE 513
Query: 564 --------KLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 615
K ++ +LT+ G+ L K I+PRL K+++S + L++ + ++
Sbjct: 514 NADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQD 573
Query: 616 SIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYR----EWDSLPREERNKWCWENSV 671
R +++ +D +F ++ D +LL++++ + L + + K C +
Sbjct: 574 P---RERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKDLTQNQFRKLCQREFL 630
Query: 672 NAKSLRRCQDTIKELETCLEKELAIIIPS 700
+ LR QD +L+ L KE I + S
Sbjct: 631 SYVRLREWQDIFSQLKLTL-KEQQITLTS 658
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 343 (125.8 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
Identities = 97/325 (29%), Positives = 168/325 (51%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+ ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 477 IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQT 536
Query: 421 CVFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK + PG RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS++
Sbjct: 537 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 596
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 597 NAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHF 656
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS +A+ ++I++L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 657 LSRLMDPPSNEAVLLSIKHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGAL 713
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH-RNGDLFTLLSVYREWDS 656
L +AA ++ +G EK+ AD + + D T+++ ++ W+
Sbjct: 714 FCCLDPVLTIAASLSFKDPFVIPLGK--EKV-ADARRKELAKDTKSDHLTVVNAFKGWEK 770
Query: 657 LP----REERNKWCWENSVNAKSLR 677
R E++ +CWE +++ +L+
Sbjct: 771 AKQRGFRYEKD-YCWEYFLSSNTLQ 794
Score = 340 (124.7 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
Identities = 92/301 (30%), Positives = 149/301 (49%)
Query: 57 LKMKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLK 116
++ K+DK DE A +S + Y + + + + + K K
Sbjct: 105 VQTKNDK-DEEAQISWFAPEDHGYGTEAPAENKPNSVKNVEHQEKKMINQEKRPFRIRDK 163
Query: 117 YLD-DPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDIL 175
Y+D D + + ++ DA +D ED Q+ + + E +R + LP Y +++++
Sbjct: 164 YIDRDSEYLLQENEPDATLDQQLLEDLQK---KKTDLRYI-EMQRFREKLPSYGMQKELV 219
Query: 176 RRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVR 231
I Q+ V+ GETGCGK+TQ+ QF+ D+ G + IVCTQPR+I+AIS+A+RV
Sbjct: 220 NMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVA 279
Query: 232 -EESRGCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAH 289
E + C +S S ++Y T +LQ +D LS +S I++DE H
Sbjct: 280 AERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIH 339
Query: 290 ERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRY 349
ER+ R DL++V+MSAT +A + S+YF +C + H+ G FPV V Y
Sbjct: 340 ERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEY 398
Query: 350 V 350
+
Sbjct: 399 L 399
Score = 40 (19.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 127 KESYDAN-VDVFRFEDCQRFDWSRIQAFIVRECKRLEDG 164
++ Y A+ VDV D ++ D + I A I EDG
Sbjct: 453 RQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDG 491
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 598 (215.6 bits), Expect = 3.7e-57, P = 3.7e-57
Identities = 152/465 (32%), Positives = 244/465 (52%)
Query: 249 FSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCR 308
F D+++ ++TD LL+ ++D L + SC+I+DEAHER+ R
Sbjct: 67 FDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKR 126
Query: 309 RFDL-----RLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASY 363
R +L ++++MSAT D S+YF + ++ GR P+ V Y Y
Sbjct: 127 RKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTK------QPQNDY 180
Query: 364 VSDVVRMVGEVHTTEKEGT-ILAFLTSKMEVEW---ACEKF-----DA-PSAVALPFHGQ 413
+ + V ++H IL FLT + E+E C D P+ + LP +
Sbjct: 181 LHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYAS 240
Query: 414 LSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLR 472
L + +Q VF+ P G RKVI +TN+AETS+TI G+K+V+D+GMVK + P +G+ VL
Sbjct: 241 LPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLA 300
Query: 473 VCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALG 532
V RVS++ A QR GRAGR + G CYRLY++ +FE PEI R +L +L++LA+
Sbjct: 301 VQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMK 360
Query: 533 IRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLI 592
+ +V FDF+ PS I+ AI L LGA++ + LT G+ + +EP+ K I
Sbjct: 361 VPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTI 420
Query: 593 LSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYR 652
L + E L + ++++ S+ S E+++ ++ +F GD TLL++YR
Sbjct: 421 LMSPKFHCTEEILTIVSLLS-VDSVLHNPPSRREEVQG--VRKKFISSEGDHMTLLNIYR 477
Query: 653 EWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLEKELAI 696
+ +L + WC EN VN+K++ + +L + CL+ + I
Sbjct: 478 TFKNLGGNK--DWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPI 520
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 380 (138.8 bits), Expect = 8.3e-57, Sum P(3) = 8.3e-57
Identities = 122/419 (29%), Positives = 196/419 (46%)
Query: 378 EKEGTILAFLTSKMEVEWACEKF-------DAPSAVALPFHGQLSFDEQFCVF-KSYPGR 429
E G IL FLT E+ EK D+ + LP HG + Q +F + P +
Sbjct: 501 EGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNK 560
Query: 430 RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAG 489
RK++ ATN+AE+S+TI V +V+D G KE+ ++ + L +S++SA+QR GRAG
Sbjct: 561 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAG 620
Query: 490 RTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSA 547
R + G CYRLY K ++ P Q PEI R L L I +L + + F + P A
Sbjct: 621 RVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDA 680
Query: 548 KAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVL 607
A+E AI L +GA+ N V ELT G+ L L ++P +GK++L + L +
Sbjct: 681 LAVENAIELLKTIGAL---NDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTI 737
Query: 608 AAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWDSLPREERNK-W 665
AA +A S + +E AD K F + D LL Y + R K +
Sbjct: 738 AAALAYRSPFVLPLNRKEE---ADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDF 794
Query: 666 CWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYD---KWLKEIILS 722
CW+N ++ +LR +D + L ++ + S P+ Y +Y + + ++ +
Sbjct: 795 CWQNFLSPVTLRMMEDMRNQFLDLLS-DIGFVDKS----KPNAYNQYSYDMEMISAVLCA 849
Query: 723 ALAENVAMFSGYDQ-LGYEVAMTGQHVQLHP-SCSLLIFGQKPTWVVFGELLSVNNQYL 779
L NV + + G+ V +HP S + + ++V+ E + + Y+
Sbjct: 850 GLYPNVVQCKRRGKRTAFYTKELGK-VDIHPGSVNARVNLFSLPYLVYSEKVKTTSVYI 907
Score = 308 (113.5 bits), Expect = 8.3e-57, Sum P(3) = 8.3e-57
Identities = 71/195 (36%), Positives = 110/195 (56%)
Query: 155 VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA----AE 210
V+ K + LP + +++ L + Q+LV+ GETGCGK+TQL QF+ + I+ A+
Sbjct: 218 VKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGAD 277
Query: 211 QSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQH 270
+I+CTQPR+I+AIS+A R+ E RG +SV S + +++++ T LL+
Sbjct: 278 CNIICTQPRRISAISVASRISAE-RGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRR 336
Query: 271 FMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
+ D +L+ +S ++VDE HER RR DLRL++MSAT +A S YF
Sbjct: 337 LIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYF 396
Query: 331 YDCGISHVVGRNFPV 345
+ H+ G FPV
Sbjct: 397 GNSPTMHIPGFTFPV 411
Score = 39 (18.8 bits), Expect = 8.3e-57, Sum P(3) = 8.3e-57
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 896 LYQGAGVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDDKELLMF 945
++ G+ V+ V LF + +L + T VY ++ + D LLMF
Sbjct: 877 IHPGS-VNARVNLFS----LPYLVYSEKVKTTSVYIRDSTNISDYALLMF 921
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 481 (174.4 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 135/386 (34%), Positives = 198/386 (51%)
Query: 95 KEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKE------SYDANVDVFRFEDCQRF--- 145
K RE R+ + K+ K L D + K+E + D VD +R E Q+F
Sbjct: 456 KHREQKERKRAQHKHWELAGTK-LGDIMGIKKEEEKDEMVTEDGKVD-YRTE--QKFAEH 511
Query: 146 --DWSRIQAFIVRECKRLEDG--LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF 201
+ S ++ ++ LE LPI+ +Q++L + I++++GETG GK+TQL Q+
Sbjct: 512 MKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQY 571
Query: 202 LADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIY 261
L + G I CTQPR++AA+S+A+RV EE G + V F ++ + Y
Sbjct: 572 LHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEM-GVRLGEEVGYAIRFEDCTSENTIIKY 630
Query: 262 MTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATA 321
MTD LL+ + + DL S II+DEAHERS RR DL+LV+ SAT
Sbjct: 631 MTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATM 690
Query: 322 DAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEG 381
DA + + +F + I H+ GR FPVD+ + + YV V+ +VH + G
Sbjct: 691 DADKFASFFGNVPIFHIPGRTFPVDILF------SKTPQEDYVEAAVKQALQVHLSGAPG 744
Query: 382 TILAFLTSKMEVEWACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKV 432
IL F+ + ++E E+ AP+ LP + QL D Q +F+ P G RK
Sbjct: 745 DILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC 804
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVK 458
I ATN+AETSLT+ G+ FVIDSG K
Sbjct: 805 IVATNIAETSLTVDGIMFVIDSGYCK 830
Score = 194 (73.4 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 57/224 (25%), Positives = 111/224 (49%)
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ +V+ ++P L K+++ E L++ + M + +IF R +E+ +D
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLSVPAIFYRPKGREEE--SD 932
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
++ +F D T L+VY +W + WC ++ ++AK++R+ ++ +L+ +
Sbjct: 933 QVREKFAVPESDHLTYLNVYLQWKN--NNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMV 990
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 751
++ + + S T++D +++ I +A A G + Y TG LH
Sbjct: 991 QQ-RMSLASCG-------TDWDV-VRKCICAAYFHQAAKLKGIGE--YVNIRTGMPCHLH 1039
Query: 752 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
P+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L P
Sbjct: 1040 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1083
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 481 (174.4 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 135/386 (34%), Positives = 198/386 (51%)
Query: 95 KEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKE------SYDANVDVFRFEDCQRF--- 145
K RE R+ + K+ K L D + K+E + D VD +R E Q+F
Sbjct: 459 KHREQKERKRAQHKHWELAGTK-LGDIMGIKKEEEKDEMVTEDGKVD-YRTE--QKFAEH 514
Query: 146 --DWSRIQAFIVRECKRLEDG--LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF 201
+ S ++ ++ LE LPI+ +Q++L + I++++GETG GK+TQL Q+
Sbjct: 515 MKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQY 574
Query: 202 LADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIY 261
L + G I CTQPR++AA+S+A+RV EE G + V F ++ + Y
Sbjct: 575 LHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEM-GVRLGEEVGYAIRFEDCTSENTIIKY 633
Query: 262 MTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATA 321
MTD LL+ + + DL S II+DEAHERS RR DL+LV+ SAT
Sbjct: 634 MTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATM 693
Query: 322 DAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEG 381
DA + + +F + I H+ GR FPVD+ + + YV V+ +VH + G
Sbjct: 694 DADKFASFFGNVPIFHIPGRTFPVDILF------SKTPQEDYVEAAVKQALQVHLSGAPG 747
Query: 382 TILAFLTSKMEVEWACEKF--------DAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKV 432
IL F+ + ++E E+ AP+ LP + QL D Q +F+ P G RK
Sbjct: 748 DILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC 807
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVK 458
I ATN+AETSLT+ G+ FVIDSG K
Sbjct: 808 IVATNIAETSLTVDGIMFVIDSGYCK 833
Score = 194 (73.4 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 57/224 (25%), Positives = 111/224 (49%)
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LT G+ +V+ ++P L K+++ E L++ + M + +IF R +E+ +D
Sbjct: 882 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVS-MLSVPAIFYRPKGREEE--SD 938
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE 691
++ +F D T L+VY +W + WC ++ ++AK++R+ ++ +L+ +
Sbjct: 939 QVREKFAVPESDHLTYLNVYLQWKN--NNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMV 996
Query: 692 KELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLH 751
++ + + S T++D +++ I +A A G + Y TG LH
Sbjct: 997 QQ-RMSLASCG-------TDWDV-VRKCICAAYFHQAAKLKGIGE--YVNIRTGMPCHLH 1045
Query: 752 PSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
P+ SL G P ++V+ EL+ +Y+ CVTA D + L+ L P
Sbjct: 1046 PTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 1089
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 484 (175.4 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 139/460 (30%), Positives = 234/460 (50%)
Query: 338 VVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEK-EGTILAFLTSKM---EV 393
+ GR FPV++ + P V +VV+ V ++H E G IL FL + E+
Sbjct: 342 IEGRQFPVEIIHSP------KPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEI 395
Query: 394 EWACEKF------DAPSAVALPFHGQLSFDEQFCVFKSYPGR-RKVIFATNVAETSLTIP 446
+ E++ D P ALP GQLS + Q F+ GR RKV+ ATN+AETS+T+P
Sbjct: 396 QRLIEEYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVP 455
Query: 447 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 506
GV++VID+G K + G+ L V +S+SSA QRAGRAGR PG+CYRLY++ ++
Sbjct: 456 GVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK 515
Query: 507 TRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLN 566
PEI R ++ A L ++A G+ D+ F +D P +E A+ L LGAI +
Sbjct: 516 EMRDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAID-D 574
Query: 567 NGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLG--REGLVLAAVMANASSIFCRVGSD 624
G +TE GK + +L + LG+++L+ E + + + ++ IF ++ S+
Sbjct: 575 EGA--ITELGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSE 632
Query: 625 DEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIK 684
+ + + + + + R GDL L+ + + + +R +WC + +N +++R+ + +
Sbjct: 633 EAREEVEEYRRELRRREGDLMVYLTTMQMYTA-ENSDRTEWCKKRKINLRTMRQALNIRR 691
Query: 685 ELET-CLEKELAIIIPSYWLWNPHKYT----EYDKWLKEIILSALAENVAMFSGYDQLGY 739
+L + C+ + + P +P + E + + + + + AM + L Y
Sbjct: 692 QLRSLCVSEGMLTEKPPP---DPQPFVPLSPEAAETITKCFMKGFCTSTAMLA--PDLSY 746
Query: 740 EVAMTGQHV-QLHPSCSLLIFGQKPTWVVFGELLSVNNQY 778
V G+HV +HPS SL GQK ++F E + Y
Sbjct: 747 -VTSQGKHVVAIHPSSSL--HGQKKEAIMFLEHVFTQKSY 783
Score = 115 (45.5 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 161 LEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQP 218
L LPI+ ++ I + +L+L+GETG GKSTQ+ QFLAD + ++ T P
Sbjct: 113 LRKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVIMTLP 170
Score = 106 (42.4 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 213 IVCTQPRKIAAISLAQRV-REESRGCYEDDSVICYPSFSS-----AQHFD------SKVI 260
I TQPR++AA +LA RV RE + P + + FD +K+
Sbjct: 183 IAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTKIK 242
Query: 261 YMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRR-------FDLR 313
++T+ LLQ ++D L + S ++VDE HER L+
Sbjct: 243 FLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDKPGRGGLPLK 302
Query: 314 LVIMSATADAHQLSKYF 330
+V MSATA+ L +F
Sbjct: 303 VVAMSATANIETLENFF 319
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 377 (137.8 bits), Expect = 2.7e-56, Sum P(3) = 2.7e-56
Identities = 141/461 (30%), Positives = 213/461 (46%)
Query: 378 EKEGTILAFLTSKMEVEWACEK------FDAPSAVAL-PFHGQLSFDEQFCVFKS-YPGR 429
E G IL FLT ++ EK F P V L HG + EQ +F+ G
Sbjct: 496 EGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGV 555
Query: 430 RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAG 489
RK++ ATN+AETS+TI V FVID G KE+ ++ L +S+ SA QR GRAG
Sbjct: 556 RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAG 615
Query: 490 RTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSA 547
R PG+CY LY K ++ Q PEI R L L+I +L + + F + +P
Sbjct: 616 RVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPEL 675
Query: 548 KAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILSCFRRRLGREGLV 606
A++ AI L +GA+ N +LT G++L KL +EP+LGK LIL LG +
Sbjct: 676 LAVQKAIAFLKIIGALDENE---DLTTLGRYLSKLPMEPKLGKMLILGAI---LGCLDPI 729
Query: 607 LAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREER-NKW 665
L V A S + D+K A+ K QF + D L+ Y W E +
Sbjct: 730 LT-VAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDY 788
Query: 666 CWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALA 725
CW+N ++ +SLR KE + L K+ +I + + N + +I +
Sbjct: 789 CWKNFLSIQSLRAIDSLRKEFFSLL-KDTGLIDGNPSICNSEGNDA--NLTRAVICYGMY 845
Query: 726 ENVAMFSGYDQLGYEV-AMTGQHVQLHPSCSLLIFGQKP-TWVVFGELLSVNNQYLVCVT 783
+ +++ + + M V L+ + + P W+VF E + VN+ +L T
Sbjct: 846 PGICSVV-HNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDST 904
Query: 784 AFDFDSLSTLCPSPLFDVSMMERKKL-HVRVITGFGSILLK 823
A S STL LF S+ + H++++ G+ +K
Sbjct: 905 AC---SDSTLI---LFGGSISKGDTDGHLKMLGGYLEFFMK 939
Score = 310 (114.2 bits), Expect = 2.7e-56, Sum P(3) = 2.7e-56
Identities = 77/215 (35%), Positives = 121/215 (56%)
Query: 138 RFEDCQRFDWSRIQAFIVRECKRLEDG---LPIYMYRQDILRRIYGEQILVLIGETGCGK 194
+ D Q++ W QA + E +R+ D LP + R +L I Q++V+ GETGCGK
Sbjct: 196 QLRDRQQY-W---QASV--EGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGK 249
Query: 195 STQLVQFLADSGIAAEQ----SIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFS 250
+TQ+ QF+ +S I A + SI+CTQPR+I+A+S+++RV E RG +SV
Sbjct: 250 TTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYE-RGEQLGESVGYKVRLE 308
Query: 251 SAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRF 310
+ D+++++ T LL+ + DR+L ++ +IVDE HER RR
Sbjct: 309 GVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRS 368
Query: 311 DLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPV 345
+L+L++MSAT DA S YF G+ ++ G +PV
Sbjct: 369 ELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 403
Score = 38 (18.4 bits), Expect = 2.7e-56, Sum P(3) = 2.7e-56
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 1203 ASVYSVIKEELNSLL 1217
A +Y +K+EL+ L+
Sbjct: 943 AEIYQTLKKELDELI 957
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 345 (126.5 bits), Expect = 3.7e-56, Sum P(2) = 3.7e-56
Identities = 99/324 (30%), Positives = 165/324 (50%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+V ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 475 IVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQT 534
Query: 421 CVFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK + PG RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS++
Sbjct: 535 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 594
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 595 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 654
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS +A+ ++IR+L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 655 LSRLMDPPSNEAVLLSIRHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGAL 711
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH-RNGDLFTLLSVYREWDS 656
L +AA ++ +G EKI AD + + D T+++ + W+
Sbjct: 712 FCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKDTRSDHLTVVNAFEGWEE 768
Query: 657 LPREE---RNKWCWENSVNAKSLR 677
R +CWE +++ +L+
Sbjct: 769 ARRRGFRYEKDYCWEYFLSSNTLQ 792
Score = 328 (120.5 bits), Expect = 3.7e-56, Sum P(2) = 3.7e-56
Identities = 102/356 (28%), Positives = 169/356 (47%)
Query: 2 VGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMKD 61
+G+W ++ G + VV D E+ ++ L K E E W +D
Sbjct: 62 IGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKESEAQISWFAPED 121
Query: 62 DKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLD-D 120
+ N S N + + KK + +E++M R+R Y+D D
Sbjct: 122 HGYGTEVSTKNTPCSENKLDI-----QEKKLINQEKKMF--RIRN--------RSYIDRD 166
Query: 121 PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYG 180
+ + ++ D +D ED Q+ + ++ +I E + + LP Y +++++ I
Sbjct: 167 SEYLLQENEPDGTLDQKLLEDLQKKK-NDLR-YI--EMQHFREKLPSYGMQKELVNLIDN 222
Query: 181 EQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVR-EESR 235
Q+ V+ GETGCGK+TQ+ QF+ D+ G + IVCTQPR+I+AIS+A+RV E +
Sbjct: 223 HQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 282
Query: 236 GCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXX 294
C +S S ++Y T +LQ +D LS +S I++DE HER+
Sbjct: 283 SCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQ 342
Query: 295 XXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
R DL++++MSAT +A + S+YF +C + H+ G FPV V Y+
Sbjct: 343 SDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYL 397
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 342 (125.4 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 97/324 (29%), Positives = 163/324 (50%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+ ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 589 IAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQT 648
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK P G RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS++
Sbjct: 649 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 708
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 709 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 768
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS +A+ ++I++L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 769 LSRLMDPPSDEAVSLSIKHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGAL 825
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH-RNGDLFTLLSVYREWDS 656
L +AA ++ +G EKI AD + + D T+++ + W+
Sbjct: 826 FCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKDTKSDHLTVVNAFEGWEE 882
Query: 657 LPREE---RNKWCWENSVNAKSLR 677
R +CWE +++ +L+
Sbjct: 883 ARRRGFRYEKDYCWEYFLSSNTLQ 906
Score = 328 (120.5 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 102/356 (28%), Positives = 167/356 (46%)
Query: 2 VGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMKD 61
+GLW ++ G + VV D E+ ++ L K + E W +D
Sbjct: 177 IGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPED 236
Query: 62 DKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLD-D 120
N+ S N+ KK + +E+ R+R+ KY+D D
Sbjct: 237 HGYGTEIPAENKPNSEKKLE-----NQEKKLISQEKRTF--RIRD---------KYIDRD 280
Query: 121 PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYG 180
+ + ++ D +D ED ++ S ++ +I E + + LP Y +++++ I
Sbjct: 281 SEYLLQENEPDVALDQQLLEDLRKKK-SDLR-YI--EMQHFREKLPSYGMQKELVNMIDN 336
Query: 181 EQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVR-EESR 235
Q+ V+ GETGCGK+TQ+ QF+ D G + IVCTQPR+I+AIS+A+RV E +
Sbjct: 337 HQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 396
Query: 236 GCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXX 294
C +S S ++Y T +LQ +D LS +S I++DE HER+
Sbjct: 397 SCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQ 456
Query: 295 XXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
R DL++++MSAT +A + S+YF +C + H+ G FPV V Y+
Sbjct: 457 SDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYL 511
Score = 40 (19.1 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 90 KKGLFKEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSR 149
K+G + + R+ +E K ++ ++ D + + K+ S + VDV D + D +
Sbjct: 533 KRGFMQGH--VNRQEKEEKEAIYKE-RWPDYVRELRKRYSA-STVDVMEMIDDDKVDLNL 588
Query: 150 IQAFIVRECKRLEDG 164
I A I EDG
Sbjct: 589 IAALIRHIVLEEEDG 603
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 341 (125.1 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 97/324 (29%), Positives = 163/324 (50%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+ ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 468 IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQT 527
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK P G RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS++
Sbjct: 528 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 587
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 588 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 647
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS +A+ ++I++L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 648 LSRLMDPPSNEAVVLSIKHLMELSALDKQE---ELTPLGVHLARLPVEPHIGKMILFGAL 704
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWDS 656
L +AA ++ +G EKI AD + + D T+++ + W+
Sbjct: 705 FCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKETRSDHLTVVNAFEGWEE 761
Query: 657 LPREE---RNKWCWENSVNAKSLR 677
R +CWE +++ +L+
Sbjct: 762 AKRRGFRYEKDYCWEYFLSSNTLQ 785
Score = 325 (119.5 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 97/311 (31%), Positives = 159/311 (51%)
Query: 51 ELVNKWLKMKDDKCDEIANVSNRLGSRNSYA--VFCE--LNERKKGLFKEREMIMRRVRE 106
+L+N ++ K DK D A +S + Y V E +N KK +E++++ + +
Sbjct: 90 QLLNS-VQAKTDK-DSEAQISWFAPEDHGYGTEVSSEKKINSEKKLDNQEKKLLNQEKKT 147
Query: 107 FKNGMHCVLKYLD-DPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGL 165
F+ Y+D D + + ++ + ++D ED QR +I E +R L
Sbjct: 148 FRITDK---SYIDRDSEYLLQENEPNLSLDQHLLEDLQRKKTD--PRYI--EMQRFRKKL 200
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKI 221
P Y +++++ I Q+ V+ GETGCGK+TQ+ QF+ D+ G + IVCTQPR+I
Sbjct: 201 PSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRI 260
Query: 222 AAISLAQRVR-EESRGCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSR 279
+AIS+A+RV E + C +S S ++Y T +LQ +D LS
Sbjct: 261 SAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSS 320
Query: 280 ISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 339
+S I++DE HER+ R DL++++MSAT +A + S+YF +C + H+
Sbjct: 321 VSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIP 380
Query: 340 GRNFPVDVRYV 350
G FPV V Y+
Sbjct: 381 GFTFPV-VEYL 390
Score = 37 (18.1 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 130 YDAN-VDVFRFEDCQRFDWSRIQAFIVRECKRLEDG 164
Y A+ VDV + D + D + I A I EDG
Sbjct: 447 YSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEEDG 482
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 340 (124.7 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 97/324 (29%), Positives = 163/324 (50%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+ ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 467 IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQT 526
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK P G RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS++
Sbjct: 527 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 586
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 587 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 646
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS +A+ ++I++L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 647 LSRLMDPPSDEAVVLSIKHLMELSALDKQE---ELTPLGVHLARLPVEPHIGKMILFGAL 703
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWDS 656
L +AA ++ +G EKI AD + + D T+++ + W+
Sbjct: 704 FCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKETRSDHLTVVNAFEGWEE 760
Query: 657 LPREE---RNKWCWENSVNAKSLR 677
R +CWE +++ +L+
Sbjct: 761 AKRRGFRYEKDYCWEYFLSSNTLQ 784
Score = 325 (119.5 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 96/311 (30%), Positives = 160/311 (51%)
Query: 51 ELVNKWLKMKDDKCDEIANVSNRLGSRNSYA--VFCE--LNERKKGLFKEREMIMRRVRE 106
+L+N ++ K+DK D A +S + Y V E +N KK +E++++ + +
Sbjct: 89 QLLNS-VQAKNDK-DSEAQISWFAPEDHGYGTEVSSEKKINSEKKLDNQEKKLLNQEKKT 146
Query: 107 FKNGMHCVLKYLD-DPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGL 165
++ Y+D D + + ++ + +D ED Q+ +I E +R L
Sbjct: 147 YRITDK---SYIDRDSEYLLQQNEPNLGLDQQLLEDLQKKKTD--PRYI--EMQRFRKKL 199
Query: 166 PIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKI 221
P Y +++++ I Q+ V+ GETGCGK+TQ+ QF+ D+ GI + IVCTQPR+I
Sbjct: 200 PSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQPRRI 259
Query: 222 AAISLAQRVR-EESRGCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSR 279
+AIS+A+RV E + C +S S ++Y T +LQ +D LS
Sbjct: 260 SAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSS 319
Query: 280 ISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 339
+S I++DE HER+ R DL++++MSAT +A + S+YF +C + H+
Sbjct: 320 VSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIP 379
Query: 340 GRNFPVDVRYV 350
G FPV V Y+
Sbjct: 380 GFTFPV-VEYL 389
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 363 (132.8 bits), Expect = 5.3e-55, Sum P(2) = 5.3e-55
Identities = 126/436 (28%), Positives = 212/436 (48%)
Query: 378 EKEGTILAFLTSKMEVEWACEKFDA------PSAVAL-PFHGQLSFDEQFCVFKSYP-GR 429
E+ G +L F+T ++ + +A P+ V L HG ++ EQ +F P G
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGI 635
Query: 430 RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAG 489
RK++ ATN+AETS+TI V +VID G KE+ ++ L +S+++A QR GRAG
Sbjct: 636 RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAG 695
Query: 490 RTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSA 547
R PG CY LY + +E Q+PE+ R L L+I +LG+ + F + P A
Sbjct: 696 RVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEA 755
Query: 548 KAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVL 607
+++ A+ L +GA+ + LT GK L L +EP+LGK+++ LG L
Sbjct: 756 LSVQNAVEYLKIIGALDDDEN---LTPLGKNLSMLPVEPKLGKMLI------LGAIFNCL 806
Query: 608 AAVMANASSIFCR---VGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWDSLPREERN 663
VM + + R + D+K A+ + +F R+ D TL+ Y W R
Sbjct: 807 DPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSG 866
Query: 664 -KWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILS 722
+CW+N +++++L+ D++++ L KE ++I + K + + ++ II +
Sbjct: 867 YDYCWKNFLSSQTLK-AMDSMRKQFFNLLKEASLIDN---IEGCSKLSHDEHLVRAIICA 922
Query: 723 ALAENVAMFSGYDQ-LGYEVAMTGQHVQLHPSCSLLIFGQKPT----WVVFGELLSVNNQ 777
+ V ++ + + GQ V L+ S + G P W+VF + + VN+
Sbjct: 923 GMFPGVCSVVNKEKSITLKTMEDGQ-VLLYSSS---VNGNVPMIPFPWLVFNDKVKVNSV 978
Query: 778 YLVCVTAFDFDSLSTL 793
+L TA DS+ L
Sbjct: 979 FLRDSTAVS-DSVLLL 993
Score = 301 (111.0 bits), Expect = 5.3e-55, Sum P(2) = 5.3e-55
Identities = 69/190 (36%), Positives = 107/190 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ----SIVCTQPRK 220
LP Y + +L+ I Q++V+ GETGCGK+TQL Q++ +S I A + SI+CTQPR+
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+AIS+++RV E RG +SV + D+++++ T LL+ + DR L +
Sbjct: 359 ISAISVSERVAAE-RGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGV 417
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
+ ++VDE HER RR DL+L++MSAT +A S YF H+ G
Sbjct: 418 THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPG 477
Query: 341 RNFPVDVRYV 350
+PV ++
Sbjct: 478 FTYPVRAHFL 487
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 345 (126.5 bits), Expect = 6.7e-55, Sum P(2) = 6.7e-55
Identities = 99/324 (30%), Positives = 165/324 (50%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+V ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 389 IVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQT 448
Query: 421 CVFK-SYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK + PG RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS++
Sbjct: 449 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 508
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 509 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 568
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS +A+ ++IR+L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 569 LSRLMDPPSNEAVLLSIRHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGAL 625
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH-RNGDLFTLLSVYREWDS 656
L +AA ++ +G EKI AD + + D T+++ + W+
Sbjct: 626 FCCLDPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKDTRSDHLTVVNAFEGWEE 682
Query: 657 LPREE---RNKWCWENSVNAKSLR 677
R +CWE +++ +L+
Sbjct: 683 ARRRGFRYEKDYCWEYFLSSNTLQ 706
Score = 312 (114.9 bits), Expect = 6.7e-55, Sum P(2) = 6.7e-55
Identities = 97/326 (29%), Positives = 158/326 (48%)
Query: 33 EERLRNLFVD-HVKGLMEGELVNKWLKMKDDKCDEIANVSNRLGSRNSYAVFCELNERKK 91
EE++ L K E E W +D + N S N + + KK
Sbjct: 6 EEQIVQLLNSVQAKNDKESEAQISWFAPEDHGYGTEVSTKNTPCSENKLDI-----QEKK 60
Query: 92 GLFKEREMIMRRVREFKNGMHCVLKYLD-DPQNVAKKESYDANVDVFRFEDCQRFDWSRI 150
+ +E++M R+R Y+D D + + ++ D +D ED Q+ + +
Sbjct: 61 LINQEKKMF--RIRN--------RSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKK-NDL 109
Query: 151 QAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS----G 206
+ +I E + + LP Y +++++ I Q+ V+ GETGCGK+TQ+ QF+ D+ G
Sbjct: 110 R-YI--EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERG 166
Query: 207 IAAEQSIVCTQPRKIAAISLAQRVR-EESRGCYEDDSVICYPSFSSA-QHFDSKVIYMTD 264
+ IVCTQPR+I+AIS+A+RV E + C +S S ++Y T
Sbjct: 167 KGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTT 226
Query: 265 HCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAH 324
+LQ +D LS +S I++DE HER+ R DL++++MSAT +A
Sbjct: 227 GIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAE 286
Query: 325 QLSKYFYDCGISHVVGRNFPVDVRYV 350
+ S+YF +C + H+ G FPV V Y+
Sbjct: 287 KFSEYFGNCPMIHIPGFTFPV-VEYL 311
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 357 (130.7 bits), Expect = 9.5e-55, Sum P(2) = 9.5e-55
Identities = 116/396 (29%), Positives = 195/396 (49%)
Query: 427 PGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAG 486
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+G
Sbjct: 288 PGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSG 347
Query: 487 RAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDA 544
RAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 348 RAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDP 406
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 407 PNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCED 461
Query: 605 LVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPRE 660
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 462 LLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAP 521
Query: 661 ERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLK 717
WC ++ ++ + L R + ++EL L+++ P P K+ + L+
Sbjct: 522 A--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PKETFEGP-KH----EVLR 572
Query: 718 EIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQ 777
+ + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 573 RCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 631
Query: 778 Y--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 632 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 667
Score = 296 (109.3 bits), Expect = 9.5e-55, Sum P(2) = 9.5e-55
Identities = 83/268 (30%), Positives = 131/268 (48%)
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQPRK+AAIS+AQRV EE + C V F ++ + YMTD CLL+H + D
Sbjct: 5 TQPRKVAAISVAQRVAEEMK-CTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDP 63
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQLSKYF 330
+L++ S II+DEAHER+ R+ L++V+MSAT + +LS +F
Sbjct: 64 NLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFF 123
Query: 331 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSK 390
+C I + GR +PV ++ +Y+ +V++ ++H E G IL FLT +
Sbjct: 124 GNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQ 183
Query: 391 MEVEWACEK-FDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVK 449
E+E +CE F +V + Q + + + Y T V++TSLT V
Sbjct: 184 FEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM------TTVSQTSLTF--VT 235
Query: 450 FVIDSGMVKESYFEPGTGMNVLRVCRVS 477
+ + E+ TG+ + + VS
Sbjct: 236 HIQIMKQISENQHSL-TGLTIAGITGVS 262
Score = 49 (22.3 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 566 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 617
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 356 (130.4 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 109/323 (33%), Positives = 169/323 (52%)
Query: 422 VFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSS 480
VFK P G RK++ ATN+AETS+TI V +VID G +KE++F+ + + VS ++
Sbjct: 559 VFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIAN 618
Query: 481 ANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF- 539
A QR GRAGR PG+CY LY+ Q PEI R L L+I L + + F
Sbjct: 619 AKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFL 678
Query: 540 -DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRR 598
+D PS +AIE+AI +LV L A+ + +LT G L ++ +EP +GK+IL F
Sbjct: 679 QKTMDPPSDRAIELAITHLVDLNALDRDE---KLTPLGFHLARMPVEPHIGKMIL--FGA 733
Query: 599 RLG--REGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWD 655
LG L +AA ++ F +G EKI AD + F + D ++++ + W+
Sbjct: 734 LLGCLDPVLTIAASLSFKDPFFIPLGK--EKI-ADQRRKMFSQNSRSDHLSIVNAFLGWE 790
Query: 656 SLPRE----ERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKY-- 709
R+ ER ++CW+N ++A +L+ Q+ + L + A + S +P
Sbjct: 791 DAKRQGSRFER-EYCWDNFLSANTLQMLQNMKGQFAEHLLR--AGFVNSKDPKDPSSNIN 847
Query: 710 TEYDKWLKEIILSALAENVAMFS 732
+E K +K +I++ L VA S
Sbjct: 848 SENKKLVKAVIVAGLYPKVAKIS 870
Score = 302 (111.4 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 72/195 (36%), Positives = 105/195 (53%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS---- 212
E + LP Y R++++R I ++LV+ GETGCGK+TQ+ QF+ D I Q
Sbjct: 212 EMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCR 271
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSF--SSAQHFDSKVIYMTDHCLLQH 270
+VCTQPR+I+AIS+A+RV E + Y S ++Y T +LQ
Sbjct: 272 VVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQW 331
Query: 271 FMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
+D LS I+ +++DE HERS R DL++V+MSAT +A + SKYF
Sbjct: 332 LHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYF 391
Query: 331 YDCGISHVVGRNFPV 345
+C + H+ G FPV
Sbjct: 392 NNCPMIHIPGYTFPV 406
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 354 (129.7 bits), Expect = 2.3e-54, Sum P(3) = 2.3e-54
Identities = 131/465 (28%), Positives = 215/465 (46%)
Query: 367 VVRMVGEVHTTEKEGTILAFL------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQF 420
+ ++ + E++G IL FL ++ ++ + F + + +P H + Q
Sbjct: 456 IAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQT 515
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
VFK P G RK++ ATN+AETS+TI V FVID G +KE++F+ ++ + VS++
Sbjct: 516 QVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKA 575
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+A QR GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 576 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYF 635
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
+D PS A+ +AI +L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 636 LSKLMDPPSRDAVMLAINHLMELNALDRQE---ELTPLGVHLARLPVEPHIGKMILFGAL 692
Query: 598 RRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFC-HRNGDLFTLLSVYREWDS 656
L +AA ++ +G EK+ AD + + + D T+++ + W+
Sbjct: 693 FCCLDPVLTIAASLSFKDPFVIPLGK--EKV-ADARRKELSKNTKSDHLTVVNAFTGWEE 749
Query: 657 LPRE---ERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAI-IIPSYWLWNPHKYTEY 712
R +CWE ++ +L+ + + E LA + S +P T
Sbjct: 750 TRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFA---EHLLAAGFVNSRDPKDPKSNTNS 806
Query: 713 D--KWLKEIILSALAENVAM----FSGYDQLGYEVAMTGQHVQLHP-SCSLLIFGQKPTW 765
D K LK +I + L VA FS ++ T V +HP S ++ W
Sbjct: 807 DNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNW 866
Query: 766 VVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLF---DVSMMERK 807
+V+ + ++ YL +D +S C LF D+S+ + K
Sbjct: 867 LVYHLKMRTSSIYL-----YDCTEVSPYCL--LFFGGDISIQKDK 904
Score = 313 (115.2 bits), Expect = 2.3e-54, Sum P(3) = 2.3e-54
Identities = 83/243 (34%), Positives = 129/243 (53%)
Query: 117 YLD-DPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQ--D 173
+LD D + + +K DA++D ED ++ +I E +R + LP Y RQ +
Sbjct: 141 FLDQDVEYLFEKNDQDADLDEQLKEDLRKKKSD--PRYI--EMQRFREKLPSYGMRQKQE 196
Query: 174 ILRRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQR 229
++ I ++ V+ GETGCGK+TQ+ QF+ D G + IVCTQPR+I+AIS+A+R
Sbjct: 197 LVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAER 256
Query: 230 VR-EESRGCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDE 287
V E + C S S ++Y T +LQ +D+ LS IS +++DE
Sbjct: 257 VAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDE 316
Query: 288 AHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDV 347
HER+ R DL++++MSAT +A + S+YF +C + H+ G FPV V
Sbjct: 317 IHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV-V 375
Query: 348 RYV 350
Y+
Sbjct: 376 EYL 378
Score = 38 (18.4 bits), Expect = 2.3e-54, Sum P(3) = 2.3e-54
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 2 VGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKW 56
+GLW +R G VV D E+ ++ L + E E ++ W
Sbjct: 50 IGLWYARKQGQKSKETDRQQRAVVRMDERREEQIVQLLNAVQPRAEKEQEAMSWW 104
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 328 (120.5 bits), Expect = 8.2e-54, Sum P(2) = 8.2e-54
Identities = 102/356 (28%), Positives = 167/356 (46%)
Query: 2 VGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMKD 61
+GLW ++ G + VV D E+ ++ L K + E W +D
Sbjct: 57 IGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPED 116
Query: 62 DKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLD-D 120
N+ S N+ KK + +E+ R+R+ KY+D D
Sbjct: 117 HGYGTEIPAENKPNSEKKLE-----NQEKKLISQEKRTF--RIRD---------KYIDRD 160
Query: 121 PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYG 180
+ + ++ D +D ED ++ S ++ +I E + + LP Y +++++ I
Sbjct: 161 SEYLLQENEPDVALDQQLLEDLRKKK-SDLR-YI--EMQHFREKLPSYGMQKELVNMIDN 216
Query: 181 EQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVR-EESR 235
Q+ V+ GETGCGK+TQ+ QF+ D G + IVCTQPR+I+AIS+A+RV E +
Sbjct: 217 HQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 276
Query: 236 GCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXX 294
C +S S ++Y T +LQ +D LS +S I++DE HER+
Sbjct: 277 SCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQ 336
Query: 295 XXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
R DL++++MSAT +A + S+YF +C + H+ G FPV V Y+
Sbjct: 337 SDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYL 391
Score = 323 (118.8 bits), Expect = 8.2e-54, Sum P(2) = 8.2e-54
Identities = 98/320 (30%), Positives = 157/320 (49%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFC--VFK 424
+ ++ + E++G IL FL W D S + Q+ F VFK
Sbjct: 469 IAALIRHIVLEEEDGAILVFLPG-----W-----DNISTLHDLLMSQVMFKSDTIGQVFK 518
Query: 425 SYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQ 483
P G RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS+++A Q
Sbjct: 519 KTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ 578
Query: 484 RAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DF 541
R GRAGR +PG CY LY+ Q PEI R L L+I L + + F
Sbjct: 579 RKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRL 638
Query: 542 IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLG 601
+D PS +A+ ++I++L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 639 MDPPSDEAVSLSIKHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGALFCCL 695
Query: 602 REGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH-RNGDLFTLLSVYREWDSLPRE 660
L +AA ++ +G EKI AD + + D T+++ + W+ R
Sbjct: 696 DPVLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKDTKSDHLTVVNAFEGWEEARRR 752
Query: 661 E---RNKWCWENSVNAKSLR 677
+CWE +++ +L+
Sbjct: 753 GFRYEKDYCWEYFLSSNTLQ 772
Score = 40 (19.1 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 90 KKGLFKEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSR 149
K+G + + R+ +E K ++ ++ D + + K+ S + VDV D + D +
Sbjct: 413 KRGFMQGH--VNRQEKEEKEAIYKE-RWPDYVRELRKRYSA-STVDVMEMIDDDKVDLNL 468
Query: 150 IQAFIVRECKRLEDG 164
I A I EDG
Sbjct: 469 IAALIRHIVLEEEDG 483
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 328 (120.5 bits), Expect = 8.4e-54, Sum P(2) = 8.4e-54
Identities = 102/356 (28%), Positives = 169/356 (47%)
Query: 2 VGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMKD 61
+G+W ++ G + VV D E+ ++ L K E E W +D
Sbjct: 62 IGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKESEAQISWFAPED 121
Query: 62 DKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLD-D 120
+ N S N + + KK + +E++M R+R Y+D D
Sbjct: 122 HGYGTEVSTKNTPCSENKLDI-----QEKKLINQEKKMF--RIRN--------RSYIDRD 166
Query: 121 PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYG 180
+ + ++ D +D ED Q+ + ++ +I E + + LP Y +++++ I
Sbjct: 167 SEYLLQENEPDGTLDQKLLEDLQKKK-NDLR-YI--EMQHFREKLPSYGMQKELVNLIDN 222
Query: 181 EQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVR-EESR 235
Q+ V+ GETGCGK+TQ+ QF+ D+ G + IVCTQPR+I+AIS+A+RV E +
Sbjct: 223 HQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAE 282
Query: 236 GCYEDDSVICYPSFSSA-QHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXX 294
C +S S ++Y T +LQ +D LS +S I++DE HER+
Sbjct: 283 SCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQ 342
Query: 295 XXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
R DL++++MSAT +A + S+YF +C + H+ G FPV V Y+
Sbjct: 343 SDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYL 397
Score = 323 (118.8 bits), Expect = 8.4e-54, Sum P(2) = 8.4e-54
Identities = 99/318 (31%), Positives = 160/318 (50%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFK-S 425
+V ++ + E++G IL FL + D + + G +S Q VFK +
Sbjct: 475 IVALIRYIVLEEEDGAILVFLPGWDNISTL---HDLLMSQVMFKSGTMS---Q--VFKRT 526
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK++ ATN+AETS+TI V +VID G +KE++F+ ++ + VS+++A QR
Sbjct: 527 PPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 586
Query: 486 GRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFID 543
GRAGR +PG CY LY+ Q PEI R L L+I L + + F +D
Sbjct: 587 GRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMD 646
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
PS +A+ ++IR+L++L A+ ELT G L +L +EP +GK+IL
Sbjct: 647 PPSNEAVLLSIRHLMELNALDKQE---ELTPLGVHLARLPVEPHIGKMILFGALFCCLDP 703
Query: 604 GLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH-RNGDLFTLLSVYREWDSLPREE- 661
L +AA ++ +G EKI AD + + D T+++ + W+ R
Sbjct: 704 VLTIAASLSFKDPFVIPLGK--EKI-ADARRKELAKDTRSDHLTVVNAFEGWEEARRRGF 760
Query: 662 --RNKWCWENSVNAKSLR 677
+CWE +++ +L+
Sbjct: 761 RYEKDYCWEYFLSSNTLQ 778
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 398 (145.2 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 146/479 (30%), Positives = 229/479 (47%)
Query: 373 EVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV-ALPFHGQLSFDEQFCVFKSYP-GRR 430
E+ +K G IL FL E+ AC + + + LP H L EQ VF P G+R
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRACGMLRSLNCLHVLPLHASLETKEQRKVFVPPPSGKR 939
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
KV+ ATNVAETS+TI + V+D+G VKE+ ++ M L S ++ QR GRAGR
Sbjct: 940 KVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACKQRRGRAGR 999
Query: 491 TEPGRCYRLYSK---SDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPS- 546
+ G CY+LY++ S RP EPE+ RV L L + A+GI DV+GF AP+
Sbjct: 1000 VQAGECYKLYTRKLESQMAERP---EPEMRRVPLEQLCLSVRAMGIADVRGF-LARAPTP 1055
Query: 547 --AKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLG--R 602
A A+E AI L ++G + +G ELT G+ L + + R GKL++ + G
Sbjct: 1056 PEAAAVEGAITMLRRMGCL---DGE-ELTALGRQLAAIPADLRCGKLMV--YGAVFGCLE 1109
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE-- 660
+ + +AA++++ +F V D++ +A + +F +GDL T L ++ WD++ R+
Sbjct: 1110 DCVSVAALLSSGRGVF--VSPPDKRDQAREARARFAAGDGDLLTDLRAFQAWDAMMRDPS 1167
Query: 661 --ERN--KWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS---YWLWNPHKYTEY- 712
+R+ +C +N ++ +L + T L EL ++ P Y P T
Sbjct: 1168 VQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLV-ELGLVRPGDAGYSNRGPPPSTSEG 1226
Query: 713 ---DKWL-KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVF 768
K+L + + SA A +A Y + +M+G V++ P + + + VF
Sbjct: 1227 GASSKYLLRALTASAFAPQIARIQ-YPDKKFAASMSGA-VEIDPEAKTIRYYNQENGRVF 1284
Query: 769 GELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGSILLKKFCG 827
S T FD S L S++ K+ VR +T F + L F G
Sbjct: 1285 VHPSS---------TLFDSQGFSGNAAF-LSYFSIISTSKVFVRDLTPFNAYTLLLFAG 1333
Score = 251 (93.4 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 73/243 (30%), Positives = 120/243 (49%)
Query: 126 KKESYDANVDVFRFEDCQRFDWSRIQAFI-VRECKRLEDGLPIYMYRQDILRRIYGEQIL 184
+K+ N+ V+ + + +W R Q R+ LP ++ R +I+R + Q+
Sbjct: 594 RKQRRPKNI-VWNPDSASKNEWLRRQETPEYRKMLGQRQKLPAWLLRDEIVRTVAEHQVT 652
Query: 185 VLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRKIAAISLAQRVREESRGCYED 240
++ GETG GKSTQ VQF+ D G+ +I+ TQPR+I+A+ LA RV +E C +
Sbjct: 653 IIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVTQPRRISALGLADRVSDER--CSQV 710
Query: 241 DSVICYPSFSSAQHFD-SKVIYMTDHCLLQHF------MND--RDLSRISCIIVDEAHER 291
+ Y ++ +++ ++T LL+ + D L+ +S +++DE HER
Sbjct: 711 GQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGRVEDVVASLADVSHVVIDEVHER 770
Query: 292 SXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGIS----HVVGRNFPVDV 347
S +R DL+LV+MSAT D+ + YF GI + GR FPV
Sbjct: 771 SLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIRVGQVEIAGRTFPVTD 830
Query: 348 RYV 350
Y+
Sbjct: 831 YYL 833
Score = 38 (18.4 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 65 DEIANVSNRLGSRNSYAVFCELNE 88
D +A LG+R +Y + E E
Sbjct: 852 DPVAKAIQNLGTRINYNLLVETTE 875
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 375 (137.1 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 120/412 (29%), Positives = 196/412 (47%)
Query: 378 EKEGTILAFLTSKMEVEWACEKFDA------PSAVALPF-HGQLSFDEQFCVF-KSYPGR 429
E+ G +L FLT ++ ++ A P+ V L HG ++ EQ +F ++ P
Sbjct: 537 ERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNI 596
Query: 430 RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAG 489
RK++ ATN+AE S+TI V FV+D G KE+ ++ L +SQ+SA QR GRAG
Sbjct: 597 RKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAG 656
Query: 490 RTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSA 547
R PG CY LY K ++ Q PE+ R L L+I +L + + F + AP +
Sbjct: 657 RLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPES 716
Query: 548 KAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVL 607
A++ AI L +GA+ LT+ GK L L ++P+LGK+++ R L +
Sbjct: 717 LAVQNAIGFLKMIGALDEKEN---LTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773
Query: 608 AAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREWDSLPRE-ERNKW 665
+ ++ D+K A K++F ++ D L+ + W RE ++
Sbjct: 774 VSGLSVRDPFLL---PQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEF 830
Query: 666 CWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALA 725
CW N ++A++L+ K+ L KE ++ L N K + ++ +I S L
Sbjct: 831 CWRNFLSAQTLQAIHSLRKQFNYIL-KEAGLVHDDLALNN--KLSHNQSLVRAVICSGLF 887
Query: 726 ENVAMFSGYD-QLGYEVAMTGQHVQLHPSCSLLIFGQKP-TWVVFGELLSVN 775
+A + + ++ GQ V L+ + F P W+VFGE + VN
Sbjct: 888 PGIASVVHRETSMSFKTMDDGQ-VSLYANSVNSRFPTIPYPWLVFGEKVKVN 938
Score = 270 (100.1 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 63/190 (33%), Positives = 108/190 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ----SIVCTQPRK 220
LP + ++ +L+ I Q++V+ GETGCGK+TQL Q++ +S I + + +I+CTQPR+
Sbjct: 260 LPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 319
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+++++RV E RG ++V + ++ +++ T LL+ ++DR+L+ +
Sbjct: 320 ISAMAVSERVSAE-RGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGV 378
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
+ + VDE HER RR DLRLV+MSAT +A S Y+ H+ G
Sbjct: 379 THVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPG 438
Query: 341 RNFPVDVRYV 350
PV ++
Sbjct: 439 FTHPVKAHFL 448
Score = 50 (22.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 874 GLVSDVLEYEKKWLHNECIEKCLYQGAGVSPSVALFGAGAEIKHLELERRFLTVD 928
GLV D L K HN+ + + + +G+ P +A + H E F T+D
Sbjct: 859 GLVHDDLALNNKLSHNQSLVRAVIC-SGLFPGIA------SVVHRETSMSFKTMD 906
Score = 37 (18.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 541 FIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLV 580
F+D A++ L +L KL + ++ +EGK+L+
Sbjct: 979 FMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKEGKYLM 1018
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 339 (124.4 bits), Expect = 9.6e-53, Sum P(3) = 9.6e-53
Identities = 105/323 (32%), Positives = 153/323 (47%)
Query: 380 EGTILAFLTSKMEVEWACEKFDAPSAVAL-------PFHGQLSFDEQFCVFKSYP-GRRK 431
EG +L FL ++ + +L H LS +Q F P G RK
Sbjct: 868 EGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPLGVRK 927
Query: 432 VIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRT 491
++ ATN+AET +TIP V FVIDSG KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 928 IVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRV 987
Query: 492 EPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKA 549
G C+R+Y++ FE+ PEI RV L L I+ + + F +D P +
Sbjct: 988 RDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALDPPQPQV 1047
Query: 550 IEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--L 607
I A+ L ++GA +LN +LT G+ L L + ++GK+++ F G V L
Sbjct: 1048 IGNAMNLLRKIGACQLNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATL 1103
Query: 608 AAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNK--- 664
AAVM S +G DE AD K D T+ + Y W +E ++
Sbjct: 1104 AAVMTEKSPFTTPIGRKDE---ADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEM 1160
Query: 665 -WCWENSVNAKSLRRCQDTIKEL 686
+C N +N SL +D +EL
Sbjct: 1161 TYCRRNFLNRTSLLTLEDVKQEL 1183
Score = 311 (114.5 bits), Expect = 9.6e-53, Sum P(3) = 9.6e-53
Identities = 128/447 (28%), Positives = 208/447 (46%)
Query: 5 WESRLNGAHCLN--LKLIPHVVVPSDADELEERLRNLFVDHV-KGLMEGELV-----NKW 56
W+ R+ + + + P +V D+ + + L + H+ KG +L+ + W
Sbjct: 413 WKCRVRVTRSSDDVMTMCP-TIVTEDSMQAQHLAATLALYHLTKGQSVHQLLPPTYRDVW 471
Query: 57 LKMKD-DKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVL 115
L+ D +K E N R+++ LN+ K+ + E +V E L
Sbjct: 472 LEWSDIEKKKEEENKIETNKPRDNFIAKL-LNKLKQQQQLQSEK-QTKVSEGPEDSWENL 529
Query: 116 KYLDDPQNVAKKESYDANVDVFR--FEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQD 173
+D N++ + + N++ R F Q SR Q F+ +E R E LP++ +R
Sbjct: 530 VSDEDFNNLSLETADTDNLEPSRNLFRKLQSS--SRYQKFL-KE--RQE--LPVFKHRHS 582
Query: 174 ILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS----IVCTQPRKIAAISLAQR 229
I+ + +++V+ GETG GKSTQ+ FL + + E + IVCTQPR+I+A+SLA R
Sbjct: 583 IVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRISAVSLATR 642
Query: 230 VREESRGCYEDD---SVIC-YP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCII 284
V EE GC + +C Y S ++++Y T LL+ D LS IS +I
Sbjct: 643 VCEEL-GCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSISHVI 701
Query: 285 VDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFP 344
VDE HERS +R DL L++MSAT D+ + S YF C I + GR++P
Sbjct: 702 VDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYP 761
Query: 345 VDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF---D 401
V+V +V T V S+ + E+E I+ +T+K +++
Sbjct: 762 VEVFHVEDVIEATGYVLEKDSEYCQKF-----LEEEEEIMINVTTKGGGTTKYQEYVPVQ 816
Query: 402 APSAVAL-PFHGQLSFDEQFCVFKSYP 427
+ S + L P++ + S Q VF P
Sbjct: 817 SGSGIDLSPYYQKYSSRTQQAVFYMNP 843
Score = 47 (21.6 bits), Expect = 9.6e-53, Sum P(3) = 9.6e-53
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVDVY-HSNANI 936
+SP + LFG E++H E LTVD + H A +
Sbjct: 1292 ISPFPILLFGGDIEVQHRE---HLLTVDGWIHFQAPV 1325
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 356 (130.4 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 128/424 (30%), Positives = 201/424 (47%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKV 432
EG +L FL ++ + +F + + H LS +Q F P G RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKI 926
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 987 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1046
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN +LT G+ L L + ++GK+++ F G V LA
Sbjct: 1047 SNAMHLLRKIGACELNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1102
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1103 AVMTEKSPFTTPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIA 1159
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYT-EYDK--WLKEIIL 721
+C N +N SL ++ IK T L K + I +Y+ + T + + LK ++
Sbjct: 1160 YCRRNFLNRTSLLTLEE-IKRRRTTLLKLIFYSIKTYYSSSRASQTLSFQEIALLKAVLT 1218
Query: 722 SALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSCSLLIFGQKPTWVVFGELLSVN 775
+ L +NV +++ + ++A T Q Q+HPS S+ Q W+++ E +
Sbjct: 1219 AGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPS-SVNRDLQTYGWLLYQEKIRYA 1277
Query: 776 NQYL 779
YL
Sbjct: 1278 RVYL 1281
Score = 294 (108.6 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + E +IVCTQPR
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPR 628
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV +E GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 629 RISAVSLATRVCDEL-GCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 747
Query: 335 ISHVVGRNFPVDV 347
I + GR++PV+V
Sbjct: 748 ILRISGRSYPVEV 760
Score = 50 (22.7 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P SV LFG E++H E R L+VD
Sbjct: 1287 ITPFSVLLFGGDIEVQHRE---RLLSVD 1311
Score = 43 (20.2 bits), Expect = 1.3e-52, Sum P(4) = 1.3e-52
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ +E L + + + L +L+NK LK + +
Sbjct: 467 SDAEKKKEELNKMETNKPRDLFIAKLLNK-LKQQQQQ 502
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 336 (123.3 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 106/336 (31%), Positives = 162/336 (48%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G +L FL E++ E+ + + V P H LS +EQ VF P G
Sbjct: 841 GAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVI 900
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++P GM L VS+++A QR GRAGR
Sbjct: 901 KIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGR 960
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFD-----FIDA 544
G C+ L+S + + + Q+ PEI RV L LRI L + Q I+
Sbjct: 961 VASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEP 1020
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P +++ + L LGA+ + +LT G L L ++ R+GKL+L R
Sbjct: 1021 PRTESLRASKLRLQDLGALTADE---KLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPA 1077
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN- 663
L +AA +A S V D++ +A+ K+ F N D LL Y+ W +E
Sbjct: 1078 LTIAASLAFKSPF---VSPWDKREEANKKKLDFAVGNSDYLALLQAYKGWRLSTKEGSQA 1134
Query: 664 --KWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
+C EN ++ + L+ ++K T L ++ +
Sbjct: 1135 SYNYCRENFLSGRVLQEIA-SLKRQFTELLSDIGFV 1169
Score = 319 (117.4 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 88/254 (34%), Positives = 133/254 (52%)
Query: 116 KYLDDPQNVAKKESYDANVDV---FRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQ 172
K L +V K +Y+ NV + FR + R R Q+ + K LP + R+
Sbjct: 494 KKLSRKYDVHSKSTYNENVKICMQFRLKKSSR----RFQSMLHERQK-----LPAWQERE 544
Query: 173 DILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA----AEQSIVCTQPRKIAAISLAQ 228
IL + Q+LV+ G TGCGK+TQ+ QF+ D+ + A +I+CTQPR+I+AIS+A+
Sbjct: 545 TILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAE 604
Query: 229 RVREESRGCYEDDSV-ICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVD 286
RV +E E V + Y S + ++++Y T LL+ D L I+ +IVD
Sbjct: 605 RVAKERT---ERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVD 661
Query: 287 EAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVD 346
E HER+ +R DLR+++MSAT +A S+YF+ C I ++ GR FPVD
Sbjct: 662 EVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVD 721
Query: 347 VRYVPCATAGTSAV 360
++ A T V
Sbjct: 722 QFFLEDVIAMTRYV 735
Score = 41 (19.5 bits), Expect = 1.3e-52, Sum P(3) = 1.3e-52
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK +K F+T DG +H+ + Q P +K+K ++F S SVY
Sbjct: 1240 QPKAEELK-FVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSM-VSVY 1297
Query: 1207 SVI 1209
++
Sbjct: 1298 PLV 1300
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 340 (124.7 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 83/197 (42%), Positives = 117/197 (59%)
Query: 398 EKFDAPSAV-ALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSG 455
EK D+ + LP + L+ ++Q VF+ P G R + ATNVAETSLTIPG+K+V+D G
Sbjct: 569 EKSDSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCG 628
Query: 456 MVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPE 515
VK+ +++ TG++ RV +SQ+SANQRAGRAGRTEPG CYRLYS + F PE
Sbjct: 629 KVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPE 688
Query: 516 IHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEE 575
I + + +L++ AL I V F F P +A+ A L+ LGA+K L E+
Sbjct: 689 ITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQ 748
Query: 576 GKFLVKLGIEPRLGKLI 592
+ I P LG+++
Sbjct: 749 QAAKLSCPISP-LGRVM 764
Score = 265 (98.3 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 79/245 (32%), Positives = 120/245 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI Q I+ I I+V+ GETG GK+TQ+ QFL ++G + I+ T+PR++AA
Sbjct: 242 LPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGITEPRRVAA 301
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
+S++QRV +E + V+ Y + ++++ +MTD LL+ D LS+
Sbjct: 302 VSMSQRVAKEMNLSHR---VVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLLSKYKV 358
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXCRR----FDLRLVIMSATA---DAHQLSKYFYDCG- 334
II+DEAHERS R L+L+IMSAT D + ++ F
Sbjct: 359 IIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRLFAGTPP 418
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ V R FPV V + + + Y + R V ++H G IL FLT + EV
Sbjct: 419 VLQVDARQFPVTVHFNK-----KTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEVH 473
Query: 395 WACEK 399
C +
Sbjct: 474 SLCRR 478
Score = 85 (35.0 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 664 KWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKY---TEYDK-WLKEI 719
K+C EN + K++ + +L T + + L+ K TE +L++I
Sbjct: 862 KFCEENGLRYKAMLEIRRLRGQLTTAVNS----VCTDAGLYVDPKMKPPTEAQATYLRQI 917
Query: 720 ILSALAENVAMFSGYDQL-------GYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELL 772
+L+ L +++A ++L Y+ A+ V +HPS ++F Q P +VV+ E++
Sbjct: 918 VLAGLGDHLARRVQAEELLDDKWKNAYKTALLDDPVFIHPSS--VLFKQLPEFVVYQEIV 975
Query: 773 SVNNQYLVCVTAFDFDSLSTLCP 795
Y+ V+A + + + L P
Sbjct: 976 ETTKLYMKGVSAVEPEWIPALLP 998
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 352 (129.0 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 135/458 (29%), Positives = 213/458 (46%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKV 432
EG +L FL ++ + +F + + H LS +Q F PG RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKI 926
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 987 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1046
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN +LT G+ L L + ++GK+++ F G V LA
Sbjct: 1047 SNAMNLLRKIGACELNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1102
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1103 AVMTEKSPFTTPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIT 1159
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKE--LAIIIPSYWLWNPHKYT-EYDK--WLKEI 719
+C N +N SL +D +EL ++ + + W N T + + LK +
Sbjct: 1160 YCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQEIALLKAV 1219
Query: 720 ILSALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSCSLLIFGQKPTWVVFGELLS 773
+++ L +NV +++ + ++A T Q Q+HPS S+ Q W+++ E +
Sbjct: 1220 LVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPS-SVNRDLQTHGWLLYQEKIR 1278
Query: 774 VNNQYLVCVTAFDFDSLSTLCPSPLF--DVSMMERKKL 809
YL T L T P LF D+ + R++L
Sbjct: 1279 YARVYLRETT------LITPFPVLLFGGDIEVQHRERL 1310
Score = 302 (111.4 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 81/241 (33%), Positives = 134/241 (55%)
Query: 122 QNVAKKESYDA-NVDVFRFEDCQ--RFDWSRIQAFIVRECKRLEDG--LPIYMYRQDILR 176
+N+ E + A +++ ED + R + ++Q+ + K L++ LP++ +R I+
Sbjct: 525 ENLVSDEDFSALSLESANVEDLEPVRNLFRKLQS-TPKYQKLLKERQQLPVFKHRDSIVE 583
Query: 177 RIYGEQILVLIGETGCGKSTQLVQFLADSGI-----AAEQSIVCTQPRKIAAISLAQRVR 231
+ +++V+ GETG GKSTQ+ FL + + A++ +IVCTQPR+I+A+SLA RV
Sbjct: 584 TLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVC 643
Query: 232 EESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMNDRDLSRISCIIVD 286
+E GC + +C Y ++ +S +++Y T LL+ D LS +S +IVD
Sbjct: 644 DEL-GCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVD 702
Query: 287 EAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVD 346
E HERS +R DL L++MSAT D+ + S YF C I + GR++PV+
Sbjct: 703 EVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVE 762
Query: 347 V 347
V
Sbjct: 763 V 763
Score = 44 (20.5 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P V LFG E++H E R L++D
Sbjct: 1290 ITPFPVLLFGGDIEVQHRE---RLLSID 1314
Score = 42 (19.8 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ E L + + + L +L+NK LK + +
Sbjct: 470 SDAEKKREELNKMETNKPRDLFIAKLLNK-LKQQQQQ 505
Score = 37 (18.1 bits), Expect = 9.2e-52, Sum P(4) = 9.2e-52
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 117 YLDDPQNVAKKESYDANVDV 136
Y +DP++ KKE + V++
Sbjct: 210 YEEDPKSKPKKEEKNMEVNM 229
Score = 37 (18.1 bits), Expect = 9.2e-52, Sum P(4) = 9.2e-52
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 74 LGSRNSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLDDPQ-NVAKKESYDA 132
L ++ A F +L + K+G KE + ++R+F+ M L+ D P N A K S+
Sbjct: 272 LDAKEQAATF-KLEKNKQGQ-KEAQ---EKIRKFQREME-TLE--DHPVFNPAMKISHQQ 323
Query: 133 N 133
N
Sbjct: 324 N 324
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 385 (140.6 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 127/457 (27%), Positives = 222/457 (48%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVF-KS 425
+V + G+ EK +L + ++ ++ + + LP +G ++ D+Q +F
Sbjct: 199 LVFLTGQFEI-EKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP 257
Query: 426 YPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
PG RK + +TN++ TSLTI G+++V+D G VK+ P G+++L V +S+S A QR+
Sbjct: 258 PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRS 317
Query: 486 GRAGRTEPGRCYRLYSKSDF--ETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFID 543
GRAGRT G+C+R+YSK DF + P + PEI R L VL + L I DV F ++D
Sbjct: 318 GRAGRTSSGKCFRIYSK-DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLD 376
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGRE 603
P+ + I A++ L Q AI + V L G +V+ + P L ++ L E
Sbjct: 377 PPNERLILEALKQLYQCDAIDRSGHVTRL---GLSMVEFPLPPHLTCAVIKA--ASLDCE 431
Query: 604 GLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG---DLFTLLSVYREWDSLPR 659
L+L A M + ++F R + + +A+ + + G D TL ++ + S
Sbjct: 432 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 491
Query: 660 EERNKWCWENSVNAKSLR---RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWL 716
WC ++ ++ + L R + ++EL L+++ P P K+ + L
Sbjct: 492 PA--SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDF--PKETFEGP-KH----EVL 542
Query: 717 KEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
+ + + +NVA S + + G V +HPS +L K W++F E+L
Sbjct: 543 RRCLCAGYFKNVARRS-VGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTK 601
Query: 777 QY--LVCVTAFDF--DSLSTLCPSPLFDVSMMERKKL 809
Y +VC +++ D L L D+S + R+++
Sbjct: 602 VYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREV 638
Score = 240 (89.5 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 58/192 (30%), Positives = 99/192 (51%)
Query: 217 QPRKIAAISLAQRVREESRGC--YEDDSVICYPSFSSAQHF---DSKVIYMTDHCLLQHF 271
Q +++A+ +A R E +GC E + +P + ++ + YMTD CLL+H
Sbjct: 25 QEERLSAVCIADR---EEKGCTSQEGGTTPTFPIQKQRKKIIQAETAIKYMTDGCLLKHI 81
Query: 272 MNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXC-----RRFDLRLVIMSATADAHQL 326
+ D +L++ S II+DEAHER+ R+ L++V+MSAT + +L
Sbjct: 82 LGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKL 141
Query: 327 SKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAF 386
S +F +C I + GR +PV ++ +Y+ +V++ ++H E G IL F
Sbjct: 142 SAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVF 201
Query: 387 LTSKMEVEWACE 398
LT + E+E +CE
Sbjct: 202 LTGQFEIEKSCE 213
Score = 49 (22.3 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1131 PKRNSHANCCRVQVFPPEPKDAFMKAFITFDGR---LHLEAAKALEQLEGKV 1179
PK C F + + + F T DGR +H+ + AL + E K+
Sbjct: 537 PKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 588
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 347 (127.2 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 110/336 (32%), Positives = 166/336 (49%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G IL FL E++ E+ + S V P H LS +EQ VF P G
Sbjct: 800 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVT 859
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ G GM L VSQ++A QR GRAGR
Sbjct: 860 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 919
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGI---RDVQG-FD-FIDA 544
G C+ L++ + + L Q+ PEI RV L LRI L + ++Q F I+
Sbjct: 920 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 979
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P ++ + L LGA+ + +LT G L L ++ R+GKL+L R
Sbjct: 980 PHVDSLRASKVRLRDLGALTPDE---KLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPA 1036
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN- 663
L +AA +A S V D+K +A+ K++F N D LL Y+ W +E
Sbjct: 1037 LTIAASLAFKSPF---VSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARA 1093
Query: 664 --KWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
+C +N ++ ++L+ ++K T L ++ +
Sbjct: 1094 SYNYCRQNFLSGRTLQEMA-SLKRQFTELLSDIGFV 1128
Score = 295 (108.9 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 75/214 (35%), Positives = 118/214 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA--EQ--SIVCTQPRK 220
LP + R+ IL+ + Q++V+ G TGCGK+TQ+ QF+ D+ + E+ +I+CTQPR+
Sbjct: 495 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRR 554
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+AIS+A+RV +E R +V S + ++++Y T LL+ D L +
Sbjct: 555 ISAISVAERVAKE-RAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGV 613
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
+ IIVDE HER+ +R L++++MSAT DA SKYF C + + G
Sbjct: 614 THIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPG 673
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEV 374
R FPVD ++ A A T V S +R + ++
Sbjct: 674 RAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQI 707
Score = 48 (22.0 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK A +K F+T DG +H+ + Q+ P +K+K ++F S SVY
Sbjct: 1198 QPKSAELK-FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM-VSVY 1255
Query: 1207 SVI 1209
++
Sbjct: 1256 PLV 1258
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 340 (124.7 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 79/161 (49%), Positives = 105/161 (65%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP + L+ ++Q VFK P G R + ATNVAETSLTIPG+K+V+D G VK+ Y++ T
Sbjct: 378 LPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVT 437
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKS---DFETRPLNQEPEIHRVHLGI 523
G++ RV VSQ+SA+QRAGRAGRTEPG CYRLYS + DFE P PEI R +
Sbjct: 438 GVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFP---PPEITRRPVED 494
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+L++ AL + V F F PS +A+ A L+ LGA++
Sbjct: 495 LILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQ 535
Score = 267 (99.0 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 78/245 (31%), Positives = 120/245 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI Q I+ + I+++ GETG GK+TQ+ QFL ++G ++E SI+ T+PR++AA
Sbjct: 39 LPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAA 98
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
++++QRV +E V+ Y + ++++ +MTD LL+ D L R
Sbjct: 99 VAMSQRVAKEMN---LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKV 155
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXC----RRFDLRLVIMSATA---DAHQLSKYFYDCG- 334
+I+DEAHERS R L+L+IMSAT D Q + F
Sbjct: 156 VIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPP 215
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ V R FPV V + + + Y + R V ++H G IL FLT + EV
Sbjct: 216 VIKVESRQFPVTVHFNK-----RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 270
Query: 395 WACEK 399
C +
Sbjct: 271 ALCRR 275
Score = 76 (31.8 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 41/176 (23%), Positives = 77/176 (43%)
Query: 642 GDLFTLLSVYR--EWDSLPRE--ERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
GDL LL E+ S + E N ++ + + LR Q T C E EL +
Sbjct: 640 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRG-QLTTAVNAVCPEAEL-FV 697
Query: 698 IPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQL-------GYEVAMTGQHVQL 750
P P ++ +L++I+ + L +++A +++ Y+ + V +
Sbjct: 698 DPKM---QPPTESQVT-YLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFI 753
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPL-FDVSMME 805
HPS ++F + P +VV+ E++ Y+ V++ + + L PS FD + E
Sbjct: 754 HPSS--VLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEE 807
Score = 40 (19.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 1166 LEAAKALEQLEGKVLPGCGPWQKM-KCQQLFHSSLSCP 1202
+EA A E+L L P QK + +QL + LSCP
Sbjct: 518 VEALLAAEELL-IALGALQPPQKAERVKQLQENRLSCP 554
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 347 (127.2 bits), Expect = 5.1e-52, Sum P(3) = 5.1e-52
Identities = 110/336 (32%), Positives = 166/336 (49%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G IL FL E++ E+ + S V P H LS +EQ VF P G
Sbjct: 853 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVT 912
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ G GM L VSQ++A QR GRAGR
Sbjct: 913 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 972
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGI---RDVQG-FD-FIDA 544
G C+ L++ + + L Q+ PEI RV L LRI L + ++Q F I+
Sbjct: 973 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 1032
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P ++ + L LGA+ + +LT G L L ++ R+GKL+L R
Sbjct: 1033 PHVDSLRASKVRLRDLGALTPDE---KLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPA 1089
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN- 663
L +AA +A S V D+K +A+ K++F N D LL Y+ W +E
Sbjct: 1090 LTIAASLAFKSPF---VSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARA 1146
Query: 664 --KWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
+C +N ++ ++L+ ++K T L ++ +
Sbjct: 1147 SYNYCRQNFLSGRTLQEMA-SLKRQFTELLSDIGFV 1181
Score = 295 (108.9 bits), Expect = 5.1e-52, Sum P(3) = 5.1e-52
Identities = 75/214 (35%), Positives = 118/214 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA--EQ--SIVCTQPRK 220
LP + R+ IL+ + Q++V+ G TGCGK+TQ+ QF+ D+ + E+ +I+CTQPR+
Sbjct: 548 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRR 607
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+AIS+A+RV +E R +V S + ++++Y T LL+ D L +
Sbjct: 608 ISAISVAERVAKE-RAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGV 666
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
+ IIVDE HER+ +R L++++MSAT DA SKYF C + + G
Sbjct: 667 THIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPG 726
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEV 374
R FPVD ++ A A T V S +R + ++
Sbjct: 727 RAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQI 760
Score = 48 (22.0 bits), Expect = 5.1e-52, Sum P(3) = 5.1e-52
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK A +K F+T DG +H+ + Q+ P +K+K ++F S SVY
Sbjct: 1251 QPKSAELK-FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM-VSVY 1308
Query: 1207 SVI 1209
++
Sbjct: 1309 PLV 1311
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 345 (126.5 bits), Expect = 8.3e-52, Sum P(3) = 8.3e-52
Identities = 109/336 (32%), Positives = 166/336 (49%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G +L FL E++ E+ + S V P H LS +EQ VF P G
Sbjct: 850 GAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVT 909
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ G GM L VSQ++A QR GRAGR
Sbjct: 910 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGR 969
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGI---RDVQG-FD-FIDA 544
G C+ L++ + + L Q+ PEI RV L LRI L + ++Q F I+
Sbjct: 970 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 1029
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P ++ + L LGA+ + +LT G L L ++ R+GKL+L R
Sbjct: 1030 PHIDSLRASKVRLRDLGALTPDE---KLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPA 1086
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN- 663
L +AA +A S V D+K +A+ K++F N D LL Y+ W +E
Sbjct: 1087 LTIAASLAFKSPF---VSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARA 1143
Query: 664 --KWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
+C +N ++ ++L+ ++K T L ++ +
Sbjct: 1144 SYNYCRQNFLSGRTLQEMA-SLKRQFTELLSDIGFV 1178
Score = 295 (108.9 bits), Expect = 8.3e-52, Sum P(3) = 8.3e-52
Identities = 75/214 (35%), Positives = 118/214 (55%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA--EQ--SIVCTQPRK 220
LP + R+ IL+ + Q++V+ G TGCGK+TQ+ QF+ D+ + E+ +I+CTQPR+
Sbjct: 545 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANIICTQPRR 604
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+AIS+A+RV +E R +V S + ++++Y T LL+ D L +
Sbjct: 605 ISAISVAERVAKE-RAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGV 663
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
+ IIVDE HER+ +R L++++MSAT DA SKYF C + + G
Sbjct: 664 THIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPG 723
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEV 374
R FPVD ++ A A T V S +R + ++
Sbjct: 724 RAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQI 757
Score = 48 (22.0 bits), Expect = 8.3e-52, Sum P(3) = 8.3e-52
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK A +K F+T DG +H+ + Q+ P +K+K ++F S SVY
Sbjct: 1248 QPKSAELK-FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM-VSVY 1305
Query: 1207 SVI 1209
++
Sbjct: 1306 PLV 1308
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 571 (206.1 bits), Expect = 8.7e-52, P = 8.7e-52
Identities = 165/514 (32%), Positives = 262/514 (50%)
Query: 211 QSIVCTQPRKIAAISLAQRVREESRGCY--EDDSVICYPSFSSAQHFDSKVIYMTDHCLL 268
+SIV TQPR++AAIS+A+RV E + E I + + ++ +K+ ++TD LL
Sbjct: 398 KSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSEC--TKLKFVTDGILL 455
Query: 269 QHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSK 328
+ + D L + SC+I+DEAHERS RR DL+L+I SAT +A + S
Sbjct: 456 RETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSA 515
Query: 329 YFYDCGISHVVGRNFPVDVRYV--PCATAGTSAVASYVS----------DV-VRMVGEVH 375
+F + + GR FPV Y P +AV+ V D+ + M G+
Sbjct: 516 FFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQED 575
Query: 376 TTEKEGTILAFLTSKMEVEWACEKFDAPSAVA-LPFHGQLSFDEQFCVFKSYPG-RRKVI 433
T+ ++ F+ + + LP + L D QF +F+ G +RK+I
Sbjct: 576 IETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKII 635
Query: 434 FATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEP 493
ATN+AETSLTI G+++VID G K + P G++ L + +S+++A+QR+GRAGRT P
Sbjct: 636 IATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAP 695
Query: 494 GRCYRLYSKSDF-ETRPLNQEPEIHRVHLGIAVLRILALGIRD-VQGFDFIDAPSAKAIE 551
G YRLY++ F E L PEI R +L +L + +L + D + F FID P +
Sbjct: 696 GTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFL 755
Query: 552 MAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVM 611
++ L +GAI + +LT G + K ++P L K++L R E L + + M
Sbjct: 756 SSLYELWFIGAIDTSG---QLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVS-M 811
Query: 612 ANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSV 671
+ +F R + +K +AD + +F D TLL+V+ +W + + WC ++ V
Sbjct: 812 LSVPQVFYRP-KERQK-EADIARNKFFIAKSDHLTLLNVFEQWRA--NNFSSHWCNKHFV 867
Query: 672 NAKSLRRCQDTIKELETCLEKELAIIIPSYWLWN 705
KSL R +D +L T L+ + +I S W+
Sbjct: 868 QYKSLVRARDIRDQLLTILKSQKIPVISSGKDWD 901
Score = 333 (122.3 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 85/244 (34%), Positives = 131/244 (53%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ--SIV 214
+ K ++ LP++ R +L I Q++V+IGETG GK+TQL Q+L + G A ++ SIV
Sbjct: 342 DIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIV 401
Query: 215 CTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFD-SKVIYMTDHCLLQHFM 272
TQPR++AAIS+A+RV E + + + Y F + +K+ ++TD LL+ +
Sbjct: 402 VTQPRRVAAISVAKRVAMEMQVPLGKE--VGYSIRFEDVTDSECTKLKFVTDGILLRETL 459
Query: 273 NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD 332
D L + SC+I+DEAHERS RR DL+L+I SAT +A + S +F +
Sbjct: 460 LDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGN 519
Query: 333 CGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTE--KEGTILAFLTSK 390
+ GR FPV Y ++ V YV V ++H G IL F+T +
Sbjct: 520 APQFTIPGRTFPVQTIYT------SNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQ 573
Query: 391 MEVE 394
++E
Sbjct: 574 EDIE 577
Score = 213 (80.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 65/216 (30%), Positives = 104/216 (48%)
Query: 571 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 630
+LT G + K ++P L K++L R E L + + M + +F R + +K +A
Sbjct: 772 QLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVS-MLSVPQVFYRP-KERQK-EA 828
Query: 631 DCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCL 690
D + +F D TLL+V+ +W + + WC ++ V KSL R +D +L T L
Sbjct: 829 DIARNKFFIAKSDHLTLLNVFEQWRA--NNFSSHWCNKHFVQYKSLVRARDIRDQLLTIL 886
Query: 691 EKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 750
+ + +I S W+ +K+ I S A A +G Y TG VQL
Sbjct: 887 KSQKIPVISSGKDWDI---------IKKCICSGFAHQAAKITGLRN--YVHLKTGVSVQL 935
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFD 786
HP+ +L G P +VV+ ELL + +Y+ CVT+ D
Sbjct: 936 HPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVD 971
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 328 (120.5 bits), Expect = 8.9e-52, Sum P(2) = 8.9e-52
Identities = 77/194 (39%), Positives = 115/194 (59%)
Query: 427 PGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAG 486
PG RK I +TN+AETS+TI G++FV+DSG VKE ++P + L+ +SQ+SA QR G
Sbjct: 346 PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKG 405
Query: 487 RAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPS 546
RAGRT PG C+RLY++SD++ PEI RV L VL++ ++ + D + F FI+ P
Sbjct: 406 RAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPP 465
Query: 547 AKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV 606
++E AI L GA+ + LT G L +L ++ +GK+++ L L
Sbjct: 466 PASLETAILYLRDQGALDSSEA---LTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLT 522
Query: 607 LAAVMANASSIFCR 620
+AA ++ S F R
Sbjct: 523 IAAALS-VQSPFTR 535
Score = 292 (107.8 bits), Expect = 8.9e-52, Sum P(2) = 8.9e-52
Identities = 81/234 (34%), Positives = 120/234 (51%)
Query: 146 DWSRIQAF-IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD 204
D+ + QAF + + +R LPI Y IL+ + Q++V+ G+TGCGKSTQ+ Q+L
Sbjct: 142 DFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLA 201
Query: 205 SGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMT 263
+G + + CTQPR+IA ISLA+RV ES Y S + Y F S + +K++++T
Sbjct: 202 AGFS---HVACTQPRRIACISLAKRVGFESLSQY--GSQVGYQIRFESTRSAATKIVFLT 256
Query: 264 DHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADA 323
LL+ + L + +IVDE HER R DL++++MSAT +
Sbjct: 257 VGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINI 316
Query: 324 HQLSKYFYDCGISHVVGRNFPVDVRYV-P-----CATAGTSAVASYVSDVVRMV 371
S YF + + V GR FP+ V V P C + A S D +R V
Sbjct: 317 SLFSSYFSNAPVVQVPGRLFPITVFDVAPPGVRKCILSTNIAETSVTIDGIRFV 370
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 342 (125.4 bits), Expect = 9.3e-52, Sum P(3) = 9.3e-52
Identities = 80/161 (49%), Positives = 105/161 (65%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP + L+ ++Q VFK P G R + ATNVAETSLTIPG+K+V+D G VK+ Y++ T
Sbjct: 584 LPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRVT 643
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKS---DFETRPLNQEPEIHRVHLGI 523
G++ RV VSQ+SA+QRAGRAGRTEPG CYRLYS + DFE P PEI R +
Sbjct: 644 GVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFP---PPEITRRPVED 700
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+L++ AL I V F F PS +A+ A L+ LGA++
Sbjct: 701 LILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 741
Score = 266 (98.7 bits), Expect = 9.3e-52, Sum P(3) = 9.3e-52
Identities = 77/245 (31%), Positives = 121/245 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI Q I+ + I+++ GETG GK+TQ+ QFL ++G ++E SI+ T+PR++AA
Sbjct: 248 LPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVTEPRRVAA 307
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
++++QRV +E + V+ Y + ++++ +MTD LL+ D L +
Sbjct: 308 VAMSQRVAKEMNLSHR---VVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKV 364
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXC----RRFDLRLVIMSATA---DAHQLSKYFYDCG- 334
+I+DEAHERS R L+L+IMSAT D Q + F
Sbjct: 365 VIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPP 424
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ V R FPV V + + + Y + R V ++H G IL FLT + EV
Sbjct: 425 VIKVESRQFPVTVHFNK-----RTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 479
Query: 395 WACEK 399
C +
Sbjct: 480 ALCRR 484
Score = 76 (31.8 bits), Expect = 9.3e-52, Sum P(3) = 9.3e-52
Identities = 35/154 (22%), Positives = 68/154 (44%)
Query: 664 KWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKY---TEYD-KWLKEI 719
++C N + K++ I+ L L + + P L+ K TE +L++I
Sbjct: 866 QFCQANGLRYKAMLE----IRRLRGQLTTAVNAVCPEAGLFLDPKMQPPTESQVTYLRQI 921
Query: 720 ILSALAENVAM-FSGYDQL------GYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELL 772
+ + L +++A D L Y+ + V +HPS ++F + P +VV+ E++
Sbjct: 922 MAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDPVFIHPSS--VLFRELPEFVVYQEIV 979
Query: 773 SVNNQYLVCVTAFDFDSLSTLCPSPL-FDVSMME 805
Y+ V+ + + +L PS FD + E
Sbjct: 980 ETTKMYMKGVSTVEIQWIPSLLPSYCQFDAPLEE 1013
Score = 40 (19.1 bits), Expect = 5.3e-48, Sum P(3) = 5.3e-48
Identities = 33/126 (26%), Positives = 53/126 (42%)
Query: 610 VMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLS-VYREWDSLPREERNKWCWE 668
V+ + +S+F RVG ++ D + ++ F L V+R+ S K C
Sbjct: 1025 VLCHRASVFYRVGWPLPAVQVDFPEGIDRYKYFARFLLEGQVFRKLASF------KSCLL 1078
Query: 669 NSVNA--KSLRRCQDTIKELETCLEKELAIIIPSY---WLWNPHKY--TEYDKWLKEIIL 721
+S N K+ R Q + L L + A S W NP KY EY +WL + +
Sbjct: 1079 SSPNTMLKTWARLQPRTETLLRALVAQKADSRDSLLAAWKKNP-KYLLAEYCEWLPKAMH 1137
Query: 722 SALAEN 727
+ +N
Sbjct: 1138 GDVEKN 1143
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 339 (124.4 bits), Expect = 9.6e-52, Sum P(3) = 9.6e-52
Identities = 83/172 (48%), Positives = 110/172 (63%)
Query: 398 EKFDAPSAV-ALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSG 455
EK DA + LP + L+ ++Q VF+ P G R + ATNVAETSLTIPG+K+V+D G
Sbjct: 574 EKPDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCG 633
Query: 456 MVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK---SDFETRPLNQ 512
VK+ +++ TG++ RV VSQ+SA+QRAGRAGRTEPG CYRLYS SDFE P
Sbjct: 634 KVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFP--- 690
Query: 513 EPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
PEI R + +L++ AL I V F F PS +A+ A L+ LGA++
Sbjct: 691 PPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 742
Score = 263 (97.6 bits), Expect = 9.6e-52, Sum P(3) = 9.6e-52
Identities = 76/245 (31%), Positives = 120/245 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI Q I+ + I+++ GETG GK+TQ+ QFL ++G +++ SI+ T+PR++AA
Sbjct: 246 LPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGITEPRRVAA 305
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
++++QRV +E V+ Y + ++++ +MTD LL+ D L R
Sbjct: 306 VAMSQRVAKEMN---LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKV 362
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXC----RRFDLRLVIMSATA---DAHQLSKYF-YDCG 334
+++DEAHERS R L+L+IMSAT D Q + F
Sbjct: 363 VLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPP 422
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ V R FPV V + + + Y + R V ++H G IL FLT + EV
Sbjct: 423 VIKVESRQFPVTVHFNK-----RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 477
Query: 395 WACEK 399
C +
Sbjct: 478 ALCRR 482
Score = 82 (33.9 bits), Expect = 9.6e-52, Sum P(3) = 9.6e-52
Identities = 39/176 (22%), Positives = 75/176 (42%)
Query: 642 GDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSY 701
GD+ LL + R + +C N + K++ I+ L L + + P
Sbjct: 847 GDIMVLLGAVGACEYSGRSPQ--FCEANGLRYKAMME----IRRLRGQLTTAVNTVCPEA 900
Query: 702 WLW-NPHKYTEYDK---WLKEIILSALAENVAM-FSGYDQL------GYEVAMTGQHVQL 750
L+ +P + +L++I+ + L +++A D L Y+ + V +
Sbjct: 901 GLFMDPKMQPPSESQVTYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVFI 960
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPL-FDVSMME 805
HPS ++F + P +VV+ E++ Y+ V+A + + L PS FD + E
Sbjct: 961 HPSS--VLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLLPSYCQFDKPLEE 1014
Score = 60 (26.2 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 33/119 (27%), Positives = 49/119 (41%)
Query: 610 VMANASSIFCRVGSDDEKIKADCLKVQFCHRN-------GDLFTLLSVYREWD-SLPREE 661
V+ + +S+F RVG ++ D + C+++ G +F L+ YR S P
Sbjct: 1026 VLCHRASVFYRVGWPLPAVQVDFPEGIDCYKHFARFLLEGQVFQKLASYRGCLLSSPSTM 1085
Query: 662 RNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKY--TEYDKWLKE 718
W +SL + + E C E LA W NP KY EY +WL E
Sbjct: 1086 LKTWA-RLQPRTESLLKA--LVAEQANCREALLAA-----WTKNP-KYLLAEYCQWLPE 1135
Score = 41 (19.5 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 780 VCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGS 819
+CV A + S P + V + KK H +TG S
Sbjct: 609 LCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSS 648
Score = 38 (18.4 bits), Expect = 3.8e-47, Sum P(3) = 3.8e-47
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1078 LDKELSEDEILGELRKVTTR 1097
LD+ + DE LG+L+ R
Sbjct: 810 LDRPAASDEELGQLKDKRAR 829
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 538 (194.4 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 128/404 (31%), Positives = 220/404 (54%)
Query: 312 LRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRY---VPCATAGTSAVASYVSDVV 368
L+++IMSAT DA S+YF + + ++ GR FPV + Y + + + +
Sbjct: 222 LKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIA 281
Query: 369 RMVGE-VHTTEKE--GTILAFLTSKMEVEWACEKF----------DAPSAVALPFHGQLS 415
+ + ++ E+E G IL FLT + E+E EK + + P L
Sbjct: 282 HLTDKSINKEEEEDGGDILVFLTGRDEIE-NLEKLLLDRIPRLPVGSKDLIVCPIFSALP 340
Query: 416 FDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVC 474
++Q VF+ P G RKVI ATN+AETSLTI G+++V+DSG VK F P G++ L +
Sbjct: 341 QEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNII 400
Query: 475 RVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIR 534
+S++SA QR GRAGR G+CYRLY++ FE + PEI R ++ +L++ +GI
Sbjct: 401 PISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGIN 460
Query: 535 DVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILS 594
D+ FDF+++P ++ ++ L L AI +NG LTE GK + ++P K ++
Sbjct: 461 DILSFDFLESPPVASVIKSLELLFCLDAIS-DNG--SLTELGKKMALFPLDPMYSKTLIK 517
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREW 654
E L++ ++++ SIF ++++ D K+ F +GD T L+V+RE+
Sbjct: 518 SIEFECSEEVLIIISILS-VESIFFTPKEKKKEVE-DVKKI-FFSPDGDHITFLNVFREF 574
Query: 655 DSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCLEKELAII 697
+++ +WC+++ +N KS+ + + ++L + C+ +L I+
Sbjct: 575 QKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIV 618
Score = 317 (116.6 bits), Expect = 4.0e-37, Sum P(3) = 4.0e-37
Identities = 80/250 (32%), Positives = 131/250 (52%)
Query: 154 IVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSI 213
I +E K ++ LP++ + +L+ +++I ETG GK+TQ+ Q+L ++G I
Sbjct: 62 IPKEIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGII 121
Query: 214 VCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 273
TQPR++AA+S+++RV +E G D V F + +K+ YMTD L++ M
Sbjct: 122 AITQPRRVAAVSISKRVSQEM-GVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAML 180
Query: 274 DRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD---LRLVIMSATADAHQLSKYF 330
D LS+ S II+DEAHER+ RR L+++IMSAT DA S+YF
Sbjct: 181 DSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYF 240
Query: 331 YDCGISHVVGRNFPVDVRY---VPCATAGTSAVASYVSDVVRMVGE-VHTTEKE--GTIL 384
+ + ++ GR FPV + Y + + + + + + ++ E+E G IL
Sbjct: 241 NNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDIL 300
Query: 385 AFLTSKMEVE 394
FLT + E+E
Sbjct: 301 VFLTGRDEIE 310
Score = 180 (68.4 bits), Expect = 4.0e-37, Sum P(3) = 4.0e-37
Identities = 50/225 (22%), Positives = 110/225 (48%)
Query: 572 LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKAD 631
LTE GK + ++P K ++ E L++ ++++ SIF ++++ D
Sbjct: 495 LTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILS-VESIFFTPKEKKKEVE-D 552
Query: 632 CLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ETCL 690
K+ F +GD T L+V+RE+ +++ +WC+++ +N KS+ + + ++L + C+
Sbjct: 553 VKKI-FFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCI 611
Query: 691 EKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQL 750
+L I+ +++D+ +K+ + N A+ D+ Y+ + + +Q+
Sbjct: 612 SLKLPIVSCG---------SDFDR-IKKSFIGGFFLNTAILQP-DKK-YKTMVDNKEIQI 659
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCP 795
HP+ L F QKP +++ EL + + + L+ +CP
Sbjct: 660 HPTSFL--FDQKPQHILYNELTITTKAFARNIIPIEGSWLAEICP 702
Score = 44 (20.5 bits), Expect = 4.8e-23, Sum P(3) = 4.8e-23
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 1085 DEILGELRKVTTRRIRDLFLVRGDAVECPQFDAFEEALLREISRFMPK 1132
DEI L K+ RI L + D + CP F A + ++ PK
Sbjct: 307 DEI-ENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPK 353
Score = 39 (18.8 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 846 DERIGIEVNVDQNQILLFASSQD-IEEVLGLVSD 878
D+ I E D IL+F + +D IE + L+ D
Sbjct: 285 DKSINKEEEEDGGDILVFLTGRDEIENLEKLLLD 318
Score = 37 (18.1 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 8/49 (16%), Positives = 24/49 (48%)
Query: 58 KMKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVRE 106
++ +DK ++ N+ N+L +L + +F ++ +++ +E
Sbjct: 40 QISNDKINDNNNLKNQLEIPKEIPKEIKLQKESLPVFTAKDALLKNFKE 88
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 340 (124.7 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 79/161 (49%), Positives = 105/161 (65%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP + L+ ++Q VFK P G R + ATNVAETSLTIPG+K+V+D G VK+ Y++ T
Sbjct: 591 LPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVT 650
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKS---DFETRPLNQEPEIHRVHLGI 523
G++ RV VSQ+SA+QRAGRAGRTEPG CYRLYS + DFE P PEI R +
Sbjct: 651 GVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFP---PPEITRRPVED 707
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+L++ AL + V F F PS +A+ A L+ LGA++
Sbjct: 708 LILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQ 748
Score = 267 (99.0 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 78/245 (31%), Positives = 120/245 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI Q I+ + I+++ GETG GK+TQ+ QFL ++G ++E SI+ T+PR++AA
Sbjct: 252 LPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAA 311
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
++++QRV +E V+ Y + ++++ +MTD LL+ D L R
Sbjct: 312 VAMSQRVAKEMN---LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKV 368
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXC----RRFDLRLVIMSATA---DAHQLSKYFYDCG- 334
+I+DEAHERS R L+L+IMSAT D Q + F
Sbjct: 369 VIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPP 428
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ V R FPV V + + + Y + R V ++H G IL FLT + EV
Sbjct: 429 VIKVESRQFPVTVHFNK-----RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 483
Query: 395 WACEK 399
C +
Sbjct: 484 ALCRR 488
Score = 76 (31.8 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 41/176 (23%), Positives = 77/176 (43%)
Query: 642 GDLFTLLSVYR--EWDSLPRE--ERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
GDL LL E+ S + E N ++ + + LR Q T C E EL +
Sbjct: 853 GDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRG-QLTTAVNAVCPEAEL-FV 910
Query: 698 IPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQL-------GYEVAMTGQHVQL 750
P P ++ +L++I+ + L +++A +++ Y+ + V +
Sbjct: 911 DPKM---QPPTESQVT-YLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFI 966
Query: 751 HPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPL-FDVSMME 805
HPS ++F + P +VV+ E++ Y+ V++ + + L PS FD + E
Sbjct: 967 HPSS--VLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEE 1020
Score = 51 (23.0 bits), Expect = 5.1e-49, Sum P(3) = 5.1e-49
Identities = 34/119 (28%), Positives = 48/119 (40%)
Query: 610 VMANASSIFCRVGSDDEKIKADCLKV--QFCH-----RNGDLFTLLSVYREWD-SLPREE 661
V+ + +S+F RVG I+ D + ++ H G +F L+ YR S P
Sbjct: 1032 VLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLLEGQVFRKLASYRSCLLSSPGTM 1091
Query: 662 RNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKY--TEYDKWLKE 718
W +SL R + E C E LA W NP KY EY +WL +
Sbjct: 1092 LKTWA-RLQPRTESLLRA--LVAEKADCHEALLAA-----WKKNP-KYLLAEYCEWLPQ 1141
Score = 40 (19.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 1166 LEAAKALEQLEGKVLPGCGPWQKM-KCQQLFHSSLSCP 1202
+EA A E+L L P QK + +QL + LSCP
Sbjct: 731 VEALLAAEELL-IALGALQPPQKAERVKQLQENRLSCP 767
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 339 (124.4 bits), Expect = 1.8e-51, Sum P(3) = 1.8e-51
Identities = 110/336 (32%), Positives = 164/336 (48%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G IL FL E++ E+ + S V P H LS +EQ VF P G
Sbjct: 844 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGVT 903
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ GM L VSQ++A QR GRAGR
Sbjct: 904 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 963
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGI---RDVQG-FD-FIDA 544
G C+ L++ F + L Q+ PEI RV L LRI L + ++Q F I+
Sbjct: 964 VASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 1023
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P ++ + L LGA+ + +LT G L L ++ R+GKL+L R
Sbjct: 1024 PHTDSLRASKIRLRDLGALTPDE---KLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPA 1080
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN- 663
L +AA +A S V D+K +A+ K++F N D LL Y+ W +E
Sbjct: 1081 LTIAASLAFKSPF---VSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRA 1137
Query: 664 --KWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
+C +N ++ + L+ ++K T L ++ +
Sbjct: 1138 SYNYCRQNFLSGRVLQEMA-SLKRQFTELLSDIGFV 1172
Score = 303 (111.7 bits), Expect = 1.8e-51, Sum P(3) = 1.8e-51
Identities = 86/272 (31%), Positives = 144/272 (52%)
Query: 117 YLDDPQNVAKKESYDA-NVDVFRFEDCQRF---DWSRIQAFIVRECKRLEDGLPIYMYRQ 172
Y++ + ++K+ + A +V + C++F SR I++E LP + R+
Sbjct: 492 YVNLKKKISKRYDWQAKSVYAENAKICKQFRIKQASRQFQSILQE----RQSLPAWEERE 547
Query: 173 DILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA--EQ--SIVCTQPRKIAAISLAQ 228
IL+ + Q+LV+ G TGCGK+TQ+ QF+ D ++ E+ +I+CTQPR+I+AIS+A+
Sbjct: 548 TILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAE 607
Query: 229 RVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDE 287
RV +E + Y S + ++++Y T LL+ D L ++ IIVDE
Sbjct: 608 RVAKERTE--RVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDE 665
Query: 288 AHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDV 347
HER+ +R +L++++MSAT +A S+YF C + + GR FPVD
Sbjct: 666 VHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQ 725
Query: 348 RYVPCATAGTSAVASYVSDVVRMVGEVHTTEK 379
++ A A T V S +R + ++ T EK
Sbjct: 726 FFLEDAIAVTRYVLQDGSPYMRSMKQM-TKEK 756
Score = 43 (20.2 bits), Expect = 1.8e-51, Sum P(3) = 1.8e-51
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK +K F+T DG +H+ + Q+ P +K+K ++F S SVY
Sbjct: 1242 QPKSDELK-FVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSM-VSVY 1299
Query: 1207 SVI 1209
++
Sbjct: 1300 PLV 1302
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 333 (122.3 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 78/161 (48%), Positives = 105/161 (65%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP + L+ ++Q VF+ P G R + ATNVAETSLTIPG+K+V+D G VK+ +++ T
Sbjct: 589 LPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVT 648
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKS---DFETRPLNQEPEIHRVHLGI 523
G++ RV VSQ+SA+QRAGRAGRTEPG CYRLYS + DFE P PEI R +
Sbjct: 649 GVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYP---PPEITRRPVED 705
Query: 524 AVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
+L++ AL I V F F PS +A+ A L+ LGA++
Sbjct: 706 LILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQ 746
Score = 271 (100.5 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 76/245 (31%), Positives = 121/245 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAA 223
LPI Q I+ + I+++ GETG GK+TQ+ QFL ++G +++ S++ T+PR++AA
Sbjct: 250 LPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVTEPRRVAA 309
Query: 224 ISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 282
++++QRV +E V+ Y + ++++ +MTD LL+ D L +
Sbjct: 310 VAMSQRVAKEMN---LSPRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKV 366
Query: 283 IIVDEAHERSXXXXXXXXXXXXXXC----RRFDLRLVIMSATA---DAHQLSKYFYDCG- 334
+I+DEAHERS C R L+L+IMSAT D Q + F
Sbjct: 367 VIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLFTQPPP 426
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
+ V R FPV V + + + Y + R V ++H G IL FLT + EV
Sbjct: 427 VIKVESRQFPVTVHFNK-----RTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 481
Query: 395 WACEK 399
C +
Sbjct: 482 ALCRR 486
Score = 77 (32.2 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 715 WLKEIILSALAENVAMFSGYDQL-------GYEVAMTGQHVQLHPSCSLLIFGQKPTWVV 767
+L++I+ + L +++A + L Y+ + V +HPS ++F + P +VV
Sbjct: 922 YLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSS--VLFKELPEFVV 979
Query: 768 FGELLSVNNQYLVCVTAFDFDSLSTLCPSPL-FDVSMME 805
+ E++ Y+ V+ D + L PS FD + E
Sbjct: 980 YQEIVETTKMYMKGVSTVDMQWIPVLLPSYCQFDKPLEE 1018
Score = 41 (19.5 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 780 VCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGS 819
+CV A + S P + V + KK H +TG S
Sbjct: 613 LCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRVTGVSS 652
Score = 37 (18.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1166 LEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCP 1202
+EA A E+L + P + + +QL S LSCP
Sbjct: 729 VEALIAAEELLIALGALQAPPKTERVKQLQRSRLSCP 765
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 350 (128.3 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 135/455 (29%), Positives = 206/455 (45%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKV 432
EG +L FL ++ + +F + + H LS +Q F PG RK+
Sbjct: 866 EGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKI 925
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 926 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 985
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+RLY++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 986 DGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVI 1045
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLG-REGLV-LA 608
A+ L ++GA + N +LT G+ L L + ++GK+++ F G E + LA
Sbjct: 1046 SNAMNLLRKIGACEPNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLEPVATLA 1101
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1102 AVMTEKSPFITPIGRKDE---ADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEIS 1158
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSY-WLWNPHKYTEYD-KWLKEIILS 722
+C N +N SL +D +EL ++ PS+ P + D LK ++ +
Sbjct: 1159 YCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSWEGRKGPQTLSFQDIALLKAVLAA 1218
Query: 723 ALAENVAMF---SGYD---QLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNN 776
L ++V D +L V Q+HPS S+ Q W+++ E +
Sbjct: 1219 GLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPS-SVNRDLQTYGWLLYQEKVRYTR 1277
Query: 777 QYLVCVTAFDFDSLSTLCPSPLF--DVSMMERKKL 809
YL T L T P LF D+ + R++L
Sbjct: 1278 VYLRETT------LITPFPVLLFGGDIEVQHRERL 1306
Score = 295 (108.9 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI-----AAEQSIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + A + +IVCTQPR
Sbjct: 571 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPR 630
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV EE GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 631 RISAVSLATRVCEEL-GCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 689
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 690 GLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCP 749
Query: 335 ISHVVGRNFPVDV 347
I + GR++PV+V
Sbjct: 750 ILRISGRSYPVEV 762
Score = 45 (20.9 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P V LFG E++H E R L+VD
Sbjct: 1286 ITPFPVLLFGGDIEVQHRE---RLLSVD 1310
Score = 41 (19.5 bits), Expect = 2.4e-51, Sum P(4) = 2.4e-51
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDKCDEIANVSNRLGSRN 78
SD ++ E L + + + L +L+NK LK + + + S + GS +
Sbjct: 468 SDEEKKREELNKMETNKPRDLFIAKLLNK-LKQQQQQQQQQRPESEKGGSED 518
Score = 40 (19.1 bits), Expect = 3.1e-51, Sum P(4) = 3.1e-51
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 60 KDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRVREFK 108
K D N++ RL A +L + K+G + +E I + RE +
Sbjct: 255 KFDPNQRYLNLAARLLDAKEQAAAFKLEKNKQGQKEAQEKIRKFQREME 303
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 351 (128.6 bits), Expect = 3.1e-51, Sum P(4) = 3.1e-51
Identities = 136/461 (29%), Positives = 215/461 (46%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKV 432
EG +L FL ++ + +F + + H LS +Q F P G RK+
Sbjct: 864 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKI 923
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 924 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 983
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 984 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1043
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN +LT G+ L L + ++GK+++ F G V LA
Sbjct: 1044 SNAMNLLRKIGACELNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1099
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1100 AVMTEKSPFITPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIA 1156
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKE--LAIIIPSYWLWNPHKYT-EYDK--WLKEI 719
+C +N +N SL +D +EL ++ L+ + + N T + + LK +
Sbjct: 1157 YCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSFEGNRATQTLSFQEIALLKAV 1216
Query: 720 ILSALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSC---SLLIFGQKPTWVVFGE 770
+ + L +NV +++ + ++A T Q Q+HPS L I+G W+++ E
Sbjct: 1217 LTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQVHPSSVNRDLQIYG----WLLYQE 1272
Query: 771 LLSVNNQYLVCVTAFDFDSLSTLCPSPLF--DVSMMERKKL 809
+ YL T L T P LF D+ + R++L
Sbjct: 1273 KIRYARVYLRETT------LITPFPVLLFGGDIEVQHRERL 1307
Score = 293 (108.2 bits), Expect = 3.1e-51, Sum P(4) = 3.1e-51
Identities = 79/241 (32%), Positives = 130/241 (53%)
Query: 122 QNVAKKESYDA-NVDVFRFEDCQ--RFDWSRIQAF--IVRECKRLEDGLPIYMYRQDILR 176
+N+ E + A +++ + ED + R + ++Q+ R K + LP++ +R ++
Sbjct: 522 ENLVSDEDFSALSLESEKVEDLEPVRNLFRKLQSTPKYQRLLKERQQ-LPVFKHRSSVVE 580
Query: 177 RIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIVCTQPRKIAAISLAQRVR 231
+ +++V+ GETG GKSTQ+ FL + + E +IVCTQPR+I+A+SLA RV
Sbjct: 581 TLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCNIVCTQPRRISAVSLATRVC 640
Query: 232 EESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMNDRDLSRISCIIVD 286
+E GC + +C Y ++ +S +++Y T LL+ D L+ +S +IVD
Sbjct: 641 DEL-GCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVD 699
Query: 287 EAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVD 346
E HERS +R DL L++MSAT D + S YF C I + GR++PV+
Sbjct: 700 EVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVE 759
Query: 347 V 347
V
Sbjct: 760 V 760
Score = 43 (20.2 bits), Expect = 3.1e-51, Sum P(4) = 3.1e-51
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P V LFG E++H E R ++VD
Sbjct: 1287 ITPFPVLLFGGDIEVQHRE---RLISVD 1311
Score = 43 (20.2 bits), Expect = 3.1e-51, Sum P(4) = 3.1e-51
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ +E L + + + L +L+NK LK + +
Sbjct: 467 SDAEKKKEELNKMETNKPRDLFIAKLLNK-LKQQQQQ 502
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 341 (125.1 bits), Expect = 3.4e-51, Sum P(3) = 3.4e-51
Identities = 134/456 (29%), Positives = 205/456 (44%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKV 432
EG +L FL ++ + +F + + H LS +Q F PG RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQDQAAAFMLPPPGVRKI 926
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+RLY++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 987 DGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQPQVI 1046
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLG-REGLV-LA 608
A+ L ++GA + + +LT G+ L L + ++GK+++ F G E + LA
Sbjct: 1047 SNAMNLLRKIGACEPSEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLEPVATLA 1102
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1103 AVMTEKSPFITPIGRKDE---ADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEIS 1159
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWN--PHKYTEYD-KWLKEIIL 721
+C N +N SL +D +EL L + + W P + D LK ++
Sbjct: 1160 YCQRNFLNRTSLLTLEDVKQELMK-LVRAAGFSSSTSWEGKKGPQALSFQDIALLKAVLA 1218
Query: 722 SALAENVAMF---SGYD---QLGYEVAMTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVN 775
+ L ++V D +L V Q+HPS S+ Q W+++ E +
Sbjct: 1219 AGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPS-SVNRDLQTYGWLLYQEKVRYA 1277
Query: 776 NQYLVCVTAFDFDSLSTLCPSPLF--DVSMMERKKL 809
YL T L T P LF D+ + R++L
Sbjct: 1278 RVYLRETT------LITPFPVLLFGGDIEVQHRERL 1307
Score = 296 (109.3 bits), Expect = 3.4e-51, Sum P(3) = 3.4e-51
Identities = 90/277 (32%), Positives = 143/277 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI-----AAEQSIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + A + +IVCTQPR
Sbjct: 572 LPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPR 631
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV EE GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 632 RISAVSLATRVCEEL-GCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 690
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 691 GLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCP 750
Query: 335 ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSK---M 391
I + GR++PV+V ++ T + S+ + E E+E TI +TSK +
Sbjct: 751 ILRISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLE---EEEEITIN--VTSKAGGI 805
Query: 392 EVEWACEKFDAPSAVAL-PFHGQLSFDEQFCVFKSYP 427
+ C + ++ L PF+ + S Q+ V P
Sbjct: 806 KKYQECIPVQSGASPELSPFYQKYSSRTQYAVLYMNP 842
Score = 45 (20.9 bits), Expect = 3.4e-51, Sum P(3) = 3.4e-51
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P V LFG E++H E R L+VD
Sbjct: 1287 ITPFPVLLFGGDIEVQHRE---RLLSVD 1311
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 343 (125.8 bits), Expect = 3.5e-51, Sum P(4) = 3.5e-51
Identities = 126/430 (29%), Positives = 203/430 (47%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKV 432
EG +L FL ++ + +F + + H LS +Q F P G RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKI 926
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 987 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1046
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN +LT G+ L L + ++GK+++ F G V LA
Sbjct: 1047 SNAMHLLRKIGACELNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1102
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1103 AVMTEKSPFTTPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIA 1159
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKELAI-------IIPSYWLWNPHKYTEYDK--W 715
+C N +N SL T++E++ + +AI I +Y+ + + + +
Sbjct: 1160 YCRRNFLNRTSLL----TLEEIKVSFPETIAIQYFYRFYSIKTYYSSSASQTLSFQEIAL 1215
Query: 716 LKEIILSALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSCSLLIFGQKPTWVVFG 769
LK ++ + L +NV +++ + ++A T Q Q+HPS S+ Q W+++
Sbjct: 1216 LKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPS-SVNRDLQTYGWLLYQ 1274
Query: 770 ELLSVNNQYL 779
E + YL
Sbjct: 1275 EKIRYARVYL 1284
Score = 294 (108.6 bits), Expect = 3.5e-51, Sum P(4) = 3.5e-51
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + E +IVCTQPR
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPR 628
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV +E GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 629 RISAVSLATRVCDEL-GCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 747
Query: 335 ISHVVGRNFPVDV 347
I + GR++PV+V
Sbjct: 748 ILRISGRSYPVEV 760
Score = 50 (22.7 bits), Expect = 3.5e-51, Sum P(4) = 3.5e-51
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P SV LFG E++H E R L+VD
Sbjct: 1290 ITPFSVLLFGGDIEVQHRE---RLLSVD 1314
Score = 43 (20.2 bits), Expect = 3.5e-51, Sum P(4) = 3.5e-51
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ +E L + + + L +L+NK LK + +
Sbjct: 467 SDAEKKKEELNKMETNKPRDLFIAKLLNK-LKQQQQQ 502
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 347 (127.2 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 135/458 (29%), Positives = 210/458 (45%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKV 432
EG +L FL ++ + +F + + H LS +Q F PG RK+
Sbjct: 864 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKI 923
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 924 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 983
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 984 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1043
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN LT G+ L L + ++GK+++ F G V LA
Sbjct: 1044 SNAMNLLRKIGACELNEPT--LTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1099
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1100 AVMTEKSPFTTPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIA 1156
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKE--LAIIIPSYWLWNPHKYT---EYDKWLKEI 719
+C N +N SL +D +EL ++ + + W N T + LK +
Sbjct: 1157 YCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQEIALLKAV 1216
Query: 720 ILSALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSCSLLIFGQKPTWVVFGELLS 773
+ + L +NV +++ + ++A T Q Q+HPS S+ Q W+++ E +
Sbjct: 1217 LAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPS-SVNRDLQTYGWLLYQEKVR 1275
Query: 774 VNNQYLVCVTAFDFDSLSTLCPSPLF--DVSMMERKKL 809
YL T L T P LF D+ + R++L
Sbjct: 1276 YTRVYLRETT------LITPFPVLLFGGDIEVQHRERL 1307
Score = 294 (108.6 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + E +IVCTQPR
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPR 628
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV +E GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 629 RISAVSLATRVCDEL-GCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 747
Query: 335 ISHVVGRNFPVDV 347
I + GR++PV+V
Sbjct: 748 ILRISGRSYPVEV 760
Score = 45 (20.9 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P V LFG E++H E R L+VD
Sbjct: 1287 ITPFPVLLFGGDIEVQHRE---RLLSVD 1311
Score = 43 (20.2 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ +E L + + + L +L+NK LK + +
Sbjct: 467 SDAEKKKEELNKMETNKPRDLFIAKLLNK-LKQQQQQ 502
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 347 (127.2 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 135/458 (29%), Positives = 210/458 (45%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFK-SYPGRRKV 432
EG +L FL ++ + +F + + H LS +Q F PG RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKI 926
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 987 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1046
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN LT G+ L L + ++GK+++ F G V LA
Sbjct: 1047 SNAMNLLRKIGACELNEPT--LTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1102
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1103 AVMTEKSPFTTPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIA 1159
Query: 665 WCWENSVNAKSLRRCQDTIKELETCLEKE--LAIIIPSYWLWNPHKYT---EYDKWLKEI 719
+C N +N SL +D +EL ++ + + W N T + LK +
Sbjct: 1160 YCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQEIALLKAV 1219
Query: 720 ILSALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSCSLLIFGQKPTWVVFGELLS 773
+ + L +NV +++ + ++A T Q Q+HPS S+ Q W+++ E +
Sbjct: 1220 LAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPS-SVNRDLQTYGWLLYQEKVR 1278
Query: 774 VNNQYLVCVTAFDFDSLSTLCPSPLF--DVSMMERKKL 809
YL T L T P LF D+ + R++L
Sbjct: 1279 YTRVYLRETT------LITPFPVLLFGGDIEVQHRERL 1310
Score = 294 (108.6 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + E +IVCTQPR
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPR 628
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV +E GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 629 RISAVSLATRVCDEL-GCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 747
Query: 335 ISHVVGRNFPVDV 347
I + GR++PV+V
Sbjct: 748 ILRISGRSYPVEV 760
Score = 45 (20.9 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P V LFG E++H E R L+VD
Sbjct: 1290 ITPFPVLLFGGDIEVQHRE---RLLSVD 1314
Score = 43 (20.2 bits), Expect = 4.1e-51, Sum P(4) = 4.1e-51
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ +E L + + + L +L+NK LK + +
Sbjct: 467 SDAEKKKEELNKMETNKPRDLFIAKLLNK-LKQQQQQ 502
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 343 (125.8 bits), Expect = 5.0e-51, Sum P(3) = 5.0e-51
Identities = 87/196 (44%), Positives = 118/196 (60%)
Query: 398 EKFDAPSA--VALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDS 454
EK D PS LP + L+ ++Q VF+ P G R + ATNVAETSLTIPG+K+V+D
Sbjct: 572 EKAD-PSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDC 630
Query: 455 GMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEP 514
G VK+ +++ TG++ +V +SQ+SANQRAGRAGRTEPG CYRLYS + F L E
Sbjct: 631 GRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEA 690
Query: 515 EIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTE 574
EI R + VL++ L I V F F PS++A+ A L+ LGA++ L+E
Sbjct: 691 EITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSE 750
Query: 575 EGKFLVKLGIEPRLGK 590
K + I P LG+
Sbjct: 751 MEKARLSCPISP-LGR 765
Score = 265 (98.3 bits), Expect = 5.0e-51, Sum P(3) = 5.0e-51
Identities = 90/315 (28%), Positives = 141/315 (44%)
Query: 95 KEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFI 154
+E+E I + + VLK P+ KE A + + EDC+ + ++
Sbjct: 187 EEKEKISEE-KHTEEQQQQVLKEETKPKEADMKEEKKA--ETWTKEDCKPAVFIPVERLP 243
Query: 155 VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV 214
+ RL LP+ Q I+ + + +VL GETG GK+TQ+ QFL ++G A+ I+
Sbjct: 244 EIQEARLR--LPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGII 301
Query: 215 -CTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFM 272
T+PR++AAIS++ RV E V+ Y + ++K+ MTD LL+
Sbjct: 302 GVTEPRRVAAISMSHRVATEMN---LSSGVVSYQIRYEGNVTENTKIKVMTDGVLLKEIQ 358
Query: 273 NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRR----FDLRLVIMSATADAHQLS- 327
D L + S II+DEAHERS R ++L+IMSAT +
Sbjct: 359 RDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTE 418
Query: 328 -KYFYDCG--ISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTIL 384
K + + V R F V V + + + Y + R + ++H G IL
Sbjct: 419 NKRLFSSPPPVIKVEARQFAVTVHFNK-----RTPMDDYTGETFRKICKIHRMLPPGGIL 473
Query: 385 AFLTSKMEVEWACEK 399
FLT + EV C +
Sbjct: 474 VFLTGQAEVHSVCRR 488
Score = 69 (29.3 bits), Expect = 5.0e-51, Sum P(3) = 5.0e-51
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 716 LKEIILSALAENVAMFSGYDQL-------GYEVAMTGQHVQLHPSCSLLIFGQKPTWVVF 768
L++I+L+ L +++A ++L Y+ + V +HPS +L P +VV+
Sbjct: 917 LRQIVLAGLGDHIARRVQAEELLDPKWRNAYKTPLLDDPVFIHPSSAL--HKTLPEFVVY 974
Query: 769 GELLSVNNQYLVCVTAFDFDSLSTLCP 795
E++ Y+ V A D + L P
Sbjct: 975 QEIMETTKMYMRGVCAVQDDWIPKLLP 1001
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 338 (124.0 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 109/336 (32%), Positives = 160/336 (47%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G IL FL E++ E+ + S V P H LS +EQ VF P G
Sbjct: 843 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVT 902
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ GM L VSQ++A QR GRAGR
Sbjct: 903 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 962
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFD-----FIDA 544
G C+ L++ F + L Q+ PEI RV L LRI L + I+
Sbjct: 963 VASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEP 1022
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P A ++ + L LGA+ + LT G L L ++ R+GKL+L R
Sbjct: 1023 PHADSLRASKIRLRDLGALTPDE---TLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPA 1079
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN- 663
L +AA +A S V D+K +A+ K++F N D LL Y+ W +E
Sbjct: 1080 LTIAASLAFKSPF---VSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRA 1136
Query: 664 --KWCWENSVNAKSLRRCQDTIKELETCLEKELAII 697
+C +N ++ + L+ ++K T L ++ +
Sbjct: 1137 SYNYCRQNFLSGRVLQEMA-SLKRQFTELLSDIGFV 1171
Score = 296 (109.3 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 85/271 (31%), Positives = 143/271 (52%)
Query: 117 YLDDPQNVAKKESYDA-NVDVFRFEDCQRF---DWSRIQAFIVRECKRLEDGLPIYMYRQ 172
Y++ + ++K+ + A +V + C++F SR +++E LP + R+
Sbjct: 489 YVNLKKKISKRYDWQAKSVHAENVKICKQFRIKQASRQFQSVLQE----RQSLPAWEERE 544
Query: 173 DILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA--EQ--SIVCTQPRKIAAISLAQ 228
+IL+ + Q+LV+ G TGCGK+TQ+ QF+ D + E+ +I+CTQPR+I+AIS+A+
Sbjct: 545 NILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAE 604
Query: 229 RVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEA 288
RV +E R +V S + ++++Y T LL+ D L ++ IIVDE
Sbjct: 605 RVAKE-RAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEV 663
Query: 289 HERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVR 348
HER+ +R L++++MSAT +A S+YF C + + GR FPVD
Sbjct: 664 HERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQF 723
Query: 349 YVPCATAGTSAVASYVSDVVRMVGEVHTTEK 379
++ A A T V S R + ++ + EK
Sbjct: 724 FLEDAIAVTRYVLQDGSPYARSMKQM-SKEK 753
Score = 43 (20.2 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK +K F+T DG +H+ + Q+ P +K+K ++F S SVY
Sbjct: 1242 QPKSDELK-FVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSM-VSVY 1299
Query: 1207 SVI 1209
++
Sbjct: 1300 PLV 1302
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 335 (123.0 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 119/379 (31%), Positives = 184/379 (48%)
Query: 370 MVGEVHTTEKEGTILAFLTSKMEVEW------ACEKFDAPSAV-ALPFHGQLSFDEQFCV 422
++ + T +EG IL FL E+ A +F P+A LP H ++ EQ V
Sbjct: 905 LICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKV 964
Query: 423 FKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSA 481
F P G RKVI ATN+AETS+TI V +VIDSG KE+ + P ++ + +SQ++A
Sbjct: 965 FLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANA 1024
Query: 482 NQRAGRAGRTEPGRCYRLYSKSDFET--RPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
QR GRAGR +PG C+ LY++ FE RP Q PE+ R+ L L+I LG+ ++ F
Sbjct: 1025 RQRTGRAGRVKPGICFSLYTRYRFEKLMRPY-QVPEMLRMPLVELCLQIKLLGLGHIKPF 1083
Query: 540 --DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR 597
++ PS A+ AI L ++GA++ G ELT G L KL ++ +GK++L +
Sbjct: 1084 LSRALEPPSEGAMTSAISLLHEVGAVE---GDEELTPLGHHLAKLPVDVLIGKMLL--YG 1138
Query: 598 RRLGREGLVLA-AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG----DL-------- 644
G +L+ A + S F + DEK D +K+ NG DL
Sbjct: 1139 GIFGCLSPILSIAAFLSYKSPF--IYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSD 1196
Query: 645 -FTLLSVYREWDSLPREERNK----WCWENSVNAKSLRRCQDTIKELETCLEKELAIIIP 699
++ Y +W + +E K +C +++ +R +D + T L I +P
Sbjct: 1197 HLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLP 1256
Query: 700 SYWLWNPHKYTEYDKWLKE 718
++ K D W +
Sbjct: 1257 KTGEFSGRKKENLDVWFSD 1275
Score = 298 (110.0 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 86/263 (32%), Positives = 135/263 (51%)
Query: 107 FKNGMHCVLKYLDDPQNVAKKESYD-ANVDVFRFEDC---QRFDWSRIQAFIVRECKRLE 162
F+N + V Y+ D ++ +S + A D + +C QR ++ + ++ +
Sbjct: 552 FENSLPLVDSYVKDKDDLGVVKSNNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKTR 611
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQP 218
LPI + IL+ + + +LV+ GETG GK+TQ+ QF+ D SG +I+CTQP
Sbjct: 612 TALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQP 671
Query: 219 RKIAAISLAQRVREE----SRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMN 273
R+IAAIS+AQRV +E S G DDS++ Y SA+ +++++ T LL+
Sbjct: 672 RRIAAISVAQRVADERCESSPGL--DDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAG 729
Query: 274 DRDLSRISCIIVDEAHERSXXXXXXXXXXXXX----XCRRFD--LRLVIMSATADAHQLS 327
DR L+ ++ IIVDE HERS C L++++MSAT DA S
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFS 789
Query: 328 KYFYDCGISHVVGRNFPVDVRYV 350
+YF C + GR PV ++
Sbjct: 790 RYFGHCPVITAQGRTHPVTTHFL 812
Score = 44 (20.5 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 45 KGLMEGELVNKWLKMKDDKCDEIANVSNRLGSRNSYAVFCEL 86
K G LV L KD+ + I + N++ + + +F +L
Sbjct: 454 KNRQAGGLVTLQLPPKDENFESIEDAQNKVAAFALHKLFSDL 495
Score = 37 (18.1 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 121 PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFI-VRECKR-LED-GLPIYMYRQDILR 176
P +V KE Y A D + ++ +R + QA + +R+ K+ + D GL M + R
Sbjct: 224 PFDVIAKEYYSARSDAIKAKE-KRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQR 281
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 334 (122.6 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 106/316 (33%), Positives = 155/316 (49%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVFKSYP-GRR 430
G IL FL E++ E+ + S V P H LS +EQ VF P G
Sbjct: 848 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVT 907
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ GM L VSQ++A QR GRAGR
Sbjct: 908 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 967
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGI---RDVQG-FD-FIDA 544
G C+ L++ + + L Q+ PEI RV L LRI L + ++Q F I+
Sbjct: 968 VASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEP 1027
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P ++ + L LGA+ + LT G L L ++ R+GKL+L R
Sbjct: 1028 PHTDSLRASKIRLRDLGALTPDE---RLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPA 1084
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE---E 661
L +AA +A S V D+K +A+ K++F N D LL Y+ W +E
Sbjct: 1085 LTIAASLAFKSPF---VSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRA 1141
Query: 662 RNKWCWENSVNAKSLR 677
+C +N ++ + L+
Sbjct: 1142 SYNYCRQNFLSGRVLQ 1157
Score = 293 (108.2 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 82/268 (30%), Positives = 138/268 (51%)
Query: 117 YLDDPQNVAKKESYDA-NVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDIL 175
Y++ + ++K+ + A +V + C++F + + + LP + R+ IL
Sbjct: 496 YVNLKKKISKRYDWQAKSVHAENGKICKQFRMKQASRQF-QSILQERQSLPAWEERETIL 554
Query: 176 RRIYGEQILVLIGETGCGKSTQLVQFLADSGIAA--EQ--SIVCTQPRKIAAISLAQRVR 231
+ Q++V+ G TGCGK+TQ+ QF+ D + E+ +I+CTQPR+I+AIS+A+RV
Sbjct: 555 NLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVA 614
Query: 232 EESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHER 291
+E R +V S + ++++Y T LL+ D L +S IIVDE HER
Sbjct: 615 KE-RAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHER 673
Query: 292 SXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVP 351
+ +R L++++MSAT +A S YF C + + GR FPVD ++
Sbjct: 674 TEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLE 733
Query: 352 CATAGTSAVASYVSDVVRMVGEVHTTEK 379
A A T V S +R + ++ + EK
Sbjct: 734 DAIAVTRYVLQDGSPYMRSMKQI-SKEK 760
Score = 48 (22.0 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1148 EPKDAFMKAFITF-DGRLHLEAAKALEQLEGKVLPGCGPWQKMKCQQLFHSSLSCPASVY 1206
+PK A +K F+T DG +H+ + Q+ P +K+K ++F S SVY
Sbjct: 1246 QPKSAELK-FVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM-VSVY 1303
Query: 1207 SVI 1209
++
Sbjct: 1304 PLV 1306
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 332 (121.9 bits), Expect = 3.4e-50, Sum P(3) = 3.4e-50
Identities = 75/188 (39%), Positives = 114/188 (60%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP + L+ ++Q VF S P G R I ATNVAETS+TIP +++V+D G KE + T
Sbjct: 705 LPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKT 764
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR-PLNQEPEIHRVHLGIAV 525
+ V +S+++A+QRAGRAGRT PG CYRLYS + F++ PL+ PEI R + V
Sbjct: 765 SVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIV 824
Query: 526 LRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIE 585
L++ + I ++ F F +P +E +++ L LGAI + GV LT+ G+ + +
Sbjct: 825 LQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAID-SEGV--LTKLGEQMSLFPLS 881
Query: 586 PRLGKLIL 593
PR K+++
Sbjct: 882 PRFSKMLI 889
Score = 273 (101.2 bits), Expect = 3.4e-50, Sum P(3) = 3.4e-50
Identities = 81/251 (32%), Positives = 122/251 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS-----IVCTQPR 219
LPI Q I+ +I+ ++++ G TG GK+TQL QFL ++G ++ +S I TQPR
Sbjct: 398 LPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPR 457
Query: 220 KIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLS 278
++AA+S+A+RV EE G S + Y F S + D+ + +MTD LL+ +D L+
Sbjct: 458 RVAAVSIAKRVSEELTGF---SSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLT 514
Query: 279 RISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD----------LRLVIMSATADAHQLSK 328
S +IVDEAHERS R + L+L+IMSAT S+
Sbjct: 515 AYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFSE 574
Query: 329 YFYDCGISHVVGRNFPVDVRYVPCATA-GTSAVASYVSDVVRMVGEVHTTEKEGTILAFL 387
+ + +D R P + + Y+ D V +H G+IL FL
Sbjct: 575 NKLLFSVPPPI---IKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFL 631
Query: 388 TSKMEVEWACE 398
T + EVE C+
Sbjct: 632 TGQQEVEQLCQ 642
Score = 65 (27.9 bits), Expect = 3.4e-50, Sum P(3) = 3.4e-50
Identities = 35/158 (22%), Positives = 71/158 (44%)
Query: 646 TLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWN 705
+LLS +D ++ K+C EN + K+L + K++ L++ + + ++
Sbjct: 972 SLLSAVCAYDYA--SDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQ 1029
Query: 706 PHKYTEYD-KWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIFGQKPT 764
T K L++ I SA + VA++ ++ GY V L PS G +
Sbjct: 1030 LKPPTSVQIKALRQFIASAYIDQVALYDK-EKRGY--------VTLFPS------GSEVV 1074
Query: 765 WVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVS 802
V +++++Y+V ++ + S + SPL ++S
Sbjct: 1075 QFVPDRTYNIDSEYVVYLSLHESRS-GRVYMSPLTEIS 1111
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 361 (132.1 bits), Expect = 3.9e-50, Sum P(5) = 3.9e-50
Identities = 84/220 (38%), Positives = 131/220 (59%)
Query: 398 EKFDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGM 456
EK P V LP + L +Q VF++ P G R V+ ATN+AETSLTIP +K+V+D+G
Sbjct: 840 EKPAGPLFV-LPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGR 898
Query: 457 VKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLN-QEPE 515
VK+ Y+ G++ V S++SA+QRAGRAGRT PG CYR+YS + F +PE
Sbjct: 899 VKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPE 958
Query: 516 IHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEE 575
I + + +L++ ++GI+ + GF F P ++++A+R L+ LGA+++ F +TE
Sbjct: 959 ILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKT--FSITEL 1016
Query: 576 GKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANAS 615
G + + + PR K++L LG+E L ++A S
Sbjct: 1017 GMKMSQFPVSPRHSKMLL------LGQEHNCLPYIIAIVS 1050
Score = 210 (79.0 bits), Expect = 3.9e-50, Sum P(5) = 3.9e-50
Identities = 54/145 (37%), Positives = 80/145 (55%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS---- 212
E + D LPI + I+ +I ++++ GETG GK+TQ+ QFL +SG +S
Sbjct: 397 EIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFP 456
Query: 213 --IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDS---KVIYMTDHCL 267
I TQPR++AA+S A+RV EE E + Y + DS K+ +MTD L
Sbjct: 457 GIIGVTQPRRVAAVSTAKRVAEELN--VEFGKEVGY-QIRYDKKLDSSVNKIKFMTDGIL 513
Query: 268 LQHFMNDRDLSRISCIIVDEAHERS 292
++ D LS+ S I++DEAHER+
Sbjct: 514 MREVQTDFLLSQYSSILIDEAHERN 538
Score = 104 (41.7 bits), Expect = 3.9e-50, Sum P(5) = 3.9e-50
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 310 FDLRLVIMSATADAHQLSK----YFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVS 365
+ L+LV+MSAT +K + + ++ R FPV + + T V +Y+
Sbjct: 578 YPLKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHF----NKKTELV-NYID 632
Query: 366 DVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 399
+ + V ++H G IL F+T K E+E+ C K
Sbjct: 633 ECYKKVVKIHKNLPSGGILVFVTGKQEIEYLCSK 666
Score = 49 (22.3 bits), Expect = 3.9e-50, Sum P(5) = 3.9e-50
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 78 NSYAVFCELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKE--SYDANVD 135
N + + NE KK K++ + +V+E + + L++ N E Y+ +++
Sbjct: 288 NINTIKTKTNENKKQNKKQKNKVEEKVKEEEEEEEIKKEELEEIANQVNSEIDRYNYSIE 347
Query: 136 VFRFED 141
VF E+
Sbjct: 348 VFGKEE 353
Score = 42 (19.8 bits), Expect = 3.9e-50, Sum P(5) = 3.9e-50
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 750 LHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPL 798
+HP+ +L + +V++ +++ + Y+ VT + S L PL
Sbjct: 1260 IHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEIN-PSWLPLLGKPL 1307
Score = 41 (19.5 bits), Expect = 2.6e-49, Sum P(5) = 2.6e-49
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 58 KMKDDKCDEIANVSNRLGSRNSYA--VFCELNERKKGLF 94
++K ++ +EIAN N R +Y+ VF + E + +F
Sbjct: 322 EIKKEELEEIANQVNSEIDRYNYSIEVFGKEEEENREVF 360
Score = 39 (18.8 bits), Expect = 4.1e-49, Sum P(5) = 4.1e-49
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 85 ELNERKKGLFKEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDAN 133
E +KK F + + + R +E+ + YL D Q + +S D N
Sbjct: 154 EEKSKKKFFFWKDQDVERDYQEYNDSHQDKGSYLKDQQK-EQDDSEDEN 201
Score = 38 (18.4 bits), Expect = 2.2e-26, Sum P(4) = 2.2e-26
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 325 QLSKYFYDCGISHVVGRNFP 344
Q+ ++ Y+ G H +FP
Sbjct: 437 QVPQFLYESGFGHRESGDFP 456
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 118 LDDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLED 163
+DD N+ + D N + +D + D FIV + + +E+
Sbjct: 721 VDDTFNIDNHDDDDDNDNDDDNDDIENLDVLNDDQFIVNDEEEVEE 766
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 333 (122.3 bits), Expect = 4.3e-50, Sum P(4) = 4.3e-50
Identities = 125/428 (29%), Positives = 200/428 (46%)
Query: 380 EGTILAFLTSKMEVEWACE------KFDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKV 432
EG +L FL ++ + +F + + H LS +Q F P G RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKI 926
Query: 433 IFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTE 492
+ ATN+AET +TIP V FVID+G KE+ + + M+ L VS++SA QR GRAGR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 493 PGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSAKAI 550
G C+R+Y++ FE PEI RV L L I+ + + F +D P + I
Sbjct: 987 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVI 1046
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLV--LA 608
A+ L ++GA +LN +LT G+ L L + ++GK+++ F G V LA
Sbjct: 1047 SNAMHLLRKIGACELNEP--KLTPLGQHLAALPVNVKIGKMLI--FGAIFGCLDPVATLA 1102
Query: 609 AVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREE--RNK-- 664
AVM S +G DE AD K + D T+ + Y W +E R++
Sbjct: 1103 AVMTEKSPFTTPIGRKDE---ADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIA 1159
Query: 665 WCWENSVNAKSL---RRCQDTIKELETCLEKELAIIIPSYWLWNPH--KYTEYDK--WLK 717
+C N +N SL R + T+ +L E I ++ ++ + + + LK
Sbjct: 1160 YCRRNFLNRTSLLTLERRRTTLLKLMN--ENAFTHIFIAFTFYSSRASQTLSFQEIALLK 1217
Query: 718 EIILSALAENVA--MFSGYDQLGYEVAM---TGQ-HVQLHPSCSLLIFGQKPTWVVFGEL 771
++ + L +NV +++ + ++A T Q Q+HPS S+ Q W+++ E
Sbjct: 1218 AVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPS-SVNRDLQTYGWLLYQEK 1276
Query: 772 LSVNNQYL 779
+ YL
Sbjct: 1277 IRYARVYL 1284
Score = 294 (108.6 bits), Expect = 4.3e-50, Sum P(4) = 4.3e-50
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIVCTQPR 219
LP++ +R I+ + +++V+ GETG GKSTQ+ FL + + E +IVCTQPR
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIVCTQPR 628
Query: 220 KIAAISLAQRVREESRGCYEDD---SVIC-YPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
+I+A+SLA RV +E GC + +C Y ++ +S +++Y T LL+ D
Sbjct: 629 RISAVSLATRVCDEL-GCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCG 334
L+ +S +IVDE HERS +R DL L++MSAT D+ + S YF C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 747
Query: 335 ISHVVGRNFPVDV 347
I + GR++PV+V
Sbjct: 748 ILRISGRSYPVEV 760
Score = 50 (22.7 bits), Expect = 4.3e-50, Sum P(4) = 4.3e-50
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 902 VSP-SVALFGAGAEIKHLELERRFLTVD 928
++P SV LFG E++H E R L+VD
Sbjct: 1290 ITPFSVLLFGGDIEVQHRE---RLLSVD 1314
Score = 43 (20.2 bits), Expect = 4.3e-50, Sum P(4) = 4.3e-50
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 SDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDK 63
SDA++ +E L + + + L +L+NK LK + +
Sbjct: 467 SDAEKKKEELNKMETNKPRDLFIAKLLNK-LKQQQQQ 502
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 342 (125.4 bits), Expect = 4.3e-50, Sum P(3) = 4.3e-50
Identities = 84/189 (44%), Positives = 113/189 (59%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP + L EQ VF+ P G R I ATNVAETSLTIPGV++V+DSG KE +
Sbjct: 732 LPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESN 791
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ--EPEIHRVHLGIA 524
G+ V VS++SANQR+GRAGRT PG CYRLYS + FE Q +PEI R+ +
Sbjct: 792 GVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFE-HDFEQFSKPEILRMPVESI 850
Query: 525 VLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
VL++ ++ I ++ F F P A+ AI+ L LGA L+N +TE+GK + +
Sbjct: 851 VLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGA--LDNKEM-ITEDGKKMSLFPL 907
Query: 585 EPRLGKLIL 593
PR K++L
Sbjct: 908 SPRFSKMLL 916
Score = 261 (96.9 bits), Expect = 4.3e-50, Sum P(3) = 4.3e-50
Identities = 80/258 (31%), Positives = 125/258 (48%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS---- 212
E ++ LP++ I+ I+ ++++ GETG GK+TQ+ QFL ++G AE S
Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442
Query: 213 --IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQ 269
+ TQPR++AA+S+A+RV E G + + Y F S D+KV +MTD LL+
Sbjct: 443 GMVGITQPRRVAAVSMAERVANEL-G--DHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLR 499
Query: 270 HFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRF-------------DLRLVI 316
M+D L++ S II+DEAHER+ C R L+L+I
Sbjct: 500 EMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSR--CVRLRAKLHKENPIEHKKLKLII 557
Query: 317 MSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVA-SYVSDVVRMVGEVH 375
MSAT ++S + + + + VD R P + A +Y + R ++H
Sbjct: 558 MSATL---RVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIH 614
Query: 376 TTEKEGTILAFLTSKMEV 393
G IL FLT + E+
Sbjct: 615 QKLPPGAILVFLTGQQEI 632
Score = 67 (28.6 bits), Expect = 4.3e-50, Sum P(3) = 4.3e-50
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 643 DLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLE----KE-LAII 697
D+F LLSV D +P+E++ + +N + K + K+L ++ KE +A++
Sbjct: 1002 DVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEEIVKLRKQLMYIIKSNTSKENIAVV 1061
Query: 698 IPSYWLWNPHKYTEYDKWLKEIILSALAENVAM 730
I + L + K LK++I + ++VA+
Sbjct: 1062 IRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAV 1094
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 336 (123.3 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 92/252 (36%), Positives = 129/252 (51%)
Query: 378 EKEGTILA-----FLTSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFKSYPGR-RK 431
+K G++ A E E KF LP + LS Q VF+ R
Sbjct: 615 DKNGSVSAEPAKSIAAENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERL 674
Query: 432 VIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRT 491
V+ ATNVAETSLTIPG+K+V+D+G VK ++ TGM V +SQ+SA+QRAGRAGRT
Sbjct: 675 VVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRT 734
Query: 492 EPGRCYRLYSKSDFETR-PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAI 550
PG CYRLYS + F + PEI +V + +L + ++ I V+ F F P AI
Sbjct: 735 GPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAI 794
Query: 551 EMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFR-----RRLGREGL 605
A R L L A+ N G LT GK + + PR +++L+ + R R L
Sbjct: 795 REAERCLKALEALDSNGG---LTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANL 851
Query: 606 VLAAVMANASSI 617
+L +A +++
Sbjct: 852 ILGYAVAAVAAL 863
Score = 214 (80.4 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 61/183 (33%), Positives = 92/183 (50%)
Query: 121 PQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVR-----ECKRLEDGLPIYMYRQDIL 175
P + + D+ + ED R+ AF+V E + LPI M Q+I+
Sbjct: 193 PLTTCRDDDEDSMDGLIENEDVT-VQGPRVPAFVVHVSRPAEVEETRKDLPIVMMEQEIM 251
Query: 176 RRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ-----SIV-CTQPRKIAAISLAQR 229
I +++ G+TGCGK+TQ+ QFL ++G ++Q I+ TQPR++A ++ A+R
Sbjct: 252 EAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKR 311
Query: 230 VREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAH 289
V E G V + +S + +MTD LL+ ND L R S II+DEAH
Sbjct: 312 VAFEL-GVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRRYSVIILDEAH 370
Query: 290 ERS 292
ERS
Sbjct: 371 ERS 373
Score = 97 (39.2 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 307 CRRFDLRLVIMSATADAHQL---SKYFYDCG-ISHVVGRNFPVDVRYVPCATAGTSAVAS 362
C+ L+L++MSAT + F + + V R +PV + + + + +
Sbjct: 411 CQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHF-----SKKTEIVD 465
Query: 363 YVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 399
Y+ + + V +H +G IL F+T + EV++ CEK
Sbjct: 466 YIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEK 502
Score = 62 (26.9 bits), Expect = 3.1e-49, Sum P(4) = 3.1e-49
Identities = 39/144 (27%), Positives = 58/144 (40%)
Query: 637 FCHRNG-DLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELA 695
FC NG L T+ + + D L R N C + S S TI+++E
Sbjct: 936 FCEANGLHLKTMDEMSKLKDQLLRLVFN--CCKPSETEDSFSWTHGTIQDVEKSWR---- 989
Query: 696 IIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCS 755
I S P E ++ L E I + A+ VA + + Y+ + V LH S
Sbjct: 990 -ITTSTSSKTPLLQNE-EELLGEAICAGWADRVARKTRATE--YQACAVQEPVFLHRWSS 1045
Query: 756 LLIFGQKPTWVVFGELLSVNNQYL 779
L+ P +V+ ELL N Y+
Sbjct: 1046 LI--NSAPELLVYSELLLTNRPYM 1067
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 329 (120.9 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 97/249 (38%), Positives = 137/249 (55%)
Query: 358 SAVASYVSDVVR-MVGEVHTTEKEGTILAFLTSKMEVEW------ACEKFDAPSAV-ALP 409
SAV Y D++ ++ + T +EG IL FL E+ A +F S LP
Sbjct: 861 SAVVDY--DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLP 918
Query: 410 FHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGM 468
H ++ EQ VF P G RKVI ATN+AETS+TI V +VIDSG KE+ + P +
Sbjct: 919 LHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKL 978
Query: 469 NVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFET--RPLNQEPEIHRVHLGIAVL 526
+ + VS+++A QR GRAGR +PG C+ LY++ FE RP Q PE+ RV L L
Sbjct: 979 SSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPY-QVPEMLRVPLVELCL 1037
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I LG+ ++ F ++ PS AI AI L ++GA++ G ELT G L KL +
Sbjct: 1038 HIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALE---GDEELTPLGHHLAKLPV 1094
Query: 585 EPRLGKLIL 593
+ +GK++L
Sbjct: 1095 DLLIGKMLL 1103
Score = 275 (101.9 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 78/234 (33%), Positives = 124/234 (52%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LPI ++DIL+++ + +LV+ GETG GK+TQ+ QF+ D SG +I+CTQPR
Sbjct: 597 LPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR- 655
Query: 221 IAAISLAQRVREESRGCYE----DDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
AI++AQRV +E C D+SV+ Y +A+ +++++ T LL+ + D
Sbjct: 656 --AITVAQRVADER--CEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDT 711
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRR-FD-----LRLVIMSATADAHQLSKY 329
L ++ IIVDE HERS ++ +D L++++MSAT DAHQ S+Y
Sbjct: 712 TLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRY 771
Query: 330 FYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTI 383
F C I GR PV ++ T + + S + + T+K G++
Sbjct: 772 FGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAA-LSSDTSITDKLGSV 824
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 327 (120.2 bits), Expect = 3.3e-48, Sum P(3) = 3.3e-48
Identities = 107/327 (32%), Positives = 170/327 (51%)
Query: 378 EKEGTILAFLTSKMEVEWACEKFDAP-----SAVA-----LPFHGQLSFDEQFCVFKSYP 427
+K+ +IL F+ ++ C + P A+ +P H LS +Q VF+ P
Sbjct: 895 KKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAP 954
Query: 428 -GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAG 486
GR KV+ ATN+AETS+TI V+ V+D G V + F TG +V+ S++S QRAG
Sbjct: 955 NGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAG 1014
Query: 487 RAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRD-----VQGF- 539
RAGRT G C+++++KS E++ +Q+ PEI R L L + L +++ +Q F
Sbjct: 1015 RAGRTSSGLCFKVFTKS-MESQLQDQDTPEILRTSLQQLCLHV-KLFLKNNKNTTIQDFL 1072
Query: 540 -DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVF-ELTEEGKFLVKLGIEPRLGKLIL-SCF 596
I+ PS++ I+ +I L+ + A+K+N ELT G L L ++ +GK++L C
Sbjct: 1073 NRAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCI 1132
Query: 597 RRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDLFTLLSVYREW- 654
R L L +AA + N S F + D+ I+ +F N D TL++ Y W
Sbjct: 1133 FRCLDPI-LTIAATL-NYKSPF--LNPPDKTIRP---MDKFSSPNQSDHQTLINAYNSWR 1185
Query: 655 DSLPREERNKWCWENSVNAKSLRRCQD 681
S+ ++C EN ++ +LR QD
Sbjct: 1186 KSIQDGNEYQFCRENYLSIPTLRTIQD 1212
Score = 287 (106.1 bits), Expect = 3.3e-48, Sum P(3) = 3.3e-48
Identities = 67/198 (33%), Positives = 117/198 (59%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ----SIVCTQP 218
+ LP++ +++ L+ + Q++V+ ETGCGKSTQ+ Q++ +S I+ E+ +IVCTQP
Sbjct: 623 ESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVCTQP 682
Query: 219 RKIAAISLAQRVREE-SRGCYEDD--SVICYPSFSSAQHFDS-KVIYMTDHCLLQHFMND 274
R+I+AI +A+RV E + G E+ ++ Y + ++ S ++++ T LL+ ++
Sbjct: 683 RRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRILDV 742
Query: 275 RDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFY--D 332
++S +S II+DE HERS +R DL++++MSAT +A Q++ YF D
Sbjct: 743 SNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFKCTD 802
Query: 333 CGISHVVGRNFPVDVRYV 350
I + G FPV Y+
Sbjct: 803 DSIFSIPGFTFPVKNIYI 820
Score = 41 (19.5 bits), Expect = 3.3e-48, Sum P(3) = 3.3e-48
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 54 NKWLKMKDDKCDEIANVSNRLGSRNSYAVFCELNERKK 91
NK K +++ + N +N + N+Y LNE++K
Sbjct: 560 NKVQKQQNNNNNNNNNNNNNNNNNNNYNYKKVLNEKEK 597
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 308 (113.5 bits), Expect = 5.5e-48, Sum P(2) = 5.5e-48
Identities = 100/316 (31%), Positives = 153/316 (48%)
Query: 381 GTILAFLTSKMEVEWACEKFDAPS---------AVALPFHGQLSFDEQFCVF-KSYPGRR 430
G +L FL E++ E+ + V P H LS +EQ VF + G
Sbjct: 891 GAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVT 950
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AETS+TI V +VIDSG +KE ++ M L VS+++A QR GRAGR
Sbjct: 951 KIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGR 1010
Query: 491 TEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILALGIRDVQGFD-----FIDA 544
G C+ L++ FE Q+ PEI RV L LR+ L + + D I+
Sbjct: 1011 VASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEP 1070
Query: 545 PSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREG 604
P+ ++E A + L LGA+ LT G L L ++ R+GKL+L R
Sbjct: 1071 PTEGSLEAAKQRLCALGALTDEES---LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPA 1127
Query: 605 LVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPR---EE 661
L +AA +A S V D++ +A+ K+ F N D L+ Y+ W + + +
Sbjct: 1128 LTIAASLAFKSPF---VSPWDKREEANEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKA 1184
Query: 662 RNKWCWENSVNAKSLR 677
++C EN ++ + L+
Sbjct: 1185 GYQYCRENFLSIRGLQ 1200
Score = 293 (108.2 bits), Expect = 5.5e-48, Sum P(2) = 5.5e-48
Identities = 74/225 (32%), Positives = 123/225 (54%)
Query: 142 CQRFDWSRI-QAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQ 200
C+ F R + +I + +R + LP + R+ IL + Q+LV+ G TGCGK+TQ+ Q
Sbjct: 560 CREFKRKRSSRRYISMQEQRQK--LPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQ 617
Query: 201 FLADSGIAAEQ-----SIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHF 255
F+ D+ + + +I+CTQPR+I+AI++A RV +E R S + +
Sbjct: 618 FILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQE-RAEALGHSTGYQIRLETVRSS 676
Query: 256 DSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLV 315
+++++ T LL+ D +LS ++ +IVDE HER+ +R DL+++
Sbjct: 677 ITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVI 736
Query: 316 IMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAV 360
+MSAT +A S+YF +C H+ GR FPV+ ++ A A T V
Sbjct: 737 MMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRYV 781
Score = 37 (18.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 1139 CCRV---QVFPPEPKDAFMKAFITFDGRLHLEAAK 1170
C RV +VF P D+ I LEAAK
Sbjct: 1046 CLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAK 1080
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 341 (125.1 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
Identities = 107/349 (30%), Positives = 178/349 (51%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK-----FDAPSA--VALPFHGQLSFDEQ 419
+V+++ ++ + K+G IL FL E+ EK F A SA + L H ++ +EQ
Sbjct: 562 IVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQ 621
Query: 420 FCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQ 478
VF P G RK++ ATN+AE+++TI V +VIDSG +KE ++P ++ L+ VS+
Sbjct: 622 KKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSK 681
Query: 479 SSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIR-DVQ 537
++A QRAGRAGR + G CY LYSK + P + PE+ R+ + L++ L +V
Sbjct: 682 ANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVN 741
Query: 538 GF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSC 595
F +D P A++IE A+ L +GA+ ELTE G+ +L + PR+ K+I
Sbjct: 742 DFLQKLMDPPVAQSIENALIILKDIGALTPEE---ELTELGQKFGQLPVHPRISKMIYFA 798
Query: 596 FRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDL---FTLLSVYR 652
L+LA A+ F S ++ KA K + GD ++ ++
Sbjct: 799 ILVNCLDPALILACA-ADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQ 857
Query: 653 EWDSLPREERNK-WCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS 700
W + + K +C + ++ ++R D ++L+ L + +IPS
Sbjct: 858 CWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHG--VIPS 904
Score = 253 (94.1 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
Identities = 67/196 (34%), Positives = 102/196 (52%)
Query: 156 RECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS--- 212
RE LPI +R I+ + Q++++ GETGCGK+TQ+ Q+L D +++
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACK 267
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFM 272
I+CTQPR+I+AIS++ R+ E RG +V S +S V++ T+ LL+ +
Sbjct: 268 IICTQPRRISAISVSDRISWE-RGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326
Query: 273 N---DRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKY 329
+ + I+ IIVDE HER LRL++MSAT DA + S+Y
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEY 386
Query: 330 FYDCGISHVVGRNFPV 345
F C + V G +PV
Sbjct: 387 FGGCPVVRVPGFTYPV 402
Score = 44 (20.5 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 844 FMDERIGIEVNVDQNQILLFASSQDIEE 871
F+D+ + + +N D+N LL A +D ++
Sbjct: 406 FLDDALSV-LNSDKNSHLLSAVKRDFKD 432
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 296 (109.3 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 87/285 (30%), Positives = 150/285 (52%)
Query: 409 PFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTG 467
P H ++ +EQ F P G RK++ ATN+AET +TIP V VID+G +E F+
Sbjct: 1001 PLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQ 1060
Query: 468 MNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVL 526
M+ L +S+++A QR GRAGR + G C+ +++K + +Q+ PE+ R+ L +
Sbjct: 1061 MSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAI 1120
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
R+ I ++ +D PSAK I AI L+ + A L G +LT G L +L +
Sbjct: 1121 RVKICKIGGIEETLSKALDPPSAKNIRRAIDALIDVRA--LTQGE-DLTPLGNQLARLPL 1177
Query: 585 EPRLGKLIL--SCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG 642
+ LGKLIL S F+ L + +AA++++ S G ++ +AD +++ F +
Sbjct: 1178 DVFLGKLILLGSIFKC-LDM-AITVAAILSSKSPFVAPFG---QRSQADTVRLGFRRGDS 1232
Query: 643 DLFTLLSVYREWDSL------PREERNKWCWENSVNAKSLRRCQD 681
D+ T+ + Y W + + ++C +N ++ ++L +D
Sbjct: 1233 DILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIED 1277
Score = 291 (107.5 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 67/193 (34%), Positives = 110/193 (56%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS--IVCTQPRKIA 222
LP++ +R+ +L + Q++++ GETGCGKSTQ+ FL + +A ++ I CT+PR+I+
Sbjct: 691 LPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIYCTEPRRIS 750
Query: 223 AISLAQRVREE-SRGCYE---DDSVICYPSFSSAQHF-DSKVIYMTDHCLLQHFMNDRDL 277
AISLA+RV EE G + S++ Y A ++++++ T +++ DL
Sbjct: 751 AISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLEGSNDL 810
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
I+ +++DE HERS RR DL++V+MSAT DA + S Y + +
Sbjct: 811 RDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGAPVLN 870
Query: 338 VVGRNFPVDVRYV 350
V GR FPV V ++
Sbjct: 871 VPGRTFPVQVNFL 883
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 363 (132.8 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 106/312 (33%), Positives = 164/312 (52%)
Query: 364 VSDVVRMVGE-VHTTEKEGTILAFLTSKMEVEWACEKF-D----APSA---VALPFHGQL 414
+ V++ + E H +EGTIL FL E++ + D +P A + +P H L
Sbjct: 735 IESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSAL 794
Query: 415 SFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRV 473
S ++Q VFK P G+RK++ +TN+AETS+TI FV+D G++KE F+ M L +
Sbjct: 795 SGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDL 854
Query: 474 CRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRILAL- 531
VS+++A QR GRAGR PG C LY+ ++ L Q PEI RV L VLRI L
Sbjct: 855 VWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQ 914
Query: 532 --GIRDVQG--FDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
R+ + ++AP+ ++ A+ L +GA+ + +LT G L L ++ R
Sbjct: 915 TFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAED---QLTPLGHHLAALPVDVR 971
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
+GKL+L + L +AA ++N S V +++ +AD K F N D T+
Sbjct: 972 IGKLMLYGAIFQCLDSVLTIAACLSNKSPF---VSPLNKRTEADKCKRMFALGNSDHLTV 1028
Query: 648 LSVYREWDSLPR 659
L+ YR+W + R
Sbjct: 1029 LNAYRKWLDVAR 1040
Score = 232 (86.7 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 64/202 (31%), Positives = 104/202 (51%)
Query: 159 KRLEDG---LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSG------IAA 209
+++ DG LP + + IL I ++V+ GETGCGKSTQ+ QF+ D+ + A
Sbjct: 444 QKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPA 503
Query: 210 EQS-----IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMT 263
+++ I+CTQPR+++AI +A+RV E ++ Y + +++ + T
Sbjct: 504 KENLPHVEIICTQPRRLSAIGVAERVAAERLD--RIGQLVGYQIRLENKVSQSTRLSFCT 561
Query: 264 DHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADA 323
LL+ +D L ++ +IVDE HERS R DL++++MSAT +A
Sbjct: 562 TGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNA 621
Query: 324 HQLSKYFYDCGISHVVGRNFPV 345
S YF + + GR FPV
Sbjct: 622 ALFSDYFGGAPVLDIPGRTFPV 643
Score = 44 (20.5 bits), Expect = 8.7e-13, Sum P(3) = 8.7e-13
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 678 RCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQL 737
+C D++ + CL + + P +K TE DK K + ++++ + + Y +
Sbjct: 983 QCLDSVLTIAACLSNKSPFVSPL------NKRTEADK-CKRMFALGNSDHLTVLNAYRKW 1035
Query: 738 GYEVAMTGQH 747
+VA G +
Sbjct: 1036 -LDVARRGNY 1044
Score = 38 (18.4 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 911 AGAEIKHLEL--ERRFLTVDVYHSNANILDDKELLMFLEKNASG 952
A + ++LEL F+ +DV N D+ L +E+N +G
Sbjct: 1065 ADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGVEQNHNG 1108
Score = 37 (18.1 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 869 IEEVLGLVSDVLEYEKKW 886
+E++L + V+EY+ K+
Sbjct: 648 LEDILEMSDFVMEYDTKY 665
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 335 (123.0 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 99/357 (27%), Positives = 174/357 (48%)
Query: 357 TSAVASY--VSDVVRMVGE-VHTTEKEGTILAFLTSKMEVEWACE----KFDAPSAVALP 409
TS +Y + VV V + + G+I+ FL E+ C K + + LP
Sbjct: 837 TSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLP 896
Query: 410 FHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H L+ ++Q VFK Y G+RKV+ +TN+AETS+TI ID+G K ++ P
Sbjct: 897 LHSALTPEDQKRVFKKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTT 956
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRI 528
L +S++ QR GRAGR G Y+L+SK+ +E ++ PEI R+ L L +
Sbjct: 957 KLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSV 1016
Query: 529 LALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI-E 585
A+GI+DV+ F +DAP A++ A R L +G + ++ LT+ G+F+ + + +
Sbjct: 1017 KAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDK--SLTQLGQFISLMPVMD 1074
Query: 586 PRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLF 645
+ GKL++ ++L +++ F + EKIK K + GDLF
Sbjct: 1075 SKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYE---SRGDLF 1131
Query: 646 TLLSVYREWDSLPREE-RNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSY 701
+L + R++ + + K+ +N ++ + + + + + L K++ + Y
Sbjct: 1132 AVLEIVRDYFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSIL-KDVGFLPMDY 1187
Score = 247 (92.0 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 64/204 (31%), Positives = 108/204 (52%)
Query: 149 RIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD---- 204
RI++ + + + + LP + ++ I+ I +++++ GETG GKSTQ+VQF+ D
Sbjct: 588 RIKSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQK 647
Query: 205 -SGIAAEQSIVCTQPRKIAAISLAQRVREESR-GCYEDDS-VICYPSFSSAQHFDSKVIY 261
G + IVCTQPR+I+AI LA+RV +E C E+ VI + + A +++ +
Sbjct: 648 EKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKAS---TRIKF 704
Query: 262 MTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATA 321
MT L++ N R + + +++DE HERS R +++V+MSAT
Sbjct: 705 MTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATV 764
Query: 322 DAHQLSKYFYDCGISHVVGRNFPV 345
+ K+F H+ GR FP+
Sbjct: 765 NVDLFKKFFPGLATCHIEGRTFPI 788
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 327 (120.2 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 80/212 (37%), Positives = 117/212 (55%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
L + L +Q +F+ P RKVI +TN+AETS+TIP +K+VIDSG VK YF+
Sbjct: 403 LQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNR 462
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
G NVLRV ++S+ SA QR+GRAGR PG+ YR+Y+K ++E PEI R L L
Sbjct: 463 GSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYL 522
Query: 527 RILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
+ A+ I + F+F + P + + + L ++ AI +NN LT+ GK L + P
Sbjct: 523 ELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNN---LTDLGKKLCLFPLNP 579
Query: 587 RLGKLILSCFRRRLGREGLVLAAVMANASSIF 618
++L E + A++ N SIF
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALL-NCDSIF 610
Score = 143 (55.4 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 40/168 (23%), Positives = 85/168 (50%)
Query: 210 EQSIVCTQPRKIAAISLAQRVREE-SRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCL 267
++ ++ + PR++A I++A+RV +E RG + + + Y F + +++ ++TD L
Sbjct: 69 KKKMLISLPRRVATITVAERVSKEMKRG--DIGNYVGYTIRFKNVCSDKTRIKFVTDGIL 126
Query: 268 LQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLS 327
++ MND L + +I+DE HERS +R +++++MSAT D + +
Sbjct: 127 IREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFN 186
Query: 328 KYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVH 375
++F + I + + + + Y P + Y+ VV + ++H
Sbjct: 187 QFFNNPPIITIPHKLHKITI-YYPRRN-----IEDYILSVVSTILQIH 228
Score = 105 (42.0 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 37/168 (22%), Positives = 79/168 (47%)
Query: 623 SDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDT 682
+D K+ + + + H +GD TLL ++ W +E+ +C ++N + L++ +
Sbjct: 695 NDKNKL-INVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKI 753
Query: 683 IKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVA 742
+L ++ ++ I IP + HK+ + L + +A++ + + Y L V
Sbjct: 754 KIQLLEIMKNKMKIEIPKKL--HMHKWDQILICLCKACFFNIAKSTSNTNVYINL---VN 808
Query: 743 MTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSL 790
T +++HPS +L KPT++ + +++ Y VT + D L
Sbjct: 809 KT--KIRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWL 854
Score = 91 (37.1 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFL 202
LPI Y+ +I + I ++++ GETGCGK+TQ+ Q +
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 42 (19.8 bits), Expect = 2.7e-39, Sum P(4) = 2.7e-39
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 791 STLCPSPLFDVSMMERKKLHVRVITGFGSILLKKF 825
S + P+ +F +++ K+L+ R++T + L K+
Sbjct: 823 SYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKY 857
Score = 38 (18.4 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 23 VVVPSDADELEERLRNLFV-DHVKGLMEGELVNKWLKMKDD 62
V +P +E+E + N+ + + +K + +G L+NK +K +++
Sbjct: 321 VFLPGQ-EEIE--MVNIMLKEKLKIIYKGNLLNKLMKERNN 358
Score = 37 (18.1 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 362 SYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVA 407
SY+ ++ T++ + A + +K+E +W + A VA
Sbjct: 823 SYIKPTFIFYSDIVQTKR---LYARIVTKIEADWLLKYVSAKFQVA 865
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 327 (120.2 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 80/212 (37%), Positives = 117/212 (55%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
L + L +Q +F+ P RKVI +TN+AETS+TIP +K+VIDSG VK YF+
Sbjct: 403 LQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNR 462
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
G NVLRV ++S+ SA QR+GRAGR PG+ YR+Y+K ++E PEI R L L
Sbjct: 463 GSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYL 522
Query: 527 RILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
+ A+ I + F+F + P + + + L ++ AI +NN LT+ GK L + P
Sbjct: 523 ELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNN---LTDLGKKLCLFPLNP 579
Query: 587 RLGKLILSCFRRRLGREGLVLAAVMANASSIF 618
++L E + A++ N SIF
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALL-NCDSIF 610
Score = 143 (55.4 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 40/168 (23%), Positives = 85/168 (50%)
Query: 210 EQSIVCTQPRKIAAISLAQRVREE-SRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCL 267
++ ++ + PR++A I++A+RV +E RG + + + Y F + +++ ++TD L
Sbjct: 69 KKKMLISLPRRVATITVAERVSKEMKRG--DIGNYVGYTIRFKNVCSDKTRIKFVTDGIL 126
Query: 268 LQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLS 327
++ MND L + +I+DE HERS +R +++++MSAT D + +
Sbjct: 127 IREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFN 186
Query: 328 KYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVH 375
++F + I + + + + Y P + Y+ VV + ++H
Sbjct: 187 QFFNNPPIITIPHKLHKITI-YYPRRN-----IEDYILSVVSTILQIH 228
Score = 105 (42.0 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 37/168 (22%), Positives = 79/168 (47%)
Query: 623 SDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDT 682
+D K+ + + + H +GD TLL ++ W +E+ +C ++N + L++ +
Sbjct: 695 NDKNKL-INVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKI 753
Query: 683 IKELETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVA 742
+L ++ ++ I IP + HK+ + L + +A++ + + Y L V
Sbjct: 754 KIQLLEIMKNKMKIEIPKKL--HMHKWDQILICLCKACFFNIAKSTSNTNVYINL---VN 808
Query: 743 MTGQHVQLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSL 790
T +++HPS +L KPT++ + +++ Y VT + D L
Sbjct: 809 KT--KIRIHPSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWL 854
Score = 91 (37.1 bits), Expect = 8.4e-46, Sum P(4) = 8.4e-46
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFL 202
LPI Y+ +I + I ++++ GETGCGK+TQ+ Q +
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 42 (19.8 bits), Expect = 2.7e-39, Sum P(4) = 2.7e-39
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 791 STLCPSPLFDVSMMERKKLHVRVITGFGSILLKKF 825
S + P+ +F +++ K+L+ R++T + L K+
Sbjct: 823 SYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKY 857
Score = 38 (18.4 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 23 VVVPSDADELEERLRNLFV-DHVKGLMEGELVNKWLKMKDD 62
V +P +E+E + N+ + + +K + +G L+NK +K +++
Sbjct: 321 VFLPGQ-EEIE--MVNIMLKEKLKIIYKGNLLNKLMKERNN 358
Score = 37 (18.1 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 362 SYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVA 407
SY+ ++ T++ + A + +K+E +W + A VA
Sbjct: 823 SYIKPTFIFYSDIVQTKR---LYARIVTKIEADWLLKYVSAKFQVA 865
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 326 (119.8 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 83/228 (36%), Positives = 118/228 (51%)
Query: 390 KMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGV 448
K+E D LP + LS +Q VF P G R + +TNVAETSLTIPGV
Sbjct: 560 KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGV 619
Query: 449 KFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETR 508
K+VID G K ++ TG++ VCR+SQ+S +QRAGRAGR G YRLYS + ++
Sbjct: 620 KYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDF 679
Query: 509 PLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK--LN 566
+PEI VL + ++ I V F F AP + +E A + L +LGA+
Sbjct: 680 VKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTK 739
Query: 567 NGVFE--LTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMA 612
NG E +T+ GK L + P K I + L ++L ++++
Sbjct: 740 NGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLS 787
Score = 263 (97.6 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 85/284 (29%), Positives = 130/284 (45%)
Query: 122 QNVAKKESYDA--NVDVFRFEDCQRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIY 179
Q V K+E + N D+ + ++ +E ++ LPI+ I+ I
Sbjct: 191 QIVVKREDDEESDNEDILALPTTTVINRKKVIVERSKEIQKSRAELPIFAEEMRIVEAIN 250
Query: 180 GEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIV-CTQPRKIAAISLAQRVREESRGCY 238
+ V+ GETG GK+TQ+ QFL ++G A+E ++ T+PR++AAI++AQRV E
Sbjct: 251 ENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMAQRVGVELA--- 307
Query: 239 EDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXX 298
+ D V + + + +++MTD L++ D L + S I++DEAHERS
Sbjct: 308 KPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVL 367
Query: 299 XXXXXXXXCRRFD----LRLVIMSATA--DAHQLSKYF--YDCGISHVVGRNFPVDVRYV 350
R LRLVIMSAT D K F + V R FPV V +
Sbjct: 368 IGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFE 427
Query: 351 PCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVE 394
Y++ R +H T G IL F+T + EV+
Sbjct: 428 K------RTPDDYIASAFRKTCRIHETLPPGAILVFVTGQHEVK 465
Score = 37 (18.1 bits), Expect = 1.3e-45, Sum P(3) = 1.3e-45
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 940 KELLMFLEKNASGSICSIHK 959
+EL+ EK S+C++ K
Sbjct: 961 QELVQVNEKKLMTSVCAVDK 980
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 319 (117.4 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 124/402 (30%), Positives = 185/402 (46%)
Query: 374 VHTTEKEGTILAFLTSKMEVEWACEK-------FDAPSAVALPFHGQLSFDEQFCVFKSY 426
+ T G +L FL + +A +K F + S LP H Q+ DEQ VF
Sbjct: 646 IETLNVPGAVLVFLPG-WNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPV 704
Query: 427 P-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
P G KVI +TN+AETS+TI V +VIDS K F M S+++ QR
Sbjct: 705 PDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRK 764
Query: 486 GRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFID 543
GRAGR PG C+ L SK+ F+ + PEI R L L I L + + F I+
Sbjct: 765 GRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIE 824
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL-ILSCFRRRLGR 602
P A+ A L +L A+ N+ ELT G+ L KL IEPRLGK+ I+ C +
Sbjct: 825 PPPLDAVIEAEHTLRELDALDSND---ELTPLGRILAKLPIEPRLGKMMIIGC----IFY 877
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN--GDLFT----LLSVYREWDS 656
G L + +A++ F E ++ ++ + HRN G+ F+ LLSV++ WD
Sbjct: 878 VGDALCTI--SAATCF------PEPFISEGRRLGYVHRNFAGNRFSDHVALLSVFQAWDD 929
Query: 657 LP---REERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNP-HKYTEY 712
+ ++C +N +LR + +L+ L + P L N T
Sbjct: 930 ARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDIL---VNAGFPEECLMNQVFNNTGP 986
Query: 713 DKWLKEIILSALAENVAMFSGYDQLGYEVAMT-GQHVQLHPS 753
D L ++++S LA V Y + ++ T G++ +H S
Sbjct: 987 DNNL-DVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKS 1027
Score = 255 (94.8 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 65/195 (33%), Positives = 106/195 (54%)
Query: 163 DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQP 218
+ LP+ + ++I+ ++ ++++ G TGCGK+TQ+ Q++ D I AA+ +IV TQP
Sbjct: 388 ESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQP 447
Query: 219 RKIAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDR 275
R+I+A+S+A+RV E RG E+ C S F S + +++ T LL+ +
Sbjct: 448 RRISAVSVAERVAFE-RG--EEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ES 502
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
+ IS +IVDE HER ++R+++MSAT D +YF++C I
Sbjct: 503 GIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPI 562
Query: 336 SHVVGRNFPVDVRYV 350
V GR FPV Y+
Sbjct: 563 IEVFGRTFPVQEYYL 577
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 298 (110.0 bits), Expect = 7.8e-45, Sum P(2) = 7.8e-45
Identities = 114/413 (27%), Positives = 186/413 (45%)
Query: 363 YVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA----------VALPFHG 412
+++D+V + E E EG IL FL ++ D P P H
Sbjct: 408 FIADLVYYICE---NEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHS 464
Query: 413 QLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVL 471
+ EQ VF+ P G+RKVI +T +AETS+TI V +VI+SG K + ++ T + L
Sbjct: 465 LMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSL 524
Query: 472 RVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILAL 531
V++++ QR GRAGR PG CY L+S++ + PEI R L +L + L
Sbjct: 525 DEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLL 584
Query: 532 GIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLG 589
I D F I+AP+ +AI+M + L ++ A+ G LT G L KL I+P++G
Sbjct: 585 HIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALD-QTGT--LTPLGMHLAKLPIDPQMG 641
Query: 590 KLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH--RNGDLFTL 647
K+IL AA ++ S + +G + + D +K + R+ L
Sbjct: 642 KMILMSALFCCLDPITSAAAALSFKSPFYSPLGKES---RVDEIKRRMARNMRSDHLMVH 698
Query: 648 LSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPH 707
++ DS +C++N +++ +L++ + + L + + +
Sbjct: 699 NTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASN 758
Query: 708 KYTEYDKWLKEIILSALAENVAMFSGYDQLGYEV----AMT---GQHVQLHPS 753
K +E L+ II + L N+A Q+ V M G+ V HPS
Sbjct: 759 KNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPS 811
Score = 268 (99.4 bits), Expect = 7.8e-45, Sum P(2) = 7.8e-45
Identities = 67/200 (33%), Positives = 104/200 (52%)
Query: 159 KRLE--DGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQS 212
KRLE LP Y DI++ + Q+++++G TGCGK+TQ+ Q L D G A+
Sbjct: 145 KRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCR 204
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFD-SKVIYMTDHCLLQH 270
I+CTQPR+I+AI++A+ V E C + + Y S + + + + Y T LLQ
Sbjct: 205 IICTQPRRISAIAIAEWVSYER--CESLGNSVGYQIRLESRKARERASITYCTTGVLLQQ 262
Query: 271 FMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
+D + +S +I+DE HERS R DL++++MSAT YF
Sbjct: 263 LQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYF 322
Query: 331 YDCGISHVVGRNFPVDVRYV 350
+C + + G FPV + Y+
Sbjct: 323 NNCPMFRIEGVMFPVKMLYL 342
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 313 (115.2 bits), Expect = 1.1e-44, Sum P(4) = 1.1e-44
Identities = 113/389 (29%), Positives = 181/389 (46%)
Query: 367 VVRMVGEVHTT--EKEGTILAFLTSKMEVEWACEKF---DAPSAVALPFHGQLSFDEQFC 421
+ R+V + G+IL FL + + D LP H L+ EQ
Sbjct: 798 ISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNTSEQRR 857
Query: 422 VFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSA 481
FK+Y +RK+I ATN+AETS+TI V VIDSG VK+ ++ + + S+++
Sbjct: 858 CFKTYT-KRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAAC 916
Query: 482 NQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEP-EIHRVHLGIAVLRILALGIR------ 534
QR GRAGR + G CY+LY++ E L Q P E+ R L L ++ L R
Sbjct: 917 QQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGN 976
Query: 535 -----DVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPR 587
++ F ID P+ +++A++ L+Q+GA+ ++ +LT G++LV L I+ +
Sbjct: 977 SVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSE---DLTGLGEYLVSLPIDLK 1033
Query: 588 LGKLILSCFRRRLG--REGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLF 645
LGKL++ F G L + A+++ S DDE A ++ + GD+
Sbjct: 1034 LGKLLV--FGSIFGYLEPALTITAILSTKSPFL----GDDE---AREIRSKQSQGWGDVL 1084
Query: 646 TLLSVYREWDSLPREERN-----KWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS 700
VY W + E R +WC E ++ +L++ + EL + L +
Sbjct: 1085 ADARVYHNWLEI-LETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQ--LLELTTK 1141
Query: 701 YWLWNPHKY-TEYDKWLKEIILSALAENV 728
N Y TE L +I +AL+ NV
Sbjct: 1142 KLTGNFDWYSTENLTVLSTLIAAALSPNV 1170
Score = 274 (101.5 bits), Expect = 1.1e-44, Sum P(4) = 1.1e-44
Identities = 75/213 (35%), Positives = 114/213 (53%)
Query: 146 DWS-RIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD 204
+WS R+++ + R + LP + R+ I+ I Q++V+ GETG GKSTQ+VQF+ D
Sbjct: 557 NWSERVKSPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILD 616
Query: 205 ----SGIAAEQSIVCTQPRKIAAISLAQRV---REESRGCYEDDSVICYPSFSSAQHFDS 257
SG Q++VCTQPR+I+AISLA+RV R+ + G SV S S +
Sbjct: 617 HYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEF 676
Query: 258 KVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIM 317
+ + QH + LS +SC++VDE HERS R +L++++M
Sbjct: 677 CTTGLLLRRIQQHGLGF--LSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILM 734
Query: 318 SATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
SAT ++ YF + G H+ GR FP+ Y+
Sbjct: 735 SATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYI 767
Score = 44 (20.5 bits), Expect = 1.1e-44, Sum P(4) = 1.1e-44
Identities = 14/67 (20%), Positives = 33/67 (49%)
Query: 98 EMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRE 157
++ ++ F+N + +YL Q++ ES+D N+ + D S +Q+ + +
Sbjct: 361 DLCFSTLQTFENNIQISSEYLQ--QHLIG-ESFDGNISLEPNSTEWDDDVSALQSILDNK 417
Query: 158 CKRLEDG 164
++E+G
Sbjct: 418 VSKIENG 424
Score = 37 (18.1 bits), Expect = 1.1e-44, Sum P(4) = 1.1e-44
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 54 NKWLKMKDDKCDEIANVSNRLGSRNSYAVFCEL 86
N W M+ K +E+ N + L + + + EL
Sbjct: 168 NIWFDMEKQKKEELKNKHSWLYNEDPFKAAKEL 200
Score = 37 (18.1 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 310 FDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVR 369
FDL + + Q+S + H++G +F ++ P +T V++ S +
Sbjct: 360 FDLCFSTLQTFENNIQISSEYLQ---QHLIGESFDGNISLEPNSTEWDDDVSALQSILDN 416
Query: 370 MVGEV 374
V ++
Sbjct: 417 KVSKI 421
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 310 (114.2 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 108/337 (32%), Positives = 157/337 (46%)
Query: 374 VHTTEKEGTILAFLTSKMEVEWACEK-------FDAPSAVALPFHGQLSFDEQFCVFKSY 426
+ T E G +L FL + + +K F LP H Q+ +EQ VF+
Sbjct: 650 IETLEVPGAVLVFLPG-WNLIYFMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPV 708
Query: 427 P-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
P G KVI +TN+AETS+TI V FV+DS K F M S+++ QR
Sbjct: 709 PDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRK 768
Query: 486 GRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFID 543
GRAGR PG C+ L S++ FE + PEI R L L I L + + F I+
Sbjct: 769 GRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGGIGNFLSKAIE 828
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL-ILSCFRRRLGR 602
P A+ A L +L A+ N+ ELT G+ L KL IEPRLGK+ I+ C +G
Sbjct: 829 PPPLDAVIEAEHTLRELDALDSND---ELTPLGRILAKLPIEPRLGKMMIMGCIFN-VGD 884
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN--GDLFT----LLSVYREWDS 656
A +A++ F ++ K ++ F HRN G F+ LLSV++ WD
Sbjct: 885 -----AVCTISAATCFPEPFINEGK------RLGFVHRNFAGSRFSDHVALLSVFQAWDE 933
Query: 657 LP---REERNKWCWENSVNAKSLRRCQDTIKELETCL 690
+ + ++C +N +LR + +L+ L
Sbjct: 934 VRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEIL 970
Score = 254 (94.5 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 65/190 (34%), Positives = 103/190 (54%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS----GIAAEQSIVCTQPRK 220
LP+ +++ I+ IY ++++ G TGCGK+TQ+ Q++ D G A++ +IV TQPR+
Sbjct: 395 LPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRR 454
Query: 221 IAAISLAQRVREESRGCYEDDSVIC-----YPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
I+A+S+A+RV E RG ED C + SF H + +++ T LL+ +
Sbjct: 455 ISAVSVAERVSFE-RG--EDVGKSCGYSVRFESFLPRPH--ASILFCTVGVLLRKL--ES 507
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
+ IS +IVDE HER D+R+++MSAT D +YF++C +
Sbjct: 508 GIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPV 567
Query: 336 SHVVGRNFPV 345
V GR PV
Sbjct: 568 IEVHGRAHPV 577
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 494 (179.0 bits), Expect = 8.0e-44, P = 8.0e-44
Identities = 141/452 (31%), Positives = 222/452 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL-VQFLADSGIAAEQSIVCTQPRKIAA 223
LPI +L I L+L G GKST +Q L G + I+ +PR++AA
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGK--IIMLEPRRLAA 61
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
++A+ + ++ G V + +++ +T+ + + ND +L + +
Sbjct: 62 RNIARYLAQQL-GEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVL 120
Query: 284 IVDEAHERSXXXXXXXXXXXXX-XCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I DE HERS R DL++V+MSAT D L GR
Sbjct: 121 IFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRG 180
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-D 401
FP+++RY P + + + + +R + + H T G++LAFL + E+ D
Sbjct: 181 FPIEIRYQPLRS--DEPLVTAMQRQIRHLLQ-HET---GSLLAFLPGAASINQLTEQLSD 234
Query: 402 APSAVAL-PFHGQLSFD-EQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 459
S V + P +GQ+ F +Q + + GRRKV+ ATN+AETSLTI G++ V+DSG+ +
Sbjct: 235 LASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERS 294
Query: 460 SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRV 519
+ F+ TG+ L R++QSSA QRAGRAGR EPG C RLYS++ + +P EPE+
Sbjct: 295 ARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHT 354
Query: 520 HLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFL 579
L L + G + +++ P + A A + L +LG + ++T GK
Sbjct: 355 DLAPLALELAQWGAQP-SDLAWLNLPPSSAFAQAQQLLQRLGLLDART---QITAAGKEA 410
Query: 580 VKLGIEPRLGKLILSCFRRRLGREGLVLAAVM 611
LG+EPR+ ++LS RLG L A +
Sbjct: 411 HLLGVEPRIAAMLLSA--DRLGESALQSALAL 440
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 494 (179.0 bits), Expect = 8.0e-44, P = 8.0e-44
Identities = 141/452 (31%), Positives = 222/452 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL-VQFLADSGIAAEQSIVCTQPRKIAA 223
LPI +L I L+L G GKST +Q L G + I+ +PR++AA
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGK--IIMLEPRRLAA 61
Query: 224 ISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
++A+ + ++ G V + +++ +T+ + + ND +L + +
Sbjct: 62 RNIARYLAQQL-GEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVL 120
Query: 284 IVDEAHERSXXXXXXXXXXXXX-XCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I DE HERS R DL++V+MSAT D L GR
Sbjct: 121 IFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRG 180
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-D 401
FP+++RY P + + + + +R + + H T G++LAFL + E+ D
Sbjct: 181 FPIEIRYQPLRS--DEPLVTAMQRQIRHLLQ-HET---GSLLAFLPGAASINQLTEQLSD 234
Query: 402 APSAVAL-PFHGQLSFD-EQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 459
S V + P +GQ+ F +Q + + GRRKV+ ATN+AETSLTI G++ V+DSG+ +
Sbjct: 235 LASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERS 294
Query: 460 SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRV 519
+ F+ TG+ L R++QSSA QRAGRAGR EPG C RLYS++ + +P EPE+
Sbjct: 295 ARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHT 354
Query: 520 HLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFL 579
L L + G + +++ P + A A + L +LG + ++T GK
Sbjct: 355 DLAPLALELAQWGAQP-SDLAWLNLPPSSAFAQAQQLLQRLGLLDART---QITAAGKEA 410
Query: 580 VKLGIEPRLGKLILSCFRRRLGREGLVLAAVM 611
LG+EPR+ ++LS RLG L A +
Sbjct: 411 HLLGVEPRIAAMLLSA--DRLGESALQSALAL 440
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 331 (121.6 bits), Expect = 3.1e-43, Sum P(3) = 3.1e-43
Identities = 92/251 (36%), Positives = 138/251 (54%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H LS +Q VF P G RK++ +TN+AET +TIP V VID+G+ +E + ++
Sbjct: 941 HSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLS 1000
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLN-QEPEIHRVHLGIAVLRI 528
L VS+++A QR+GRAGR + G CY L+SK +T+ L+ Q PEI R++L VLR+
Sbjct: 1001 RLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRV 1060
Query: 529 LALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
+ DVQ +D PS+ I A+ L Q+GA+ N +LT+ GKFL +L ++
Sbjct: 1061 KMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENE---KLTKLGKFLSQLPVDA 1117
Query: 587 RLGK-LILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN--GD 643
LGK L+L CF + + ++A M S F + S D + A+ ++ F N D
Sbjct: 1118 NLGKILVLGCFYKCVDAASSIVA--MLTIGSPFRK--SVDNEFSANKARLSFAKENTRSD 1173
Query: 644 LFTLLSVYREW 654
L + Y W
Sbjct: 1174 LVLMYYAYCAW 1184
Score = 233 (87.1 bits), Expect = 3.1e-43, Sum P(3) = 3.1e-43
Identities = 61/213 (28%), Positives = 106/213 (49%)
Query: 147 W-SRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADS 205
W ++++ + K + LP M+R+ I+ + Q+L++ G+TGCGKSTQ+ FL ++
Sbjct: 612 WRQQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLEN 671
Query: 206 GIAAEQS--IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSK----- 258
++ I T+PR+I+AISLA RV +E G S + + DSK
Sbjct: 672 STKNGKAVKIYVTEPRRISAISLANRVSQELGG--NPPSARSHELVGYSVRLDSKCTPLT 729
Query: 259 -VIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIM 317
+ Y+T L+ ++ ++ +I+DE HERS + L+++IM
Sbjct: 730 PLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIM 789
Query: 318 SATADAHQLSKYFYDCGISHVVGRNFPVDVRYV 350
SAT +A + YF + + G+ +PV Y+
Sbjct: 790 SATLNAEKFQLYFEGSNLITIPGKTYPVHRFYL 822
Score = 43 (20.2 bits), Expect = 3.1e-43, Sum P(3) = 3.1e-43
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 45 KGLMEGELVNKWLKMKDDKCDEIANVSNRLG 75
K ++GE NK K++ ++ N SN +G
Sbjct: 31 KNQVKGEKNNKTQKVEPKNAFKVENQSNDIG 61
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 292 (107.8 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 100/353 (28%), Positives = 174/353 (49%)
Query: 364 VSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK-----FDAPSAV--ALPFHGQLSF 416
VS + +++ ++ ++G IL FL ++ ++ F A SA + H +
Sbjct: 535 VSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPA 594
Query: 417 DEQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCR 475
EQ VF + PG RK++ ATN+AE+++TI V +VIDSG +KE ++P ++ L+
Sbjct: 595 GEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSW 654
Query: 476 VSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRD 535
VS+++A QR GRAGR +PG CY LYS+ + P + PEI R+ + L++ L +
Sbjct: 655 VSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PN 713
Query: 536 VQGFDFI----DAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL 591
+ DF+ D P ++I A+ L +GA+ ELTE G+ L + P + K+
Sbjct: 714 CKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQE---ELTELGEKFGHLPVHPLISKM 770
Query: 592 ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQF---CHRNGDLFTLL 648
+ L LA A+ F S E+ KA K++ C + D ++
Sbjct: 771 LFFAVLVNCLDPALTLACA-ADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVV 829
Query: 649 SVYREWDSLP-REERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS 700
+ + W + R ++C + V+ +++ +LE+ L++ IIP+
Sbjct: 830 AAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHG--IIPN 880
Score = 263 (97.6 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 75/255 (29%), Positives = 126/255 (49%)
Query: 155 VRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS-- 212
++E +L LPI ++ I + Q++++ GETGCGK+TQ+ Q+L D ++++
Sbjct: 177 LKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETC 236
Query: 213 -IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHF 271
IVCTQPR+I+A+S+++R+ E RG +++ S S V++ T+ LL+
Sbjct: 237 KIVCTQPRRISAMSVSERISCE-RGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVL 295
Query: 272 MNDRDLSRISCI---IVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSK 328
+ +S +S I IVDE HER LRL++MSAT DA + S
Sbjct: 296 VGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSG 355
Query: 329 YFYDCGISHVVGRNFPVDVRYVP-CATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFL 387
YF C + V G +PV Y+ + S +++S + + H + L
Sbjct: 356 YFGGCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISD-HKLDLTDEDKLAL 414
Query: 388 TSKMEVEWACEKFDA 402
+ + W ++FDA
Sbjct: 415 DEAIILAWTNDEFDA 429
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 298 (110.0 bits), Expect = 4.8e-43, Sum P(2) = 4.8e-43
Identities = 97/296 (32%), Positives = 145/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G K+I +TN+AETS+TI V +VIDS K F
Sbjct: 681 LPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 740
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ FE + PE+ R L L
Sbjct: 741 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIAL 800
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P A+ A L +L A+ N+ ELT G+ L KL I
Sbjct: 801 SIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPI 857
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C + G + + +A++ F E ++ ++ + HRN
Sbjct: 858 EPRFGKMMIMGC----IFYVGDAICTI--SAATCF------PEPFISEGKRLGYIHRNFA 905
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C +N +LR + +L+ L
Sbjct: 906 GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 961
Score = 255 (94.8 bits), Expect = 4.8e-43, Sum P(2) = 4.8e-43
Identities = 69/188 (36%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ QF+ D I AAE +IV TQPR+
Sbjct: 385 LPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRR 444
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+S+A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 445 ISAVSVAERVAYE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 499
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 500 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIE 559
Query: 338 VVGRNFPV 345
V GR FPV
Sbjct: 560 VYGRTFPV 567
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 298 (110.0 bits), Expect = 4.8e-43, Sum P(2) = 4.8e-43
Identities = 97/296 (32%), Positives = 145/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G K+I +TN+AETS+TI V +VIDS K F
Sbjct: 681 LPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 740
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ FE + PE+ R L L
Sbjct: 741 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIAL 800
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P A+ A L +L A+ N+ ELT G+ L KL I
Sbjct: 801 SIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPI 857
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C + G + + +A++ F E ++ ++ + HRN
Sbjct: 858 EPRFGKMMIMGC----IFYVGDAICTI--SAATCF------PEPFISEGKRLGYIHRNFA 905
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C +N +LR + +L+ L
Sbjct: 906 GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 961
Score = 255 (94.8 bits), Expect = 4.8e-43, Sum P(2) = 4.8e-43
Identities = 69/188 (36%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ QF+ D I AAE +IV TQPR+
Sbjct: 385 LPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRR 444
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+S+A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 445 ISAVSVAERVAYE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 499
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 500 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIE 559
Query: 338 VVGRNFPV 345
V GR FPV
Sbjct: 560 VYGRTFPV 567
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 303 (111.7 bits), Expect = 6.4e-43, Sum P(2) = 6.4e-43
Identities = 87/284 (30%), Positives = 149/284 (52%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H ++ DEQ F P G RK++ ATN+AET +TIP + VID+G K F+ ++
Sbjct: 955 HSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLS 1014
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE-PEIHRVHLGIAVLRI 528
L +S+++A QR GRAGR + G C+ +++K + Q+ PE+ R+ L VLR+
Sbjct: 1015 RLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRV 1074
Query: 529 LALGIRDVQG--FDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
+ +V+ + +D PS+K I AI L ++ A+ LT G+ L KL ++
Sbjct: 1075 KICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTSTEN---LTPLGQQLAKLPLDV 1131
Query: 587 RLGKLIL-SCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLF 645
LGKLI+ F + L + +AA+++ S +GS+ +K + +++ F + DL
Sbjct: 1132 FLGKLIIHGAFFKCLDA-AISIAAILSCKSPFVNTMGSNAQK---EAVRLGFRRGDSDLL 1187
Query: 646 TLLSVYREWD---SLPREERNKWCWENSVNAKSLRRCQDTIKEL 686
T+ + Y W S P +C +N ++ ++L +D +L
Sbjct: 1188 TVYNAYCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIEDVKLQL 1231
Score = 250 (93.1 bits), Expect = 6.4e-43, Sum P(2) = 6.4e-43
Identities = 61/194 (31%), Positives = 104/194 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ--SIVCTQPRKIA 222
LPI+ ++ +IL + + L++ ETG GKSTQ+ F+ + + + + I T+PR+I+
Sbjct: 645 LPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTEPRRIS 704
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKV------IYMTDHCLLQHFMNDRD 276
AISLA+RV EE G ++D A +SKV ++ T +++ D
Sbjct: 705 AISLARRVSEEL-GESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRMLERPDD 763
Query: 277 LSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGIS 336
I+ +++DE HERS +R DL+L++MSAT DA++ S Y +
Sbjct: 764 FQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVL 823
Query: 337 HVVGRNFPVDVRYV 350
++ GR FPV+ +++
Sbjct: 824 NIPGRTFPVETKFL 837
Score = 39 (18.8 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 672 NAKSLRRCQDTIKELETCLEKE 693
++K++RR D +KE++ E
Sbjct: 1094 SSKNIRRAIDALKEVKALTSTE 1115
Score = 38 (18.4 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 228 QRVREESRGCYEDDSVI 244
+++ +E+ G +EDD V+
Sbjct: 575 RKLIQENHGTFEDDVVL 591
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 299 (110.3 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 107/337 (31%), Positives = 158/337 (46%)
Query: 374 VHTTEKEGTILAFL-------TSKMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFKSY 426
+ T G +L FL T + +E + F + LP H Q+ +EQ VF
Sbjct: 645 IETLNVPGAVLVFLPGWNLIYTMQKHLEMNPD-FGSHRYQILPLHSQIPREEQRKVFDPV 703
Query: 427 P-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRA 485
P G KVI +TN+AETS+TI V +VIDS K F M S+++ QR
Sbjct: 704 PAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRK 763
Query: 486 GRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFID 543
GRAGR PG C+ L S++ FE + PE+ R L L I L + + F I+
Sbjct: 764 GRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIE 823
Query: 544 APSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL-ILSCFRRRLGR 602
P A+ A L +L A+ N+ ELT G+ L KL IEPR GK+ I+ C +G
Sbjct: 824 PPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPIEPRFGKMMIMGCIFY-VGD 879
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN--GDLFT----LLSVYREWDS 656
A +A++ F E ++ ++ + HRN G+ F+ LLSV++ WD
Sbjct: 880 -----AVCTISAATCF------PEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDD 928
Query: 657 --LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
+ EE ++C +N +LR + +L+ L
Sbjct: 929 ARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 965
Score = 252 (93.8 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 68/188 (36%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ QF+ D I AAE +IV TQPR+
Sbjct: 389 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 448
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSAQHFD-SKVIYMTDHCLLQHFMNDRDL 277
I+A+S+A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 449 ISAVSVAERVAYE-RG--EEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL--EAGI 503
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 504 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIE 563
Query: 338 VVGRNFPV 345
V GR +PV
Sbjct: 564 VYGRTYPV 571
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 292 (107.8 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 84/244 (34%), Positives = 128/244 (52%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-------DAPSAVALPFHGQLSFDEQ 419
+V +V +V +T E +IL FL ++ E + + LP H +S Q
Sbjct: 937 IVHIVTKVSSTS-EDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSSVSMQLQ 995
Query: 420 FCVFKSYPGR-RKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQ 478
VF+ P + RK++ +TN+AETS+TI V +VIDS VK Y E + + + +
Sbjct: 996 AKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACK 1055
Query: 479 SSANQRAGRAGRT-EPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQ 537
SS QR GRAGR + G CY + S+ + T Q E+ R+ L L++ L + DV
Sbjct: 1056 SSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQVKVLVLGDVI 1115
Query: 538 GF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLIL-- 593
GF + ++ P K+I+ AI L+ LGA+ N ELT G L + ++PR+GK+I+
Sbjct: 1116 GFLSEALEPPETKSIDNAINLLIDLGALNANQ---ELTPLGLQLSFIPVDPRIGKMIILG 1172
Query: 594 SCFR 597
S FR
Sbjct: 1173 SYFR 1176
Score = 249 (92.7 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 82/318 (25%), Positives = 149/318 (46%)
Query: 24 VVPSDADELEERLRNLFVDHVKGLMEGELVNKWLKMKDDKCDEIANVSNRLGSRNSYAVF 83
+ SD +L E L VD + L+E EL+ + K K +++ ++ ++
Sbjct: 585 ITESDNKKLSENLAA--VDACEYLLENELIQP--EYKAPKSSTLSDEFFKINYDIPPEIY 640
Query: 84 CELNERKKGL-FKEREMIMRRVREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDC 142
+ E + + ++ E R++ + ++ Y Q + +S++ D+ E
Sbjct: 641 QQSRETLESVTYQNNEFYPRKILQLNKKINT---YTPQ-QTLLDVKSFEELSDI-GIER- 694
Query: 143 QRFDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQF- 201
+ ++ ++ Q + + LPI+ R ++ I QI++++G+TGCGK+TQ+ QF
Sbjct: 695 RAYEHNKRQTAEYKRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFV 754
Query: 202 ---LADSGIAAEQSIVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFD-S 257
+ DSG A +IV TQPR+I+ + A+R+ E R D+V F + Q S
Sbjct: 755 IEDMIDSGHAPYCNIVMTQPRRISVLGAAERMAYE-RLEKVGDTVGYQIRFDNVQPLGTS 813
Query: 258 KVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIM 317
K++ T LL+ +D L +S + +DE HER +LR+++M
Sbjct: 814 KLLVCTPGILLKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILM 873
Query: 318 SATADAHQLSKYFYDCGI 335
SAT D +S YF C +
Sbjct: 874 SATMDNSLVSAYFGTCPV 891
Score = 63 (27.2 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 23/100 (23%), Positives = 42/100 (42%)
Query: 716 LKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLL-IFGQ---KPTWVVFGEL 771
++ II S L N+A + E ++ LHPS + +F + K WV+F E
Sbjct: 1315 IRAIICSGLFPNIAR----QRKKREFKTLSENTFLHPSSIVYNLFQELNPKENWVIFEEK 1370
Query: 772 LSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHV 811
++ +T SL +P+F+ + E + +
Sbjct: 1371 FKTKLTFIKTITRIPEISLLLFGSTPIFNQTSTENSTVSI 1410
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 499 (180.7 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 145/446 (32%), Positives = 216/446 (48%)
Query: 249 FSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCR 308
F + + +K++++T+ LL+ D L + + II+DE HER +
Sbjct: 153 FETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTK 212
Query: 309 RFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCAT-AGTSAVASYVSD- 366
R DL+L++MSAT + YF + V GR FP+DVR+ P S ++ D
Sbjct: 213 RDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDP 272
Query: 367 -----VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSA-----VALPFHGQLSF 416
++ ++ + + + G L FL E+ E + + L H LS
Sbjct: 273 EPYLKILELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKNYAELTNGWIILMLHSTLSV 332
Query: 417 DEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCR 475
+EQ VF P G RK I +TNVAETS+TI G++FVIDSG V EPGTG L
Sbjct: 333 EEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFW 392
Query: 476 VSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIR- 534
VS++SANQR GRAGRT PG CYRLYS+ FE EI+RV L L++++L +
Sbjct: 393 VSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGL 452
Query: 535 DVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNG-VFELTEEGKFLVKLGIEPRLGK-LI 592
D + F FI+ PS + + L ++ + G + LT G + KL +E + K L+
Sbjct: 453 DPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLV 512
Query: 593 LSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYR 652
C L L +AA ++ S R + E ++ + GD FTL+S++R
Sbjct: 513 YGCVVDEL-EVMLTVAAGLSVQSPFTNRSYRELEIVER---RASLTSPLGDPFTLISIFR 568
Query: 653 EWDSLPREE--RNKWCWENSVNAKSL 676
EW E +W EN ++ L
Sbjct: 569 EWVLQKAFEGTARRWTMENGIDEHRL 594
Score = 39 (18.8 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 1074 VISGLDKELSEDEILGELRK-VTTRRIRDLF-----LVRGDAVECPQFDAFEEALLRE 1125
V S ++EL + ++L ELR V RD+ L E P+ +E+ L R+
Sbjct: 938 VHSAREEELEDQKVLDELRADVMCPPTRDMIEEAEKLKELKKKEIPKESYYEKLLKRQ 995
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 298 (110.0 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 98/296 (33%), Positives = 145/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G KVI +TN+AETS+TI V +VIDS K F
Sbjct: 687 LPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 746
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ F+ + PE+ R L L
Sbjct: 747 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIAL 806
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P A+ A L +L A+ N+ ELT G+ L KL I
Sbjct: 807 SIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPI 863
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C +G A +A++ F E ++ ++ + HRN
Sbjct: 864 EPRFGKMMIMGCIFY-VGD-----AVCTISAATCF------PEPFISEGKRLGYIHRNFA 911
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C + +N +LR + +L+ L
Sbjct: 912 GNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEIL 967
Score = 250 (93.1 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 67/188 (35%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ Q++ D I AAE +IV TQPR+
Sbjct: 391 LPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRR 450
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+++A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 451 ISAVAVAERVAYE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 505
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 506 RGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIE 565
Query: 338 VVGRNFPV 345
V GR FPV
Sbjct: 566 VYGRTFPV 573
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 495 (179.3 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 150/475 (31%), Positives = 227/475 (47%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAAI 224
LP+ D+L + VL G GK+T++ L D+ + I+ +PR++AA
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 225 SLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCI 283
+ A R S G E + + Y F ++V +T+ L + +D L + +
Sbjct: 64 NAA-RWMARSLG-EEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAV 121
Query: 284 IVDEAHERSXXXXXXXXXXXXXXCR-RFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 342
I DE HERS R DLR+++MSAT A ++ D + GRN
Sbjct: 122 IFDEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRN 181
Query: 343 FPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKF-- 400
+PV +R++P + S V+ VR+ E EG ILAFL E+ C +
Sbjct: 182 YPVALRHIP--PNDRENLPSAVARAVRIA----VRECEGDILAFLPGVGEIR-RCGQLLA 234
Query: 401 -DAP--SAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMV 457
D P + + +P +G L F EQ PGRRKV+ AT +AETSLTI GV+ V+D G
Sbjct: 235 DDPPLHAPLVVPLYGDLPFVEQERAILPVPGRRKVVLATTIAETSLTIEGVRVVVDGGQT 294
Query: 458 KESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIH 517
+ ++P +G+N L RVS +SA QRAGRAGR PG CYRL+ + D + PEI
Sbjct: 295 RRLRYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLAADPPEIL 354
Query: 518 RVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGK 577
L L + G+ D ++D P A+E A RNL++ ++ +G +TE G+
Sbjct: 355 IADLAPLALDLAHWGVSDPASLAWLDPPPRGALEEA-RNLLK--SLDALDGQGMITETGR 411
Query: 578 FLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADC 632
+ +L + PRL ++L R +AA++ I G+ +A C
Sbjct: 412 RMAELPLHPRLAHMLLRATERGPAPLACDVAALLTERD-IVRSAGTGQAAERAGC 465
Score = 37 (18.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 643 DLFTLLSVYREWDSLPR 659
DL T L WD L R
Sbjct: 717 DLLTPLKALLSWDQLRR 733
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 295 (108.9 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 98/296 (33%), Positives = 144/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G KVI +TN+AETS+TI V +VIDS K F
Sbjct: 684 LPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 743
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ FE + PE+ R L L
Sbjct: 744 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIAL 803
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P A+ A L +L A+ N+ ELT G+ L KL I
Sbjct: 804 SIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPI 860
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C + G + + A ++ F ++ K ++ + HRN
Sbjct: 861 EPRFGKMMIMGC----IFYVGDAICTIAA--ATCFPEPFINEGK------RLGYIHRNFA 908
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C +N +LR + +L+ L
Sbjct: 909 GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 964
Score = 252 (93.8 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 68/188 (36%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ QF+ D I AAE +IV TQPR+
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 447
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+S+A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 448 ISAVSVAERVAFE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 502
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 503 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIE 562
Query: 338 VVGRNFPV 345
V GR +PV
Sbjct: 563 VYGRTYPV 570
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 296 (109.3 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 97/296 (32%), Positives = 145/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G KVI +TN+AETS+TI V +VIDS K F
Sbjct: 676 LPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 735
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ F+ + PE+ R L L
Sbjct: 736 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIAL 795
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P A+ A L +L A+ N+ ELT G+ L KL I
Sbjct: 796 SIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPI 852
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C + G + + +A++ F E ++ ++ + HRN
Sbjct: 853 EPRFGKMMIMGC----IFYVGDAICTI--SAATCF------PEPFISEGKRLGYIHRNFA 900
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C +N +LR + +L+ L
Sbjct: 901 GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 956
Score = 251 (93.4 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 68/188 (36%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ QF+ D I AAE +IV TQPR+
Sbjct: 384 LPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 443
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+S+A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 444 ISAVSVAERVAYE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 498
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 499 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIE 558
Query: 338 VVGRNFPV 345
V GR +PV
Sbjct: 559 VYGRTYPV 566
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 295 (108.9 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 98/296 (33%), Positives = 144/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G KVI +TN+AETS+TI V +VIDS K F
Sbjct: 684 LPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 743
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ FE + PE+ R L L
Sbjct: 744 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIAL 803
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P A+ A L +L A+ N+ ELT G+ L KL I
Sbjct: 804 SIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND---ELTPLGRILAKLPI 860
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C + G + + A ++ F ++ K ++ + HRN
Sbjct: 861 EPRFGKMMIMGC----IFYVGDAICTIAA--ATCFPEPFINEGK------RLGYIHRNFA 908
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C +N +LR + +L+ L
Sbjct: 909 GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL 964
Score = 252 (93.8 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 68/188 (36%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ QF+ D I AAE +IV TQPR+
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 447
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+S+A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 448 ISAVSVAERVAFE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 502
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 503 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIE 562
Query: 338 VVGRNFPV 345
V GR +PV
Sbjct: 563 VYGRTYPV 570
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 478 (173.3 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 182/701 (25%), Positives = 319/701 (45%)
Query: 128 ESYDANVD-VFRFEDCQR--FDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQIL 184
+S D + + V ED + FD + + K E+ LPI+ + + + Q++
Sbjct: 23 DSSDGDEEGVLACEDLELNPFDGLPYSSRYYKLLKEREE-LPIWKEKYSFMESLLQNQVV 81
Query: 185 VLIGETGCGKSTQLVQFLADSGIAAEQS---IVCTQPRKIAAISLAQRVREESRGCYEDD 241
V+ G++ CGKS+Q+ Q+ A+ ++ ++CTQ K A+ LA RV +E +
Sbjct: 82 VVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHE 141
Query: 242 SVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXX 301
P F + ++ + Y TD L + M++ L II+D+ HERS
Sbjct: 142 VGYVIP-FENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGL 200
Query: 302 XXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVA 361
R +L+L++ + +LS Y+ D + V ++ PV+V Y+ A
Sbjct: 201 LKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNKH-PVEVVYLSGAQKD----- 254
Query: 362 SYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLS----FD 417
S+ S V+R++ E+H + ++G ++ FL + ++E E + P G L +
Sbjct: 255 SFES-VIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLYP 313
Query: 418 EQFC-VFKSYPG--------RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGM 468
++ C +F+ +R+V+ T+ E+ + VKFVID G+ + + P
Sbjct: 314 KEKCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRA 373
Query: 469 NVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK--SDFETRPLNQEPEIHRVHLGIAVL 526
N L + +SQS A R G + G+ + LY++ + + RPL + E+ +L VL
Sbjct: 374 NSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPL-KPAEMQEANLTSMVL 432
Query: 527 RILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
+ + I + DF++ P+ +++ A+ +L L A+ N+G L+E G + + ++P
Sbjct: 433 FMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALD-NDG--NLSEFGIIMSEFPLDP 489
Query: 587 RLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFT 646
+L K IL+ E L +AA M A S F V E+ C K F H GD FT
Sbjct: 490 QLSKSILASCEFDCVDEMLTIAA-MVTAPSCFLHVPHGAEEAAVTCWKT-FLHPEGDHFT 547
Query: 647 LLSVYREWDSLPREERNK-----WCWENSVNAKSLRRCQDTIK-ELETCLEK-ELAIIIP 699
L++VY + N+ WC + ++ +LR D I+ EL +++ EL P
Sbjct: 548 LINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMA-DVIRAELLEIIKRIELPYAEP 606
Query: 700 SYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHV-QLHPSCSLLI 758
++ E +K+ +LS +A D G + +T + V QLHP S I
Sbjct: 607 AFGS------KENGLNIKKALLSGYFMQIAR--DVDGSGNYLMLTHKQVAQLHPLSSYSI 658
Query: 759 FGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLF 799
+ P WV+F + N Y+ +A + L P F
Sbjct: 659 TKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYYF 699
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 356 (130.4 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 102/328 (31%), Positives = 169/328 (51%)
Query: 364 VSDVVRMVGEVHTTE--KEGTILAFLTSKMEVEWACEKFDAPSA---VALPFHGQLSFDE 418
++ V R + + T E ++G+IL FL +E+ ++ + S +ALP H L+ E
Sbjct: 802 IAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSGLTSAE 861
Query: 419 QFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVS 477
Q +FK+ P G+RKV+ +TN+AETS+TIP VID+G K +F+ L S
Sbjct: 862 QKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCS 921
Query: 478 QSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQ 537
Q+ QR GRAGR G CY LY+K FE PEI R L L + ++GI +V
Sbjct: 922 QAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVN 981
Query: 538 GF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL-ILS 594
F +DAP +++ A + L ++GA++ N+ LT+ G ++ L +P+ KL IL
Sbjct: 982 EFLSSGLDAPDKSSLDKANQFLHEIGALQENS----LTKLGNYISYLPTDPQSAKLLILG 1037
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREW 654
C L L LAA+ + S + S +++ K ++ +F + GD ++ + Y +
Sbjct: 1038 CIFGCLDI-CLTLAAISSTGSPF---INSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY 1093
Query: 655 DSLPREERNKWCWENSVNAKSLRRCQDT 682
S + ++ EN ++ +++ T
Sbjct: 1094 MS---NKSKRFLTENYLSYTTIKDITST 1118
Score = 198 (74.8 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 54/195 (27%), Positives = 96/195 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ---SIVCTQPRKI 221
LP + ++ ++ I Q+ ++ GETG GKSTQ+VQF+ D + I+CTQPR++
Sbjct: 573 LPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQPRRL 632
Query: 222 AAISLAQRVREE--SRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRD--- 276
+A+SLA R+ +E E +I + +S+ ++++ + T LL+ + +
Sbjct: 633 SAVSLADRISKERVDEVGSETGYIIRGENKTSS---NTRITFATTGVLLRMLQSSKKNGV 689
Query: 277 LSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD-CGI 335
L I I++DE HERS L+++++SAT +F
Sbjct: 690 LKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPLTP 749
Query: 336 SHVVGRNFPVDVRYV 350
H+ GR +P+ Y+
Sbjct: 750 LHIEGRTYPIQDFYL 764
Score = 42 (19.8 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 11/63 (17%), Positives = 33/63 (52%)
Query: 40 FVDHVKGLMEGELVNKWLKMKDDKCD---EIANVSNRLGSRNSYAVFCELNERKKGLFKE 96
++ ++K L+ + W +++D++ E + ++ + N + V+ + E ++ KE
Sbjct: 139 YIKNMKMLLPIIFRDYWNELEDERLKLLKENKELHDKRYNTNPFTVYLQQRENEEKKAKE 198
Query: 97 REM 99
R++
Sbjct: 199 RQI 201
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 356 (130.4 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 102/328 (31%), Positives = 169/328 (51%)
Query: 364 VSDVVRMVGEVHTTE--KEGTILAFLTSKMEVEWACEKFDAPSA---VALPFHGQLSFDE 418
++ V R + + T E ++G+IL FL +E+ ++ + S +ALP H L+ E
Sbjct: 802 IAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSGLTSAE 861
Query: 419 QFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVS 477
Q +FK+ P G+RKV+ +TN+AETS+TIP VID+G K +F+ L S
Sbjct: 862 QKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCS 921
Query: 478 QSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQ 537
Q+ QR GRAGR G CY LY+K FE PEI R L L + ++GI +V
Sbjct: 922 QAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVN 981
Query: 538 GF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKL-ILS 594
F +DAP +++ A + L ++GA++ N+ LT+ G ++ L +P+ KL IL
Sbjct: 982 EFLSSGLDAPDKSSLDKANQFLHEIGALQENS----LTKLGNYISYLPTDPQSAKLLILG 1037
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREW 654
C L L LAA+ + S + S +++ K ++ +F + GD ++ + Y +
Sbjct: 1038 CIFGCLDI-CLTLAAISSTGSPF---INSYEQRDKLKQIQKKFGNGQGDFISMANAYNAY 1093
Query: 655 DSLPREERNKWCWENSVNAKSLRRCQDT 682
S + ++ EN ++ +++ T
Sbjct: 1094 MS---NKSKRFLTENYLSYTTIKDITST 1118
Score = 198 (74.8 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 54/195 (27%), Positives = 96/195 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ---SIVCTQPRKI 221
LP + ++ ++ I Q+ ++ GETG GKSTQ+VQF+ D + I+CTQPR++
Sbjct: 573 LPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQPRRL 632
Query: 222 AAISLAQRVREE--SRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRD--- 276
+A+SLA R+ +E E +I + +S+ ++++ + T LL+ + +
Sbjct: 633 SAVSLADRISKERVDEVGSETGYIIRGENKTSS---NTRITFATTGVLLRMLQSSKKNGV 689
Query: 277 LSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYD-CGI 335
L I I++DE HERS L+++++SAT +F
Sbjct: 690 LKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPLTP 749
Query: 336 SHVVGRNFPVDVRYV 350
H+ GR +P+ Y+
Sbjct: 750 LHIEGRTYPIQDFYL 764
Score = 42 (19.8 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 11/63 (17%), Positives = 33/63 (52%)
Query: 40 FVDHVKGLMEGELVNKWLKMKDDKCD---EIANVSNRLGSRNSYAVFCELNERKKGLFKE 96
++ ++K L+ + W +++D++ E + ++ + N + V+ + E ++ KE
Sbjct: 139 YIKNMKMLLPIIFRDYWNELEDERLKLLKENKELHDKRYNTNPFTVYLQQRENEEKKAKE 198
Query: 97 REM 99
R++
Sbjct: 199 RQI 201
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 476 (172.6 bits), Expect = 4.4e-42, P = 4.4e-42
Identities = 176/692 (25%), Positives = 319/692 (46%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQ---SIVC 215
K ED LPI+ + + ++ QI+++ G+ CGKS+Q+ Q+ A+ ++ + +VC
Sbjct: 57 KERED-LPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVVC 115
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQ K A+ LA RV +E + P F + ++ + Y TD L + M++
Sbjct: 116 TQVHKPTAVQLALRVADEMDVNIGHEVGYVIP-FENCCTSETILRYCTDDMLQREMMSNP 174
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
L II+D+ HERS R +L+L+I S+ ++LS Y+ + +
Sbjct: 175 FLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYGNVPL 234
Query: 336 SHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 395
V ++ PV+ Y+ +G S+ S ++R++ E+H + ++G I+ FL + ++E
Sbjct: 235 IQVKNKH-PVEAVYL----SGAQK-ESFES-ILRLIFEIHHSGEKGDIVVFLACEQDIEK 287
Query: 396 ACEKFDAPSAVALPFHGQLS----FDEQFCVF--------KSYPG-RRKVIFATNVAETS 442
A E + P G+L + ++ C K P +R+V+ + E+
Sbjct: 288 AYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPNDETEKRCPVYQRRVVLTASSGESL 347
Query: 443 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 502
+ VKFVID G+ + + P + L +SQS A R + G+ + LYS+
Sbjct: 348 ICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLYSE 407
Query: 503 SDFETRPLNQ-EP-EIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQL 560
+F +R + +P E+ +L VL + + I + DF++ P+ +++ A+ +L L
Sbjct: 408 -EFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYL 466
Query: 561 GAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCR 620
A+ N+G L+E G + + ++P+L K IL+ E L +AA M A + F
Sbjct: 467 AALD-NDG--NLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAA-MVTAPNCFSH 522
Query: 621 VGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN-----KWCWENSVNAKS 675
+ E+ C K F H +GD FTL+++Y+ + + + KWC + +N +
Sbjct: 523 LPRGAEEAALSCWKT-FLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSA 581
Query: 676 LRRCQDTIKELETCLEK-ELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGY 734
LR + EL +++ EL P++ K + +K+ +LS +A
Sbjct: 582 LRTAEVIRAELLEIIKRIELPYTEPAFG----SKENTLN--IKKALLSGYFMQIAR--DV 633
Query: 735 DQLGYEVAMTGQHV-QLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTL 793
D G + +T + V QLHP + + P WV+F + NN Y+ + + L
Sbjct: 634 DGAGNYLMLTHKQVAQLHPLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQL 693
Query: 794 CPSPLF-DVSMMERKKLHVRVITGFGSILLKK 824
P F ++ E K + +V+ I K
Sbjct: 694 APQYYFSNLPPSESKDILQQVMDHLSPISTSK 725
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 474 (171.9 bits), Expect = 7.5e-42, P = 7.5e-42
Identities = 174/667 (26%), Positives = 302/667 (45%)
Query: 159 KRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS---IVC 215
K ED LPI+ + + + QI+++ G+ CGKS+Q+ Q+ A+ ++ +VC
Sbjct: 57 KERED-LPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVC 115
Query: 216 TQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDR 275
TQ K A+ LA RV +E + P F + ++ + Y TD L + M+
Sbjct: 116 TQVHKPTAVQLALRVADEMDVNIGHEVGYMIP-FENCCSSETILRYCTDDMLQREMMSSP 174
Query: 276 DLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGI 335
L II+D+ HERS R +L+L+I S+ +LS Y+ + +
Sbjct: 175 FLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPL 234
Query: 336 SHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 395
V + PV+V Y+ + A + ++R++ E+H + ++G I+ FL + ++E
Sbjct: 235 IEVK-KQHPVEVVYL------SGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEK 287
Query: 396 ACEKFDAPSAVALPFHGQLS----FDEQFC-VFKSYPG--------RRKVIFATNVAETS 442
A E + P G+L + ++ C +FK +R+V+ + E+
Sbjct: 288 AYEIVCQEGSNLNPDLGELVVVPLYPKEKCALFKPNDETEKRCQVYQRRVVLTASSGESL 347
Query: 443 LTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK 502
+ V+FVID G+ + + P N L +SQS A R G + G+ + LYS+
Sbjct: 348 IWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLYSE 407
Query: 503 --SDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQL 560
+ + RPL + E+ +L VL + + I + DF++ P+ +++ A+ +L L
Sbjct: 408 EFASKDMRPL-KPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYL 466
Query: 561 GAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCR 620
A+ N+G L+E G + + ++P+L K IL+ E L +AA M A + F
Sbjct: 467 AALD-NDG--NLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAA-MVTAPNCFSN 522
Query: 621 VGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPREERN-----KWCWENSVNAKS 675
+ E+ C K F H GD FTL+++Y+ + + + KWC + +N +
Sbjct: 523 LPHGAEEAALTCWKT-FLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCA 581
Query: 676 LRRCQDTIKE--LETCLEKELAIIIPSYWLWNPHKYTEYDKWLKEIILSALAENVAMFSG 733
LR D I+ LE EL P++ K + +K+ +LS +A
Sbjct: 582 LRMA-DVIRAELLEIVKRIELPCAEPAFG----SKENALN--IKKALLSGYFMQIAR--D 632
Query: 734 YDQLGYEVAMTGQHV-QLHPSCSLLIFGQKPTWVVFGELLSVNNQYLVCVTAFDFDSLST 792
D G + +T + V QLHP S I + P WV+F + N Y+ + +
Sbjct: 633 VDGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQ 692
Query: 793 LCPSPLF 799
L P F
Sbjct: 693 LAPPYYF 699
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 260 (96.6 bits), Expect = 1.2e-41, Sum P(4) = 1.2e-41
Identities = 68/211 (32%), Positives = 111/211 (52%)
Query: 381 GTILAFLTSKMEVEWACEKFDA--------PSAVALPFHGQLSFDEQFCVFKSYP-GRRK 431
GTIL FL +++ + D + + LP H Q++ +FKS P RK
Sbjct: 645 GTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRK 704
Query: 432 VIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRT 491
+I ATN+AE S+TI V FV+D+G VKE F+ ++ L V +++S+A+QR+GRAGR
Sbjct: 705 IILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRV 764
Query: 492 EPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFI----DAPSA 547
G C RLY++ ++ + P Q E+ R + L + ++ +F+ + P
Sbjct: 765 ANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEK 824
Query: 548 KAIEMAIRNLVQLGAIKLNNGVFELT--EEG 576
++I AI L Q+GA +++ + EEG
Sbjct: 825 ESILQAITFLEQIGAFYTPIKIYDNSGNEEG 855
Score = 233 (87.1 bits), Expect = 1.2e-41, Sum P(4) = 1.2e-41
Identities = 65/201 (32%), Positives = 104/201 (51%)
Query: 156 RECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSI-- 213
+E +++ + LP Y +L+ I ++++ G TGCGK+TQ+ QF+ D + +
Sbjct: 172 KELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRV 231
Query: 214 VCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMN 273
+ TQPR+IAAIS+A+RV E RG +V S + D+ + Y T LL+ +
Sbjct: 232 MVTQPRRIAAISIAERVARE-RGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTS 290
Query: 274 DRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAH-QL-SKYF- 330
D S I+ I++DE HER R DL++++MSAT + + QL S YF
Sbjct: 291 DPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFE 350
Query: 331 -YDCGISHVVGRNFPVDVRYV 350
+ + + R F V V Y+
Sbjct: 351 NHSMDVIRIESRAFDVKVFYL 371
Score = 95 (38.5 bits), Expect = 1.2e-41, Sum P(4) = 1.2e-41
Identities = 35/191 (18%), Positives = 89/191 (46%)
Query: 571 ELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKA 630
ELT+ G+ + +L ++P+L +++L + + L A++A+ + S+D +++
Sbjct: 872 ELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLAL-SEDRDLQS 930
Query: 631 DCLKVQFCHRN-GDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKEL-ET 688
+K + ++ D + + E+ S ++N++C ++ +N ++R Q T ++L
Sbjct: 931 K-MKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLRE 989
Query: 689 CLEKELAIIIPS---YWLWNPHKYTEYDK-W--LKEIILSALAENVAMFSGYDQLGYEVA 742
+ +L I P+ + H + ++ + W ++ +I + + + + L
Sbjct: 990 LVRAKLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIGVSASESNLKKVQT 1049
Query: 743 MTGQHVQLHPS 753
+ LHPS
Sbjct: 1050 FNDKPAFLHPS 1060
Score = 55 (24.4 bits), Expect = 1.2e-41, Sum P(4) = 1.2e-41
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 980 PDTAGKATELNGVEYNGSLLKVVPSRATLGGDNKMYTFPAV 1020
PDT GK T L +E +L+++ R L +NK Y F V
Sbjct: 1188 PDTFGKQTSLADLE----MLELI--RYVLESENKRYNFAPV 1222
Score = 39 (18.8 bits), Expect = 5.3e-40, Sum P(4) = 5.3e-40
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 776 NQYLVCVTAFDFDSLST 792
NQY FDF S++T
Sbjct: 1344 NQYQSWTPQFDFHSMNT 1360
Score = 37 (18.1 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 403 PSAVALPFHGQLSFDEQ 419
PS AL F G + DE+
Sbjct: 1105 PSMTALLFTGPIRLDER 1121
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 472 (171.2 bits), Expect = 1.2e-41, P = 1.2e-41
Identities = 180/709 (25%), Positives = 322/709 (45%)
Query: 135 DVFRFEDCQR--FDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGC 192
+V ED + FD + + K ED LPI+ + + + QI+++ G+ C
Sbjct: 31 EVLACEDLELNPFDGLPYSSRYYKLLKERED-LPIWKEKYSFMENLLQNQIVIVSGDAKC 89
Query: 193 GKSTQLVQFLADSGIAAEQS---IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSF 249
GKS Q+ Q+ A+ ++ ++CTQ K + LA RV +E + P F
Sbjct: 90 GKSAQVPQWCAEYCLSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIP-F 148
Query: 250 SSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRR 309
+ ++ + Y TD L + M++ L II+D+ HERS R
Sbjct: 149 ENCCTNETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLAR 208
Query: 310 FDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVSDVVR 369
+L+L+I S+ +L+ Y+ + + V ++ PV+V Y+ + A ++R
Sbjct: 209 PELKLIINSSPHLISKLNSYYGNVPVIEVKNKH-PVEVVYL------SEAQKDSFESILR 261
Query: 370 MVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLS----FDEQFC-VFK 424
++ E+H + ++G I+ FL + ++E CE S + P G+L + ++ C +FK
Sbjct: 262 LIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQGSNLN-PDLGELVVVPLYPKEKCSLFK 320
Query: 425 SYPG--------RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRV 476
+R+V+ T+ E + V+FVID G+ + + P N L + +
Sbjct: 321 PLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPI 380
Query: 477 SQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQ-EP-EIHRVHLGIAVLRILALGIR 534
SQS A R G + G+ + LY++ +F ++ + +P E+ +L VL + + I
Sbjct: 381 SQSQAEIRKQILGSSSSGKFFCLYTE-EFASKDMTPLKPAEMQEANLTSMVLFMKRIDIA 439
Query: 535 DVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILS 594
+ DF++ P+ +++ A+ +L L A+ N+G L+E G + + ++P+L K IL+
Sbjct: 440 GLGHCDFMNRPAPESLMQALEDLDYLAALD-NDG--NLSEFGIIMSEFPLDPQLSKSILA 496
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREW 654
E L +AA M A + F V E+ C K F H GD FTL+S+Y+ +
Sbjct: 497 SCEFDCVDEVLTIAA-MVTAPNCFSHVPHGAEEAALTCWKT-FLHPEGDHFTLISIYKAY 554
Query: 655 DSLPREERN-----KWCWENSVNAKSLRRCQDTIK-ELETCLEK-ELAIIIPSYWLWNPH 707
+ KWC + +N +LR D I+ EL +++ EL P++
Sbjct: 555 QDTTLNSSSEYCVEKWCRDYFLNCSALRMA-DVIRAELLEIIKRIELPYAEPAFG----S 609
Query: 708 KYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHV-QLHPSCSLLIFGQKPTWV 766
K + +K+ +LS +A D G + +T + V QLHP I + P WV
Sbjct: 610 KENTLN--IKKALLSGYFMQIAR--DVDGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWV 665
Query: 767 VFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLF-DVSMMERKKLHVRVI 814
+F + N Y+ + + L P F ++ E K + +V+
Sbjct: 666 LFHKFSISENNYIRITSEISPELFMQLVPQYYFSNLPPSESKDILQQVV 714
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 307 (113.1 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 84/234 (35%), Positives = 130/234 (55%)
Query: 392 EVEWACEKFDA---PSAV-ALPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIP 446
E E+ E+ +A PS + LP + L EQ VF+ P G R V+ ATNVAETSLTIP
Sbjct: 658 EEEFKIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIP 717
Query: 447 GVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFE 506
G+++V DSG KE ++ TG+ V +S++SANQR GRAGRT PG C+RLYS + +E
Sbjct: 718 GIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYE 777
Query: 507 TRPLNQE--PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIK 564
R L++ PE+ R L VL++ ++ ++ V F F P ++ + + L + A+
Sbjct: 778 -RDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVS 836
Query: 565 LNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIF 618
G +T+ G + + PR +++L + + L A ++ A+ IF
Sbjct: 837 -EEG--RVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALS-AAEIF 886
Score = 225 (84.3 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 76/246 (30%), Positives = 112/246 (45%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQS-----IVCTQPR 219
LP+ Q I+ I+ I+V+ G TG GK+TQ+ QFL ++G + S I TQPR
Sbjct: 357 LPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGMIGITQPR 416
Query: 220 KIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHFMNDRDLS 278
++AA+S+++RV EE G + + Y F + D+ V +MTD LL+ D L
Sbjct: 417 RVAAVSMSKRVAEEL-G--DHSQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQDLALR 473
Query: 279 RISCIIVDEAHERSXXXXXXXXXXXXXXCRRFD----------LRLVIMSATADAHQLSK 328
+ S I+VDEAHERS R + L+LVIMSAT L++
Sbjct: 474 KYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRIEDLTE 533
Query: 329 YFYDCGISHVVGRNFPVDVRYVPCATA-GTSAVASYVSDVVRMVGEVHTTEKEGTILAFL 387
+ + V+ R P YV + R + H G +L FL
Sbjct: 534 ---NKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGMLVFL 590
Query: 388 TSKMEV 393
T + E+
Sbjct: 591 TGQNEI 596
Score = 54 (24.1 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 637 FCHRNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAI 696
F D +L V E+ P E KWC + V K L+ Q +++ L+
Sbjct: 932 FLDDKSDAIKMLQVLGEFAHEPTE---KWCESHFVRFKVLKEAQKLRQQIVQLLKTN--- 985
Query: 697 IIPSYWLWN-PHKY---TEYD-KWLKEIILSALAENVAM 730
IPS+ N K TE K LK+++ + + VA+
Sbjct: 986 -IPSFANINFQDKLDAPTEKQVKALKQMVAAGFIDRVAI 1023
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 471 (170.9 bits), Expect = 2.6e-41, P = 2.6e-41
Identities = 149/472 (31%), Positives = 236/472 (50%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQL-VQFLADSGIAAEQSIVCTQPRKIAA 223
LP+ ++L + ++L TG GKST L +Q LA GI + I+ +PR++AA
Sbjct: 4 LPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGK--IILLEPRRLAA 61
Query: 224 ISLAQRVRE---ESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
++AQR+ E E G D+V + ++++ +T+ L + D +LS +
Sbjct: 62 RNVAQRLAELLNEKPG----DTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGV 117
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCR-RFDLRLVIMSATADAHQLSKYFYDCGISHVV 339
+I+DE HERS R DL+L+IMSAT D +L + + +
Sbjct: 118 GLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISE 177
Query: 340 GRNFPVDVRYVPCATAGT--SAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWAC 397
GR+FPV+ RY+P AVA ++++R ++ G++L FL E++
Sbjct: 178 GRSFPVERRYLPLPAHQRFDDAVAVATAEMLR--------QESGSLLLFLPGVGEIQRVQ 229
Query: 398 EKFDAP--SAVAL-PFHGQLSF-DEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVID 453
E+ + S V L P +G LS D++ + + G RKV+ ATN+AETSLTI G++ V+D
Sbjct: 230 EQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVD 289
Query: 454 SGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQE 513
+ + F+P TG+ L RVSQ+S QRAGRAGR EPG L +K E E
Sbjct: 290 CAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSE 349
Query: 514 PEIHRVHLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELT 573
PEI + L ++ +L G D ++D P + A R L LGA++ G L+
Sbjct: 350 PEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALE---GE-RLS 405
Query: 574 EEGKFLVKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDD 625
+G+ + LG +PRL +++S +AA++ R+G+ D
Sbjct: 406 AQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPP----RMGNSD 453
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 299 (110.3 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 99/296 (33%), Positives = 145/296 (48%)
Query: 408 LPFHGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGT 466
LP H Q+ +EQ VF P G KVI +TN+AETS+TI V +VIDS K F
Sbjct: 686 LPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHN 745
Query: 467 GMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVL 526
M S+++ QR GRAGR PG C+ L S++ F+ + PE+ R L L
Sbjct: 746 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIAL 805
Query: 527 RILALGIRDVQGF--DFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGI 584
I L + + F I+ P AI A L +L A+ N+ ELT G+ L KL I
Sbjct: 806 SIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDAND---ELTPLGRILAKLPI 862
Query: 585 EPRLGKL-ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-- 641
EPR GK+ I+ C +G A +A++ F E ++ ++ + HRN
Sbjct: 863 EPRFGKMMIMGCIFY-VGD-----AVCTISAATCF------PEPFISEGKRLGYIHRNFA 910
Query: 642 GDLFT----LLSVYREWDS--LPREERN-KWCWENSVNAKSLRRCQDTIKELETCL 690
G+ F+ LLSV++ WD + EE ++C + +N +LR + +L+ L
Sbjct: 911 GNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEIL 966
Score = 252 (93.8 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 67/188 (35%), Positives = 101/188 (53%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGI----AAEQSIVCTQPRK 220
LP+ + +IL I ++++ G TGCGK+TQ+ Q++ D I AAE +IV TQPR+
Sbjct: 390 LPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRR 449
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPS--FSSA-QHFDSKVIYMTDHCLLQHFMNDRDL 277
I+A+++A+RV E RG E+ C S F S + +++ T LL+ + +
Sbjct: 450 ISAVAVAERVAYE-RG--EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGI 504
Query: 278 SRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISH 337
IS +IVDE HER ++R+V+MSAT D +YF++C I
Sbjct: 505 RGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIE 564
Query: 338 VVGRNFPV 345
V GR FPV
Sbjct: 565 VYGRTFPV 572
Score = 37 (18.1 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1034 FAVVKCDATDVEFLVKDFFDLAIGGRYVRCEIGRRSMDAVVI 1075
FA K + + D+ L I C R +M+A+V+
Sbjct: 1072 FASKKVQSDGQIVFIDDWIRLQISHEAAACITIRAAMEALVV 1113
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 286 (105.7 bits), Expect = 3.5e-41, Sum P(2) = 3.5e-41
Identities = 82/272 (30%), Positives = 134/272 (49%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H + +Q V K+ P G RK+I +TN+AETS+T+ V FVIDSG +KE F+ + +
Sbjct: 573 HSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVT 632
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRIL 529
+L+ +S++SA QR GRAGR PG C+ L+S+ F+ Q PE+ R+ L L
Sbjct: 633 MLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTK 692
Query: 530 ALGIRDVQGFDFI----DAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIE 585
L + DF+ D P A + AI+ L ++ A+ + +LTE G L +L +E
Sbjct: 693 LLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWE---DLTELGYHLAELPVE 749
Query: 586 PRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLF 645
P LGK++L + L +A +A + ++ C K D
Sbjct: 750 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHM 809
Query: 646 TLLSVYREWDSLPREERNK-WCWENSVNAKSL 676
LL ++ W + + +C +N ++ ++
Sbjct: 810 VLLRAFQAWQKARSDGWERVFCEKNFLSQATM 841
Score = 250 (93.1 bits), Expect = 3.5e-41, Sum P(2) = 3.5e-41
Identities = 75/276 (27%), Positives = 131/276 (47%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQS 212
E LP++ +++I++ I ++++++GETG GK+TQ+ QFL D +G+
Sbjct: 95 EYDSFRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCR-- 152
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
I CTQPR++A I++A+RV E R + + Y S + + + T+ LL+
Sbjct: 153 IFCTQPRRLAVIAVAERVAAERRE--KVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTL 210
Query: 272 M-NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
M D LS ++ +IVDE HER + +L+L+I SA DA+ KYF
Sbjct: 211 MAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYF 270
Query: 331 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVS-DVVRMVGEVHTTEKEGTILAFLTS 389
C + H+ GR F V ++ T Y + ++++ E EK+ + L
Sbjct: 271 GSCPVIHIQGRPFEVKEMFLEDILRSTG----YTNKEMIKYKKEKQREEKQQSTLT---- 322
Query: 390 KMEVEWACEKFDAPSAVALPFHGQLSFDEQFCVFKS 425
EW C + ++ + + S E++ + S
Sbjct: 323 ----EWCCAQENSSNPESRRRRSVASVSEEYNLLDS 354
Score = 37 (18.1 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 927 VDVYHSNANILDDKELL 943
V + HSN LD K +L
Sbjct: 569 VFMLHSNMQTLDQKNVL 585
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 294 (108.6 bits), Expect = 4.6e-41, Sum P(2) = 4.6e-41
Identities = 87/271 (32%), Positives = 133/271 (49%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H + +Q V K+ P G RK+I +TN+AETS+T+ V FVIDSG VKE F+ +
Sbjct: 662 HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT 721
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRIL 529
+L++ +S++SA QR GRAGR PG C+RL+S+ F+ Q PE+ R+ L L
Sbjct: 722 MLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK 781
Query: 530 ALGIRDVQGFDFI-DAPSAKAIEMAIRNLVQ-LGAIKLNNGVFELTEEGKFLVKLGIEPR 587
L + DF+ AP + +RN VQ L I + +LTE G L L +EP
Sbjct: 782 LLAPVNCPIADFLMKAPEPPPA-LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPH 840
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
LGK++L + L +A +A + ++ C K D L
Sbjct: 841 LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMAL 900
Query: 648 LSVYREWDSLPRE--ERNKWCWENSVNAKSL 676
L ++ W + ER +C +N ++ ++
Sbjct: 901 LRAFQAWQKARSDGWER-AFCEKNFLSQATM 930
Score = 241 (89.9 bits), Expect = 4.6e-41, Sum P(2) = 4.6e-41
Identities = 62/196 (31%), Positives = 101/196 (51%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQS 212
E LP++ +++I++ I ++++++GETG GK+TQ+ QFL D +GI
Sbjct: 184 EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-- 241
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVI--YMTDHCLLQH 270
I CTQPR++AAI++A+RV E R I Y ++ K + + T+ LL+
Sbjct: 242 IFCTQPRRLAAIAVAERVAAERRE--RIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRT 299
Query: 271 FM-NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKY 329
M D LS ++ +IVDE HER + L+L++ SA D + +Y
Sbjct: 300 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 359
Query: 330 FYDCGISHVVGRNFPV 345
F C + ++ GR F V
Sbjct: 360 FGSCPVIYIQGRPFEV 375
Score = 45 (20.9 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 395
+N P VR + +T + + V+DVV ++ EK L F+T +++ W
Sbjct: 675 KNPPAGVRKIILST-NIAETSITVNDVVFVIDSGKVKEKSFDALNFVTM-LKMVW 727
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 283 (104.7 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 81/267 (30%), Positives = 132/267 (49%)
Query: 411 HGQLSFDEQFCVFKSYPG-RRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H Q+ EQ VF++YPG R K+I +TN+ +TS+TIP + +VID+G+ K ++ +
Sbjct: 495 HSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDAS 554
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLG-IAVLRI 528
L + +SQ+ A QRAGRAGR G CYRLY L PEI R L I +L
Sbjct: 555 QLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTK 614
Query: 529 LALGIRDVQGFDFI--DAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
LA + ++ F + D P A+ + L LG + + E+T G + +L +
Sbjct: 615 LAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERD---EVTPLGHIVAELPLGV 671
Query: 587 RLGK-LILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRN-GDL 644
++GK L+ S + R L + +++ A + F +K +V F D
Sbjct: 672 QIGKCLVYSIYLRCL--DSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDS 729
Query: 645 FTLLSVYREWDSLPREERNKWCWENSV 671
++ +Y E+ +L R++ +C N +
Sbjct: 730 LAVIKLYEEFTNLKRKDIGDFCERNFI 756
Score = 248 (92.4 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 67/191 (35%), Positives = 101/191 (52%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIA--AEQSIVCTQPRKIA 222
LPIY R+ IL + +Q+L++ G TG GKSTQL Q++ + A IV +QPR+IA
Sbjct: 209 LPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPRRIA 268
Query: 223 AISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDH-CLLQHFMNDRD--LSR 279
AIS+++R+ +E RG + + Y + Q + V+ +T CLL+ D+
Sbjct: 269 AISVSERISKE-RG-EAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFKN 326
Query: 280 ISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVV 339
+ +I+DEAHER + LRLV+MSAT D LS YF + V
Sbjct: 327 TTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVE 386
Query: 340 GRNFPVDVRYV 350
GR+F V + ++
Sbjct: 387 GRSFEVSIYHL 397
Score = 53 (23.7 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 879 VLEYEKKWLHNECIEKCLYQGAGVSPSVALFGAGAEIKHLE-------LERRFL---TVD 928
VL E+ + I + L+ G G+S S+A+ E +L+ ER F+ ++
Sbjct: 703 VLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRKDIGDFCERNFICRNAME 762
Query: 929 VYHSNANILDDKELLMFLEKNASGSICS 956
++ S A+ L D +F AS + S
Sbjct: 763 MFVSAASTLRDTVYRIFRFSEASARLAS 790
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 467 (169.5 bits), Expect = 4.8e-41, P = 4.8e-41
Identities = 179/700 (25%), Positives = 316/700 (45%)
Query: 128 ESYDANVD-VFRFEDCQR--FDWSRIQAFIVRECKRLEDGLPIYMYRQDILRRIYGEQIL 184
+S D + + V ED + FD + + K E+ LPI+ + + + Q++
Sbjct: 30 DSSDGDEEGVLACEDLELNPFDGLPYSSRYYKLLKEREE-LPIWKEKYSFMESLLQNQVV 88
Query: 185 VLIGETGCGKSTQLVQFLADSGIAAEQS---IVCTQPRKIAAISLAQRVREESRGCYEDD 241
++ G++ CGKS+Q+ Q+ A+ ++ ++CTQ K A+ LA RV +E +
Sbjct: 89 LVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQVHKQTAVQLALRVADEMDVNIGHE 148
Query: 242 SVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISCIIVDEAHERSXXXXXXXXX 301
P F + ++ + Y TD L + M++ L II+D+ HERS
Sbjct: 149 VGYVIP-FENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGL 207
Query: 302 XXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVA 361
R +L+L+I + +LS Y+ + + V ++ PV+V Y+ + A
Sbjct: 208 LKDVLLARPELKLIINCSPFLISRLSSYYGNVPLLEVRNKH-PVEVVYL------SGAQK 260
Query: 362 SYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAVALPFHGQLS----FD 417
VVR++ E+H + ++G ++ FL + ++E E + P G+L +
Sbjct: 261 DPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLYP 320
Query: 418 EQFC-VFKSYP--------GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGM 468
++ C +F+ +R+V+ T+ E+ + V+FVID G+ + + P
Sbjct: 321 KEKCSLFRPVDETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRA 380
Query: 469 NVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSK--SDFETRPLNQEPEIHRVHLGIAVL 526
N L + +SQS A R G + G+ + LY++ + + RPL + E+ +L VL
Sbjct: 381 NSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPL-KPAEMQEANLTSMVL 439
Query: 527 RILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEP 586
+ + I + DF++ P+ +++ A+ +L L A+ N+G L+E G + + ++P
Sbjct: 440 FMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALD-NDG--NLSEFGIIMSEFPLDP 496
Query: 587 RLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFT 646
+L K IL+ E L +AA M A S F V E+ C K F H GD FT
Sbjct: 497 QLSKSILASCEFDCVDEMLTIAA-MVTAPSCFLHVPHGAEEAAVTCWKT-FLHPEGDHFT 554
Query: 647 LLSVYREWDSLPREERNKWC---W-ENSVNAKSLRRCQDTIK-ELETCLEK-ELAIIIPS 700
L+++Y + N+ C W N + S R D I+ EL +++ EL P+
Sbjct: 555 LINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIRAELLEIIKRIELPYAEPA 614
Query: 701 YWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHV-QLHPSCSLLIF 759
+ E +K+ +LS +A D G + +T + V QLHP S I
Sbjct: 615 FGS------QENGLNIKKALLSGYFMQIAR--DVDGSGNYLMLTHKQVAQLHPLSSYAIT 666
Query: 760 GQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLF 799
+ P WV+F + N Y+ +A + L P F
Sbjct: 667 KKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYYF 706
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 294 (108.6 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41
Identities = 87/271 (32%), Positives = 133/271 (49%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H + +Q V K+ P G RK+I +TN+AETS+T+ V FVIDSG VKE F+ +
Sbjct: 661 HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT 720
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRIL 529
+L++ +S++SA QR GRAGR PG C+RL+S+ F+ Q PE+ R+ L L
Sbjct: 721 MLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK 780
Query: 530 ALGIRDVQGFDFI-DAPSAKAIEMAIRNLVQ-LGAIKLNNGVFELTEEGKFLVKLGIEPR 587
L + DF+ AP + +RN VQ L I + +LTE G L L +EP
Sbjct: 781 LLAPVNCPIADFLMKAPEPPPA-LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPH 839
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
LGK++L + L +A +A + ++ C K D L
Sbjct: 840 LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMAL 899
Query: 648 LSVYREWDSLPRE--ERNKWCWENSVNAKSL 676
L ++ W + ER +C +N ++ ++
Sbjct: 900 LRAFQAWQKARSDGWER-AFCEKNFLSQATM 929
Score = 236 (88.1 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41
Identities = 62/195 (31%), Positives = 100/195 (51%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQS 212
E LP++ +++I++ I ++++++GETG GK+TQ+ QFL D +GI
Sbjct: 184 EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-- 241
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
I CTQPR++AAI++A+RV E R I Y S + + + T+ LL+
Sbjct: 242 IFCTQPRRLAAIAVAERVAAERRE--RIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL 299
Query: 272 M-NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
M D LS ++ +IVDE HER + L+L++ SA D + +YF
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Query: 331 YDCGISHVVGRNFPV 345
C + ++ GR F V
Sbjct: 360 GSCPVIYIQGRPFEV 374
Score = 45 (20.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 341 RNFPVDVRYVPCATAGTSAVASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEW 395
+N P VR + +T + + V+DVV ++ EK L F+T +++ W
Sbjct: 674 KNPPAGVRKIILST-NIAETSITVNDVVFVIDSGKVKEKSFDALNFVTM-LKMVW 726
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 296 (109.3 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 102/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 627 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 686
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+TI + V+DSG+ KE ++ T ++ L VS++
Sbjct: 687 AIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 746
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 747 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 805
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 806 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 862
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 863 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 917
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 918 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 977
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 978 NEYSEEEELVKGVLMAGLYPNL 999
Score = 234 (87.4 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 406 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 465
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 466 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 525
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 526 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 585
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 586 FMYPVKEHYL 595
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 296 (109.3 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 102/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 714
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+TI + V+DSG+ KE ++ T ++ L VS++
Sbjct: 715 AIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 774
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 775 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 833
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 890
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 891 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 946 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1005
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNL 1027
Score = 234 (87.4 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 614 FMYPVKEHYL 623
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 295 (108.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 99/316 (31%), Positives = 150/316 (47%)
Query: 375 HTTEKEGTILAFLTSKMEVEWACEK--FD----APSA---VALPFHGQLSFDEQFCVFKS 425
H+ E G IL FL E+ ++ FD A +A H + +Q V K+
Sbjct: 617 HSCEA-GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKN 675
Query: 426 YP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQR 484
P G RK+I +TN+AETS+T+ V FVIDSG VKE F+ + +L++ +S++SA QR
Sbjct: 676 PPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 735
Query: 485 AGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGFDFI-D 543
GRAGR PG C+RL+S+ F+ Q PE+ R+ L L L + DF+
Sbjct: 736 KGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMK 795
Query: 544 APSAKAIEMAIRNLVQ-LGAIKLNNGVFELTEEGKFLVKLGIEPRLGKLILSCFRRRLGR 602
AP + +RN VQ L I + +LTE G L L +EP LGK++L +
Sbjct: 796 APEPPPA-LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLD 854
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVYREWDSLPRE-- 660
L +A +A + ++ C K D LL ++ W +
Sbjct: 855 PILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGW 914
Query: 661 ERNKWCWENSVNAKSL 676
ER +C +N ++ ++
Sbjct: 915 ER-AFCEKNFLSQATM 929
Score = 237 (88.5 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 71/243 (29%), Positives = 117/243 (48%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQS 212
E LP++ +++I++ I ++++++GETG GK+TQ+ QFL D +GI
Sbjct: 184 EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-- 241
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
I CTQPR++AAI++A+RV E R I Y S + + + T+ LL+
Sbjct: 242 IFCTQPRRLAAIAVAERVAAERRE--RIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL 299
Query: 272 M-NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
M D LS ++ +IVDE HER + L+L++ SA D + +YF
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Query: 331 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVS-DVVRMVGEVHTTEKEGTILAFLTS 389
C + ++ GR F V ++ T Y + ++++ E EK+ T L S
Sbjct: 360 GSCPVIYIQGRPFEVKEMFLEDILRTTG----YTNKEMLKYKKEKQREEKQQTTLTEWYS 415
Query: 390 KME 392
E
Sbjct: 416 AQE 418
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 297 (109.6 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 102/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 681 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 740
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+TI + V+DSG+ KE ++ T ++ L VS++
Sbjct: 741 AIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 800
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 801 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQA-KIHMPEKTAV 859
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 860 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 916
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 917 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSG 971
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 972 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1031
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1032 NEYSEEEELVKGVLMAGLYPNL 1053
Score = 233 (87.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 520 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 579
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S ++VDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 580 SHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 639
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 640 FMYPVKEHYL 649
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 296 (109.3 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 102/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 683 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 742
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+TI + V+DSG+ KE ++ T ++ L VS++
Sbjct: 743 AIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 802
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 803 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 861
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 862 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 918
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 919 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSG 973
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 974 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1033
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNL 1055
Score = 234 (87.4 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 521
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 642 FMYPVKEHYL 651
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 296 (109.3 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 103/382 (26%), Positives = 180/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 714
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS TI + V+DSG+ KE ++ T ++ L VS++
Sbjct: 715 AIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 774
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 775 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 833
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + EPRL K ++L+
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTEPRLAKAIVLA 890
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 891 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 946 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1005
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNL 1027
Score = 233 (87.1 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 614 FMYPVKEHYL 623
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 297 (109.6 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 102/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 681 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 740
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+TI + V+DSG+ KE ++ T ++ L VS++
Sbjct: 741 AIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 800
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 801 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQA-KIHMPEKTAV 859
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 860 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 916
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 917 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSG 971
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 972 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1031
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1032 NEYSEEEELVKGVLMAGLYPNL 1053
Score = 232 (86.7 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 520 ISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 579
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S ++VDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 580 SHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 639
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 640 FMYPVKEHYL 649
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 294 (108.6 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 87/271 (32%), Positives = 133/271 (49%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H + +Q V K+ P G RK+I +TN+AETS+T+ V FVIDSG VKE F+ +
Sbjct: 677 HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT 736
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRIL 529
+L++ +S++SA QR GRAGR PG C+RL+S+ F+ Q PE+ R+ L L
Sbjct: 737 MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK 796
Query: 530 ALGIRDVQGFDFI-DAPSAKAIEMAIRNLVQ-LGAIKLNNGVFELTEEGKFLVKLGIEPR 587
L + DF+ AP + +RN VQ L I + +LTE G L L +EP
Sbjct: 797 LLAPVNCTIADFLMKAPEPPPA-LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPH 855
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
LGK++L + L +A +A + ++ C K D L
Sbjct: 856 LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMAL 915
Query: 648 LSVYREWDSLPRE--ERNKWCWENSVNAKSL 676
L ++ W + ER +C +N ++ ++
Sbjct: 916 LRAFQAWQKARSDGWER-AFCEKNFLSQATM 945
Score = 237 (88.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 71/243 (29%), Positives = 117/243 (48%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQS 212
E LP++ +++I++ I ++++++GETG GK+TQ+ QFL D +GI
Sbjct: 200 EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-- 257
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
I CTQPR++AAI++A+RV E R I Y S + + + T+ LL+
Sbjct: 258 IFCTQPRRLAAIAVAERVAAERRE--RIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL 315
Query: 272 M-NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
M D LS ++ +IVDE HER + L+L++ SA D + +YF
Sbjct: 316 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 375
Query: 331 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVS-DVVRMVGEVHTTEKEGTILAFLTS 389
C + ++ GR F V ++ T Y + ++++ E EK+ T L S
Sbjct: 376 GSCPVIYIQGRPFEVKEMFLEDILRTTG----YTNKEMLKYKKEKQREEKQQTTLTEWYS 431
Query: 390 KME 392
E
Sbjct: 432 AQE 434
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 295 (108.9 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 101/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 714
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+T+ + V+DSG+ KE ++ T ++ L VS++
Sbjct: 715 AIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 774
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 775 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 833
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 890
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 891 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 946 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1005
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNL 1027
Score = 233 (87.1 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 493
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 614 FMYPVKEHYL 623
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 295 (108.9 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 101/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 686 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 745
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+T+ + V+DSG+ KE ++ T ++ L VS++
Sbjct: 746 AIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 805
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 806 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 864
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 865 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 921
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 922 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 976
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 977 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1036
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1037 NEYSEEEELVKGVLMAGLYPNL 1058
Score = 233 (87.1 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 642 FMYPVKEHYL 651
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 295 (108.9 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 101/382 (26%), Positives = 181/382 (47%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 683 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 742
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+T+ + V+DSG+ KE ++ T ++ L VS++
Sbjct: 743 AIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 802
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 803 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 861
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 862 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 918
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 919 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 973
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPS-YWLWNP-- 706
W+ + R R + EN + A SLR IK+ + + + PS L +
Sbjct: 974 WEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQC 1033
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNL 1055
Score = 233 (87.1 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 581
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 582 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 641
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 642 FMYPVKEHYL 651
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 292 (107.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 87/271 (32%), Positives = 133/271 (49%)
Query: 411 HGQLSFDEQFCVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMN 469
H + +Q V K+ P G RK+I +TN+AETS+T+ V FVIDSG VKE F+ +
Sbjct: 662 HSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVT 721
Query: 470 VLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRIL 529
+L++ +S++SA QR GRAGR PG C+RL+S+ F+ Q PE+ R+ L L
Sbjct: 722 MLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK 781
Query: 530 ALGIRDVQGFDFI-DAPSAKAIEMAIRNLVQ-LGAIKLNNGVFELTEEGKFLVKLGIEPR 587
L + DF+ AP + +RN VQ L I + +LTE G L L +EP
Sbjct: 782 LLAPVNCPIADFLMKAPEPPPA-LIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPH 840
Query: 588 LGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTL 647
LGK++L + L +A +A + ++ C K D L
Sbjct: 841 LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMAL 900
Query: 648 LSVYREWDSLPRE--ERNKWCWENSVNAKSL 676
L ++ W + ER +C +N ++ ++
Sbjct: 901 LRAFQAWQKARSDGWER-AFCEKNFLSQATM 930
Score = 237 (88.5 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 71/243 (29%), Positives = 117/243 (48%)
Query: 157 ECKRLEDGLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQS 212
E LP++ +++I++ I ++++++GETG GK+TQ+ QFL D +GI
Sbjct: 185 EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR-- 242
Query: 213 IVCTQPRKIAAISLAQRVREESRGCYEDDSVICYP-SFSSAQHFDSKVIYMTDHCLLQHF 271
I CTQPR++AAI++A+RV E R I Y S + + + T+ LL+
Sbjct: 243 IFCTQPRRLAAIAVAERVAAERRE--RIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL 300
Query: 272 M-NDRDLSRISCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYF 330
M D LS ++ +IVDE HER + L+L++ SA D + +YF
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Query: 331 YDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVS-DVVRMVGEVHTTEKEGTILAFLTS 389
C + ++ GR F V ++ T Y + ++++ E EK+ T L S
Sbjct: 361 GSCPVIYIQGRPFEVKEMFLEDILRTTG----YTNKEMLKYKKEKQQEEKQQTTLTEWYS 416
Query: 390 KME 392
E
Sbjct: 417 AQE 419
Score = 37 (18.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 338 VVGRNFPVDVRYVPC-ATAGTSAV----ASYVSDVVRMVGEVHTTEKEG 381
++ N VD R+ ATA A AS V ++ M VH+ G
Sbjct: 492 ILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNG 540
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 287 (106.1 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 99/384 (25%), Positives = 183/384 (47%)
Query: 364 VSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWA----CEKFDAPSA--VALPFHGQLSFD 417
++D+V + + H + G IL FL E++ E + ++ + LP H +
Sbjct: 698 ITDLVLQI-DAHG--EPGGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMM 754
Query: 418 EQFCVF-KSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRV 476
+Q +F + PG RK++ ATN+AETS+TI + V+DSG KE ++ T ++ L V
Sbjct: 755 DQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWV 814
Query: 477 SQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDV 536
S+S+ QR GRAGR + G Y L+ +S + P Q PEI R L V++ + + +
Sbjct: 815 SKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQA-KIHMPEK 873
Query: 537 QGFDFI----DAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-L 591
+F+ D+P KA++ A+ L ++G + LT GK L ++ +PRL K +
Sbjct: 874 TAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREA---LTTLGKRLAQISTDPRLAKAI 930
Query: 592 ILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNGDLFTLLSVY 651
+L+ R L ++++ + + S + ++ +K KA V D +
Sbjct: 931 VLASIYRCLHPLLVIVSCLTRDPFSSSLQNRAEVDKAKA----VLSRESGSDHLAFVRAV 986
Query: 652 REWDSLPREE----RNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNP- 706
W+ + R R+ + + + SLR +K+ L + + PS
Sbjct: 987 AGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSS 1046
Query: 707 --HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1047 VCNQYSEEEELVKGVLMAGLYPNL 1070
Score = 240 (89.5 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 63/190 (33%), Positives = 94/190 (49%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ ++ IL I ++V+ G+TGCGK+T++ Q L + G A ++V TQPR+
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+AIS+AQRV +E + S +++ T LL+ + L +
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S ++VDE HER DLRLV+MSAT D + S YF DC + V G
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVPG 657
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 658 FMYPVKEYYL 667
Score = 38 (18.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 1020 VKAKVYWPRRLSKGFAVVKCDATDVE 1045
V+AK++ P + + F D+ D++
Sbjct: 864 VQAKIHMPEKTAVEFLSKALDSPDIK 889
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 322 (118.4 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 121/437 (27%), Positives = 204/437 (46%)
Query: 376 TTEKE-GTILAFLTSKMEVEW---ACEKFDAPSAVALPFHGQLSFDEQFCVFK-SYPGRR 430
TT E G++L FL E+++ A K P H ++ +EQ VF PG R
Sbjct: 341 TTHPERGSVLVFLPGLAEIQYMKEALSKLVRKRLQVYPLHSTVTLEEQNGVFLVPVPGYR 400
Query: 431 KVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQSSANQRAGRAGR 490
K+I +TN+AE+S+T+P VK+VID +V++ + T LR+ S++S NQR GRAGR
Sbjct: 401 KIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGR 460
Query: 491 TEPGRCYRLYSKSDFETR-PLNQEPEIHRVHLGIAVLRILALGIRDVQGF--DFIDAPSA 547
G CYRL ++ +E P PE+ R L +L++ L + D + + P
Sbjct: 461 VSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPIL 520
Query: 548 KAIEMAIRNLVQLGAIKLNNGV---FE--LTEEGKFLVKLGIEPRLGKLILSCFRRRLGR 602
IE + L Q+GA+ + + F+ LT G+ L +L ++ +LGKLI+
Sbjct: 521 GDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLE 580
Query: 603 EGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHR-NGDLFTLLSVYREWDSL---- 657
E L++AA ++ S F +++ K+ F D ++ ++ W +
Sbjct: 581 ECLIIAASLS-LKSFFAMPSL--QQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKG 637
Query: 658 ----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNPHKYTEYD 713
P++E +W EN + K +R + ++L+ + + I S NP YT
Sbjct: 638 ELRHPKDEL-EWGKENCIQIKRIREVAELFEDLKKRVSRFNMHISSSS---NPTDYTSLH 693
Query: 714 KWLKEIILSALAENVAMFSGYDQLG-YEVAMTGQHVQLH-PSCSLLIFGQKP-TWVVFGE 770
K + IL + A+F Y G + + + + + P ++LI P ++ + +
Sbjct: 694 K--QRFILQVVIAG-ALFPNYFSQGEIDEQLASKELSGNDPKTTILIRNLPPFAFLCYKQ 750
Query: 771 LLSVNNQY-LVCVTAFD 786
L S+ Q V AFD
Sbjct: 751 LQSLFRQCGQVKSIAFD 767
Score = 204 (76.9 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 58/172 (33%), Positives = 89/172 (51%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVC----TQPRK 220
LPI RQ+++ I ++++ G TG GK+TQL QF+ D AE++I C TQPRK
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDH--YAERNIPCNLVVTQPRK 146
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I A S+A+ V E R C V +K+IY+T LLQ ++ + L+
Sbjct: 147 IGATSIARWVARE-RKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEY 205
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXX--XCRRFDLRLVIMSATADAHQLSKYF 330
S I +DE HERS R+ +++++MSAT + + ++YF
Sbjct: 206 SHIFIDEVHERSEELDFLLLVVRKLLRSNSRY-VKVILMSATINCIEFAEYF 256
Score = 40 (19.1 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 314 LVIMSATADAH--QLSKYFYDCGISHVVGRNFPVDVRYVPCATAGTSAVASYVS 365
++I AT QL ++ D H RN P ++ G +++A +V+
Sbjct: 108 VIIRGATGSGKTTQLPQFILD----HYAERNIPCNLVVTQPRKIGATSIARWVA 157
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 293 (108.2 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 100/382 (26%), Positives = 179/382 (46%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 714
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+T+ + V+DSG+ KE ++ T ++ L VS++
Sbjct: 715 AIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 774
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 775 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 833
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 890
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 891 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNP--- 706
W+ + R R + EN + A SLR IK+ + + + PS
Sbjct: 946 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1005
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNL 1027
Score = 232 (86.7 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 614 FMYPVKEHYL 623
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 293 (108.2 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 100/382 (26%), Positives = 179/382 (46%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 655 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 714
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+T+ + V+DSG+ KE ++ T ++ L VS++
Sbjct: 715 AIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 774
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 775 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 833
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 834 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 890
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 891 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 945
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNP--- 706
W+ + R R + EN + A SLR IK+ + + + PS
Sbjct: 946 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1005
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1006 NEYSEEEELVKGVLMAGLYPNL 1027
Score = 232 (86.7 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 614 FMYPVKEHYL 623
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 293 (108.2 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 100/382 (26%), Positives = 179/382 (46%)
Query: 367 VVRMVGEVHTTEKEGTILAFLTSKMEVEWACEKFDAPSAV------ALPFHGQLSFDEQF 420
V +V + + G IL FL E++ ++ + LP H + +Q
Sbjct: 678 VTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQK 737
Query: 421 CVFKSYP-GRRKVIFATNVAETSLTIPGVKFVIDSGMVKESYFEPGTGMNVLRVCRVSQS 479
+F+ P G RK++ ATN+AETS+T+ + V+DSG+ KE ++ T ++ L VS++
Sbjct: 738 AIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRA 797
Query: 480 SANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRVHLGIAVLRILALGIRDVQGF 539
+ QR GRAGR + G Y L+ +S E Q PEI R L VL+ + + +
Sbjct: 798 NVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQA-KIHMPEKTAV 856
Query: 540 DF----IDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFLVKLGIEPRLGK-LILS 594
+F +D+P+ KA++ A+ L ++G + LT G+ L + +PRL K ++L+
Sbjct: 857 EFLSKAVDSPNIKAVDEAVILLQEIGVLDQRE---YLTTLGQRLAHISTDPRLAKAIVLA 913
Query: 595 CFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCHRNG-DLFTLLSVYRE 653
R L +V++ + + S S + + D +K H +G D +
Sbjct: 914 AIFRCLHPLLVVVSCLTRDPFS-----SSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAG 968
Query: 654 WDSL----PREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIPSYWLWNP--- 706
W+ + R R + EN + A SLR IK+ + + + PS
Sbjct: 969 WEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQC 1028
Query: 707 HKYTEYDKWLKEIILSALAENV 728
++Y+E ++ +K ++++ L N+
Sbjct: 1029 NEYSEEEELVKGVLMAGLYPNL 1050
Score = 232 (86.7 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 165 LPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLAD----SGIAAEQSIVCTQPRK 220
LP+ +R IL I ++V+ G+TGCGK+T++ Q L + G A +++ TQPR+
Sbjct: 457 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 516
Query: 221 IAAISLAQRVREESRGCYEDDSVICYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRI 280
I+A+S+AQRV E + S +++ T LL+ ++ L +
Sbjct: 517 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV 576
Query: 281 SCIIVDEAHERSXXXXXXXXXXXXXXCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVG 340
S +IVDE HER LRLV+MSAT D + S+YF C + V G
Sbjct: 577 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 636
Query: 341 RNFPVDVRYV 350
+PV Y+
Sbjct: 637 FMYPVKEHYL 646
WARNING: HSPs involving 60 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1252 1204 0.00097 123 3 11 22 0.49 33
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 310
No. of states in DFA: 628 (67 KB)
Total size of DFA: 563 KB (2254 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 107.78u 0.10s 107.88t Elapsed: 00:00:09
Total cpu time: 107.89u 0.11s 108.00t Elapsed: 00:00:09
Start: Tue May 21 16:02:58 2013 End: Tue May 21 16:03:07 2013
WARNINGS ISSUED: 2