Query 000856
Match_columns 1252
No_of_seqs 514 out of 4400
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:31:24 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000856.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000856hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 4E-205 8E-210 1864.2 129.8 1216 23-1250 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 6E-168 1E-172 1660.4 152.9 1213 22-1248 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 1E-166 3E-171 1563.4 127.1 1102 109-1248 263-1375(1381)
4 PLN03130 ABC transporter C fam 100.0 1E-154 2E-159 1548.1 150.0 1097 109-1249 366-1475(1622)
5 PLN03232 ABC transporter C fam 100.0 2E-153 5E-158 1538.7 147.0 1093 109-1250 366-1473(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 5E-150 1E-154 1508.4 149.7 1160 49-1248 330-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 6E-144 1E-148 1443.4 147.3 1126 94-1250 295-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 6E-142 1E-146 1424.8 146.8 1161 49-1250 93-1454(1490)
9 KOG0058 Peptide exporter, ABC 100.0 5E-105 1E-109 929.8 66.7 574 671-1250 133-706 (716)
10 KOG0058 Peptide exporter, ABC 100.0 2E-101 3E-106 900.4 66.9 573 24-604 133-706 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 2.8E-98 6E-103 920.5 72.1 579 22-603 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 9E-93 2E-97 867.6 70.8 567 674-1249 143-709 (709)
13 COG2274 SunT ABC-type bacterio 100.0 6.3E-87 1.4E-91 816.2 72.0 568 23-602 139-708 (709)
14 COG1132 MdlB ABC-type multidru 100.0 1.3E-84 2.8E-89 808.5 73.5 554 683-1250 13-566 (567)
15 PRK11174 cysteine/glutathione 100.0 3.4E-84 7.4E-89 809.7 75.0 570 673-1252 10-588 (588)
16 COG4988 CydD ABC-type transpor 100.0 2.6E-83 5.5E-88 735.8 69.5 553 689-1250 4-557 (559)
17 TIGR00958 3a01208 Conjugate Tr 100.0 3.4E-83 7.5E-88 810.5 73.3 564 672-1245 148-711 (711)
18 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.5E-82 3.2E-87 806.6 75.7 562 673-1248 123-685 (686)
19 PRK11174 cysteine/glutathione 100.0 2.2E-82 4.7E-87 793.5 74.5 568 25-603 9-585 (588)
20 TIGR01193 bacteriocin_ABC ABC- 100.0 7.1E-82 1.5E-86 803.1 73.0 563 673-1246 144-707 (708)
21 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1E-81 2.3E-86 802.7 73.0 563 673-1245 142-709 (710)
22 COG4988 CydD ABC-type transpor 100.0 5.6E-81 1.2E-85 716.5 70.1 552 44-604 5-557 (559)
23 PRK11160 cysteine/glutathione 100.0 5.9E-81 1.3E-85 773.4 75.0 566 674-1247 5-573 (574)
24 PTZ00265 multidrug resistance 100.0 2.1E-81 4.6E-86 833.3 75.4 569 26-602 813-1465(1466)
25 TIGR00958 3a01208 Conjugate Tr 100.0 1.4E-80 3E-85 786.7 74.5 565 23-598 146-710 (711)
26 PRK11176 lipid transporter ATP 100.0 1.9E-80 4.1E-85 775.7 74.2 567 674-1250 14-581 (582)
27 TIGR03375 type_I_sec_LssB type 100.0 1.5E-80 3.2E-85 789.3 73.5 552 676-1236 138-689 (694)
28 PRK10790 putative multidrug tr 100.0 6.7E-80 1.5E-84 770.9 74.5 567 672-1250 10-577 (592)
29 COG1132 MdlB ABC-type multidru 100.0 1.7E-79 3.8E-84 762.5 75.1 562 26-603 4-565 (567)
30 KOG0056 Heavy metal exporter H 100.0 6.8E-83 1.5E-87 697.0 37.3 502 743-1250 274-776 (790)
31 TIGR01846 type_I_sec_HlyB type 100.0 1.8E-79 3.9E-84 778.5 74.3 566 674-1249 128-693 (694)
32 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.6E-79 9.9E-84 774.6 76.3 564 24-602 121-685 (686)
33 KOG0057 Mitochondrial Fe/S clu 100.0 4.4E-80 9.5E-85 694.8 58.7 544 698-1250 43-588 (591)
34 COG4987 CydC ABC-type transpor 100.0 1.4E-79 2.9E-84 690.8 62.3 504 736-1247 66-572 (573)
35 TIGR01193 bacteriocin_ABC ABC- 100.0 6.6E-79 1.4E-83 775.9 75.2 565 24-600 142-707 (708)
36 PRK11160 cysteine/glutathione 100.0 2.2E-78 4.7E-83 750.5 74.5 567 26-600 4-572 (574)
37 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.6E-78 3.4E-83 773.5 74.7 563 24-599 140-709 (710)
38 TIGR02203 MsbA_lipidA lipid A 100.0 5.6E-78 1.2E-82 752.9 73.7 564 676-1249 5-569 (571)
39 TIGR03375 type_I_sec_LssB type 100.0 6.5E-78 1.4E-82 765.1 74.3 557 24-591 133-689 (694)
40 PRK13657 cyclic beta-1,2-gluca 100.0 1.1E-77 2.3E-82 749.6 74.8 565 673-1249 7-571 (588)
41 PRK11176 lipid transporter ATP 100.0 5.3E-77 1.2E-81 744.6 75.8 566 26-602 13-579 (582)
42 TIGR01192 chvA glucan exporter 100.0 6.7E-77 1.4E-81 737.9 75.1 565 673-1249 7-571 (585)
43 TIGR02204 MsbA_rel ABC transpo 100.0 4.7E-77 1E-81 744.8 74.3 567 676-1248 9-575 (576)
44 TIGR02868 CydC thiol reductant 100.0 2.4E-77 5.3E-82 738.5 69.6 521 677-1207 5-529 (529)
45 TIGR01846 type_I_sec_HlyB type 100.0 9.5E-77 2.1E-81 753.6 76.6 568 24-602 125-692 (694)
46 PRK10789 putative multidrug tr 100.0 1E-76 2.3E-81 735.5 71.7 543 699-1250 9-552 (569)
47 PRK10790 putative multidrug tr 100.0 3.9E-76 8.4E-81 737.0 76.2 566 26-604 11-577 (592)
48 TIGR02203 MsbA_lipidA lipid A 100.0 1.6E-75 3.4E-80 730.9 75.5 565 27-602 3-568 (571)
49 TIGR01192 chvA glucan exporter 100.0 2.6E-75 5.6E-80 723.7 76.6 564 26-602 7-570 (585)
50 PRK13657 cyclic beta-1,2-gluca 100.0 4.4E-75 9.4E-80 726.2 76.1 565 26-603 7-571 (588)
51 COG1123 ATPase components of v 100.0 8.5E-78 1.8E-82 694.9 47.0 480 364-1246 5-530 (539)
52 COG4987 CydC ABC-type transpor 100.0 2.7E-75 6E-80 656.0 65.1 503 92-600 66-571 (573)
53 PRK10789 putative multidrug tr 100.0 3.8E-75 8.2E-80 721.6 72.7 542 51-604 10-552 (569)
54 COG5265 ATM1 ABC-type transpor 100.0 4.8E-78 1E-82 655.9 40.4 491 750-1246 4-496 (497)
55 TIGR02868 CydC thiol reductant 100.0 1.8E-75 3.9E-80 721.9 68.9 525 28-562 3-529 (529)
56 TIGR02204 MsbA_rel ABC transpo 100.0 1.1E-74 2.4E-79 723.5 75.7 570 26-602 6-575 (576)
57 TIGR02857 CydD thiol reductant 100.0 1.7E-74 3.6E-79 713.2 70.9 526 686-1219 4-529 (529)
58 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-74 3.7E-79 649.6 59.5 548 48-603 39-587 (591)
59 TIGR01842 type_I_sec_PrtD type 100.0 3.3E-73 7.2E-78 702.0 72.0 537 684-1236 5-543 (544)
60 KOG0056 Heavy metal exporter H 100.0 3.9E-76 8.5E-81 644.0 39.4 504 98-606 273-778 (790)
61 TIGR02857 CydD thiol reductant 100.0 3.4E-73 7.5E-78 701.5 70.1 525 41-574 5-529 (529)
62 TIGR00957 MRP_assoc_pro multi 100.0 1E-72 2.2E-77 759.9 74.9 508 88-601 1009-1519(1522)
63 TIGR01842 type_I_sec_PrtD type 100.0 9.4E-72 2E-76 689.1 72.4 529 45-590 12-542 (544)
64 PRK10261 glutathione transport 100.0 2.1E-74 4.5E-79 717.9 47.4 500 364-1246 12-565 (623)
65 PRK13549 xylose transporter AT 100.0 1.5E-74 3.2E-79 707.0 44.0 459 364-1234 5-493 (506)
66 PLN03130 ABC transporter C fam 100.0 2.4E-71 5.1E-76 744.3 74.6 507 86-602 955-1474(1622)
67 PRK15134 microcin C ABC transp 100.0 6.9E-74 1.5E-78 704.9 45.1 469 364-1241 5-521 (529)
68 PRK09700 D-allose transporter 100.0 3.5E-73 7.5E-78 696.3 46.0 456 364-1232 5-495 (510)
69 PTZ00243 ABC transporter; Prov 100.0 2.6E-70 5.7E-75 733.7 75.2 509 91-602 1005-1546(1560)
70 PRK10762 D-ribose transporter 100.0 5.1E-73 1.1E-77 692.6 43.3 451 364-1234 4-483 (501)
71 PLN03232 ABC transporter C fam 100.0 2E-70 4.3E-75 736.9 72.5 510 86-602 952-1471(1495)
72 TIGR03269 met_CoM_red_A2 methy 100.0 7E-73 1.5E-77 695.3 43.1 457 365-1235 1-517 (520)
73 COG4172 ABC-type uncharacteriz 100.0 5E-72 1.1E-76 603.3 41.9 470 364-1243 6-524 (534)
74 PRK11288 araG L-arabinose tran 100.0 1.6E-72 3.4E-77 688.3 43.1 453 364-1234 4-484 (501)
75 TIGR02633 xylG D-xylose ABC tr 100.0 3.1E-72 6.8E-77 686.9 44.3 457 365-1233 2-490 (500)
76 PRK15439 autoinducer 2 ABC tra 100.0 1E-71 2.2E-76 681.2 47.4 462 364-1235 11-492 (510)
77 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.6E-69 3.4E-74 668.7 66.4 534 672-1227 4-551 (555)
78 TIGR01257 rim_protein retinal- 100.0 6.8E-69 1.5E-73 707.0 73.3 221 363-592 927-1151(2272)
79 PRK10982 galactose/methyl gala 100.0 3.1E-71 6.8E-76 675.9 44.9 450 367-1233 1-478 (491)
80 COG4618 ArpD ABC-type protease 100.0 1E-69 2.2E-74 604.1 52.6 532 691-1236 29-561 (580)
81 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.9E-68 6.3E-73 657.4 67.8 535 24-582 3-551 (555)
82 PRK10938 putative molybdenum t 100.0 1.9E-70 4.1E-75 669.5 45.1 452 364-1228 3-485 (490)
83 COG5265 ATM1 ABC-type transpor 100.0 1.8E-69 3.8E-74 589.0 42.6 490 107-600 5-496 (497)
84 PRK15064 ABC transporter ATP-b 100.0 1.1E-68 2.3E-73 659.0 52.2 480 365-1236 2-526 (530)
85 TIGR01271 CFTR_protein cystic 100.0 9.1E-67 2E-71 699.9 73.5 502 93-603 934-1453(1490)
86 TIGR00956 3a01205 Pleiotropic 100.0 1.3E-67 2.9E-72 701.6 60.3 213 1009-1232 759-990 (1394)
87 KOG0054 Multidrug resistance-a 100.0 9.7E-67 2.1E-71 658.8 62.0 572 20-599 797-1372(1381)
88 PRK11819 putative ABC transpor 100.0 3.6E-67 7.9E-72 647.0 53.2 484 364-1236 6-534 (556)
89 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.6E-66 3.5E-71 641.5 54.3 482 364-1235 4-531 (552)
90 COG4618 ArpD ABC-type protease 100.0 2.2E-65 4.7E-70 569.6 53.9 535 38-591 23-561 (580)
91 PRK10522 multidrug transporter 100.0 2.3E-64 5E-69 623.0 65.5 473 742-1236 62-540 (547)
92 PRK10636 putative ABC transpor 100.0 2.2E-65 4.8E-70 636.8 52.1 199 1009-1234 312-516 (638)
93 PRK10522 multidrug transporter 100.0 3.2E-63 6.9E-68 612.9 67.4 468 97-585 61-534 (547)
94 COG1129 MglA ABC-type sugar tr 100.0 2.3E-65 5E-70 588.2 41.2 462 364-1232 8-487 (500)
95 PLN03140 ABC transporter G fam 100.0 9.4E-64 2E-68 660.6 58.6 213 1009-1231 867-1106(1470)
96 PRK11147 ABC transporter ATPas 100.0 8.8E-64 1.9E-68 624.8 51.8 200 1009-1234 319-527 (635)
97 PLN03073 ABC transporter F fam 100.0 6.5E-64 1.4E-68 623.2 49.1 200 1008-1233 507-712 (718)
98 TIGR00954 3a01203 Peroxysomal 100.0 3.9E-61 8.4E-66 600.9 62.4 530 26-576 79-653 (659)
99 PRK13409 putative ATPase RIL; 100.0 2.6E-63 5.6E-68 608.1 39.9 192 1009-1229 340-536 (590)
100 COG3845 ABC-type uncharacteriz 100.0 1.4E-62 3E-67 550.4 40.8 465 364-1232 4-489 (501)
101 TIGR00954 3a01203 Peroxysomal 100.0 1.5E-60 3.2E-65 595.7 63.3 530 672-1221 78-653 (659)
102 COG0488 Uup ATPase components 100.0 4.1E-62 8.8E-67 579.4 46.4 485 364-1236 3-526 (530)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 9.3E-53 2E-57 468.3 27.4 237 1008-1248 1-237 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 6E-52 1.3E-56 417.4 19.9 219 364-592 2-227 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 2.7E-50 5.8E-55 405.4 22.6 218 1009-1240 2-230 (240)
106 KOG0927 Predicted transporter 100.0 1.6E-48 3.6E-53 437.3 30.4 194 1009-1227 389-587 (614)
107 COG1135 AbcC ABC-type metal io 100.0 2E-49 4.3E-54 419.6 21.7 220 1010-1240 2-236 (339)
108 COG1135 AbcC ABC-type metal io 100.0 1.7E-49 3.7E-54 420.2 20.0 223 365-592 2-233 (339)
109 COG1125 OpuBA ABC-type proline 100.0 6.5E-49 1.4E-53 402.3 19.1 218 365-592 2-227 (309)
110 PRK14257 phosphate ABC transpo 100.0 3.2E-48 7E-53 443.2 25.5 228 1004-1239 75-317 (329)
111 COG1117 PstB ABC-type phosphat 100.0 7.6E-49 1.6E-53 392.2 17.5 220 1009-1238 7-240 (253)
112 COG1125 OpuBA ABC-type proline 100.0 1.2E-47 2.5E-52 393.1 19.4 221 1010-1244 2-234 (309)
113 COG1117 PstB ABC-type phosphat 100.0 8.6E-48 1.9E-52 384.6 17.8 219 363-591 6-238 (253)
114 cd03289 ABCC_CFTR2 The CFTR su 100.0 2E-46 4.3E-51 417.6 27.0 235 364-601 2-236 (275)
115 cd03252 ABCC_Hemolysin The ABC 100.0 4.4E-46 9.5E-51 411.4 27.5 235 1010-1246 1-235 (237)
116 cd03288 ABCC_SUR2 The SUR doma 100.0 7E-46 1.5E-50 413.6 28.5 241 1006-1248 16-256 (257)
117 COG4615 PvdE ABC-type sideroph 100.0 8.7E-43 1.9E-47 375.3 48.4 470 91-582 55-529 (546)
118 KOG0062 ATPase component of AB 100.0 3.9E-45 8.5E-50 408.0 30.6 195 1008-1226 361-559 (582)
119 KOG0065 Pleiotropic drug resis 100.0 1.3E-44 2.7E-49 445.2 37.4 198 1024-1231 803-1017(1391)
120 COG1127 Ttg2A ABC-type transpo 100.0 4.7E-46 1E-50 380.8 20.8 223 363-595 7-240 (263)
121 COG1120 FepC ABC-type cobalami 100.0 6.2E-46 1.4E-50 396.8 19.1 214 364-591 2-229 (258)
122 cd03251 ABCC_MsbA MsbA is an e 100.0 1E-44 2.3E-49 399.8 26.4 233 1010-1244 1-233 (234)
123 COG1120 FepC ABC-type cobalami 100.0 5E-45 1.1E-49 389.8 22.2 214 1009-1236 2-229 (258)
124 cd03253 ABCC_ATM1_transporter 100.0 1.7E-44 3.7E-49 398.7 27.2 235 1010-1247 1-235 (236)
125 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.6E-44 3.5E-49 399.2 26.7 236 1010-1246 1-236 (238)
126 cd03252 ABCC_Hemolysin The ABC 100.0 1.7E-44 3.7E-49 398.7 26.9 234 365-599 1-234 (237)
127 COG3839 MalK ABC-type sugar tr 100.0 3E-45 6.4E-50 406.7 20.6 213 364-592 3-225 (338)
128 COG3840 ThiQ ABC-type thiamine 100.0 4E-45 8.7E-50 355.2 18.8 210 365-592 2-221 (231)
129 cd03244 ABCC_MRP_domain2 Domai 100.0 1.9E-44 4.1E-49 394.2 26.4 221 1008-1230 1-221 (221)
130 COG3638 ABC-type phosphate/pho 100.0 2.8E-45 6.2E-50 374.1 18.5 217 364-590 3-237 (258)
131 TIGR02314 ABC_MetN D-methionin 100.0 9.8E-45 2.1E-49 414.6 25.0 225 1010-1245 2-241 (343)
132 COG1136 SalX ABC-type antimicr 100.0 7E-45 1.5E-49 381.0 21.2 209 365-580 2-221 (226)
133 COG1116 TauB ABC-type nitrate/ 100.0 5.9E-45 1.3E-49 380.2 20.6 202 364-580 3-212 (248)
134 COG2884 FtsE Predicted ATPase 100.0 3.8E-45 8.1E-50 359.1 17.2 206 365-583 2-219 (223)
135 COG2884 FtsE Predicted ATPase 100.0 4.7E-45 1E-49 358.4 17.8 208 1010-1230 2-221 (223)
136 COG1124 DppF ABC-type dipeptid 100.0 1.2E-44 2.6E-49 373.3 21.5 226 1009-1245 3-241 (252)
137 cd03254 ABCC_Glucan_exporter_l 100.0 2.9E-44 6.3E-49 394.9 26.1 227 1008-1236 1-227 (229)
138 PRK14257 phosphate ABC transpo 100.0 1.8E-44 3.9E-49 412.4 25.1 223 361-591 77-314 (329)
139 COG1127 Ttg2A ABC-type transpo 100.0 2.2E-44 4.8E-49 368.6 22.8 224 1009-1246 8-246 (263)
140 COG3842 PotA ABC-type spermidi 100.0 4.6E-45 1E-49 407.4 18.6 214 363-592 4-228 (352)
141 COG3839 MalK ABC-type sugar tr 100.0 2.8E-44 6E-49 399.0 23.0 219 1009-1243 3-231 (338)
142 COG1122 CbiO ABC-type cobalt t 100.0 2.6E-44 5.6E-49 386.0 21.1 215 364-591 3-229 (235)
143 COG1122 CbiO ABC-type cobalt t 100.0 4.3E-44 9.4E-49 384.3 22.7 215 1009-1236 3-229 (235)
144 COG4178 ABC-type uncharacteriz 100.0 1.6E-40 3.5E-45 390.0 53.9 473 730-1221 88-588 (604)
145 cd03245 ABCC_bacteriocin_expor 100.0 1.6E-43 3.6E-48 386.4 26.3 220 1008-1228 1-220 (220)
146 COG4615 PvdE ABC-type sideroph 100.0 8.4E-41 1.8E-45 360.0 45.3 473 733-1228 53-530 (546)
147 cd03254 ABCC_Glucan_exporter_l 100.0 3.1E-43 6.6E-48 386.8 26.8 226 364-591 2-227 (229)
148 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.9E-43 6.2E-48 389.2 26.6 231 365-595 1-231 (238)
149 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-43 2.9E-48 344.6 20.5 211 1010-1238 2-222 (231)
150 cd03251 ABCC_MsbA MsbA is an e 100.0 3.2E-43 6.9E-48 388.0 26.4 231 365-596 1-231 (234)
151 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.2E-43 4.7E-48 374.8 23.6 210 1009-1236 4-228 (254)
152 cd03253 ABCC_ATM1_transporter 100.0 4.1E-43 9E-48 387.6 26.6 232 365-598 1-232 (236)
153 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-43 3.8E-48 390.0 23.4 218 1010-1242 1-232 (235)
154 PRK13631 cbiO cobalt transport 100.0 4.6E-43 1E-47 399.7 27.5 222 1008-1236 20-266 (320)
155 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-43 3.2E-48 376.1 21.8 210 364-591 4-228 (254)
156 COG3638 ABC-type phosphate/pho 100.0 1.1E-43 2.5E-48 362.3 20.0 213 1009-1234 3-236 (258)
157 COG1118 CysA ABC-type sulfate/ 100.0 4.5E-44 9.8E-49 377.7 17.6 213 364-592 2-229 (345)
158 COG1136 SalX ABC-type antimicr 100.0 3.5E-43 7.6E-48 368.2 24.1 206 1010-1226 2-222 (226)
159 COG1124 DppF ABC-type dipeptid 100.0 1.8E-43 3.8E-48 364.6 21.0 222 364-596 3-238 (252)
160 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-43 3.4E-48 404.6 22.6 220 365-591 2-231 (343)
161 cd03248 ABCC_TAP TAP, the Tran 100.0 5.2E-43 1.1E-47 383.9 24.6 219 1006-1224 8-226 (226)
162 cd03260 ABC_PstB_phosphate_tra 100.0 3.3E-43 7.1E-48 385.8 22.7 212 1010-1233 1-227 (227)
163 cd03288 ABCC_SUR2 The SUR doma 100.0 1.4E-42 3E-47 387.1 27.9 237 361-599 16-253 (257)
164 COG3842 PotA ABC-type spermidi 100.0 1.8E-43 3.9E-48 394.6 20.0 222 1008-1245 4-236 (352)
165 PRK13650 cbiO cobalt transport 100.0 6.5E-43 1.4E-47 393.7 24.8 217 1009-1236 4-230 (279)
166 PRK14269 phosphate ABC transpo 100.0 1E-42 2.2E-47 386.2 25.2 220 1009-1238 2-233 (246)
167 PRK14250 phosphate ABC transpo 100.0 1.5E-42 3.2E-47 383.4 26.1 223 1009-1245 3-231 (241)
168 cd03244 ABCC_MRP_domain2 Domai 100.0 2E-42 4.3E-47 378.2 26.0 219 364-584 2-220 (221)
169 PRK11153 metN DL-methionine tr 100.0 1.2E-42 2.5E-47 401.4 25.0 222 1010-1242 2-237 (343)
170 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.2E-42 4.7E-47 373.4 25.5 206 1005-1230 2-207 (207)
171 PRK11650 ugpC glycerol-3-phosp 100.0 1.8E-42 3.8E-47 399.8 26.2 219 1009-1242 3-231 (356)
172 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-42 2.6E-47 362.9 22.3 197 1009-1224 3-211 (248)
173 PRK11432 fbpC ferric transport 100.0 1.7E-42 3.7E-47 398.6 25.5 219 1009-1243 6-234 (351)
174 cd03245 ABCC_bacteriocin_expor 100.0 3.8E-42 8.2E-47 375.7 26.2 219 364-583 2-220 (220)
175 PRK13631 cbiO cobalt transport 100.0 2E-42 4.4E-47 394.4 24.7 222 363-591 20-266 (320)
176 TIGR03265 PhnT2 putative 2-ami 100.0 2.1E-42 4.7E-47 398.6 25.0 218 1009-1242 4-231 (353)
177 PRK13637 cbiO cobalt transport 100.0 2.6E-42 5.7E-47 390.0 24.6 216 1010-1236 3-235 (287)
178 COG4178 ABC-type uncharacteriz 100.0 8E-39 1.7E-43 375.7 54.3 470 82-575 84-587 (604)
179 PRK14273 phosphate ABC transpo 100.0 4.3E-42 9.2E-47 383.3 25.1 224 1009-1242 7-245 (254)
180 TIGR01186 proV glycine betaine 100.0 2.4E-42 5.1E-47 396.8 23.5 208 1025-1243 6-227 (363)
181 TIGR00972 3a0107s01c2 phosphat 100.0 5.7E-42 1.2E-46 380.7 25.3 222 1010-1241 2-238 (247)
182 PRK13647 cbiO cobalt transport 100.0 4.4E-42 9.6E-47 385.9 24.7 213 1009-1234 4-226 (274)
183 PRK13635 cbiO cobalt transport 100.0 4.5E-42 9.8E-47 386.4 24.4 216 1009-1236 5-230 (279)
184 cd03296 ABC_CysA_sulfate_impor 100.0 6.5E-42 1.4E-46 378.2 25.1 213 1010-1238 3-229 (239)
185 PRK14242 phosphate transporter 100.0 5.4E-42 1.2E-46 382.5 24.6 220 1009-1238 6-240 (253)
186 cd03248 ABCC_TAP TAP, the Tran 100.0 6E-42 1.3E-46 375.6 24.5 219 361-579 8-226 (226)
187 PRK10851 sulfate/thiosulfate t 100.0 5.2E-42 1.1E-46 395.5 25.1 217 1010-1242 3-233 (353)
188 PRK13643 cbiO cobalt transport 100.0 5.3E-42 1.2E-46 387.7 24.7 216 1010-1236 2-234 (288)
189 cd03219 ABC_Mj1267_LivG_branch 100.0 4.1E-42 8.9E-47 379.7 23.2 213 1010-1236 1-233 (236)
190 PRK10744 pstB phosphate transp 100.0 9.7E-42 2.1E-46 381.3 26.3 224 1007-1240 11-249 (260)
191 cd03261 ABC_Org_Solvent_Resist 100.0 3.6E-42 7.7E-47 379.5 22.5 218 365-592 1-228 (235)
192 PRK09536 btuD corrinoid ABC tr 100.0 7.1E-42 1.5E-46 397.5 25.5 221 1009-1245 3-236 (402)
193 PRK13642 cbiO cobalt transport 100.0 9.3E-42 2E-46 384.2 25.7 217 1009-1236 4-230 (277)
194 PRK13646 cbiO cobalt transport 100.0 4.9E-42 1.1E-46 388.0 23.6 216 1010-1236 3-236 (286)
195 TIGR03258 PhnT 2-aminoethylpho 100.0 6.9E-42 1.5E-46 394.6 25.0 219 1008-1242 4-235 (362)
196 cd03256 ABC_PhnC_transporter A 100.0 6E-42 1.3E-46 379.8 23.4 212 1010-1234 1-233 (241)
197 cd03263 ABC_subfamily_A The AB 100.0 4.3E-42 9.3E-47 375.3 21.9 211 1010-1233 1-219 (220)
198 TIGR00960 3a0501s02 Type II (G 100.0 3.2E-42 7E-47 374.9 20.8 203 1010-1224 2-216 (216)
199 PRK11650 ugpC glycerol-3-phosp 100.0 4.7E-42 1E-46 396.3 22.9 217 364-591 3-225 (356)
200 cd03258 ABC_MetN_methionine_tr 100.0 7.5E-42 1.6E-46 376.7 23.4 216 1010-1236 2-231 (233)
201 PRK14267 phosphate ABC transpo 100.0 7.9E-42 1.7E-46 381.2 23.9 225 1009-1243 4-245 (253)
202 PRK09452 potA putrescine/sperm 100.0 1.3E-41 2.7E-46 393.7 26.3 218 1009-1242 14-241 (375)
203 PRK15079 oligopeptide ABC tran 100.0 1E-41 2.2E-46 390.1 25.2 224 1009-1243 8-259 (331)
204 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.3E-42 1.4E-46 383.9 22.5 219 1011-1243 26-258 (269)
205 PRK14247 phosphate ABC transpo 100.0 1.5E-41 3.2E-46 378.3 25.3 226 1009-1244 3-243 (250)
206 PRK11432 fbpC ferric transport 100.0 5.8E-42 1.3E-46 394.2 22.6 216 364-591 6-227 (351)
207 PRK14235 phosphate transporter 100.0 1.7E-41 3.7E-46 380.3 25.4 223 1007-1239 17-255 (267)
208 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-41 2.6E-46 376.8 23.7 219 1010-1241 1-231 (242)
209 PRK13634 cbiO cobalt transport 100.0 9.3E-42 2E-46 386.1 23.3 217 1010-1236 3-236 (290)
210 cd03224 ABC_TM1139_LivF_branch 100.0 8.9E-42 1.9E-46 373.5 22.3 213 1010-1235 1-221 (222)
211 COG1118 CysA ABC-type sulfate/ 100.0 4.3E-42 9.2E-47 362.7 18.9 217 1009-1241 2-233 (345)
212 cd03259 ABC_Carb_Solutes_like 100.0 5.2E-42 1.1E-46 372.5 20.3 203 1010-1228 1-213 (213)
213 cd03291 ABCC_CFTR1 The CFTR su 100.0 7.1E-41 1.5E-45 374.4 29.9 220 1006-1245 36-256 (282)
214 PRK11629 lolD lipoprotein tran 100.0 1.3E-41 2.9E-46 374.2 23.6 210 1009-1229 5-228 (233)
215 PRK13636 cbiO cobalt transport 100.0 1.4E-41 3E-46 383.7 24.3 215 1009-1236 5-232 (283)
216 PRK13651 cobalt transporter AT 100.0 1.6E-41 3.5E-46 384.9 24.8 216 1010-1236 3-255 (305)
217 PRK11000 maltose/maltodextrin 100.0 1.6E-41 3.4E-46 394.9 25.3 218 1009-1242 3-230 (369)
218 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-41 2.7E-46 377.6 23.3 212 1010-1234 2-234 (243)
219 PRK13650 cbiO cobalt transport 100.0 1.3E-41 2.9E-46 383.0 23.8 221 364-591 4-230 (279)
220 TIGR03265 PhnT2 putative 2-ami 100.0 7.3E-42 1.6E-46 394.2 22.0 217 364-592 4-226 (353)
221 PRK11831 putative ABC transpor 100.0 1.7E-41 3.7E-46 380.7 24.4 224 1009-1246 7-244 (269)
222 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.3E-41 4.9E-46 373.1 24.9 212 1010-1236 2-222 (236)
223 PRK14268 phosphate ABC transpo 100.0 2.1E-41 4.5E-46 378.2 24.8 223 1009-1241 12-248 (258)
224 TIGR03005 ectoine_ehuA ectoine 100.0 2.1E-41 4.5E-46 377.3 24.1 218 1010-1241 1-242 (252)
225 PRK13632 cbiO cobalt transport 100.0 2.3E-41 5.1E-46 380.0 24.5 216 1009-1236 7-232 (271)
226 PRK13643 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 383.6 23.4 220 365-591 2-234 (288)
227 PRK14251 phosphate ABC transpo 100.0 2.1E-41 4.6E-46 377.3 23.8 224 1009-1242 4-242 (251)
228 PRK13637 cbiO cobalt transport 100.0 2.3E-41 5E-46 382.3 24.1 220 365-591 3-235 (287)
229 COG4555 NatA ABC-type Na+ tran 100.0 3.6E-42 7.7E-47 340.7 15.2 219 365-591 2-223 (245)
230 PRK13633 cobalt transporter AT 100.0 2.6E-41 5.6E-46 381.3 24.4 217 1009-1236 4-234 (280)
231 PRK14237 phosphate transporter 100.0 4E-41 8.7E-46 377.3 25.7 221 1008-1238 19-254 (267)
232 PRK14244 phosphate ABC transpo 100.0 1.4E-41 3.1E-46 378.4 21.9 222 1010-1241 6-243 (251)
233 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-41 2.6E-46 367.1 20.5 199 1011-1225 1-205 (205)
234 PRK14259 phosphate ABC transpo 100.0 5.2E-41 1.1E-45 376.5 26.5 224 1008-1241 12-259 (269)
235 cd03264 ABC_drug_resistance_li 100.0 1.9E-41 4.1E-46 367.5 22.1 203 1010-1228 1-211 (211)
236 cd03260 ABC_PstB_phosphate_tra 100.0 1.3E-41 2.8E-46 373.1 21.0 213 365-587 1-226 (227)
237 PRK14245 phosphate ABC transpo 100.0 2.8E-41 6.1E-46 375.8 23.9 223 1009-1241 3-240 (250)
238 PRK10070 glycine betaine trans 100.0 2.8E-41 6E-46 392.4 24.8 206 1026-1242 42-261 (400)
239 PRK13652 cbiO cobalt transport 100.0 3.3E-41 7.1E-46 379.8 24.7 214 1010-1236 4-228 (277)
240 PRK13640 cbiO cobalt transport 100.0 4E-41 8.7E-46 379.8 25.4 217 1008-1236 4-233 (282)
241 TIGR01186 proV glycine betaine 100.0 8.9E-42 1.9E-46 392.1 20.1 205 380-591 6-220 (363)
242 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-41 3.3E-46 375.2 21.2 221 365-590 1-232 (236)
243 PRK14274 phosphate ABC transpo 100.0 5.3E-41 1.1E-45 375.4 25.8 224 1009-1242 12-250 (259)
244 PRK11308 dppF dipeptide transp 100.0 4.5E-41 9.7E-46 384.6 25.8 226 1009-1244 5-253 (327)
245 PRK14248 phosphate ABC transpo 100.0 3.9E-41 8.5E-46 378.2 24.8 220 1009-1238 21-255 (268)
246 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-41 2.8E-46 370.9 20.4 204 1010-1224 1-218 (218)
247 TIGR03258 PhnT 2-aminoethylpho 100.0 1.6E-41 3.5E-46 391.6 22.1 217 363-591 4-229 (362)
248 PRK13537 nodulation ABC transp 100.0 2.5E-41 5.3E-46 384.5 23.3 213 1009-1236 7-228 (306)
249 cd03266 ABC_NatA_sodium_export 100.0 2.6E-41 5.7E-46 368.5 22.6 207 1010-1228 2-218 (218)
250 PRK14236 phosphate transporter 100.0 5.1E-41 1.1E-45 377.5 25.5 223 1007-1239 23-260 (272)
251 cd03265 ABC_DrrA DrrA is the A 100.0 2.7E-41 5.9E-46 368.5 22.6 209 1010-1233 1-219 (220)
252 cd03250 ABCC_MRP_domain1 Domai 100.0 4.7E-41 1E-45 362.2 24.1 200 1010-1223 1-204 (204)
253 PRK11153 metN DL-methionine tr 100.0 2E-41 4.4E-46 391.0 22.7 220 365-591 2-231 (343)
254 PRK10575 iron-hydroxamate tran 100.0 3.1E-41 6.8E-46 378.0 23.6 221 1009-1245 11-245 (265)
255 PRK10619 histidine/lysine/argi 100.0 5E-41 1.1E-45 375.2 25.0 218 1008-1238 4-244 (257)
256 PRK14239 phosphate transporter 100.0 4.1E-41 8.9E-46 375.4 24.2 221 1009-1239 5-240 (252)
257 PRK13644 cbiO cobalt transport 100.0 4.6E-41 9.9E-46 377.6 24.7 214 1010-1236 2-225 (274)
258 cd03268 ABC_BcrA_bacitracin_re 100.0 2.8E-41 6E-46 365.3 22.1 203 1010-1228 1-208 (208)
259 PRK11607 potG putrescine trans 100.0 5.3E-41 1.2E-45 389.4 26.0 220 1008-1243 18-247 (377)
260 PRK14256 phosphate ABC transpo 100.0 5.7E-41 1.2E-45 373.8 25.2 225 1007-1241 2-242 (252)
261 PRK09452 potA putrescine/sperm 100.0 2.6E-41 5.6E-46 391.2 23.1 217 363-591 13-235 (375)
262 PRK14262 phosphate ABC transpo 100.0 4.3E-41 9.3E-46 374.6 24.0 227 1009-1245 3-244 (250)
263 cd03218 ABC_YhbG The ABC trans 100.0 3.4E-41 7.4E-46 371.3 22.9 212 1010-1235 1-222 (232)
264 TIGR03411 urea_trans_UrtD urea 100.0 4.5E-41 9.7E-46 372.7 23.8 212 1010-1235 3-231 (242)
265 PRK14240 phosphate transporter 100.0 7.8E-41 1.7E-45 372.5 25.7 224 1008-1241 2-240 (250)
266 PRK13646 cbiO cobalt transport 100.0 3.9E-41 8.4E-46 380.7 23.4 220 365-591 3-236 (286)
267 PRK13648 cbiO cobalt transport 100.0 6.5E-41 1.4E-45 376.4 25.1 216 1009-1236 7-232 (269)
268 PRK13651 cobalt transporter AT 100.0 3.6E-41 7.8E-46 382.1 23.2 220 365-591 3-255 (305)
269 PRK13634 cbiO cobalt transport 100.0 3.5E-41 7.7E-46 381.4 23.0 220 365-591 3-236 (290)
270 TIGR02211 LolD_lipo_ex lipopro 100.0 4E-41 8.6E-46 367.9 22.6 205 1010-1225 2-220 (221)
271 PRK10851 sulfate/thiosulfate t 100.0 3.3E-41 7.1E-46 388.8 22.9 215 365-591 3-227 (353)
272 PRK11264 putative amino-acid A 100.0 6E-41 1.3E-45 373.6 23.9 218 1010-1241 4-239 (250)
273 PRK09493 glnQ glutamine ABC tr 100.0 7.3E-41 1.6E-45 370.3 24.3 213 1010-1236 2-226 (240)
274 cd03301 ABC_MalK_N The N-termi 100.0 3.4E-41 7.4E-46 366.2 21.1 203 1010-1228 1-213 (213)
275 cd03247 ABCC_cytochrome_bd The 100.0 4.6E-41 1E-45 353.5 21.3 178 1010-1228 1-178 (178)
276 PRK14238 phosphate transporter 100.0 1.1E-40 2.3E-45 374.3 25.5 223 1009-1241 24-261 (271)
277 PRK14254 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 375.8 25.8 221 1008-1238 38-272 (285)
278 PRK14269 phosphate ABC transpo 100.0 5.2E-41 1.1E-45 372.4 22.6 217 365-591 3-231 (246)
279 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.1E-41 6.7E-46 368.1 20.3 205 1010-1230 1-218 (220)
280 PRK11124 artP arginine transpo 100.0 7.5E-41 1.6E-45 370.7 23.7 213 1010-1236 3-231 (242)
281 TIGR03415 ABC_choXWV_ATP choli 100.0 6.2E-41 1.4E-45 386.4 23.8 210 1025-1245 37-264 (382)
282 PRK13647 cbiO cobalt transport 100.0 5.7E-41 1.2E-45 376.8 22.9 216 364-588 4-225 (274)
283 TIGR02769 nickel_nikE nickel i 100.0 1.1E-40 2.3E-45 373.7 25.1 225 1010-1244 3-249 (265)
284 PRK14261 phosphate ABC transpo 100.0 1E-40 2.2E-45 372.0 24.7 228 1009-1246 6-248 (253)
285 PRK13537 nodulation ABC transp 100.0 4.2E-41 9.1E-46 382.6 21.9 218 363-591 6-228 (306)
286 PRK11231 fecE iron-dicitrate t 100.0 7.8E-41 1.7E-45 373.2 23.6 222 1010-1247 3-237 (255)
287 cd03256 ABC_PhnC_transporter A 100.0 6.3E-41 1.4E-45 371.7 22.7 221 365-589 1-233 (241)
288 PRK11247 ssuB aliphatic sulfon 100.0 9.9E-41 2.1E-45 369.8 24.2 204 1009-1231 12-219 (257)
289 PRK14260 phosphate ABC transpo 100.0 8.9E-41 1.9E-45 373.3 24.1 222 1008-1239 6-247 (259)
290 PRK14270 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 371.1 24.8 219 1009-1237 4-237 (251)
291 PRK11022 dppD dipeptide transp 100.0 1E-40 2.2E-45 382.0 24.9 227 1010-1244 4-252 (326)
292 PRK14243 phosphate transporter 100.0 1.4E-40 3E-45 372.2 25.5 221 1009-1239 10-252 (264)
293 PRK14249 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 370.3 25.2 220 1009-1238 4-238 (251)
294 TIGR02673 FtsE cell division A 100.0 4.9E-41 1.1E-45 365.3 20.8 201 1010-1223 2-214 (214)
295 PRK13641 cbiO cobalt transport 100.0 1.2E-40 2.5E-45 377.0 24.5 217 1009-1236 2-235 (287)
296 cd03296 ABC_CysA_sulfate_impor 100.0 6E-41 1.3E-45 370.5 21.6 215 365-591 3-227 (239)
297 PRK14275 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 375.9 24.9 226 1008-1243 38-278 (286)
298 PRK09473 oppD oligopeptide tra 100.0 1E-40 2.2E-45 382.2 24.1 228 1009-1244 12-260 (330)
299 PRK14250 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 368.4 23.5 216 364-591 3-222 (241)
300 PRK13638 cbiO cobalt transport 100.0 9.4E-41 2E-45 375.4 23.2 213 1010-1236 2-226 (271)
301 cd03225 ABC_cobalt_CbiO_domain 100.0 6E-41 1.3E-45 363.7 20.8 201 1011-1223 1-211 (211)
302 cd03258 ABC_MetN_methionine_tr 100.0 7E-41 1.5E-45 368.9 21.6 219 365-590 2-230 (233)
303 PRK09536 btuD corrinoid ABC tr 100.0 8.8E-41 1.9E-45 388.4 23.5 222 364-591 3-229 (402)
304 PRK11614 livF leucine/isoleuci 100.0 1.3E-40 2.8E-45 367.6 23.6 214 1009-1236 5-227 (237)
305 TIGR00960 3a0501s02 Type II (G 100.0 4.6E-41 9.9E-46 365.9 19.7 207 365-579 2-216 (216)
306 PRK13645 cbiO cobalt transport 100.0 1.4E-40 3E-45 377.4 24.5 220 1007-1236 4-241 (289)
307 TIGR03410 urea_trans_UrtE urea 100.0 4.3E-41 9.2E-46 369.9 19.6 212 1010-1234 1-220 (230)
308 PRK13649 cbiO cobalt transport 100.0 1.4E-40 3E-45 376.3 24.3 217 1010-1236 3-235 (280)
309 cd03292 ABC_FtsE_transporter F 100.0 7.4E-41 1.6E-45 364.0 21.2 202 1010-1224 1-214 (214)
310 cd03235 ABC_Metallic_Cations A 100.0 5.1E-41 1.1E-45 364.7 19.9 198 1011-1228 1-213 (213)
311 PRK14266 phosphate ABC transpo 100.0 2E-40 4.4E-45 369.1 25.1 224 1009-1242 3-241 (250)
312 PRK11607 potG putrescine trans 100.0 1E-40 2.2E-45 387.1 23.6 218 363-592 18-241 (377)
313 cd03259 ABC_Carb_Solutes_like 100.0 4.5E-41 9.8E-46 365.1 19.3 207 365-583 1-213 (213)
314 TIGR02315 ABC_phnC phosphonate 100.0 1.1E-40 2.4E-45 369.9 22.9 220 365-588 2-233 (243)
315 PRK13548 hmuV hemin importer A 100.0 2.2E-40 4.7E-45 369.4 25.3 213 1010-1236 3-231 (258)
316 PRK11000 maltose/maltodextrin 100.0 7.5E-41 1.6E-45 389.3 22.3 216 364-591 3-224 (369)
317 PRK14272 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 370.2 24.5 225 1009-1243 4-244 (252)
318 TIGR00968 3a0106s01 sulfate AB 100.0 2E-40 4.3E-45 365.4 24.5 211 1010-1236 1-221 (237)
319 cd03300 ABC_PotA_N PotA is an 100.0 9.2E-41 2E-45 367.1 21.7 212 1010-1237 1-222 (232)
320 PRK14271 phosphate ABC transpo 100.0 3E-40 6.5E-45 371.1 26.3 221 1009-1239 21-255 (276)
321 COG4175 ProV ABC-type proline/ 100.0 3.8E-41 8.3E-46 355.0 17.7 218 364-592 4-256 (386)
322 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.8E-40 6E-45 357.0 24.9 202 363-584 5-206 (207)
323 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-40 2.4E-45 370.3 22.4 217 365-591 2-233 (247)
324 PRK14252 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 370.9 25.6 224 1006-1239 13-253 (265)
325 PRK13635 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 374.0 23.7 220 364-591 5-230 (279)
326 TIGR01288 nodI ATP-binding ABC 100.0 1.3E-40 2.8E-45 379.6 23.4 213 1009-1236 4-225 (303)
327 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-40 2.6E-45 364.6 22.1 216 365-589 1-220 (222)
328 cd03263 ABC_subfamily_A The AB 100.0 7.5E-41 1.6E-45 365.4 20.4 215 365-588 1-219 (220)
329 PRK14241 phosphate transporter 100.0 1.9E-40 4.1E-45 370.7 24.1 219 1009-1237 4-244 (258)
330 PRK10253 iron-enterobactin tra 100.0 2.1E-40 4.5E-45 371.4 24.4 214 1008-1235 6-233 (265)
331 PRK14253 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 368.1 25.0 221 1009-1239 3-237 (249)
332 cd03290 ABCC_SUR1_N The SUR do 100.0 2.4E-40 5.2E-45 360.5 24.2 210 1011-1223 2-218 (218)
333 PRK13639 cbiO cobalt transport 100.0 1.4E-40 3.1E-45 374.2 23.0 214 1010-1236 2-227 (275)
334 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-40 2.3E-45 369.2 21.5 217 365-590 1-225 (242)
335 PRK14242 phosphate transporter 100.0 1.1E-40 2.4E-45 371.9 21.8 218 364-591 6-238 (253)
336 TIGR03873 F420-0_ABC_ATP propo 100.0 2E-40 4.2E-45 370.2 23.7 212 1010-1235 2-226 (256)
337 PRK14263 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 368.1 25.3 224 1009-1242 8-252 (261)
338 TIGR03522 GldA_ABC_ATP gliding 100.0 1.7E-40 3.6E-45 378.0 23.5 212 1010-1236 3-222 (301)
339 COG1137 YhbG ABC-type (unclass 100.0 1.1E-41 2.4E-46 336.9 11.9 223 364-592 4-230 (243)
340 PRK10584 putative ABC transpor 100.0 2.2E-40 4.7E-45 363.7 23.5 208 1009-1227 6-227 (228)
341 PRK15112 antimicrobial peptide 100.0 2.7E-40 5.8E-45 370.6 24.7 229 1009-1248 4-253 (267)
342 PRK11300 livG leucine/isoleuci 100.0 2.4E-40 5.1E-45 370.0 24.0 214 1009-1236 5-244 (255)
343 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-40 2.4E-45 367.3 21.0 216 365-590 1-222 (232)
344 PRK00349 uvrA excinuclease ABC 100.0 1.7E-39 3.7E-44 408.7 34.4 109 1137-1245 818-937 (943)
345 PRK15093 antimicrobial peptide 100.0 2.7E-40 5.8E-45 380.1 24.9 227 1010-1244 4-257 (330)
346 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.8E-40 3.9E-45 366.0 22.3 216 365-591 2-222 (236)
347 PRK11629 lolD lipoprotein tran 100.0 1.8E-40 3.9E-45 365.2 22.3 214 364-584 5-228 (233)
348 PRK13536 nodulation factor exp 100.0 1.9E-40 4E-45 380.6 23.3 213 1009-1236 41-262 (340)
349 PRK13636 cbiO cobalt transport 100.0 1.7E-40 3.7E-45 374.9 22.6 219 364-591 5-232 (283)
350 COG0410 LivF ABC-type branched 100.0 2E-40 4.4E-45 339.7 21.0 221 364-592 3-228 (237)
351 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.4E-40 5.2E-45 358.8 22.8 201 1010-1228 1-211 (211)
352 PRK14258 phosphate ABC transpo 100.0 2.9E-40 6.4E-45 369.3 24.2 222 1008-1239 6-249 (261)
353 PRK14273 phosphate ABC transpo 100.0 2.3E-40 5E-45 369.4 23.3 218 364-591 7-239 (254)
354 cd03246 ABCC_Protease_Secretio 100.0 2E-40 4.4E-45 346.8 21.2 172 1010-1224 1-173 (173)
355 PRK10247 putative ABC transpor 100.0 2.3E-40 5.1E-45 361.8 22.5 210 1009-1231 7-223 (225)
356 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8.1E-41 1.8E-45 364.7 18.8 208 365-579 1-218 (218)
357 PRK10908 cell division protein 100.0 2.8E-40 6E-45 361.1 22.9 204 1010-1226 2-217 (222)
358 PRK10895 lipopolysaccharide AB 100.0 4.3E-40 9.2E-45 364.4 24.7 213 1010-1236 4-227 (241)
359 PRK10771 thiQ thiamine transpo 100.0 4E-40 8.7E-45 362.2 24.3 209 1010-1236 2-220 (232)
360 cd03299 ABC_ModC_like Archeal 100.0 3.6E-40 7.7E-45 362.9 23.9 211 1010-1237 1-221 (235)
361 cd03266 ABC_NatA_sodium_export 100.0 1.4E-40 3.1E-45 362.7 20.5 211 365-583 2-218 (218)
362 cd03265 ABC_DrrA DrrA is the A 100.0 1.3E-40 2.9E-45 363.1 20.3 213 365-588 1-219 (220)
363 PRK10744 pstB phosphate transp 100.0 2.9E-40 6.4E-45 369.4 23.4 219 363-591 12-245 (260)
364 PRK13536 nodulation factor exp 100.0 1.8E-40 3.8E-45 380.8 22.1 217 364-591 41-262 (340)
365 PRK14255 phosphate ABC transpo 100.0 3.7E-40 7.9E-45 367.5 24.1 223 1009-1241 5-242 (252)
366 COG0411 LivG ABC-type branched 100.0 7.9E-41 1.7E-45 345.5 17.2 221 364-592 4-241 (250)
367 PRK13642 cbiO cobalt transport 100.0 2.6E-40 5.7E-45 372.5 23.0 222 364-592 4-231 (277)
368 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.6E-39 3.5E-44 363.5 29.1 216 361-595 36-252 (282)
369 PRK14246 phosphate ABC transpo 100.0 5.4E-40 1.2E-44 365.3 25.0 227 1009-1245 10-251 (257)
370 cd03269 ABC_putative_ATPase Th 100.0 2.1E-40 4.6E-45 359.0 21.2 201 1010-1228 1-210 (210)
371 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-40 2.8E-45 359.1 19.3 199 366-580 1-205 (205)
372 TIGR01288 nodI ATP-binding ABC 100.0 2E-40 4.4E-45 378.0 21.7 217 364-591 4-225 (303)
373 PRK14265 phosphate ABC transpo 100.0 9.1E-40 2E-44 367.1 26.7 220 1009-1238 20-261 (274)
374 COG0410 LivF ABC-type branched 100.0 3.1E-40 6.7E-45 338.4 20.7 221 1009-1237 3-228 (237)
375 PRK11144 modC molybdate transp 100.0 4.2E-40 9.1E-45 381.5 24.6 213 1010-1239 2-222 (352)
376 PRK13644 cbiO cobalt transport 100.0 3.8E-40 8.2E-45 370.2 23.3 218 365-591 2-225 (274)
377 cd03262 ABC_HisP_GlnQ_permease 100.0 2E-40 4.4E-45 360.3 20.2 201 1010-1224 1-213 (213)
378 cd03257 ABC_NikE_OppD_transpor 100.0 5.8E-40 1.3E-44 360.9 24.0 209 1010-1228 2-228 (228)
379 PRK13641 cbiO cobalt transport 100.0 3.6E-40 7.7E-45 373.0 22.9 220 365-591 3-235 (287)
380 TIGR02211 LolD_lipo_ex lipopro 100.0 2.6E-40 5.5E-45 361.5 21.0 209 365-580 2-220 (221)
381 cd03264 ABC_drug_resistance_li 100.0 1.6E-40 3.4E-45 360.3 19.2 207 365-583 1-211 (211)
382 PRK11701 phnK phosphonate C-P 100.0 8.4E-40 1.8E-44 365.5 25.4 223 1009-1244 6-250 (258)
383 cd03250 ABCC_MRP_domain1 Domai 100.0 5.8E-40 1.3E-44 353.7 23.1 200 365-578 1-204 (204)
384 PRK09493 glnQ glutamine ABC tr 100.0 2.8E-40 6.2E-45 365.6 21.2 217 365-591 2-226 (240)
385 PRK14264 phosphate ABC transpo 100.0 9.2E-40 2E-44 372.3 25.9 220 1008-1237 44-291 (305)
386 PRK14235 phosphate transporter 100.0 4E-40 8.7E-45 369.2 22.5 219 362-590 17-251 (267)
387 cd03268 ABC_BcrA_bacitracin_re 100.0 3.5E-40 7.7E-45 356.7 21.3 203 365-583 1-208 (208)
388 PRK13632 cbiO cobalt transport 100.0 5E-40 1.1E-44 369.3 23.2 220 364-591 7-232 (271)
389 PRK14259 phosphate ABC transpo 100.0 6.5E-40 1.4E-44 367.6 24.0 219 363-591 12-254 (269)
390 PRK13547 hmuV hemin importer A 100.0 7.6E-40 1.7E-44 365.9 24.4 212 1010-1235 2-244 (272)
391 PRK15079 oligopeptide ABC tran 100.0 3E-40 6.5E-45 378.0 21.6 227 364-597 8-259 (331)
392 COG1131 CcmA ABC-type multidru 100.0 2.7E-40 5.9E-45 371.8 20.8 214 364-591 4-227 (293)
393 PRK10070 glycine betaine trans 100.0 3.6E-40 7.9E-45 383.0 22.4 221 364-591 4-255 (400)
394 TIGR02769 nickel_nikE nickel i 100.0 3.8E-40 8.2E-45 369.3 21.7 224 365-595 3-245 (265)
395 PRK13652 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 369.7 23.3 219 364-591 3-228 (277)
396 PRK14247 phosphate ABC transpo 100.0 5.2E-40 1.1E-44 365.8 22.7 218 364-591 3-235 (250)
397 PRK13645 cbiO cobalt transport 100.0 4.8E-40 1E-44 373.0 22.7 222 363-591 5-241 (289)
398 PRK11831 putative ABC transpor 100.0 3E-40 6.5E-45 370.6 20.7 218 364-591 7-234 (269)
399 PRK13648 cbiO cobalt transport 100.0 8.1E-40 1.8E-44 367.5 24.0 220 364-591 7-232 (269)
400 PRK11614 livF leucine/isoleuci 100.0 5.4E-40 1.2E-44 362.7 22.2 218 364-590 5-226 (237)
401 PRK10575 iron-hydroxamate tran 100.0 6.1E-40 1.3E-44 367.6 22.8 217 364-590 11-237 (265)
402 PRK13640 cbiO cobalt transport 100.0 7.3E-40 1.6E-44 369.5 23.5 221 363-591 4-233 (282)
403 PRK10895 lipopolysaccharide AB 100.0 5.5E-40 1.2E-44 363.6 22.0 217 364-590 3-226 (241)
404 TIGR01277 thiQ thiamine ABC tr 100.0 8.7E-40 1.9E-44 354.6 23.1 202 1010-1229 1-212 (213)
405 TIGR03410 urea_trans_UrtE urea 100.0 4.4E-40 9.6E-45 361.8 21.0 214 365-588 1-219 (230)
406 PRK11264 putative amino-acid A 100.0 4.1E-40 8.9E-45 366.9 21.1 218 364-591 3-234 (250)
407 TIGR03411 urea_trans_UrtD urea 100.0 6.7E-40 1.5E-44 363.3 22.6 221 365-590 3-231 (242)
408 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.6E-40 5.7E-45 370.8 19.5 216 366-591 26-251 (269)
409 PRK13649 cbiO cobalt transport 100.0 6.4E-40 1.4E-44 370.8 22.7 220 365-591 3-235 (280)
410 PRK13633 cobalt transporter AT 100.0 8E-40 1.7E-44 369.1 23.4 221 364-591 4-234 (280)
411 cd03247 ABCC_cytochrome_bd The 100.0 5.9E-40 1.3E-44 345.2 20.8 178 365-583 1-178 (178)
412 TIGR03522 GldA_ABC_ATP gliding 100.0 4.8E-40 1E-44 374.2 21.7 216 365-591 3-222 (301)
413 TIGR01188 drrA daunorubicin re 100.0 3.9E-40 8.5E-45 375.5 21.0 200 1025-1236 6-214 (302)
414 PRK14267 phosphate ABC transpo 100.0 5E-40 1.1E-44 366.7 21.4 220 364-591 4-238 (253)
415 TIGR01978 sufC FeS assembly AT 100.0 7.3E-40 1.6E-44 363.6 22.6 213 1010-1234 1-233 (243)
416 PRK10418 nikD nickel transport 100.0 1.3E-39 2.9E-44 362.7 24.7 227 1009-1249 4-245 (254)
417 PRK14268 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 366.4 22.0 220 364-591 12-243 (258)
418 PRK11247 ssuB aliphatic sulfon 100.0 7.9E-40 1.7E-44 362.6 22.4 204 364-586 12-219 (257)
419 PRK13638 cbiO cobalt transport 100.0 7.5E-40 1.6E-44 368.1 22.6 217 365-591 2-226 (271)
420 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.3E-40 7E-45 360.1 19.0 209 365-585 1-218 (220)
421 cd03257 ABC_NikE_OppD_transpor 100.0 5.4E-40 1.2E-44 361.1 20.7 213 365-583 2-228 (228)
422 PRK14274 phosphate ABC transpo 100.0 9.6E-40 2.1E-44 365.3 23.0 220 364-591 12-244 (259)
423 COG1131 CcmA ABC-type multidru 100.0 6.8E-40 1.5E-44 368.6 21.8 214 1009-1236 4-227 (293)
424 cd03301 ABC_MalK_N The N-termi 100.0 4.3E-40 9.2E-45 357.6 19.5 207 365-583 1-213 (213)
425 PRK14248 phosphate ABC transpo 100.0 1.2E-39 2.6E-44 366.1 23.6 220 364-591 21-253 (268)
426 PRK09984 phosphonate/organopho 100.0 1.7E-39 3.7E-44 363.9 24.7 223 1009-1248 4-252 (262)
427 PRK11231 fecE iron-dicitrate t 100.0 8.5E-40 1.8E-44 364.8 22.0 216 365-590 3-227 (255)
428 TIGR03005 ectoine_ehuA ectoine 100.0 6.3E-40 1.4E-44 365.4 20.9 217 365-591 1-237 (252)
429 PRK14249 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 362.7 23.3 222 364-591 4-236 (251)
430 PRK14240 phosphate transporter 100.0 1.2E-39 2.6E-44 363.0 23.0 218 364-591 3-235 (250)
431 cd03225 ABC_cobalt_CbiO_domain 100.0 4.7E-40 1E-44 356.7 19.1 205 366-578 1-211 (211)
432 PRK13548 hmuV hemin importer A 100.0 1.4E-39 3.1E-44 362.9 23.4 216 365-590 3-230 (258)
433 PRK10619 histidine/lysine/argi 100.0 8.2E-40 1.8E-44 365.4 21.5 219 363-591 4-242 (257)
434 COG4598 HisP ABC-type histidin 100.0 2.4E-40 5.3E-45 320.1 14.8 217 364-591 6-242 (256)
435 TIGR03415 ABC_choXWV_ATP choli 100.0 7.9E-40 1.7E-44 377.3 21.9 205 380-591 37-255 (382)
436 PRK10247 putative ABC transpor 100.0 1.1E-39 2.4E-44 356.5 21.6 213 364-586 7-223 (225)
437 TIGR02142 modC_ABC molybdenum 100.0 1.4E-39 2.9E-44 378.0 23.6 212 1014-1241 4-227 (354)
438 COG0444 DppD ABC-type dipeptid 100.0 1.3E-39 2.9E-44 351.9 21.8 225 1010-1245 2-253 (316)
439 PRK11308 dppF dipeptide transp 100.0 1E-39 2.2E-44 373.4 22.0 227 364-597 5-252 (327)
440 PRK10253 iron-enterobactin tra 100.0 1.8E-39 3.9E-44 363.8 23.5 219 363-590 6-233 (265)
441 PRK14238 phosphate transporter 100.0 1.4E-39 3.1E-44 365.3 22.6 220 364-591 24-256 (271)
442 PRK11300 livG leucine/isoleuci 100.0 1.4E-39 3.1E-44 363.7 22.4 222 364-590 5-243 (255)
443 PRK14245 phosphate ABC transpo 100.0 1.4E-39 3.1E-44 362.1 22.3 220 364-591 3-235 (250)
444 PRK13639 cbiO cobalt transport 100.0 1.5E-39 3.3E-44 365.9 22.5 218 365-591 2-227 (275)
445 TIGR02673 FtsE cell division A 100.0 8.5E-40 1.8E-44 355.5 19.8 205 365-578 2-214 (214)
446 PRK11124 artP arginine transpo 100.0 1.7E-39 3.6E-44 359.9 22.4 215 365-589 3-229 (242)
447 PRK11248 tauB taurine transpor 100.0 1.7E-39 3.6E-44 361.0 22.1 202 1010-1230 2-215 (255)
448 PRK14237 phosphate transporter 100.0 2.2E-39 4.8E-44 363.2 23.2 220 362-591 18-252 (267)
449 cd03292 ABC_FtsE_transporter F 100.0 1E-39 2.2E-44 355.1 19.7 206 365-579 1-214 (214)
450 cd03235 ABC_Metallic_Cations A 100.0 8.2E-40 1.8E-44 355.2 18.9 202 366-583 1-213 (213)
451 COG4175 ProV ABC-type proline/ 100.0 9E-40 1.9E-44 344.7 18.5 225 1009-1244 4-263 (386)
452 PRK14236 phosphate transporter 100.0 2E-39 4.2E-44 364.7 22.6 220 362-591 23-257 (272)
453 cd03246 ABCC_Protease_Secretio 100.0 1.6E-39 3.5E-44 339.9 20.3 172 365-579 1-173 (173)
454 TIGR02982 heterocyst_DevA ABC 100.0 2.2E-39 4.7E-44 353.3 22.2 204 1010-1224 2-219 (220)
455 PRK11022 dppD dipeptide transp 100.0 1.3E-39 2.9E-44 372.8 21.4 227 364-597 3-251 (326)
456 TIGR03873 F420-0_ABC_ATP propo 100.0 1.5E-39 3.3E-44 363.0 21.4 221 365-590 2-226 (256)
457 PRK14243 phosphate transporter 100.0 2.8E-39 6.1E-44 361.7 23.5 218 364-591 10-249 (264)
458 cd03269 ABC_putative_ATPase Th 100.0 8.5E-40 1.8E-44 354.3 18.6 205 365-583 1-210 (210)
459 PRK14239 phosphate transporter 100.0 1.7E-39 3.8E-44 362.3 21.6 220 364-591 5-237 (252)
460 cd03290 ABCC_SUR1_N The SUR do 100.0 3.6E-39 7.7E-44 351.4 23.5 210 366-578 2-218 (218)
461 COG4555 NatA ABC-type Na+ tran 100.0 8.7E-40 1.9E-44 323.8 16.6 213 1010-1236 2-223 (245)
462 PRK10908 cell division protein 100.0 2.2E-39 4.7E-44 354.1 21.6 208 365-581 2-217 (222)
463 PRK10584 putative ABC transpor 100.0 2.6E-39 5.7E-44 355.2 22.2 212 364-582 6-227 (228)
464 PRK14261 phosphate ABC transpo 100.0 2.4E-39 5.1E-44 361.0 22.0 218 364-591 6-238 (253)
465 cd03234 ABCG_White The White s 100.0 1.3E-39 2.8E-44 356.7 19.5 205 1010-1228 4-226 (226)
466 PRK10419 nikE nickel transport 100.0 2.9E-39 6.2E-44 362.2 22.6 223 1010-1243 4-248 (268)
467 PRK14251 phosphate ABC transpo 100.0 2.7E-39 5.8E-44 360.4 22.2 218 364-591 4-236 (251)
468 COG4619 ABC-type uncharacteriz 100.0 9.2E-40 2E-44 313.2 15.7 193 1024-1226 15-214 (223)
469 PRK11144 modC molybdate transp 100.0 2.7E-39 5.8E-44 374.7 22.9 211 365-592 2-220 (352)
470 PRK09473 oppD oligopeptide tra 100.0 1.7E-39 3.7E-44 372.1 21.0 230 364-597 12-259 (330)
471 PRK14253 phosphate ABC transpo 100.0 2.9E-39 6.2E-44 359.7 22.2 217 364-590 3-233 (249)
472 cd03262 ABC_HisP_GlnQ_permease 100.0 1.2E-39 2.7E-44 354.2 18.7 205 365-579 1-213 (213)
473 PRK14256 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 359.8 22.5 220 362-591 2-237 (252)
474 TIGR01188 drrA daunorubicin re 100.0 1.5E-39 3.3E-44 370.6 20.3 204 380-591 6-214 (302)
475 PRK14271 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 362.8 22.3 220 364-591 21-252 (276)
476 PRK14270 phosphate ABC transpo 100.0 3.5E-39 7.7E-44 359.2 22.5 218 364-591 4-236 (251)
477 PRK14244 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 362.0 19.6 217 365-591 6-238 (251)
478 PRK13547 hmuV hemin importer A 100.0 3.4E-39 7.4E-44 360.6 22.2 221 365-590 2-244 (272)
479 TIGR02323 CP_lyasePhnK phospho 100.0 8.8E-39 1.9E-43 356.7 25.5 223 1009-1244 3-247 (253)
480 PRK00635 excinuclease ABC subu 100.0 4.9E-38 1.1E-42 409.2 35.8 212 1009-1236 600-907 (1809)
481 PRK14254 phosphate ABC transpo 100.0 5E-39 1.1E-43 362.6 23.0 219 363-591 38-270 (285)
482 TIGR03740 galliderm_ABC gallid 100.0 4.4E-39 9.6E-44 351.9 22.0 205 1010-1232 1-210 (223)
483 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.4E-39 9.5E-44 349.0 21.7 205 365-583 1-211 (211)
484 PRK09984 phosphonate/organopho 100.0 6.6E-39 1.4E-43 359.1 23.3 220 364-588 4-240 (262)
485 PRK14262 phosphate ABC transpo 100.0 4.4E-39 9.5E-44 358.4 21.6 218 364-591 3-235 (250)
486 PRK14260 phosphate ABC transpo 100.0 4E-39 8.6E-44 360.0 21.3 218 364-591 7-244 (259)
487 PRK14275 phosphate ABC transpo 100.0 6.1E-39 1.3E-43 362.4 23.0 221 363-591 38-271 (286)
488 PRK14241 phosphate transporter 100.0 4.4E-39 9.4E-44 359.7 21.6 220 364-591 4-243 (258)
489 COG4181 Predicted ABC-type tra 100.0 1.6E-39 3.5E-44 312.6 15.4 212 364-582 6-227 (228)
490 cd03230 ABC_DR_subfamily_A Thi 100.0 4.5E-39 9.7E-44 336.6 20.2 170 1010-1224 1-173 (173)
491 COG1123 ATPase components of v 100.0 4.1E-39 8.8E-44 373.5 21.8 231 363-598 279-528 (539)
492 cd03228 ABCC_MRP_Like The MRP 100.0 5.9E-39 1.3E-43 335.0 20.9 171 1010-1223 1-171 (171)
493 PRK10771 thiQ thiamine transpo 100.0 1E-38 2.3E-43 351.0 24.0 214 365-591 2-220 (232)
494 PRK14272 phosphate ABC transpo 100.0 5.3E-39 1.1E-43 358.4 21.7 220 364-591 4-237 (252)
495 PRK14265 phosphate ABC transpo 100.0 1.2E-38 2.6E-43 358.1 24.3 219 363-591 19-259 (274)
496 PRK11701 phnK phosphonate C-P 100.0 7.4E-39 1.6E-43 357.9 22.4 218 364-591 6-242 (258)
497 cd03229 ABC_Class3 This class 100.0 6.2E-39 1.3E-43 337.2 20.5 172 1010-1223 1-178 (178)
498 PRK14252 phosphate ABC transpo 100.0 8.7E-39 1.9E-43 358.5 22.8 219 362-590 14-249 (265)
499 KOG0066 eIF2-interacting prote 100.0 6.6E-38 1.4E-42 339.3 28.6 192 1009-1226 586-781 (807)
500 PRK15093 antimicrobial peptide 100.0 6.4E-39 1.4E-43 368.7 22.1 227 364-597 3-256 (330)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-205 Score=1864.19 Aligned_cols=1216 Identities=52% Similarity=0.875 Sum_probs=1115.8
Q ss_pred CchHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000856 23 SLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSY 102 (1252)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1252)
..++.++++|..+.++.++++|.+++++.|+..|++++++++++|.+..... . ...+....+++++++++++.+++.|
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~lg~~~~~~~~ 89 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN-K-IASSEVSKVALYFVYLGVGVFISGF 89 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc-h-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6679999999999999999999999999999999999999999999876542 2 2235677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 103 AEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV 182 (1252)
Q Consensus 103 ~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 182 (1252)
++..||.+.++|+..++|.+++++++|++++|||.+ .+|++.+++++|++.+++++++.++.+++.+.++++++++.|+
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999976 6799999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHH
Q 000856 183 SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGY 262 (1252)
Q Consensus 183 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 262 (1252)
..|+|+++++.+.|++.+...++.+.+.+.+.+.+++++++.+++.|++.++|||.+|+.|+++.+||.+..+...+...
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 263 KAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEII 342 (1252)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 342 (1252)
+...+.++..++.+++.++++++.+|||+.++..+..++|++++.++.++.....+++..+.+..+..+++|+.+|++.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCc
Q 000856 343 KQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAG 422 (1252)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 422 (1252)
+..|..++....+......++.|+|+||+|+||++++.++|+|+||+|++|+.+||||||||||||++++|.|+|+|++|
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G 408 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG 408 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc
Confidence 99887765443333444567899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCC
Q 000856 423 HVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGV 502 (1252)
Q Consensus 423 ~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 502 (1252)
+|++||.|+++++.+|+|++||.|.|+|.||++||+|||.||+|+++.+++.++++.+++++|+..+|+|++|.+||+|.
T Consensus 409 ~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 409 EVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred eEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEe
Q 000856 503 QLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 503 ~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
+|||||||||||||||+++|+||||||||||||+++++.++++|++.++|+|.|+|+||++++++||+|++|++|+|+|.
T Consensus 489 qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~ 568 (1228)
T KOG0055|consen 489 QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQ 568 (1228)
T ss_pred CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCccccccccccc
Q 000856 583 GTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAET 662 (1252)
Q Consensus 583 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1252)
|+|+||++..|.|.++++.|+...+.+..++..+.......+...+..... ..+.. ..........+ ..+.++
T Consensus 569 G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~-----~~~~~-~~~~~~~~~~~-~e~~~~ 641 (1228)
T KOG0055|consen 569 GTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPS-----LSRGS-NRSNLLSVKPE-GEDPEE 641 (1228)
T ss_pred cCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhcccccccccc-----ccCCc-ccccccccccc-cccccc
Confidence 999999999999999999997655322100000000000000000000000 00000 00000000000 000000
Q ss_pred ccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHH
Q 000856 663 DRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAV 742 (1252)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1252)
..........+++++++++|.|++++++.+.+++.|+..|++++.++..+..+...++.........|.++|+++++...
T Consensus 642 ~~~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~ 721 (1228)
T KOG0055|consen 642 PVSEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSG 721 (1228)
T ss_pred ccccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111145678999999999999999999999999999999999999999988866555444444569999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 743 VAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSF 822 (1252)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~ 822 (1252)
+..++++|++.+.+++++.|+|..+|+++++++++|||.+++. |.+.+|+.+|...++..+...+..+++++.+++.++
T Consensus 722 i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~i 800 (1228)
T KOG0055|consen 722 ITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGI 800 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhH
Q 000856 823 IVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVP 902 (1252)
Q Consensus 823 i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~ 902 (1252)
++.|+++|++++++++++|++++..+.+.+.+.....+......+......|++++++||++|+.|+++.+.|.+.++..
T Consensus 801 iiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p 880 (1228)
T KOG0055|consen 801 IIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKP 880 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 903 QSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGS 982 (1252)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r 982 (1252)
.+...++..+.++.+++++.+.++..++++|+|.+++..|.+++.+++.++.++.+....+.+..++.|++.++..++.+
T Consensus 881 ~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~ 960 (1228)
T KOG0055|consen 881 RKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGS 960 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccC
Q 000856 983 VFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFY 1062 (1252)
Q Consensus 983 i~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~ 1062 (1252)
+++++++++..+++.+.....++.+|+|+|+||+|+||++|+.+||+|+||+|++|+.+||||||||||||++.+|.|||
T Consensus 961 iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfY 1040 (1228)
T KOG0055|consen 961 IFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFY 1040 (1228)
T ss_pred HHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 99999998877665433333456789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCcc
Q 000856 1063 DPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPV 1142 (1252)
Q Consensus 1063 ~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~v 1142 (1252)
+|++|.|.|||+||++++++.||++|++|.|||.||++||||||.||.++++++|+.+|++.+++|+||.+||+||||+|
T Consensus 1041 dp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~v 1120 (1228)
T KOG0055|consen 1041 DPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRV 1120 (1228)
T ss_pred CCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCcc
Confidence 99999999999999999999999999999999999999999999999666899999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCC
Q 000856 1143 GERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDG 1222 (1252)
Q Consensus 1143 ge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G 1222 (1252)
||+|.+||||||||||||||++|||+||||||||||||.++|+.+|++|++...|||+|+|||||+|+++||.|+|++||
T Consensus 1121 GerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G 1200 (1228)
T KOG0055|consen 1121 GERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNG 1200 (1228)
T ss_pred CcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecChhhhhcCCCchhHHHHHHhhh
Q 000856 1223 RIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1223 ~Ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
+|+|.|||++|+++ +|.|++|++.|..
T Consensus 1201 ~VvE~GtH~~L~~~-~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1201 KVVEQGTHDELLAK-RGIYFRLVQLQSS 1227 (1228)
T ss_pred EEEecccHHHHHhC-CCchHHHhhhccC
Confidence 99999999999995 9999999999863
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.5e-168 Score=1660.35 Aligned_cols=1213 Identities=30% Similarity=0.494 Sum_probs=1013.5
Q ss_pred CCchHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000856 22 QSLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSS 101 (1252)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1252)
.+.+|.++|+|..+.+|..++++++++++.+++.|++++++++++|.+.... ....+++++++++++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~--------~~~~~~~~~~~~~i~~~~~~ 114 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGE--------NVNDIIFSLVLIGIFQFILS 114 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------hHHHHHHHHHHHHHHHHHHH
Confidence 5567999999999888888999999999999999999999999999764211 12234556677788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 102 YAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF 181 (1252)
Q Consensus 102 ~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 181 (1252)
|++.+++.++++++..++|.+++++++++|++|||.. ++|++++++++|++.+++.+...+..++..+++++++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999975 789999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHH
Q 000856 182 VSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLG 261 (1252)
Q Consensus 182 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 261 (1252)
+++|+|++++++++|+++++..++.+++++..++.++..++.++.+.|+++|+++||+|+.|+.+.++|.+..++..+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888899999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 262 YKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNG--------VTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKA 333 (1252)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 333 (1252)
.+.....++..++..++..+++++++|+|++++.+| .+++|.++++++..+.....+..+.+.+..++++..
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888888888888888888999999999999875 578888888776666656666677778889999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHH
Q 000856 334 AGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLI 413 (1252)
Q Consensus 334 s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l 413 (1252)
|++|+.++++.+++.+. .......+. .+.|+++||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|
T Consensus 354 a~~ri~~ii~~~~~~~~-~~~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 431 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVEN-NDDGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLI 431 (1466)
T ss_pred HHHHHHHHHcCCCCCCC-CCCCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999998765432 111111111 2369999999999865445799999999999999999999999999999999
Q ss_pred hcccCCCCcEEEE-CCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCC--------------------------
Q 000856 414 ERFYDPNAGHVLL-DNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKP-------------------------- 466 (1252)
Q Consensus 414 ~g~~~~~~G~i~~-~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~-------------------------- 466 (1252)
+|+|+|++|+|.+ ||.++++++..++|++|+||+|+|.||++||+|||.+|.+
T Consensus 432 ~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1466)
T PTZ00265 432 ERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKR 511 (1466)
T ss_pred HHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccc
Confidence 9999999999999 5799999999999999999999999999999999999742
Q ss_pred -------------------------------CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 467 -------------------------------EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 467 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
..+++++.++++.+++++++..+|+|++|.+|++|.+|||||||||+||
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIA 591 (1466)
T PTZ00265 512 NSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIA 591 (1466)
T ss_pred ccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHH
Confidence 2346789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCC----------------
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQG---------------- 577 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G---------------- 577 (1252)
|||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||++++..||+|++|++|
T Consensus 592 RAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~ 671 (1466)
T PTZ00265 592 RAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPT 671 (1466)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccc
Confidence 99999999999999999999999999999999985 489999999999999999999999986
Q ss_pred -------------------------------EEEEecChHHHHh-cccchHHHHHHHHhhcccCCCCC-Ccccc-ccccc
Q 000856 578 -------------------------------QVVETGTHEELIA-KAGAYASLIRFQEMVRNRDFANP-STRRS-RSTRL 623 (1252)
Q Consensus 578 -------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 623 (1252)
+|+|+|+|+||++ .+|.|+.+.+.|.........+. ..... .....
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~ 751 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAY 751 (1466)
T ss_pred ccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccc
Confidence 5999999999998 68999999987754322110000 00000 00000
Q ss_pred ccccccccccccccc--cccCCcc-ccCCCCcccccccccccc-c---------CCCCCchHHHHHHHhhCCchHHHHHH
Q 000856 624 SHSLSTKSLSLRSGS--LRNLSYS-YSTGADGRIEMVSNAETD-R---------KNPAPDGYFLRLLKLNAPEWPYSIMG 690 (1252)
Q Consensus 624 ~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1252)
............... .+..... .........+. .+.+.. + ..+.....+.++++...+.++.++++
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1466)
T PTZ00265 752 KDSERGYDPDEMNGNSKHENESASNKKSCKMSDENA-SENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTII 830 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccc-cchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 000000000000000 0000000 00000000000 000000 0 00111113444455555555567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 691 AIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAA 770 (1252)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 770 (1252)
++++++.+++.++++++++.+++.++.. .........|.+++++++++..++.+++.|+..+.+.++..++|.++|++
T Consensus 831 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 831 ALSILVAGGLYPVFALLYAKYVSTLFDF--ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999876532 11222234567777778888888899999999999999999999999999
Q ss_pred HHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 771 ILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQ 850 (1252)
Q Consensus 771 ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~ 850 (1252)
++++|++|||..++++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++++++++++.......
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998788999999999999999999999999999999999999999999999999887765554443332222
Q ss_pred HHHHhhHHH--H-------------HHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000856 851 QLSLKGFAG--D-------------TAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGI 915 (1252)
Q Consensus 851 ~~~~~~~~~--~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1252)
.+....... . ..+..+.....+.|+++|+++||+|+.|+++.+++.+..+...+...+.....++
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111000 0 1223556788899999999999999999999999999999998888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000856 916 LFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDP 995 (1252)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 995 (1252)
..++..++..+..++++|+|.+++..|.+++|++++++.+......++..+.+.++++.++..+.+|++++++.+++.+.
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~ 1148 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDV 1148 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999999999999999999988777666667888899999999999999999999987653321
Q ss_pred CCCCCCC---CCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC--------
Q 000856 996 DDPDAEP---VETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-------- 1064 (1252)
Q Consensus 996 ~~~~~~~---~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-------- 1064 (1252)
.+..... .....|.|+|+||+|+||++++.+||+|+||+|+||+++||||+||||||||+++|+|||+|
T Consensus 1149 ~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~ 1228 (1466)
T PTZ00265 1149 RDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVF 1228 (1466)
T ss_pred CCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccc
Confidence 1111111 12345789999999999876556899999999999999999999999999999999999999
Q ss_pred ----------------------------------------------CCceEEECCcccCCCCHHHHhcccEEEccccccC
Q 000856 1065 ----------------------------------------------TAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALF 1098 (1252)
Q Consensus 1065 ----------------------------------------------~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf 1098 (1252)
++|+|++||+||+++++++||++|+||||||+||
T Consensus 1229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF 1308 (1466)
T PTZ00265 1229 KNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF 1308 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc
Confidence 6999999999999999999999999999999999
Q ss_pred cccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCC
Q 000856 1099 AASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSA 1178 (1252)
Q Consensus 1099 ~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~ 1178 (1252)
+|||||||.+|.+++++|++++|++.+++++||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+
T Consensus 1309 ~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSa 1388 (1466)
T PTZ00265 1309 NMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSS 1388 (1466)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 99999999999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeC----CEEE-EecChhhhhcCCCchhHHHHHHh
Q 000856 1179 LDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQD----GRIV-EQGSHSELVSRPDGAYSRLLQLQ 1248 (1252)
Q Consensus 1179 LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~----G~Iv-e~G~~~eLl~~~~g~y~~l~~~q 1248 (1252)
||++||+.|+++|++.. +++|+|+||||+++++.||+|+||++ |+++ |.|+|+||+++.+|.|++|++.|
T Consensus 1389 LD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1389 LDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred cCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99999999999999884 68999999999999999999999999 9955 89999999984489999999876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-166 Score=1563.43 Aligned_cols=1102 Identities=23% Similarity=0.309 Sum_probs=880.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhh---ccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 109 MYTGERQVSTLRKKYLEAVLKQDVGFFD---TDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 109 ~~~~~~~~~~lR~~~~~~i~~~~~~~~~---~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
.+...++..++|..+...++++.+..-. ++.++|+++|.+++|++++.++. .+++.+|..+.-++++.++-|
T Consensus 263 ~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~-----~~~h~~w~~Plqi~~~l~lLy 337 (1381)
T KOG0054|consen 263 FFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAA-----CFLHLLWSAPLQIILALYLLY 337 (1381)
T ss_pred HHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 3456788888888877777766654322 12368999999999999999975 467778877777777766666
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHH
Q 000856 186 RL----ALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLG 261 (1252)
Q Consensus 186 ~l----~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 261 (1252)
.. +++.++++.+++++..++++++++...+.++..+++.+.++|.++|||+||+|+||+.|.++.++.++++.+..
T Consensus 338 ~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~l 417 (1381)
T KOG0054|consen 338 GLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLL 417 (1381)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 64 45566666677778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 262 YKAGMAKGLGLGCTYGIACMSWALVFWYAGVF-IRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLME 340 (1252)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 340 (1252)
+|.....++...+..++..++.+ +.++.+. ..++.+++..+|+++...-....|+..++..+..+.++.+|.+|+.+
T Consensus 418 rk~~~~~~~~~~~~~~~p~lv~~--~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~ 495 (1381)
T KOG0054|consen 418 RKSAYLSALNSFLNFFSPVLVSV--VTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKE 495 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888877776666655443 4455555 56778999999988765555566888888899999999999999999
Q ss_pred HHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC
Q 000856 341 IIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN 420 (1252)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~ 420 (1252)
++..++. +++.....+..+.+..++++|.+|+|++..+.+.|+||||+|++|+.+|||||.|||||+|+.+|+|+++..
T Consensus 496 fl~~~e~-~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~ 574 (1381)
T KOG0054|consen 496 FLLSEEL-DPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL 574 (1381)
T ss_pred HhcCccc-CccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc
Confidence 9987532 222211112223345699999999998644456999999999999999999999999999999999999999
Q ss_pred CcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCC
Q 000856 421 AGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGER 500 (1252)
Q Consensus 421 ~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 500 (1252)
+|++.++| .++||||+||++++||||||+||.| .+.++++++.+.|++.+|++.+|.|+.|++||+
T Consensus 575 sG~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGEr 640 (1381)
T KOG0054|consen 575 SGSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGER 640 (1381)
T ss_pred cceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCC
Confidence 99999998 5999999999999999999999986 567899999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhH-HHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEE
Q 000856 501 GVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSE-SIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQV 579 (1252)
Q Consensus 501 g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~-~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i 579 (1252)
|.+|||||||||+||||+|+++||++||||+||+|+|+. +.+.++++.+.++||+|+|||+++++++||+|++|+||+|
T Consensus 641 GinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 641 GINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred ccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeE
Confidence 999999999999999999999999999999999999975 5556677777789999999999999999999999999999
Q ss_pred EEecChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccc
Q 000856 580 VETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSN 659 (1252)
Q Consensus 580 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1252)
.+.|+++|+++..+.+.++.................+.. ..+...............+. . ............
T Consensus 721 ~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~ 792 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESG---ESSRESESRSLESLSSEEEK-S----KDEKEEEDKLVQ 792 (1381)
T ss_pred ecccCHHHHHhcchhHHHHhhccchhhcccccccccccc---ccccchhhhhhhhhcccccc-c----ccccchhhHHHH
Confidence 999999999988888877732222111110000000000 00000000000000000000 0 000000000001
Q ss_pred cccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHH
Q 000856 660 AETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGL 739 (1252)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1252)
.++.+.+..++..|++|++... ++....+.++..+....+.....+|++.|.+.-...... ......|..+|..+++
T Consensus 793 ~ee~~~G~v~~~vY~~Y~~a~~-g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~--~~~~~~~~~vY~~l~~ 869 (1381)
T KOG0054|consen 793 EEERETGKVSWSVYKKYIKAAG-GFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT--TVSTSFYLGVYALLGV 869 (1381)
T ss_pred HHHHhcCEeeHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc--CCCcchHHHHHHHHHH
Confidence 1112233334455555555422 222222223333333344444444444443221110000 0245678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 740 YAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLL 819 (1252)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~ 819 (1252)
...++.+++.+.+...+.++++++|++++++++++||+|||. ++.|+|+|||++|++.+|..++..+..++..++.++
T Consensus 870 ~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l 947 (1381)
T KOG0054|consen 870 ASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVL 947 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHH
Q 000856 820 TSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHEL 899 (1252)
Q Consensus 820 ~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 899 (1252)
+.++++.+..|+..++++.+..+++.+..++....++..|-....++|..+|+.|+++|+.|||||+.+++|.+++.+..
T Consensus 948 ~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~ 1027 (1381)
T KOG0054|consen 948 GILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELI 1027 (1381)
T ss_pred HHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHh
Confidence 99999888888765555544444444444444444455555556789999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 900 RVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGES 979 (1252)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 979 (1252)
|.+.+..+-....+.++..-..++..+....+..+.+..-... .+.|.....+.+.......++..+....+.++.+.|
T Consensus 1028 D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~-~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~S 1106 (1381)
T KOG0054|consen 1028 DENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL-ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVS 1106 (1381)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 9999987766666666555555554444333333333322222 667888888889999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCC--CCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHH
Q 000856 980 VGSVFSTLDRSTRIDPDDPD--AEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIAL 1057 (1252)
Q Consensus 980 ~~ri~~~~~~~~~~~~~~~~--~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~l 1057 (1252)
+||+.++.+.++|.+...+. +++.||.+|+|+|+|++.+|..+ .++|||||||+|+||||||||||||||||||+++
T Consensus 1107 VERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~a 1185 (1381)
T KOG0054|consen 1107 VERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILA 1185 (1381)
T ss_pred hhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHH
Confidence 99999999977662221111 35569999999999999999644 3479999999999999999999999999999999
Q ss_pred HhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCc
Q 000856 1058 IERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNA 1137 (1252)
Q Consensus 1058 L~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~g 1137 (1252)
|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||||. .+++|+++|+||++|++.++|.++|+|
T Consensus 1186 LFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~~Lk~~v~~~p~~ 1264 (1381)
T KOG0054|consen 1186 LFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF-DEYSDDEIWEALERCQLKDVVSSLPGG 1264 (1381)
T ss_pred HHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc-cccCHHHHHHHHHHhChHHHHhhCCcC
Confidence 9999999999999999999999999999999999999999999999999985 579999999999999999999999999
Q ss_pred CCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEE
Q 000856 1138 YKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIG 1217 (1252)
Q Consensus 1138 ldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~ 1217 (1252)
||++|.|+|.|||.||||++||||||||+++||+||||||++|++|+..||++|++.|++||||+||||++|+.+||||+
T Consensus 1265 Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVl 1344 (1381)
T KOG0054|consen 1265 LDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVL 1344 (1381)
T ss_pred CCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEEEecChhhhhcCCCchhHHHHHHh
Q 000856 1218 VVQDGRIVEQGSHSELVSRPDGAYSRLLQLQ 1248 (1252)
Q Consensus 1218 vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q 1248 (1252)
|||+|+|+|+|+|++|++++++.|++++..-
T Consensus 1345 Vld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1345 VLDAGRVVEFDSPAELLSDKDSLFSSLLKEA 1375 (1381)
T ss_pred EeeCCeEeecCChHHHHhCCcchHHHHHHHH
Confidence 9999999999999999999899998666543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.9e-155 Score=1548.15 Aligned_cols=1097 Identities=22% Similarity=0.273 Sum_probs=833.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000856 109 MYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLA 188 (1252)
Q Consensus 109 ~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 188 (1252)
..++.++...++..+++|+++++..++++. ++|+++|++++|++++++++. .+..++..++.+++++++++..-...+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~ 443 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVAS 443 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888899999999999998754 799999999999999999874 455555555554444444333211122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 189 LLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAK 268 (1252)
Q Consensus 189 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (1252)
++.++++.+++++..++.+++++..++.++..++..+.+.|.++|+++||+|+||+.+.+++.+.++++.+...+.....
T Consensus 444 l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~ 523 (1622)
T PLN03130 444 LIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLS 523 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333444455677788888888888899999999999999999999999999999999999988888777766665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000856 269 GLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSI 348 (1252)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 348 (1252)
++...+...... .+.++++|++.+.+|.++++.+|+++.+......|+..++..+..+.+++++.+|+.++++.++..
T Consensus 524 ~~~~~~~~~~~~--~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~ 601 (1622)
T PLN03130 524 AFNSFILNSIPV--LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERV 601 (1622)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 554433322221 244567888888999999999998876666667788888888999999999999999999765332
Q ss_pred CCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCC-cEEEEC
Q 000856 349 IQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNA-GHVLLD 427 (1252)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~-G~i~~~ 427 (1252)
.. + .. ...+..+.|+++|++|+|+++++.++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+.
T Consensus 602 ~~-~-~~-~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~ 678 (1622)
T PLN03130 602 LL-P-NP-PLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR 678 (1622)
T ss_pred cc-c-CC-cccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc
Confidence 11 1 11 01111246999999999985444679999999999999999999999999999999999999999 999864
Q ss_pred CccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChH
Q 000856 428 NVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGG 507 (1252)
Q Consensus 428 g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgG 507 (1252)
++|+||+|+||+|++||||||+||.| .++++++++++.|++.++++.+|+|++|.+||+|.+||||
T Consensus 679 -------------~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGG 744 (1622)
T PLN03130 679 -------------GTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGG 744 (1622)
T ss_pred -------------CeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHH
Confidence 48999999999999999999999987 4788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHH-HHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChH
Q 000856 508 QKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQ-EALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 508 qkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~ 586 (1252)
|||||+||||+|++|+|+||||||||||+++++.+. ++++...+++|+|+|||+++.+..||+|++|++|+++++|+++
T Consensus 745 QKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~ 824 (1622)
T PLN03130 745 QKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYE 824 (1622)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHH
Confidence 999999999999999999999999999999987765 5677666799999999999999999999999999999999999
Q ss_pred HHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCC
Q 000856 587 ELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKN 666 (1252)
Q Consensus 587 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1252)
|++++.+.|.++...+....+........... .............. ..+.. ......+.........++++.+
T Consensus 825 eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~e~~~~g 897 (1622)
T PLN03130 825 ELSNNGPLFQKLMENAGKMEEYVEENGEEEDD--QTSSKPVANGNANN----LKKDS-SSKKKSKEGKSVLIKQEERETG 897 (1622)
T ss_pred HHHhcchhHHHHHHhccccccccccccccccc--cccccccccccccc----ccccc-cccccccccchhhhhHHHHhcC
Confidence 99998888888776543211110000000000 00000000000000 00000 0000000000000011112222
Q ss_pred CCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHH
Q 000856 667 PAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYL 746 (1252)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1252)
...+..|++|++.....+ ...+.++..++..++.....++++.+.+... . .......|..+|++++++..++.+
T Consensus 898 ~v~~~vy~~Y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~----~-~~~~~~~~~~i~~~l~~~~~i~~~ 971 (1622)
T PLN03130 898 VVSWKVLERYKNALGGAW-VVMILFLCYVLTEVFRVSSSTWLSEWTDQGT----P-KTHGPLFYNLIYALLSFGQVLVTL 971 (1622)
T ss_pred ccCHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c-CCCchhHHHHHHHHHHHHHHHHHH
Confidence 233444555544432221 2222222222223333333344443332111 0 111234567778888888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 747 IQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAF 826 (1252)
Q Consensus 747 ~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 826 (1252)
++.++..+.+.++++++|.+++++++++|++||++ +++|+++||+++|++.++..++..+..++..++.+++.+++++
T Consensus 972 ~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~ 1049 (1622)
T PLN03130 972 LNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIG 1049 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999985 8899999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHH
Q 000856 827 IVEWRVSLLILGTYPLLVLANF---AQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQ 903 (1252)
Q Consensus 827 ~~~~~l~l~~l~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~ 903 (1252)
+++|...+ +++|+.+++.+ +..+..++..+......++..+++.|+++|+++||+|++++++.+.+.+..+...
T Consensus 1050 ~~~~~~~~---~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~ 1126 (1622)
T PLN03130 1050 IVSTISLW---AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNI 1126 (1622)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 87764333 22333332222 2233334444444556788999999999999999999999988888877777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 904 SQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGV-ST-----FSKVIKVFVVLVVTANSVAETVSLAPEIIRGG 977 (1252)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1252)
+..+.......+......++ ...++++.+...+..+. .+ .+.+..++.+.......+..+.....+.+...
T Consensus 1127 ~~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~ 1203 (1622)
T PLN03130 1127 RFTLVNMSSNRWLAIRLETL---GGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSL 1203 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443333333322222222 12222223333333321 11 22233333444555566667777778889999
Q ss_pred HHHHHHHHHhcccCCCCCC--CCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHH
Q 000856 978 ESVGSVFSTLDRSTRIDPD--DPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVI 1055 (1252)
Q Consensus 978 ~s~~ri~~~~~~~~~~~~~--~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl 1055 (1252)
.+++|+.++++.+++.+.. ....++.||.+|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+
T Consensus 1204 ~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl 1282 (1622)
T PLN03130 1204 NAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSML 1282 (1622)
T ss_pred HHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHH
Confidence 9999999999876554321 11122345677899999999999643 24699999999999999999999999999999
Q ss_pred HHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCC
Q 000856 1056 ALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALP 1135 (1252)
Q Consensus 1056 ~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp 1135 (1252)
++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||+|+. +++|+|+|+|+++++++++|.++|
T Consensus 1283 ~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp 1361 (1622)
T PLN03130 1283 NALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNS 1361 (1622)
T ss_pred HHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCc
Confidence 9999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred CcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCE
Q 000856 1136 NAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDC 1215 (1252)
Q Consensus 1136 ~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~Dr 1215 (1252)
+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||.+||+.|+++|++.+++||+|+||||++|+.+|||
T Consensus 1362 ~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~Dr 1441 (1622)
T PLN03130 1362 LGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDR 1441 (1622)
T ss_pred cccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCEEEEecChhhhhcCCCchhHHHHHHhh
Q 000856 1216 IGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1216 I~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q~ 1249 (1252)
|+|||+|+|+|+|+|+||+++++|.|++|++.+.
T Consensus 1442 IlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1442 ILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred EEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 9999999999999999999876799999998764
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-153 Score=1538.68 Aligned_cols=1093 Identities=21% Similarity=0.273 Sum_probs=830.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000856 109 MYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLA 188 (1252)
Q Consensus 109 ~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 188 (1252)
...+.++...++..+++|+++++..++++. ++|+++|++++|++.+++++ ..+..++..++.++++++++ .+.++
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l---~~~lg 440 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLL---YQQLG 440 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHh
Confidence 466778888888899999999999988754 79999999999999999986 34444444444333333322 22233
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 189 LLSIA---VIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 189 l~~l~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
+.+++ ++.+++++..++.+++++..++.++..++..+.+.|.++|+++||+|+||+.+.+++++.++++.+...+..
T Consensus 441 ~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~ 520 (1495)
T PLN03232 441 VASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQ 520 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32222 222333345667888888888899999999999999999999999999999999999999998888877776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
...++...+..... ..+.++++|++.+.+|.++++.+|+++.+......|+..++..+..+.+++++.+|+.++++.+
T Consensus 521 ~~~~~~~~~~~~~~--~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~ 598 (1495)
T PLN03232 521 LLSAFNSFILNSIP--VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSE 598 (1495)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 66555433322222 2233467888999999999999999877777767788888888999999999999999999865
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 346 PSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
++..... . ......+.|+++|++|+|+++++.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|.+.
T Consensus 599 ~~~~~~~--~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~ 675 (1495)
T PLN03232 599 ERILAQN--P-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV 675 (1495)
T ss_pred ccccccc--C-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE
Confidence 4321111 1 111123469999999999854446799999999999999999999999999999999999999998763
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
.+|++|+||+|+||+|++||||||+||.+ .++++++++++.|++.++++.+|+|++|.+||+|.+||
T Consensus 676 ------------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LS 742 (1495)
T PLN03232 676 ------------VIRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNIS 742 (1495)
T ss_pred ------------EecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccC
Confidence 24568999999999999999999999986 67889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHH-HHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQE-ALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
|||||||+||||+|++|+|+||||||||||+++++++.+ ++....+++|+|+||||++.+..||+|++|++|+++++|+
T Consensus 743 GGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt 822 (1495)
T PLN03232 743 GGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGT 822 (1495)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecC
Confidence 999999999999999999999999999999999887755 5666667999999999999999999999999999999999
Q ss_pred hHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCccccccccccccc
Q 000856 585 HEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDR 664 (1252)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (1252)
|+|++++++.|.++.+.+....+.....+..+.. . .......... ...+.. ......... ....+.++.+
T Consensus 823 ~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~--~~~~~~-~~~~~~~~~-~~~~~~e~~~ 892 (1495)
T PLN03232 823 FAELSKSGSLFKKLMENAGKMDATQEVNTNDENI--L----KLGPTVTIDV--SERNLG-STKQGKRGR-SVLVKQEERE 892 (1495)
T ss_pred HHHHHhcchhHHHHHHhccccccccccccccccc--c----cccccccccc--cccccc-cccccccch-hhhhhHHHHh
Confidence 9999998888888876543211111000000000 0 0000000000 000000 000000000 0001111122
Q ss_pred CCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHH
Q 000856 665 KNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVA 744 (1252)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1252)
.....+..|+++++..+..+ ...+.++..++..++.....++++.|. ..... .......|..+|++++++..++
T Consensus 893 ~g~v~~~vy~~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~wl~~w~----~~~~~-~~~~~~~~l~~y~~l~~~~~~~ 966 (1495)
T PLN03232 893 TGIISWNVLMRYNKAVGGLW-VVMILLVCYLTTEVLRVSSSTWLSIWT----DQSTP-KSYSPGFYIVVYALLGFGQVAV 966 (1495)
T ss_pred cCcccHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHh----cccCC-CCCCcchHHHHHHHHHHHHHHH
Confidence 22333444555554433212 222222222222222222222222221 11110 0112356788899999998899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 745 YLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIV 824 (1252)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~ 824 (1252)
.+++.++..+.+.++++++|++++++++++|++||++ +++|+++||+++|++.++..++..+..++..++.+++.+++
T Consensus 967 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~ 1044 (1495)
T PLN03232 967 TFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFAL 1044 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999984 88999999999999999999999999998888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHh
Q 000856 825 AFIVEWRVSLLILGTYPLLVLANF---AQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRV 901 (1252)
Q Consensus 825 ~~~~~~~l~l~~l~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~ 901 (1252)
++++++...++ ++|+.+++.+ +..+..++..+......++..+++.|+++|+++||+|+.++++.+++.+..+.
T Consensus 1045 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~ 1121 (1495)
T PLN03232 1045 IGTVSTISLWA---IMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDN 1121 (1495)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHH
Confidence 77766533322 2333333222 22233344455556677899999999999999999999999988888777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC----CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 902 PQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVG-KGVS----TFS-KVIKVFVVLVVTANSVAETVSLAPEIIR 975 (1252)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1252)
..+..+.......+....... +...++.+.+...+. .+.+ .++ .+..++.+......++..+...+.+++.
T Consensus 1122 ~~~~~~~~~~~~~wl~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~ 1198 (1495)
T PLN03232 1122 NIRFTLANTSSNRWLTIRLET---LGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAEN 1198 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665554333333222211111 122222233333333 2322 112 2223444555566778888888999999
Q ss_pred HHHHHHHHHHHhcccCCCCCC-C-CCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHH
Q 000856 976 GGESVGSVFSTLDRSTRIDPD-D-PDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSS 1053 (1252)
Q Consensus 976 ~~~s~~ri~~~~~~~~~~~~~-~-~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKST 1053 (1252)
...+++|+.++++.+++.+.. + ...++.||.+|.|+|+||+|+|+++ .++||+|+||+|+|||++||||||||||||
T Consensus 1199 ~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKST 1277 (1495)
T PLN03232 1199 SLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSS 1277 (1495)
T ss_pred HHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHH
Confidence 999999999999876553321 1 1112235667899999999999533 246999999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhh
Q 000856 1054 VIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSA 1133 (1252)
Q Consensus 1054 Ll~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~ 1133 (1252)
|+++|+|+|+|++|+|+|||+|+++++++++|++|++|||||++|+|||||||+|+. +++|+|+|+|++.+++++++++
T Consensus 1278 L~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~ 1356 (1495)
T PLN03232 1278 MLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDR 1356 (1495)
T ss_pred HHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999975 6899999999999999999999
Q ss_pred CCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhcc
Q 000856 1134 LPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGV 1213 (1252)
Q Consensus 1134 lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~ 1213 (1252)
+|+||||++||+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++.+++||+|+||||++++.+|
T Consensus 1357 lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~ 1436 (1495)
T PLN03232 1357 NPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDC 1436 (1495)
T ss_pred CcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChhhhhcCCCchhHHHHHHhhh
Q 000856 1214 DCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1214 DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
|||+|||+|+|+|+|+|+||+++++|.|++|++.+..
T Consensus 1437 DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1437 DKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred CEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 9999999999999999999999866799999987643
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.7e-150 Score=1508.41 Aligned_cols=1160 Identities=20% Similarity=0.233 Sum_probs=876.7
Q ss_pred HHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 49 VIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVL 128 (1252)
Q Consensus 49 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~ 128 (1252)
.+..++.|+ ++..+++.+..+. +. .. .. ..++..++++.++..++.....+.....+.++...++..+|+|++
T Consensus 330 ~~~~~~~P~---ll~~li~~~~~~~-~~-~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L 402 (1522)
T TIGR00957 330 DLMMFIGPQ---ILSLLIRFVNDPM-AP-DW-QG-YFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKAL 402 (1522)
T ss_pred HHHHHHHHH---HHHHHHHHhcCCC-cc-cc-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555 5788887654321 11 10 11 112222223333333333222333456788999999999999999
Q ss_pred cCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 129 KQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYT 208 (1252)
Q Consensus 129 ~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~ 208 (1252)
+++...++.. ++|+++|++++|++++.++. ..+..++..++.+++++++++......+++.++++++++++..++.++
T Consensus 403 ~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~ 480 (1522)
T TIGR00957 403 VITNSARKSS-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMK 480 (1522)
T ss_pred hCChhhcCCC-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988754 78999999999999998855 334444444444343333332222223344455556666777788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 209 LTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFW 288 (1252)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1252)
+++..++.++..++..+.+.|.++||++||+|+||+.+.+++++.++++.+...+..+...+.......... .+.++.
T Consensus 481 ~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 558 (1522)
T TIGR00957 481 TKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPF--LVALIT 558 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999988888776666655443322221111 122334
Q ss_pred HHHHHHH--cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCC-CCcccE
Q 000856 289 YAGVFIR--NGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLD-EVNGNI 365 (1252)
Q Consensus 289 ~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~-~~~~~i 365 (1252)
++.+.+. ++.++++.+|+++.+......|+..++..+..+.++.++.+|+.++++.+++.+ ......... ...+.|
T Consensus 559 f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~-~~~~~~~~~~~~~~~i 637 (1522)
T TIGR00957 559 FAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEP-DSIERRTIKPGEGNSI 637 (1522)
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc-ccccccccCCCCCCcE
Confidence 5556655 357889999987755555567888899999999999999999999998654321 110001111 112369
Q ss_pred EEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceE
Q 000856 366 EFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGL 445 (1252)
Q Consensus 366 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 445 (1252)
+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| +|+|
T Consensus 638 ~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~y 703 (1522)
T TIGR00957 638 TVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------SVAY 703 (1522)
T ss_pred EEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------EEEE
Confidence 999999999743 34689999999999999999999999999999999999999999999997 5999
Q ss_pred EccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000856 446 VNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKIL 525 (1252)
Q Consensus 446 v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~il 525 (1252)
|+|+||+|++||+|||.+|.+ .+.+++.++++.|++.++++.+|+|++|.+|++|.+|||||||||+||||++++|+|+
T Consensus 704 v~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~il 782 (1522)
T TIGR00957 704 VPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIY 782 (1522)
T ss_pred EcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999875 4567788888999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCChHhHHHHHHHHHH---hcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHHH
Q 000856 526 LLDEATSALDAGSESIVQEALDR---LMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 526 llDEpts~LD~~~~~~~~~~l~~---~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 602 (1252)
|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+++++|+++++.++++.|.++...+
T Consensus 783 lLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 862 (1522)
T TIGR00957 783 LFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTY 862 (1522)
T ss_pred EEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhh
Confidence 99999999999999999998854 456899999999999999999999999999999999999998888888877544
Q ss_pred HhhcccCCCCCC---c-ccccccc--ccc--ccc---cccccc---cccccccC---Cc-cc-cCCCCc-c-c-cccccc
Q 000856 603 EMVRNRDFANPS---T-RRSRSTR--LSH--SLS---TKSLSL---RSGSLRNL---SY-SY-STGADG-R-I-EMVSNA 660 (1252)
Q Consensus 603 ~~~~~~~~~~~~---~-~~~~~~~--~~~--~~~---~~~~~~---~~~~~~~~---~~-~~-~~~~~~-~-~-~~~~~~ 660 (1252)
.........+.. . .....+. .+. ... ...... ........ .. +. ...... . . ......
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1522)
T TIGR00957 863 APDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEA 942 (1522)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHH
Confidence 221111000000 0 0000000 000 000 000000 00000000 00 00 000000 0 0 000001
Q ss_pred ccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHH
Q 000856 661 ETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLY 740 (1252)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1252)
++.+.+...+..|+.|++..+ +...++.++..++..++.....++++.+.+.... .........|..+|++++++
T Consensus 943 e~~~~g~v~~~~y~~Y~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~---~~~~~~~~~~~~iy~~l~i~ 1017 (1522)
T TIGR00957 943 DKAQTGQVELSVYWDYMKAIG--LFITFLSIFLFVCNHVSALASNYWLSLWTDDPMV---NGTQNNTSLRLSVYGALGIL 1017 (1522)
T ss_pred HHHhcCcccHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cCCCCCcchHHHHHHHHHHH
Confidence 111112223444555554432 2222222222223333333444444444331110 00011123466688888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 741 AVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLT 820 (1252)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~ 820 (1252)
..++.++..++..+.+.++++++|++++++++++|++||+. +++|+++||+++|++.++..++..+..++..++.+++
T Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~ 1095 (1522)
T TIGR00957 1018 QGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIG 1095 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999985 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHH
Q 000856 821 SFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELR 900 (1252)
Q Consensus 821 ~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~ 900 (1252)
.++++++.+|++++++++++++++++..++.+..+...+......++..+++.|+++|+++||+|++++++.+++.+..+
T Consensus 1096 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~ 1175 (1522)
T TIGR00957 1096 ALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVD 1175 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHH
Confidence 98888888887666655555554444444444555555556667789999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 901 VPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVG-KGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGES 979 (1252)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 979 (1252)
...+..+.......++.....++.. .++++++...+. .+.++.|.+.+++.+......++..+...+.+++....+
T Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s 1252 (1522)
T TIGR00957 1176 ENQKAYYPSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVA 1252 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877666665555544443322 233444444443 578999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCC--CCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHH
Q 000856 980 VGSVFSTLDRSTRIDP--DDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIAL 1057 (1252)
Q Consensus 980 ~~ri~~~~~~~~~~~~--~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~l 1057 (1252)
++|+.++++.+++.+. +....++.||.+|.|+|+||+|+|+++. ++||+|+||+|+|||++|||||||||||||+++
T Consensus 1253 ~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~l 1331 (1522)
T TIGR00957 1253 VERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLG 1331 (1522)
T ss_pred HHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 9999999976654321 1111223456778999999999997542 369999999999999999999999999999999
Q ss_pred HhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCc
Q 000856 1058 IERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNA 1137 (1252)
Q Consensus 1058 L~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~g 1137 (1252)
|+|+|+|++|+|+|||+||++++++++|++|++|||||++|+||||+||++.. +++|||+|+|++.++++++|.++|+|
T Consensus 1332 L~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~G 1410 (1522)
T TIGR00957 1332 LFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDK 1410 (1522)
T ss_pred HhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccC
Confidence 99999999999999999999999999999999999999999999999999754 69999999999999999999999999
Q ss_pred CCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEE
Q 000856 1138 YKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIG 1217 (1252)
Q Consensus 1138 ldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~ 1217 (1252)
|||+|||+|.+||||||||+||||||+++|+|||||||||+||.+||+.|+++|++.+++||||+||||++++.+||||+
T Consensus 1411 Ldt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIl 1490 (1522)
T TIGR00957 1411 LDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVI 1490 (1522)
T ss_pred CCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEEEecChhhhhcCCCchhHHHHHHh
Q 000856 1218 VVQDGRIVEQGSHSELVSRPDGAYSRLLQLQ 1248 (1252)
Q Consensus 1218 vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q 1248 (1252)
|||+|+|+|+|+|+||+++ +|.|++|++..
T Consensus 1491 Vld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1491 VLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred EEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 9999999999999999997 79999999863
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.8e-144 Score=1443.43 Aligned_cols=1126 Identities=18% Similarity=0.220 Sum_probs=853.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhc-cCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000856 94 GLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDT-DARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLST 172 (1252)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~-~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~ 172 (1252)
.++..++.....+.....+.++...++..+|+|+++++...+.+ +.++|+++|++++|++++.+++. .+..++...+.
T Consensus 295 ~~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~-~~~~l~~~Pl~ 373 (1560)
T PTZ00243 295 QLIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQ-YCMYLWSSPMV 373 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHH
Confidence 33444444444455566677788888888999999988876642 23689999999999999999974 45566666666
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHH
Q 000856 173 FLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSD 252 (1252)
Q Consensus 173 ~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~ 252 (1252)
+++++++++.+..+.+++.++++++++++..++.+++.+..++..+..++..+.+.|.++|||+||.++||+.+.+++++
T Consensus 374 li~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~ 453 (1560)
T PTZ00243 374 LLLSILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIED 453 (1560)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666665555777777777788888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 253 AIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGK 332 (1252)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 332 (1252)
.++++.+...+......+...+.+....++ .++.++++.+.++.++++.+|+++.+......|+..++..+..+.++.
T Consensus 454 ~R~~El~~l~~~~~~~~~~~~~~~~~p~l~--~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~ 531 (1560)
T PTZ00243 454 KRARELRYLRDVQLARVATSFVNNATPTLM--IAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFL 531 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887777777666555444443333 233566788889999999999998777777778988999999999999
Q ss_pred HHHHHHHHHHccCCCCCC---C--C-------C-C--C-----C------------------------------------
Q 000856 333 AAGYKLMEIIKQKPSIIQ---D--P-------T-N--G-----R------------------------------------ 356 (1252)
Q Consensus 333 ~s~~ri~~~l~~~~~~~~---~--~-------~-~--~-----~------------------------------------ 356 (1252)
+|++||.++++.++.... + . . . . .
T Consensus 532 vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (1560)
T PTZ00243 532 VSIKRISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCR 611 (1560)
T ss_pred HHHHHHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 999999999976431000 0 0 0 0 0 0
Q ss_pred -cCCCCcccEEEEeEEEECCCC-------------------------------------CCCccccceeEEeeCCCEEEE
Q 000856 357 -CLDEVNGNIEFKNVTFSYPSR-------------------------------------PDVIIFRDFSIFFPAGKTVAV 398 (1252)
Q Consensus 357 -~~~~~~~~i~~~~v~~~y~~~-------------------------------------~~~~~l~~i~l~i~~g~~~~i 398 (1252)
......+.+.++|++++++.. .+.++|+|+||+|++|++++|
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~I 691 (1560)
T PTZ00243 612 PTKRHPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVV 691 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEE
Confidence 000011246777777765310 123589999999999999999
Q ss_pred EcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHH
Q 000856 399 VGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAAS 478 (1252)
Q Consensus 399 vG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~ 478 (1252)
+||||||||||+++|+|+++|++|+|.++ ++|+||+|+||++++||+|||.++.+ .+.+++.++++
T Consensus 692 iG~nGsGKSTLL~~i~G~~~~~~G~i~~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~-~~~~~~~~~~~ 757 (1560)
T PTZ00243 692 LGATGSGKSTLLQSLLSQFEISEGRVWAE-------------RSIAYVPQQAWIMNATVRGNILFFDE-EDAARLADAVR 757 (1560)
T ss_pred ECCCCCcHHHHHHHHhcCCCCCCcEEEEC-------------CeEEEEeCCCccCCCcHHHHHHcCCh-hhHHHHHHHHH
Confidence 99999999999999999999999999874 37999999999999999999999865 34556778888
Q ss_pred HhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHH-HHHhcCCCeEEE
Q 000856 479 AANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEA-LDRLMVGRTTVV 557 (1252)
Q Consensus 479 ~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~-l~~~~~~~tvi~ 557 (1252)
.|++.++++.+|+|++|.+|++|.+|||||||||+||||++.+|+++|||||||+||+++++.+.+. +....+|+|+|+
T Consensus 758 ~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIl 837 (1560)
T PTZ00243 758 VSQLEADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVL 837 (1560)
T ss_pred HhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 8999999999999999999999999999999999999999999999999999999999988777654 444456899999
Q ss_pred EccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHHHHhhcccCCCCCCccccccccccccccccccccccc
Q 000856 558 VAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSG 637 (1252)
Q Consensus 558 itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1252)
+||+++.+..||+|++|++|+++++|+++++.+. +.|..+........+........+........ ............
T Consensus 838 vTH~~~~~~~ad~ii~l~~G~i~~~G~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 915 (1560)
T PTZ00243 838 ATHQVHVVPRADYVVALGDGRVEFSGSSADFMRT-SLYATLAAELKENKDSKEGDADAEVAEVDAAP-GGAVDHEPPVAK 915 (1560)
T ss_pred EeCCHHHHHhCCEEEEEECCEEEEecCHHHHHhC-hHHHHHHHhhcccccccccccccccccccccc-cccccccccccc
Confidence 9999999999999999999999999999999875 34655544321111100000000000000000 000000000000
Q ss_pred ccccCCccccCCCCcccccccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000856 638 SLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYY 717 (1252)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1252)
.............+.........+++.....++..|++|++..+.. .+.+..++..++..++.....++++.+..
T Consensus 916 ~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~-~~~~~~l~~~~~~~~~~~~~~~wl~~w~~---- 990 (1560)
T PTZ00243 916 QEGNAEGGDGAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGL-HAAGFVLATFAVTELVTVSSGVWLSMWST---- 990 (1560)
T ss_pred cccccccccccccccccchhhhHHHHhcCcccHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 0000000000000000000001111122233444555555543321 11111111112222222222233332221
Q ss_pred cCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcH
Q 000856 718 RNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDA 797 (1252)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~ 797 (1252)
+. .......|+.+|+++.++.++..+++.+.....+.+..+++|++++++++++|++|||+ ++.|+++||+++|+
T Consensus 991 -~~--~~~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di 1065 (1560)
T PTZ00243 991 -RS--FKLSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDI 1065 (1560)
T ss_pred -cc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhH
Confidence 11 11112346667777766666666667677777778888999999999999999999985 78999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 000856 798 ADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVS 877 (1252)
Q Consensus 798 ~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~ 877 (1252)
+.++..++..+..++..++.+++.++++++.+|.+.++++.++.+++.+...+.+..++..+......++..+++.|+++
T Consensus 1066 ~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~ 1145 (1560)
T PTZ00243 1066 DILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQ 1145 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHc
Confidence 99999999999999999999999888888888754433322222222222333444445555556677899999999999
Q ss_pred cHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCHHHHHHHHHH
Q 000856 878 NIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLV--GKGVSTFSKVIKVFVV 955 (1252)
Q Consensus 878 gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv--~~g~~~~~~~~~~~~~ 955 (1252)
|+++||+|+.++.+.+++.+..+...+..+.......+......++..+...++.++++... ..+.++.|.+..++.+
T Consensus 1146 G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~ 1225 (1560)
T PTZ00243 1146 GSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTM 1225 (1560)
T ss_pred CHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 99999999999999999999999998888777666666666666665555555555554433 3445788888788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC-CC------------------------CCC-C---CCCCCc
Q 000856 956 LVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRID-PD------------------------DPD-A---EPVETI 1006 (1252)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~-~~------------------------~~~-~---~~~~~~ 1006 (1252)
......++..++..+.+++..+.+++|+.++++..++++ +. ++. . .+.++.
T Consensus 1226 a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1305 (1560)
T PTZ00243 1226 AMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQ 1305 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCC
Confidence 888889999999999999999999999999986433211 00 000 0 012234
Q ss_pred cccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhc
Q 000856 1007 RGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRL 1086 (1252)
Q Consensus 1007 ~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~ 1086 (1252)
.|.|+|+||+|+|++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|+
T Consensus 1306 ~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~ 1384 (1560)
T PTZ00243 1306 AGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRR 1384 (1560)
T ss_pred CCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHh
Confidence 6889999999999643 346999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1087 KIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
+|++|||||+||+||||+||+++ .+++|+|+|+|++.+++++++.++|+||||++||+|.+|||||||||||||||+++
T Consensus 1385 ~I~iVpQdp~LF~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~ 1463 (1560)
T PTZ00243 1385 QFSMIPQDPVLFDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKK 1463 (1560)
T ss_pred cceEECCCCccccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999986 47899999999999999999999999999999999999999999999999999996
Q ss_pred -CCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHH
Q 000856 1167 -PAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1167 -p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~ 1245 (1252)
|+|||||||||+||++||+.|++.|++.+++||||+||||++++.+||+|+||++|+|+|+|+|+||+++++|.|++|+
T Consensus 1464 ~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~ 1543 (1560)
T PTZ00243 1464 GSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMV 1543 (1560)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999987789999999
Q ss_pred HHhhh
Q 000856 1246 QLQHH 1250 (1252)
Q Consensus 1246 ~~q~~ 1250 (1252)
+.+..
T Consensus 1544 ~~~~~ 1548 (1560)
T PTZ00243 1544 EALGR 1548 (1560)
T ss_pred HHhCh
Confidence 87643
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.2e-142 Score=1424.84 Aligned_cols=1161 Identities=18% Similarity=0.232 Sum_probs=850.5
Q ss_pred HHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 49 VIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVL 128 (1252)
Q Consensus 49 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~ 128 (1252)
.+..++.|+ ++..+++.+..+.. .. ......+++.++++.++..++.....+.....+.++...+...+|+|++
T Consensus 93 ~~~~~~~P~---ll~~li~~~~~~~~-~~--~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 93 EATKAVQPL---LLGRIIASYDPFNA-PE--REIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHH---HHHHHHHHhccCCC-Cc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555 57888877532211 10 0111123333333344444444444555556677777777777899999
Q ss_pred cCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 129 KQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYT 208 (1252)
Q Consensus 129 ~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~ 208 (1252)
+++...+++ .++|+++|++++|++++.+++... ..++...+.+++++++++......+++.++++++++++..+++++
T Consensus 167 ~l~~~~~~~-~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDK-ISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcC-CCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998875 478999999999999999976543 334444444455555555555556777778888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 209 LTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFW 288 (1252)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1252)
+.+..++.++..++..+.+.|.++|||+||+|+||+.+.+++++.++++.+...+......+...+..+.. ..+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSG--FFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 99999999999999999999999999999999999999999999999988887777666544333332222 2334556
Q ss_pred HHHHHHHcCccCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEE
Q 000856 289 YAGVFIRNGVTDGGKAFTAIFSAIVGGMSL-GQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEF 367 (1252)
Q Consensus 289 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 367 (1252)
++++.+.++ ++++.+|+++.+......++ ..++..+..+.++.++.+||.+++..++.. .... ......+++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~-~~~~-----~~~~~~i~~ 395 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYK-TLEY-----NLTTTEVEM 395 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cccc-----cCCCCceEE
Confidence 667766654 57888888765544444455 357777888999999999999999865321 1110 011235899
Q ss_pred EeEEEECCCCC-------------------------------CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcc
Q 000856 368 KNVTFSYPSRP-------------------------------DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERF 416 (1252)
Q Consensus 368 ~~v~~~y~~~~-------------------------------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~ 416 (1252)
+|++|.|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999995310 13589999999999999999999999999999999999
Q ss_pred cCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCcccc
Q 000856 417 YDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQ 496 (1252)
Q Consensus 417 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 496 (1252)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.+++.++++.|++.++++.+|.|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 5999999999999999999999865 44566777888889999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHH-HHHHhcCCCeEEEEccCccchhccCEEEEEe
Q 000856 497 VGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQE-ALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQ 575 (1252)
Q Consensus 497 ~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 575 (1252)
+|++|.+|||||||||+||||++++|+++|||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 4677777999999999999998899999999
Q ss_pred CCEEEEecChHHHHhcccchHHHHHHHHhhc----cc--------------C--------C-C------CCCccccccc-
Q 000856 576 QGQVVETGTHEELIAKAGAYASLIRFQEMVR----NR--------------D--------F-A------NPSTRRSRST- 621 (1252)
Q Consensus 576 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~----~~--------------~--------~-~------~~~~~~~~~~- 621 (1252)
+|++++.|+++++.+.++.|........... +. . . . .+..+.....
T Consensus 622 ~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRK 701 (1490)
T ss_pred CCEEEEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999887666655543110000 00 0 0 0 0000000000
Q ss_pred -------cc------------------c-c-ccccccc--------------ccccccc-----c----cCC------cc
Q 000856 622 -------RL------------------S-H-SLSTKSL--------------SLRSGSL-----R----NLS------YS 645 (1252)
Q Consensus 622 -------~~------------------~-~-~~~~~~~--------------~~~~~~~-----~----~~~------~~ 645 (1252)
.. . . ....... ....... + +.. ..
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1490)
T TIGR01271 702 QSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTH 781 (1490)
T ss_pred ccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccc
Confidence 00 0 0 0000000 0000000 0 000 00
Q ss_pred ccCC-----------------------------------CCcccc-c-----------ccccccccCCCCCchHHHHHHH
Q 000856 646 YSTG-----------------------------------ADGRIE-M-----------VSNAETDRKNPAPDGYFLRLLK 678 (1252)
Q Consensus 646 ~~~~-----------------------------------~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~ 678 (1252)
.... .+...+ . ..+.++...+...+..|++|++
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~ 861 (1490)
T TIGR01271 782 SNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYIT 861 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHH
Confidence 0000 000000 0 0000001111223344555554
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-cCCchh-----------hhhhHHH-HHHHHHHHHHHHH
Q 000856 679 LNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVF--YY-RNPASM-----------ERKTKEF-VFIYIGAGLYAVV 743 (1252)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~ 743 (1252)
..+ .+.++++.+++.++..++.....+|+..+.... +. ...... .....+| +.+|+++++...+
T Consensus 862 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1490)
T TIGR01271 862 TNR-NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLA 940 (1490)
T ss_pred hcC-cHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHH
Confidence 432 222222222222233333333333333222100 00 000000 0011222 3445555555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 744 AYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFI 823 (1252)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i 823 (1252)
+.+++.++..+.+.+++.++|.+++++++++|++||++ +++|+++||+++|++.++..++..+..++..++.+++.++
T Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~ 1018 (1490)
T TIGR01271 941 LGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIF 1018 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888899999999999999999999999999985 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHH
Q 000856 824 VAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQ 903 (1252)
Q Consensus 824 ~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~ 903 (1252)
++++++|+++++++.++.+++++..++.+..++..+......++..+++.|+++|+.+||+|++++++.+++.+..+...
T Consensus 1019 ~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~ 1098 (1490)
T TIGR01271 1019 VVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHT 1098 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 88888887655433333333333333334444555555667789999999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 904 SQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSV 983 (1252)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 983 (1252)
+..+.......++.....++..+...++..+ .+....++.|.+..++.+......++..++..+.++...+.+++|+
T Consensus 1099 ~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l---~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi 1175 (1490)
T TIGR01271 1099 ANWFLYLSTLRWFQMRIDIIFVFFFIAVTFI---AIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRV 1175 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655544444444333333222211111111 1111233444555555566666777888888888999999999999
Q ss_pred HHHhcccCCCCCC-C---------------CCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCC
Q 000856 984 FSTLDRSTRIDPD-D---------------PDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGAS 1047 (1252)
Q Consensus 984 ~~~~~~~~~~~~~-~---------------~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~S 1047 (1252)
.++++.+++.... + +..++.||..|.|+|+||+|+|++. .+++|+|+||+|+|||+|||||||
T Consensus 1176 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrS 1254 (1490)
T TIGR01271 1176 FKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRT 1254 (1490)
T ss_pred HHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCC
Confidence 9999765543211 0 0112236777899999999999743 357999999999999999999999
Q ss_pred CCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCc
Q 000856 1048 GSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANV 1127 (1252)
Q Consensus 1048 GSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l 1127 (1252)
|||||||+++|+|+++ ++|+|+|||+||++++++++|++|++|||||++|+||||+||+++. .++|+++|+|++.+++
T Consensus 1255 GsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL~~~~L 1332 (1490)
T TIGR01271 1255 GSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVAEEVGL 1332 (1490)
T ss_pred CCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHHHHCCC
Confidence 9999999999999997 7999999999999999999999999999999999999999999864 6899999999999999
Q ss_pred hhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCc
Q 000856 1128 HGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRL 1207 (1252)
Q Consensus 1128 ~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl 1207 (1252)
++++.++|+||||+|+|+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++.+++||||+||||+
T Consensus 1333 ~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl 1412 (1490)
T TIGR01271 1333 KSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRV 1412 (1490)
T ss_pred HHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHHhhh
Q 000856 1208 STIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1208 ~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
+++.+||||+||++|+|+|+|+|++|+++ +|.|++|++.+.+
T Consensus 1413 ~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1413 EALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhCh
Confidence 99999999999999999999999999985 8999999987644
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-105 Score=929.83 Aligned_cols=574 Identities=38% Similarity=0.611 Sum_probs=543.7
Q ss_pred hHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 671 GYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHY 750 (1252)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1252)
..+++++.+.++.|+++..+.++.++........|.+.+.+++.+...... .........++.++.+..+++.+++.+
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~--~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDS--ADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999999999999888999999999999888761111 222334566677777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 751 FFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEW 830 (1252)
Q Consensus 751 ~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 830 (1252)
++.+.+.++..++|.++|+++++++++|||. +.+|++++|++.|...+.+.++.++...+.+++..++++++|++.+|
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 9999999999999999999999999999996 67999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHH
Q 000856 831 RVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRS 910 (1252)
Q Consensus 831 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1252)
.++++.++.+|++.++..++.++.++.+++.+..-+..+....|.+++++|||+|+.|+...++|.+..++..+...|..
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000856 911 LTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRS 990 (1252)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~ 990 (1252)
...++++....+...+....++++|.+++..|.++.|++..+++|......++..+.+.+.+++++..+.+|+++++|.+
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEE
Q 000856 991 TRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVM 1070 (1252)
Q Consensus 991 ~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~ 1070 (1252)
|..++. ....|. ..+|.|+|+||+|+||.+|+.+||+|+||+|+|||+||+||||||||||++++|.|||+|++|+|+
T Consensus 449 P~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Il 526 (716)
T KOG0058|consen 449 PRIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRIL 526 (716)
T ss_pred CCCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 887655 322332 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1071 IDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1071 idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
+||+||++++++.||++||+|.|||.||++||+|||.||.+++++||+.+|+++++.||||..+|+||||.|||+|..||
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLS 606 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLS 606 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~ 1230 (1252)
|||||||||||||+|||+||||||||||||.++|..++++|.+..+++|||+||||++|++.+|+|+|+++|+|+|.|+|
T Consensus 607 GGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h 686 (716)
T KOG0058|consen 607 GGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTH 686 (716)
T ss_pred chHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCchhHHHHHHhhh
Q 000856 1231 SELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1231 ~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
+|||++++|.|++|++.|.-
T Consensus 687 ~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 687 DELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred HHHhhCcccHHHHHHHHhcc
Confidence 99999988999999999854
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-101 Score=900.41 Aligned_cols=573 Identities=38% Similarity=0.614 Sum_probs=531.7
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYA 103 (1252)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1252)
..+++++.|.++..| .+..+.++.++........+.+.|+++|.+.... +. ...+......+.++.++.++++++
T Consensus 133 ~~~~rl~~l~~~~~~-~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~-~~---~~~~~~~~~~l~~l~~~~a~~~~~ 207 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWK-WLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD-DS---ADALKRACTILLGLFLIGALANAI 207 (716)
T ss_pred hHHHHHHHHhchhHH-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc-ch---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999887644 5666666666666555555667899999876511 11 223344566677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 104 EIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS 183 (1252)
Q Consensus 104 ~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 183 (1252)
+.+++.++++++..++|.++|+++++++++|||.+ ++||++||+++|++.+.+.++..+...+.+++..++++++|+++
T Consensus 208 r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~ 286 (716)
T KOG0058|consen 208 RGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSL 286 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhh
Confidence 99999999999999999999999999999999976 79999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Q 000856 184 AWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYK 263 (1252)
Q Consensus 184 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 263 (1252)
||+|+++.++.+|+++++..+++++.++.+++.|++.++++....|.+++|||||+|+.|+.+.+||.+..++..+...|
T Consensus 287 S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k 366 (716)
T KOG0058|consen 287 SWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKK 366 (716)
T ss_pred hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000856 264 AGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 343 (1252)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 343 (1252)
.+...+..+....+..++..+.+++||++++.+|.++.|.+.+++++......++..+...+..++++..|.+|++|+++
T Consensus 367 ~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~d 446 (716)
T KOG0058|consen 367 EAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMD 446 (716)
T ss_pred HHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhc
Confidence 99988988888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcE
Q 000856 344 QKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGH 423 (1252)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 423 (1252)
.+|..+.+. ...+....+.|+|+||+|+||++++.++|+|+||+|+|||+||+||||||||||++++|.++|+|++|+
T Consensus 447 r~P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~ 524 (716)
T KOG0058|consen 447 RKPRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGR 524 (716)
T ss_pred cCCCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 999876541 112225678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCC
Q 000856 424 VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQ 503 (1252)
Q Consensus 424 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 503 (1252)
|.+||+|++++++.++|++||+|.|||.||++||+|||.||.++.+++++..+++.+++|+||..+|+||+|.+||+|.+
T Consensus 525 IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~q 604 (716)
T KOG0058|consen 525 ILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQ 604 (716)
T ss_pred EEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEec
Q 000856 504 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 504 LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
|||||||||||||||++||.||||||+|||||+++|..++++|.++.+++|||+|+||++++++||+|+|+++|+++|.|
T Consensus 605 LSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G 684 (716)
T KOG0058|consen 605 LSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMG 684 (716)
T ss_pred ccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhcc-cchHHHHHHHHh
Q 000856 584 THEELIAKA-GAYASLIRFQEM 604 (1252)
Q Consensus 584 ~~~~l~~~~-~~~~~~~~~~~~ 604 (1252)
+|+|++++. |.|+++.+.|..
T Consensus 685 ~h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 685 THDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred cHHHHhhCcccHHHHHHHHhcc
Confidence 999999988 899999887754
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-98 Score=920.53 Aligned_cols=579 Identities=44% Similarity=0.756 Sum_probs=546.3
Q ss_pred CCchHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000856 22 QSLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSS 101 (1252)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1252)
.+.++++++++.+| .|.++++|++++++.|..+|+++++++.++..|...+ ++........|++++++++++.+++.
T Consensus 648 ~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~--~~~~~~~~~~~al~f~~l~~~~~i~~ 724 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPD--DDELKREVRAWALIFLGLGIVSGITN 724 (1228)
T ss_pred ccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999877 5888999999999999999999999999999987543 22233334459999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 102 YAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF 181 (1252)
Q Consensus 102 ~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 181 (1252)
+++.+++.+.++++..|+|...|+++++++.+|||...++|.+.+|+.+|...++..+.+.+..++.++..++++++++|
T Consensus 725 ~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf 804 (1228)
T KOG0055|consen 725 FLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAF 804 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999655559999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHH
Q 000856 182 VSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLG 261 (1252)
Q Consensus 182 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 261 (1252)
+++|+|+++++++.|++.+..+...+.+.....+..+...+.+++..|++.|||||++|+.|+++.+.|.+..++..+..
T Consensus 805 ~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~ 884 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSS 884 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 262 YKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEI 341 (1252)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 341 (1252)
.|.+.+.++.+++.+.+.++++++.+|||++++.+|.+++.++|..++.+.+....+.+.....+.+.+++.|+.+++++
T Consensus 885 ~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i 964 (1228)
T KOG0055|consen 885 FKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI 964 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888888889999999999999999999999
Q ss_pred HccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCC
Q 000856 342 IKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNA 421 (1252)
Q Consensus 342 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~ 421 (1252)
++++|.++.+++.+...++..|+|+++||+|+||++|+.++|+|+||+|++|+.+||||||||||||++.+|.|+|+|++
T Consensus 965 ~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~ 1044 (1228)
T KOG0055|consen 965 LDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDA 1044 (1228)
T ss_pred hcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 99998766544333334556789999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCC
Q 000856 422 GHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERG 501 (1252)
Q Consensus 422 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 501 (1252)
|.|.+||+|+++++++++|+++|.|.|||.||++||||||+||....+.+++.+|++.+++|+|+..||+||||.+||+|
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG 1124 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERG 1124 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCccc
Confidence 99999999999999999999999999999999999999999996568999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEE
Q 000856 502 VQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVE 581 (1252)
Q Consensus 502 ~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~ 581 (1252)
.+||||||||||||||+++||+||||||+|||||.++++.++++|++.+.|+|+|+|+||++++++||.|+|+++|+|+|
T Consensus 1125 ~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE 1204 (1228)
T KOG0055|consen 1125 VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVE 1204 (1228)
T ss_pred CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChHHHHhcccchHHHHHHHH
Q 000856 582 TGTHEELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 582 ~g~~~~l~~~~~~~~~~~~~~~ 603 (1252)
+|+|++|++++|.|.++...|.
T Consensus 1205 ~GtH~~L~~~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1205 QGTHDELLAKRGIYFRLVQLQS 1226 (1228)
T ss_pred cccHHHHHhCCCchHHHhhhcc
Confidence 9999999999999999987653
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9e-93 Score=867.60 Aligned_cols=567 Identities=31% Similarity=0.500 Sum_probs=524.7
Q ss_pred HHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 674 LRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFS 753 (1252)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1252)
.+++....+.++.+.-.++.+++.+++..+.+++...++|.+..... ........+.++.++++..++.+++.++..
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445556666666677777777788888888888887765432 222334455666677788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 754 IMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVS 833 (1252)
Q Consensus 754 ~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 833 (1252)
..+.++...+-.++++|++++|++||. +++.|++++|+ +|++.++++++..+...+.+++.+++.++++++++|+++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~--~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~ 296 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFE--KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLT 296 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHcc--CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999996 48999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000856 834 LLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTA 913 (1252)
Q Consensus 834 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1252)
+++++.+|++++..++..+.+++..++.....+..++.+.|++.|++|||+.+.|.++..+|++.+.++.+...+.....
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~ 376 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLA 376 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000856 914 GILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRI 993 (1252)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 993 (1252)
.....+..++..+..++++|+|+.+|..|.+|+|+++++.++...+..|+..+++.+.++++...+.+|+.++++.++|.
T Consensus 377 ~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~ 456 (709)
T COG2274 377 LILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQ 456 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988775
Q ss_pred CCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECC
Q 000856 994 DPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDG 1073 (1252)
Q Consensus 994 ~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG 1073 (1252)
+.+.. ....++..|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||
T Consensus 457 ~~~~~-~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg 534 (709)
T COG2274 457 EGDKT-LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDG 534 (709)
T ss_pred ccccc-cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 44332 22345678999999999999754 34799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1074 KDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1074 ~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
+|+++++++++|++|+|||||+++|+|||||||++++|+.++||+++|++.+|+++||.++|.||||++||+|.+|||||
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQ 614 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQ 614 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||||+|||||++||+||||||||||||++||+.|.+.|.+..++||+|+||||+++++.||||+|||+|||+|+|+|+||
T Consensus 615 rQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~el 694 (709)
T COG2274 615 RQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEEL 694 (709)
T ss_pred HHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHhh
Q 000856 1234 VSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1234 l~~~~g~y~~l~~~q~ 1249 (1252)
++. +|.|+++++.|.
T Consensus 695 l~~-~g~y~~l~~~q~ 709 (709)
T COG2274 695 LAQ-GGLYARLYQQQE 709 (709)
T ss_pred HHh-cChHHHHHhccC
Confidence 998 999999998873
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.3e-87 Score=816.17 Aligned_cols=568 Identities=32% Similarity=0.469 Sum_probs=516.5
Q ss_pred CchHHHHHHhhchhhHH--HHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000856 23 SLPFFQLFSFADKYDWC--LMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFS 100 (1252)
Q Consensus 23 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (1252)
+..+.+++....++++. .+++..++..+.+++.|++ +..++|.+.... + .+.+...++.+++.+++.+++
T Consensus 139 ~~~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~---~q~viD~Vl~~~-~----~~tL~vl~ig~~~~~l~~~~l 210 (709)
T COG2274 139 PFGLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLF---SQIVIDKVLPDA-S----RSTLTVLAIGLLLAALFEALL 210 (709)
T ss_pred ccchHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhhccC-c----hhHHHHHHHHHHHHHHHHHHH
Confidence 33456666666665443 2334444555566667764 677888876543 1 234455666777788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 101 SYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVG 180 (1252)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 180 (1252)
.+++.+...+.+.|+..++-.++++|++++|++||+++ ++|++++|+. |.++|+++++..+...+..+..+++.++++
T Consensus 211 ~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm 288 (709)
T COG2274 211 RLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVM 288 (709)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999865 8999999985 999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHH
Q 000856 181 FVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKL 260 (1252)
Q Consensus 181 ~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~ 260 (1252)
++++|.|+++.++.+|+.+++..++.+.+++..++..+..++.++...|++.|+++||+.+.|.++..+|++...+..+.
T Consensus 289 ~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~ 368 (709)
T COG2274 289 FLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNI 368 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 261 GYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLME 340 (1252)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 340 (1252)
.++..+..........++..++.++++|+|+++|.+|.+|.|.++++.+.......|+..+...+..+++++.+.+|+.+
T Consensus 369 ~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~d 448 (709)
T COG2274 369 GFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGD 448 (709)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888889999999999999999999999999999998887778788999999999999999999999999
Q ss_pred HHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC
Q 000856 341 IIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN 420 (1252)
Q Consensus 341 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~ 420 (1252)
+++.++|.+.+.. ....+...++|+++||+|+|+..+ .++|+|+||+|++||++||||+||||||||+|+|.|+|+|+
T Consensus 449 il~~~~E~~~~~~-~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~ 526 (709)
T COG2274 449 ILDTPPEQEGDKT-LIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ 526 (709)
T ss_pred HhcCCcccccccc-cccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 9999877543221 223345578899999999998653 47999999999999999999999999999999999999999
Q ss_pred CcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCC
Q 000856 421 AGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGER 500 (1252)
Q Consensus 421 ~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 500 (1252)
+|+|++||.|++++++..+|++|+||+||+.||+|||+|||.++.|+.+++++.++|+.+++++++..+|.||+|.+||+
T Consensus 527 ~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~ 606 (709)
T COG2274 527 QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEG 606 (709)
T ss_pred CceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEE
Q 000856 501 GVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVV 580 (1252)
Q Consensus 501 g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 580 (1252)
|.+||||||||++|||||+++|+||||||||||||+++++.+.+.|.+...|+|+|+||||++++++||||+||++|+|+
T Consensus 607 G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv 686 (709)
T COG2274 607 GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIV 686 (709)
T ss_pred CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChHHHHhcccchHHHHHHH
Q 000856 581 ETGTHEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 581 ~~g~~~~l~~~~~~~~~~~~~~ 602 (1252)
++|+|+|+++..|.|++++..|
T Consensus 687 ~~gs~~ell~~~g~y~~l~~~q 708 (709)
T COG2274 687 EQGSHEELLAQGGLYARLYQQQ 708 (709)
T ss_pred ccCCHHHHHHhcChHHHHHhcc
Confidence 9999999999999999988654
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-84 Score=808.45 Aligned_cols=554 Identities=34% Similarity=0.559 Sum_probs=495.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 683 EWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTR 762 (1252)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1252)
.+ .+..+.++.++...+....+.++...++... ........+...++++.++..++.+...++..+.+.+...+
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-----ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 5566666666666777777777777777665 11122233444455555566677777778888888999999
Q ss_pred HHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 763 VRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPL 842 (1252)
Q Consensus 763 l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~ 842 (1252)
+|.++++++++.|++||++ +++|++++|+++|++.++..+.+....+...++.+++.+++++..+|.+++++++..|+
T Consensus 87 lr~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~ 164 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPL 164 (567)
T ss_pred HHHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999986 66999999999999999999999866666678889999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000856 843 LVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQF 922 (1252)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1252)
+.+......++.++..+..++..++....+.|+++|+++||+|+.++...+++.+..+...+...+..........+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (567)
T COG1132 165 LALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLL 244 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776688888888899999999999999999999999999999999999998888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 000856 923 ALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEP 1002 (1252)
Q Consensus 923 ~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~ 1002 (1252)
+..+...+++++|..++..+.++.|.+++++.+......++..+......+..+..+.+|+++.++.+++....+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--- 321 (567)
T COG1132 245 LSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999975543221111
Q ss_pred CCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH
Q 000856 1003 VETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK 1082 (1252)
Q Consensus 1003 ~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~ 1082 (1252)
.....++|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+||++++++
T Consensus 322 ~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~ 399 (567)
T COG1132 322 LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLD 399 (567)
T ss_pred CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHH
Confidence 2234577999999999973 34799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
.||++|++|||||+||+|||+|||++|+++++|||+++|++.++++|+++++|+||||++||+|.+||||||||||||||
T Consensus 400 ~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARa 479 (567)
T COG1132 400 SLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARA 479 (567)
T ss_pred HHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhH
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYS 1242 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~ 1242 (1252)
++++|+|||||||||+||++||+.|++++++..+++|+|+||||++++++||+|+|||+|+|+|+|+|+||+++ +|.|+
T Consensus 480 ll~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~ 558 (567)
T COG1132 480 LLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYA 558 (567)
T ss_pred HhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHH
Confidence 99999999999999999999999999999988888999999999999999999999999999999999999998 99999
Q ss_pred HHHHHhhh
Q 000856 1243 RLLQLQHH 1250 (1252)
Q Consensus 1243 ~l~~~q~~ 1250 (1252)
+||+.|..
T Consensus 559 ~l~~~~~~ 566 (567)
T COG1132 559 RLYQAQGG 566 (567)
T ss_pred HHHHHhhc
Confidence 99999864
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.4e-84 Score=809.69 Aligned_cols=570 Identities=24% Similarity=0.300 Sum_probs=486.3
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
+++++++.++.++.++++++..++..++....++++..+++.....+.. ......+..+++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777888888888888888888888888888888865422111 11122234444555556677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
.+.+.+...++|.++++++++.|.+||+ ++++|++++|+++|++.+++.+...+..++.+++.++++++++++++|++
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
++++++++|+.+++.....+..++..++..+..++..+.+.|.++|+++||+|++++.+.+++.+..++..+...+..+.
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888877777788888888888999999999999999999999999999999999999888887777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKV---------IKVFVVLVVTANSVAETVSLAPEIIRGGESVGSV 983 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 983 (1252)
......+..++..+...++.+++...+ .|.+++|.+ +.+..+......|+..+.....++.++..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666555555555544444444433 366666643 2222344556788999999999999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC
Q 000856 984 FSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD 1063 (1252)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~ 1063 (1252)
.++++.+++.++... .....+..+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 325 ~~~l~~~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~- 400 (588)
T PRK11174 325 VTFLETPLAHPQQGE-KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL- 400 (588)
T ss_pred HHHHcCCCcccCCCc-cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-
Confidence 999986543221111 0111112457999999988753 346999999999999999999999999999999999999
Q ss_pred CCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccC
Q 000856 1064 PTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVG 1143 (1252)
Q Consensus 1064 p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vg 1143 (1252)
|++|+|++||+|+++++.+++|++|+||||||++|+|||||||.+++++++|||+++|++.++++++++++|+||||.+|
T Consensus 401 p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vg 480 (588)
T PRK11174 401 PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIG 480 (588)
T ss_pred CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccc
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCE
Q 000856 1144 ERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGR 1223 (1252)
Q Consensus 1144 e~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1223 (1252)
|+|.+||||||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+
T Consensus 481 e~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 481 DQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred EEEecChhhhhcCCCchhHHHHHHhhhcC
Q 000856 1224 IVEQGSHSELVSRPDGAYSRLLQLQHHHI 1252 (1252)
Q Consensus 1224 Ive~G~~~eLl~~~~g~y~~l~~~q~~~~ 1252 (1252)
|+|.|+|+||+++ +|.|++++..|.+++
T Consensus 561 i~e~G~~~eL~~~-~~~y~~l~~~q~~~~ 588 (588)
T PRK11174 561 IVQQGDYAELSQA-GGLFATLLAHRQEEI 588 (588)
T ss_pred EeecCCHHHHHhc-chHHHHHHHHhhcCC
Confidence 9999999999987 899999999998764
No 16
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-83 Score=735.82 Aligned_cols=553 Identities=27% Similarity=0.364 Sum_probs=494.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 689 MGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMML 768 (1252)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 768 (1252)
+..+.+++.+++....+++++..++..+.... ......++..++++.++..++...+.....+.+.++...+|+.++
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666667777777778877777665432 223344555666666667777778888888899999999999999
Q ss_pred HHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 769 AAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANF 848 (1252)
Q Consensus 769 ~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~ 848 (1252)
+++.+.++.|-.. .++|++.+.....++.++.++...++.+...++..+..++.+++++|..+++++++.|++.++++
T Consensus 81 ~~l~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi 158 (559)
T COG4988 81 DKLAKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI 158 (559)
T ss_pred HHHHhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998864 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 849 AQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASE 928 (1252)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1252)
......++..++.......++.++.|.++|+.|+|+||..+...++..+...+..+..++.-+..-+...+..++.+++.
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888899988888
Q ss_pred HHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCcc
Q 000856 929 ALILWYGVHLVGK-GVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIR 1007 (1252)
Q Consensus 929 ~~~~~~g~~lv~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1252)
+++..+.+..... |.+++...+.++...-=++.|+.++.+.++....+..+.+.++.+++.+.+..+........+..+
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~ 318 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPP 318 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCC
Confidence 8776554444444 899998888888888888999999999999999998999999999887655433322111122223
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
.+++++|++|+|++.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.++||++
T Consensus 319 ~ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 4566779999998543 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1088 IGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
++||||+|++|+|||||||.+++++.+||+++++++.+++.++++. |+|+||++||+|.+|||||+||+++|||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHH
Q 000856 1168 AILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQL 1247 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~ 1247 (1252)
++++|||||||||.+||+.|++.|.++++++|||+||||++.++++|+|+|||+||++|.|+|++|.++ +|.|++|+++
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~ 554 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQ 554 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 8999999998
Q ss_pred hhh
Q 000856 1248 QHH 1250 (1252)
Q Consensus 1248 q~~ 1250 (1252)
|.+
T Consensus 555 q~~ 557 (559)
T COG4988 555 QEG 557 (559)
T ss_pred Hhc
Confidence 864
No 17
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.4e-83 Score=810.49 Aligned_cols=564 Identities=32% Similarity=0.503 Sum_probs=501.4
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 672 YFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYF 751 (1252)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1252)
.+++++++.++.++++...+++.++..++....+++++.+++........ ........+++++.++..++.+++.++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGLRGGS 224 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777777788887888888888888888888888888876532211 111222334444555566777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 752 FSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWR 831 (1252)
Q Consensus 752 ~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 831 (1252)
+.+.+.++..++|.+++++++++|++||++ ++.|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.
T Consensus 225 ~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 225 FNYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999975 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000856 832 VSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSL 911 (1252)
Q Consensus 832 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1252)
+++++++.+|+.+++.....++.++..++.++..++....+.|+++|+++||+|+.++++.+++.+..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888889999999999999999999999999999999999998888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000856 912 TAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRST 991 (1252)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 991 (1252)
...........+..+..++++++|.+++..|.++.|.++++..+......++..+.....++.++..+.+|+.++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 77776677777777788888999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEE
Q 000856 992 RIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMI 1071 (1252)
Q Consensus 992 ~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~i 1071 (1252)
+.++... ..+++.++.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 463 ~~~~~~~--~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 463 NIPLTGT--LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred CCCCCCC--CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 4322111 11123457899999999998655567999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1072 DGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1072 dG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
||+|+++++.+.+|++|+||||||.+|+|||||||.++.++.+||+++++++.++++++++++|+|+||.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChh
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
|||||||||||++++|+|||||||||+||+++|+.+++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3345789999999999999999999999999999999999
Q ss_pred hhhcCCCchhHHHH
Q 000856 1232 ELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1232 eLl~~~~g~y~~l~ 1245 (1252)
||+++ +|.|++|+
T Consensus 699 eL~~~-~~~y~~lv 711 (711)
T TIGR00958 699 QLMED-QGCYKHLV 711 (711)
T ss_pred HHHhC-CCchHhcC
Confidence 99987 78999873
No 18
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.5e-82 Score=806.56 Aligned_cols=562 Identities=25% Similarity=0.350 Sum_probs=498.6
Q ss_pred HHHHHHh-hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKL-NAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYF 751 (1252)
Q Consensus 673 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1252)
++++++. .++.++.+...++.+++..++....++++..+++.+..... ......+...++++.++..++.+++.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 199 (686)
T TIGR03797 123 LRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLA 199 (686)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444 34556666666667777777777778888888876653211 1122233444555566677788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 752 FSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWR 831 (1252)
Q Consensus 752 ~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 831 (1252)
..+.+.++..++|.++++++++.|++||+ +++.|++++|++ |++.+++.+...+...+..++.++++++++++++|+
T Consensus 200 ~~~~~~~~~~~l~~~~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (686)
T TIGR03797 200 VLRLETRMDASLQAAVWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWK 276 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996 488999999997 799999999988888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000856 832 VSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSL 911 (1252)
Q Consensus 832 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1252)
+++++++++|+.+++.++..+..++..++..+..++..+.+.|+++|+++||+++.++++.++|.+..++..+...+...
T Consensus 277 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 356 (686)
T TIGR03797 277 LALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQR 356 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000856 912 TAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRST 991 (1252)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 991 (1252)
...+...+..++..+..++++|+|.+++..|.++.|.++++..+......|+..+.....++.....+.+|+.++++.++
T Consensus 357 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 436 (686)
T TIGR03797 357 IENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALP 436 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88888888888888899999999999999999999999999999999999999999999999999999999999988654
Q ss_pred CCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEE
Q 000856 992 RIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMI 1071 (1252)
Q Consensus 992 ~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~i 1071 (1252)
+.+... ....+..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 437 e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 512 (686)
T TIGR03797 437 EVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFY 512 (686)
T ss_pred ccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEE
Confidence 432111 1112345689999999999643 357999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1072 DGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1072 dG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
||+|+++++++++|++|+||||||.+|+|||||||.++++ +++|++++|++.++++++++++|+|+||++||+|.+|||
T Consensus 513 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSG 591 (686)
T TIGR03797 513 DGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSG 591 (686)
T ss_pred CCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCH
Confidence 9999999999999999999999999999999999999988 999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChh
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
||||||+||||++++|+|||||||||+||++||+.+++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+
T Consensus 592 GQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~ 669 (686)
T TIGR03797 592 GQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYD 669 (686)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999999999886 68999999999999999999999999999999999
Q ss_pred hhhcCCCchhHHHHHHh
Q 000856 1232 ELVSRPDGAYSRLLQLQ 1248 (1252)
Q Consensus 1232 eLl~~~~g~y~~l~~~q 1248 (1252)
||+++ +|.|++|++.|
T Consensus 670 ~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 670 ELMAR-EGLFAQLARRQ 685 (686)
T ss_pred HHHhC-CcHHHHHHHhc
Confidence 99987 89999999876
No 19
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-82 Score=793.46 Aligned_cols=568 Identities=21% Similarity=0.256 Sum_probs=483.0
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 25 PFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAE 104 (1252)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (1252)
.++++++|.+++++. ++++++++++.+++.+..+++++.++|.+...+.+. .....+...++++.++..++.+++
T Consensus 9 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 83 (588)
T PRK11174 9 LTRWLKQQSKPAKRW-LNLSILLGFLSGLLLIAQAWLLATILQALIIENIPR----EALLPPFILLILLFVLRALLAWLR 83 (588)
T ss_pred hhHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367788888877654 556777777777777777778899998764221111 122233444455566777888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000856 105 IACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSA 184 (1252)
Q Consensus 105 ~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 184 (1252)
.++....+.++..++|.+++++++++|+++|++. ++|++++|+++|++.+++++...++.++..++.+++.++++++++
T Consensus 84 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (588)
T PRK11174 84 ERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPIN 162 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999865 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHH
Q 000856 185 WRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKA 264 (1252)
Q Consensus 185 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 264 (1252)
|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.+++.+..++..+...+.
T Consensus 163 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 242 (588)
T PRK11174 163 WAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEV 242 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 265 GMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKA---------FTAIFSAIVGGMSLGQSFSNLGAFSKGKAAG 335 (1252)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 335 (1252)
.+......++..++..+..+++++++++.+. |.++.|.+ +.++.+......|+..+...+..+.++..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~ 321 (588)
T PRK11174 243 LRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAA 321 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766665555555555544444455555443 66776643 1111222334467888888888999999999
Q ss_pred HHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000856 336 YKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIER 415 (1252)
Q Consensus 336 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g 415 (1252)
+|+.++++.+++.+.+. .........+.|+++||+|.|++ +.++|+|+||+|++||++|||||||||||||+++|+|
T Consensus 322 ~ri~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g 398 (588)
T PRK11174 322 ESLVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLG 398 (588)
T ss_pred HHHHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 99999998754321111 11111112346999999987753 3468999999999999999999999999999999999
Q ss_pred ccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccc
Q 000856 416 FYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYST 495 (1252)
Q Consensus 416 ~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 495 (1252)
++ |++|+|.+||+|+++++.+++|++|+||+|+|+||++||+|||.+|.|+.++++++++++.++++++++.+|+|++|
T Consensus 399 ~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 399 FL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred CC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccc
Confidence 99 99999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEe
Q 000856 496 QVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQ 575 (1252)
Q Consensus 496 ~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 575 (1252)
.+||+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.+..||+|++|+
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCEEEEecChHHHHhcccchHHHHHHHH
Q 000856 576 QGQVVETGTHEELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 576 ~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 603 (1252)
+|+++++|+|+|++++++.|++++..|.
T Consensus 558 ~G~i~e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 558 DGQIVQQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred CCeEeecCCHHHHHhcchHHHHHHHHhh
Confidence 9999999999999999999999987654
No 20
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.1e-82 Score=803.13 Aligned_cols=563 Identities=23% Similarity=0.378 Sum_probs=498.3
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
+++++.+.++.++++...++.+++..++....++++..+++.+..... ......+...++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555666666666777777777777788888888876653221 11122233344445555667778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
.+.+.++..+++.++++++++.|++||+. ++.|++++|++ |.+.+.+.+...+...+..++.++++++++++++|++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999974 89999999997 9999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
++++++.+|+++++.++..+..++..++..+..+...+.+.|+++|+++||++|.++.+.+++.+...+..+...+....
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888899888999999999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTR 992 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 992 (1252)
......+..++..+..++++++|.+++..|.+|.|.++++..+......|+..+.....++..+..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77777778888888888999999999999999999999999999999999999999999999999999999999986554
Q ss_pred CCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEEC
Q 000856 993 IDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMID 1072 (1252)
Q Consensus 993 ~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~id 1072 (1252)
.+.... ..+.++..+.|+|+||+|+|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 458 ~~~~~~-~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~id 534 (708)
T TIGR01193 458 FINKKK-RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLN 534 (708)
T ss_pred cccccc-ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEC
Confidence 322111 0112234578999999999963 3469999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEccccccCcccHHHHhccC-CCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1073 GKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYG-KEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1073 G~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~-~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
|+|+++++++++|++|+||||||++|+|||||||.++ .+++++++++++++.+++++++.++|+||||++||+|.+|||
T Consensus 535 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSg 614 (708)
T TIGR01193 535 GFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISG 614 (708)
T ss_pred CEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCH
Confidence 9999999999999999999999999999999999998 578999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChh
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|+
T Consensus 615 GQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~ 693 (708)
T TIGR01193 615 GQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHD 693 (708)
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999999999885 689999999999999999999999999999999999
Q ss_pred hhhcCCCchhHHHHH
Q 000856 1232 ELVSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1232 eLl~~~~g~y~~l~~ 1246 (1252)
||+++ +|.|++|++
T Consensus 694 ~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 694 ELLDR-NGFYASLIH 707 (708)
T ss_pred HHHhc-CCcHHHHhh
Confidence 99987 899999975
No 21
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1e-81 Score=802.71 Aligned_cols=563 Identities=25% Similarity=0.353 Sum_probs=497.6
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
++.++...++.++.+...++++++..++....+++...+++........ .....+...++++.++..++.+++.++.
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 142 LRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ---DWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555666666666666666677777777788877765532211 1122233444455566677788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
.+.+.++..+++.++++++++.|++||+. +++|++++|++.| +.+++++...+...+.+++.+++.++++++++|++
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 295 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVL 295 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999974 8899999999988 68999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
++++++.+|+.+++.++..+..++..++..+..++..+.+.|+++|+++||++++++.+.++|.+...+..+...+....
T Consensus 296 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 375 (710)
T TIGR03796 296 TLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVL 375 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888899999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTR 992 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 992 (1252)
......+..++..+..++++++|++++..|.++.|.++++..+......|+..+...+.++.....+.+|+.++++.+++
T Consensus 376 ~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 455 (710)
T TIGR03796 376 TQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVD 455 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCC---C-CCCC-CCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCc
Q 000856 993 IDPDDP---D-AEPV-ETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAG 1067 (1252)
Q Consensus 993 ~~~~~~---~-~~~~-~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G 1067 (1252)
.+.... . .... ++..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 456 PLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred cccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 322110 0 0111 2345789999999999743 35799999999999999999999999999999999999999999
Q ss_pred eEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCC
Q 000856 1068 KVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGV 1147 (1252)
Q Consensus 1068 ~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~ 1147 (1252)
+|++||+|+++++++++|++|+||||||.+|+|||||||.++.++++++++++|++.+++++++.++|+|+||++||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEe
Q 000856 1148 QLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1148 ~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~ 1227 (1252)
+|||||||||+||||++++|+|||||||||+||++||+.+.+.|++ .++|+|+||||++++..||||+||++|+|+|.
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~ 692 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQR 692 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999999999999987 48999999999999999999999999999999
Q ss_pred cChhhhhcCCCchhHHHH
Q 000856 1228 GSHSELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~~l~ 1245 (1252)
|+|+||+++ +|.|++|+
T Consensus 693 G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 693 GTHEELWAV-GGAYARLI 709 (710)
T ss_pred cCHHHHHHc-CCcHHHHh
Confidence 999999987 89999987
No 22
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-81 Score=716.51 Aligned_cols=552 Identities=26% Similarity=0.334 Sum_probs=496.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 44 GSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKY 123 (1252)
Q Consensus 44 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 123 (1252)
..+++.+.+++...+.+++...++.+.... .......+...++++.+++.++.+.+.......+.++..++|..+
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~-----~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~ 79 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQ-----LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLV 79 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666666666667777777765331 123455566677778888999999999999999999999999999
Q ss_pred HHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000856 124 LEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGG 203 (1252)
Q Consensus 124 ~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~ 203 (1252)
++++.++++.+-.+. ++|+..+.+.+.++.++.+++.++|.++.+.+.+++.++.+++++|.-++++++++|++++++.
T Consensus 80 l~~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi 158 (559)
T COG4988 80 LDKLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI 158 (559)
T ss_pred HHHHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999998764 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 204 LYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSW 283 (1252)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1252)
+++++.++..++++..+.+.++.+.|.++|+.|+|.|+..+...+++.+..++.++..|+.-+..-.+..++.++.++..
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888889999988
Q ss_pred HHHHHHHHHHHHc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCc
Q 000856 284 ALVFWYAGVFIRN-GVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVN 362 (1252)
Q Consensus 284 ~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 362 (1252)
+++..|.+....+ |.++....+.+++..--.+.|+..+...++.-+.+.+++++++.+++.+++..............+
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~ 318 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPP 318 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCC
Confidence 8888887777777 788887777777666667789999999999999999999999999987755322111111112222
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..++.+|++|+|++++ ++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||++
T Consensus 319 ~ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 3455669999998653 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 443 IGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 443 i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
++||+|+|.+|++|+||||++++++.+++++.++++.+++.+++.. |+|+||.+||+|.+|||||+|||++|||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHHH
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 602 (1252)
+++|||||||+||.++|+.+.+.|.++.+++|+|+||||++.+..+|+|++|++|+++++|+|+++.+++|.|+++...|
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q 555 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQ 555 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred Hh
Q 000856 603 EM 604 (1252)
Q Consensus 603 ~~ 604 (1252)
+.
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 53
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.9e-81 Score=773.39 Aligned_cols=566 Identities=22% Similarity=0.309 Sum_probs=487.1
Q ss_pred HHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 674 LRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPA-SMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
++++++.++.++.++++++..++..+.....+++++.+++........ ........+...++++.++..++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 5 LPFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566667777777777777777777777777777777754322110 0000011112234445566677778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
.+.+.++..++|.++++++++.|++||++ .++|++++|+++|++.++.++...+..++.+++.++++++++++++|++
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 162 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTL 162 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999974 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVL-ANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSL 911 (1252)
Q Consensus 833 ~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1252)
++++++++|++.+ ..++..+..++..++.++..+.....+.|.++|+++||+|+.++++.+++.+..++..+...+..+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 242 (574)
T PRK11160 163 ALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQAN 242 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888887654 345556666777778888889999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000856 912 TAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVV-TANSVAETVSLAPEIIRGGESVGSVFSTLDRS 990 (1252)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~ 990 (1252)
.......+..++..+..++++++|.+++ .|.++.|.+++++.+... ...++..+......+.++..+.+|+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~ 321 (574)
T PRK11160 243 LTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQK 321 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888888888888888888889999884 788999998887776544 34577777788888899999999999999876
Q ss_pred CCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEE
Q 000856 991 TRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVM 1070 (1252)
Q Consensus 991 ~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~ 1070 (1252)
++.+.... ....+..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 322 ~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~ 398 (574)
T PRK11160 322 PEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEIL 398 (574)
T ss_pred CCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 54221111 1111234679999999999743 24699999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1071 IDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1071 idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
+||+|+++++.+++|++|+||||||++|++||+|||.++.++.+|++++++++.+++++++++ |+||||++||+|.+||
T Consensus 399 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LS 477 (574)
T PRK11160 399 LNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLS 477 (574)
T ss_pred ECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCC
Confidence 999999999999999999999999999999999999999888999999999999999999999 9999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~ 1230 (1252)
||||||+|||||++++|+|||||||||+||++||+.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 478 gGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 478 GGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hhhhcCCCchhHHHHHH
Q 000856 1231 SELVSRPDGAYSRLLQL 1247 (1252)
Q Consensus 1231 ~eLl~~~~g~y~~l~~~ 1247 (1252)
+||+++ +|.|++||+.
T Consensus 558 ~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 558 QELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHHhc-CcHHHHHHhh
Confidence 999987 8999999863
No 24
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.1e-81 Score=833.28 Aligned_cols=569 Identities=31% Similarity=0.483 Sum_probs=490.3
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
+.+++++..++.+ .++++++++++.++..|+++++++.+++.+.... ........|++++++++++.+++.+++.
T Consensus 813 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~l~~~~~~i~~~~~~~l~~ 887 (1466)
T PTZ00265 813 LRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA----NLEANSNKYSLYILVIAIAMFISETLKN 887 (1466)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666656544 3677888889999999999999999999765321 1112344577777888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhc-cCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDT-DARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSA 184 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~-~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 184 (1252)
++..++++++..++|.++|++++++|++||++ +.++|++++|+++|++.+++++...+..++..++.++++++++++++
T Consensus 888 ~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~ 967 (1466)
T PTZ00265 888 YYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFC 967 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999985 23799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHHhhHHHHHHHcchHHH
Q 000856 185 WRLALLSIAVIPGIAFAGGLYAYTLTGLTS-K-----------------SRESYANAGIIAEQAIAQVRTVYSYVGESKA 246 (1252)
Q Consensus 185 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~ 246 (1252)
|.+++++++++|+ +...+.++.+.... + ..+..++.+..+.|+++|+++||+|+.|+++
T Consensus 968 ~~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~ 1044 (1466)
T PTZ00265 968 PIVAAVLTGTYFI---FMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYF 1044 (1466)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHH
Confidence 9988776544333 33344443332111 1 1233566788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 247 LNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLG 326 (1252)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (1252)
.++|.+..++..+...+.....++..++..++..+..++++|+|++++.+|.+++|++++++++.+....++..+...+.
T Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~ 1124 (1466)
T PTZ00265 1045 CNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKG 1124 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888888888888999999999999999999988877665555556777888889
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCCCCc---CCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCC
Q 000856 327 AFSKGKAAGYKLMEIIKQKPSIIQDPTNGRC---LDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSG 403 (1252)
Q Consensus 327 ~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sG 403 (1252)
.+.+++.+++|+.++++.+++.+..+..... .....+.|+|+||+|+||++++.++|+|+||+|++|+++|||||||
T Consensus 1125 ~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SG 1204 (1466)
T PTZ00265 1125 DSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETG 1204 (1466)
T ss_pred HHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCC
Confidence 9999999999999999876543211111111 1223467999999999987655679999999999999999999999
Q ss_pred CcHHHHHHHHhcccCC------------------------------------------------------CCcEEEECCc
Q 000856 404 SGKSTVVSLIERFYDP------------------------------------------------------NAGHVLLDNV 429 (1252)
Q Consensus 404 sGKSTll~~l~g~~~~------------------------------------------------------~~G~i~~~g~ 429 (1252)
||||||+++|+|+|+| ++|+|++||+
T Consensus 1205 sGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~ 1284 (1466)
T PTZ00265 1205 SGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGV 1284 (1466)
T ss_pred CCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCE
Confidence 9999999999999999 6999999999
Q ss_pred cccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 430 DIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 430 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
|+++++.+++|++|+||+|+|.||++||+|||.+|.+++++++++++++.+++++++..+|+|+||.+|++|.+||||||
T Consensus 1285 di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQk 1364 (1466)
T PTZ00265 1285 DICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQK 1364 (1466)
T ss_pred EHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHH
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeC----CEEE-Ee
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQ----GQVV-ET 582 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~----G~i~-~~ 582 (1252)
|||||||||+++|+|||||||||+||+++++.+++.|.++. +++|+|+||||+++++.||+|+||++ |+++ ++
T Consensus 1365 QRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~ 1444 (1466)
T PTZ00265 1365 QRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAH 1444 (1466)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEe
Confidence 99999999999999999999999999999999999999984 68999999999999999999999999 9955 89
Q ss_pred cChHHHHh-cccchHHHHHHH
Q 000856 583 GTHEELIA-KAGAYASLIRFQ 602 (1252)
Q Consensus 583 g~~~~l~~-~~~~~~~~~~~~ 602 (1252)
|+|+||++ ++|.|+++++.+
T Consensus 1445 Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1445 GTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred cCHHHHHhcCCChHHHHHhhc
Confidence 99999998 589999988654
No 25
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.4e-80 Score=786.73 Aligned_cols=565 Identities=33% Similarity=0.516 Sum_probs=493.4
Q ss_pred CchHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000856 23 SLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSY 102 (1252)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1252)
...+++++++.++++ ..++.++++.++..+.....+++.+.++|.+.... +.. .+....++++++.++..++.+
T Consensus 146 ~~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~ 219 (711)
T TIGR00958 146 ADLLFRLLGLSGRDW-PWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDK-GPP----ALASAIFFMCLLSIASSVSAG 219 (711)
T ss_pred hhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 345778888876654 44555666666666666566667899999875332 111 222233344455666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 103 AEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV 182 (1252)
Q Consensus 103 ~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 182 (1252)
++.++..+.+.++..++|.+++++++++|+++|++. ++|++++|+++|++.+++.+...+..++..+..+++.+++++.
T Consensus 220 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~ 298 (711)
T TIGR00958 220 LRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLW 298 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999865 8999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHH
Q 000856 183 SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGY 262 (1252)
Q Consensus 183 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 262 (1252)
++|.+++++++.+|+..++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...
T Consensus 299 ~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 378 (711)
T TIGR00958 299 LSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNK 378 (711)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 263 KAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEII 342 (1252)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 342 (1252)
+.....+....+..++..+..++++++|++++.+|.+++|.+++++.+......++..+...+..++++..+.+|+.+++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l 458 (711)
T TIGR00958 379 RKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYL 458 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77666666555555666666677788999999999999999999888888888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCc
Q 000856 343 KQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAG 422 (1252)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 422 (1252)
+.+++.+... ...+.+..+.|+++||+|+||++++.++|+|+||+|+|||+++||||||||||||+++|+|+|+|++|
T Consensus 459 ~~~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G 536 (711)
T TIGR00958 459 DRKPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGG 536 (711)
T ss_pred CCCCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCC
Confidence 8765532211 11122234679999999999865556799999999999999999999999999999999999999999
Q ss_pred EEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCC
Q 000856 423 HVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGV 502 (1252)
Q Consensus 423 ~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 502 (1252)
+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+|.++.+++++.++++.++++++++.+|+|+||.+|++|.
T Consensus 537 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~ 616 (711)
T TIGR00958 537 QVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGS 616 (711)
T ss_pred EEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCC
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEe
Q 000856 503 QLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 503 ~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
+||||||||++||||++++|+|+|||||||+||+++++.+.+ ....+++|+|+||||++.+..||+|++|++|+|+++
T Consensus 617 ~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~ 694 (711)
T TIGR00958 617 QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEM 694 (711)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999998 233468999999999999999999999999999999
Q ss_pred cChHHHHhcccchHHH
Q 000856 583 GTHEELIAKAGAYASL 598 (1252)
Q Consensus 583 g~~~~l~~~~~~~~~~ 598 (1252)
|+|+|++++++.|+++
T Consensus 695 Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 695 GTHKQLMEDQGCYKHL 710 (711)
T ss_pred eCHHHHHhCCCchHhc
Confidence 9999999998888764
No 26
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-80 Score=775.73 Aligned_cols=567 Identities=30% Similarity=0.474 Sum_probs=493.4
Q ss_pred HHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 674 LRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFS 753 (1252)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1252)
+.++.+.++.++.++..++..++..+.....++++..+++....... ......+...++++.++..++.+++.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 90 (582)
T PRK11176 14 RRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD---RSVLKWMPLVVIGLMILRGITSFISSYCIS 90 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455555555555555444545556666666655442211 111112223344455666677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 754 IMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVS 833 (1252)
Q Consensus 754 ~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 833 (1252)
+.+.+....+|..+++++++.|.++|+ +.+.|++++|+++|++.+...+...+..++..++.++++++++++++|+++
T Consensus 91 ~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 168 (582)
T PRK11176 91 WVSGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLS 168 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999996 478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000856 834 LLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTA 913 (1252)
Q Consensus 834 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1252)
+++++++|+.+++.+...+..++..++..+...+....+.|.++|+++||+++.++.+.+++.+..++..+...+.....
T Consensus 169 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T PRK11176 169 LILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSAS 248 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999989888888888888888888888889999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000856 914 GILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRI 993 (1252)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 993 (1252)
.....+..++..+...+++++|.+++..|.+++|++++++.+......|+..+...+..+.....+.+|+.+.++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 328 (582)
T PRK11176 249 SISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEK 328 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999998754432
Q ss_pred CCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECC
Q 000856 994 DPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDG 1073 (1252)
Q Consensus 994 ~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG 1073 (1252)
+... ...++..+.|+|+||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 329 ~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g 404 (582)
T PRK11176 329 DEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDG 404 (582)
T ss_pred CCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECC
Confidence 2111 1112334679999999999743 35799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCC-CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1074 KDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEG-ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1074 ~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~-~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
+|+++++.+++|++|+||||||++|+|||||||.++.++ .+|++++++++.++++++++++|+|+||++||+|.+||||
T Consensus 405 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGG 484 (582)
T PRK11176 405 HDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGG 484 (582)
T ss_pred EEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHH
Confidence 999999999999999999999999999999999998654 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhh
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||||+|||||+++|+|||||||||+||++||+.+.+.|.+..+++|+|+||||+++++.||+|++|++|+|+|.|+|++
T Consensus 485 qrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~ 564 (582)
T PRK11176 485 QRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAE 564 (582)
T ss_pred HHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred hhcCCCchhHHHHHHhhh
Q 000856 1233 LVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1233 Ll~~~~g~y~~l~~~q~~ 1250 (1252)
|+++ ++.|++|+..|.+
T Consensus 565 l~~~-~~~y~~l~~~~~~ 581 (582)
T PRK11176 565 LLAQ-NGVYAQLHKMQFG 581 (582)
T ss_pred HHhC-CChHHHHHHHHhc
Confidence 9987 7899999998764
No 27
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-80 Score=789.27 Aligned_cols=552 Identities=26% Similarity=0.405 Sum_probs=488.8
Q ss_pred HHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 676 LLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIM 755 (1252)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1252)
++.+..+.++.+...++.+++..++....++++..+++........ .....+...++.+.++..++.+++.++..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 138 FWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF---ETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445555566666666666777777777788777765432211 1112233334444555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 756 GENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLL 835 (1252)
Q Consensus 756 ~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~ 835 (1252)
+.++..+++.++++|++++|++| + ++++|++++|+ +|++.+++.+...+...+..++.++++++++++++|+++++
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999998 4 46899999999 89999999999988888888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000856 836 ILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGI 915 (1252)
Q Consensus 836 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1252)
+++.+|+.+++.++..+..++..++..+..++..+.+.|+++|+++||+|+.++.+.++|.+..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888899999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000856 916 LFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDP 995 (1252)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 995 (1252)
...+...+..+..++++++|++++..|.+++|.++++..+......|+..+...+.++.....+.+|+.++++.+++.++
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999987654322
Q ss_pred CCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcc
Q 000856 996 DDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKD 1075 (1252)
Q Consensus 996 ~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~d 1075 (1252)
... .....+..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|
T Consensus 451 ~~~-~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 528 (694)
T TIGR03375 451 GTR-FLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVD 528 (694)
T ss_pred CCC-CCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE
Confidence 111 11112345689999999999743 3469999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1076 IRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1076 i~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
+++++++++|++++||||||++|+|||||||.++++++++++++++++.++++++++++|+||||.+||+|.+|||||||
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQ 608 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQ 608 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhc
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|.|+|+||++
T Consensus 609 RlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 609 AVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999987
Q ss_pred C
Q 000856 1236 R 1236 (1252)
Q Consensus 1236 ~ 1236 (1252)
+
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 5
No 28
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.7e-80 Score=770.86 Aligned_cols=567 Identities=23% Similarity=0.346 Sum_probs=480.2
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 672 YFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYF 751 (1252)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1252)
.+++++.+..+.+++++..+++.++..++....++++..+++......+... .....+.++++++.++..++.+.+.++
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (592)
T PRK10790 10 TLKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLL 88 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555666667777777777777777788888888876543221110 011112223444444556667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 752 FSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWR 831 (1252)
Q Consensus 752 ~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 831 (1252)
....+.+...++|.++++++++.|.+||+. .++|++++|+++|++.+++.+...+..++..++.+++.++++++++|+
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 89 FNRAAVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999974 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000856 832 VSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSL 911 (1252)
Q Consensus 832 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1252)
+++++++++|+.++......+..+...++..+...+...++.|.++|+++||+|+.++.+.+++.+..++..+...+...
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888877777777777777777777888889999999999999999999999999999988887777666665
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000856 912 TAGIL-FGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRS 990 (1252)
Q Consensus 912 ~~~~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~ 990 (1252)
..... ..+..++......++.+++.. +..|.++.|.++++..+......|+..+...+.++.+...+++|+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55433 233333333332333333333 5789999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEE
Q 000856 991 TRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVM 1070 (1252)
Q Consensus 991 ~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~ 1070 (1252)
++.... ...+...++|+|+||+|+|++ ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 326 ~~~~~~----~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 326 RQQYGN----DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred CccCCC----CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 432111 111223467999999999974 24699999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1071 IDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1071 idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
+||+|+++++++.+|++|+||||||.+|+|||||||++++ +++|++++++++.+|++++++++|+||||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999987 689999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~ 1230 (1252)
|||||||+|||||+++|+|||||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hhhhcCCCchhHHHHHHhhh
Q 000856 1231 SELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1231 ~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
+||+++ ++.|+++++.|..
T Consensus 559 ~~L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 559 QQLLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred HHHHhC-CCHHHHHHHHHhh
Confidence 999987 7999999998754
No 29
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.7e-79 Score=762.50 Aligned_cols=562 Identities=34% Similarity=0.560 Sum_probs=497.5
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
+++++.+.+ .+ .++.+.++.++...+....+.+++.++|.+... . .....+...++++.++..++.+...
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~----~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD---L----GELLELLLLLLLLALLGGVLRALQS 73 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---H----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544 34 455566666665566555666778888876611 1 1233344555556667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
++..+.+.++..++|.+++++++++|+++|++. ++|++++|+++|++.++..+......+..++.++++.+++++..+|
T Consensus 74 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (567)
T COG1132 74 YLGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSW 152 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 888888999999999999999999999999965 7899999999999999999999866666678888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
.+++++++..|++.+...++.++.++...+.++..++.++.+.|.++|+++||+|+.++.+.+++.+..++..+...+..
T Consensus 153 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (567)
T COG1132 153 RLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRAS 232 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988889999999999999999999999999999999999999999999888888887877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
...+...++...+..+..++++++|++.+..+.++.|.+.+++.+......|+..+...+..++.+..+.+|++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~ 312 (567)
T COG1132 233 RLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEE 312 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88777777888888888889999999999999999999888888888888899999999999999999999999999986
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 346 PSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
++....+. . .....+.|+++||+|+|++ +.++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|+
T Consensus 313 ~~~~~~~~-~--~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~ 387 (567)
T COG1132 313 PEVEDPPD-P--LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEIL 387 (567)
T ss_pred ccccCCCC-C--CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEE
Confidence 65322111 1 2223467999999999984 34699999999999999999999999999999999999999999999
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
+||+|+++++.+++|++|+||||+|+||++||+|||.+|+|++++++++++++.+++++++..+|+|+||.+||+|.+||
T Consensus 388 idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LS 467 (567)
T COG1132 388 IDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLS 467 (567)
T ss_pred ECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecCh
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 585 (1252)
||||||++||||++++|+|||||||||+||+++++.+++.+.++.+++|+|+|+||++++.+||+|+||++|+++|.|+|
T Consensus 468 gGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h 547 (567)
T COG1132 468 GGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTH 547 (567)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHHH
Q 000856 586 EELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 586 ~~l~~~~~~~~~~~~~~~ 603 (1252)
+||++++|.|+++++.+.
T Consensus 548 ~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 548 EELLAKGGLYARLYQAQG 565 (567)
T ss_pred HHHHHcCCHHHHHHHHhh
Confidence 999999999999998764
No 30
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-83 Score=697.00 Aligned_cols=502 Identities=29% Similarity=0.423 Sum_probs=431.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 743 VAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSF 822 (1252)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~ 822 (1252)
++.-++.++......-..+++.-++|+|+..+++.|+- ++..|+++.-..+..+.+. ++.....++...++.+.+++
T Consensus 274 ~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 274 FLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred chhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 44445667777778888999999999999999999985 4778888887777666655 44444444444455554444
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHh
Q 000856 823 IVA-FIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRV 901 (1252)
Q Consensus 823 i~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~ 901 (1252)
+.. ..++||.+++++++..++........-...++.|+......+....-.+++-+.+|+|.|++++...+++.+...+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~ 430 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILK 430 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHH
Confidence 433 3468999998888877766555444333334444445555556666678999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 902 PQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVG 981 (1252)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 981 (1252)
+++..++....-..+......+..+...+.-.+.++++..+..++|+++.+..++.....|+.....+...+++....++
T Consensus 431 Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmE 510 (790)
T KOG0056|consen 431 YQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDME 510 (790)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHH
Confidence 99998888777767766666666665555555566677788999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcc
Q 000856 982 SVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERF 1061 (1252)
Q Consensus 982 ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl 1061 (1252)
++++++.++++.. +.|..+|....+|.|+|+||+|.|. |++|+|+||||+++||+.+|+|||||+||||++++|+||
T Consensus 511 nmfdllkee~eVv-d~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRf 587 (790)
T KOG0056|consen 511 NMFDLLKEEPEVV-DLPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRF 587 (790)
T ss_pred HHHHHhhcCchhh-cCCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHH
Confidence 9999998766543 2233333345678999999999995 467899999999999999999999999999999999999
Q ss_pred CCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCc
Q 000856 1062 YDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTP 1141 (1252)
Q Consensus 1062 ~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~ 1141 (1252)
||.++|.|+|||+||+++..++||++||+||||..||++||.+||.|++|.+++||+.+|++.+++||.|.++|+||+|.
T Consensus 588 fdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~ 667 (790)
T KOG0056|consen 588 FDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTR 667 (790)
T ss_pred hhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeC
Q 000856 1142 VGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQD 1221 (1252)
Q Consensus 1142 vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1221 (1252)
|||+|-.||||||||+||||+++++|.|++||||||+||..||+.||.++.+.+.++|.|+||||++|+.++|.|+|+++
T Consensus 668 VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~ 747 (790)
T KOG0056|consen 668 VGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISN 747 (790)
T ss_pred hhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecChhhhhcCCCchhHHHHHHhhh
Q 000856 1222 GRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1222 G~Ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
|+|+|.|+|+||+++.+|.|++||+.|+.
T Consensus 748 G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 748 GRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred CeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 99999999999999989999999987754
No 31
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.8e-79 Score=778.49 Aligned_cols=566 Identities=27% Similarity=0.413 Sum_probs=499.8
Q ss_pred HHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 674 LRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFS 753 (1252)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1252)
.++++..++.+..+...++.+++..++....++++..+++....... ......+...++++.++..++.+++.++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 128 SWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555566666666666667777778888776643211 112223344455555667777888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 754 IMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVS 833 (1252)
Q Consensus 754 ~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 833 (1252)
..+.++..++|.+++++++++|++||+ +++.|++++|+ +|++.+++++...+...+..++.+++.++++++++|+++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 281 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLT 281 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 48899999999 799999999988888888777777777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000856 834 LLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTA 913 (1252)
Q Consensus 834 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1252)
+++++++|+++++.++..+..++..++..+..++..+.+.|+++|+++||++|.++.+.++|.+..++..+...+..+..
T Consensus 282 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (694)
T TIGR01846 282 GVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLG 361 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888788888888999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000856 914 GILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRI 993 (1252)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 993 (1252)
.....+..++..+..++++|+|.+++..|.++.|.++++..+......|+..+.....++..+..+.+|+.++++.+++.
T Consensus 362 ~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 441 (694)
T TIGR01846 362 NIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEP 441 (694)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999866543
Q ss_pred CCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECC
Q 000856 994 DPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDG 1073 (1252)
Q Consensus 994 ~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG 1073 (1252)
+... ........+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 442 ~~~~--~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 442 RSAG--LAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred cCCC--CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 2211 11112235789999999999743 34699999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1074 KDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1074 ~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
+|+++++.+++|++++||||||.+|+|||||||.++.+++++++++++++.+++++++.++|+||||.++++|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
|||++||||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|++|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHhh
Q 000856 1234 VSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1234 l~~~~g~y~~l~~~q~ 1249 (1252)
+++ +|.|++|++.|.
T Consensus 679 ~~~-~~~y~~l~~~~~ 693 (694)
T TIGR01846 679 LAL-QGLYARLWQQQS 693 (694)
T ss_pred HHc-CChHHHHHHhhc
Confidence 997 899999998764
No 32
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.6e-79 Score=774.65 Aligned_cols=564 Identities=27% Similarity=0.307 Sum_probs=490.5
Q ss_pred chHHHHHHh-hchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSF-ADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSY 102 (1252)
Q Consensus 24 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1252)
..+++++++ .+++++ .++..++++++..++....+++++.++|.+.... +. ..+..+++.++++.++..++.+
T Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~ 194 (686)
T TIGR03797 121 LGLRDLLRFALRGARR-DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA-DR----SLLVQIALALLAAAVGAAAFQL 194 (686)
T ss_pred ccHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 446677766 344433 3334444444444444444456788888876432 11 2233344555556667788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 103 AEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV 182 (1252)
Q Consensus 103 ~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 182 (1252)
++.+.....+.++..++|.+++++++++|+.||++. ++|++++|++ |++.+++++...+...+..+..+++.++++++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (686)
T TIGR03797 195 AQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFY 272 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999865 8999999997 89999999998888888888778888889999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHH
Q 000856 183 SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGY 262 (1252)
Q Consensus 183 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 262 (1252)
++|.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+++.|+++.++|++..++..+...
T Consensus 273 ~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 352 (686)
T TIGR03797 273 YSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLEL 352 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999889988888889999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 263 KAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEII 342 (1252)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 342 (1252)
+..+.......+..++..+..++++++|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.+++
T Consensus 353 ~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 432 (686)
T TIGR03797 353 SAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPIL 432 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888877777777777777888899999999999999999998887777777899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCc
Q 000856 343 KQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAG 422 (1252)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 422 (1252)
+.+++.+... .......+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+|+|+|+|+|++|
T Consensus 433 ~~~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 508 (686)
T TIGR03797 433 EALPEVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESG 508 (686)
T ss_pred cCCcccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC
Confidence 8765432111 1112234579999999999743 35699999999999999999999999999999999999999999
Q ss_pred EEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCC
Q 000856 423 HVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGV 502 (1252)
Q Consensus 423 ~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 502 (1252)
+|.+||+|+++++.+++|++|+||+|+|++|++||+|||.++.| .++++++++++.++++++++.+|+|++|.+|++|.
T Consensus 509 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~ 587 (686)
T TIGR03797 509 SVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGG 587 (686)
T ss_pred EEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCC
Confidence 99999999999999999999999999999999999999999988 88999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEe
Q 000856 503 QLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 503 ~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
+||||||||++||||++++|+|||||||||+||+++++.+.+.|+++ ++|+|+||||++.+..||+|++|++|+++++
T Consensus 588 ~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~ 665 (686)
T TIGR03797 588 TLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQ 665 (686)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999887 6899999999999999999999999999999
Q ss_pred cChHHHHhcccchHHHHHHH
Q 000856 583 GTHEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 583 g~~~~l~~~~~~~~~~~~~~ 602 (1252)
|+|+|++++++.|+++++.|
T Consensus 666 G~~~~Ll~~~~~y~~l~~~q 685 (686)
T TIGR03797 666 GTYDELMAREGLFAQLARRQ 685 (686)
T ss_pred CCHHHHHhCCcHHHHHHHhc
Confidence 99999999999999987643
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.4e-80 Score=694.77 Aligned_cols=544 Identities=27% Similarity=0.417 Sum_probs=468.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC-chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 000856 698 GFIGPTFAIVMACMIEVFYYRNP-ASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEV 776 (1252)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~ 776 (1252)
.+.....+.++...++..-..+. +.........+..|..+.+...++..++...+.+..+++.+..-.+.|.+.++++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34445556666666665532211 11112223456677777788888889999999999999999999999999999999
Q ss_pred CcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000856 777 GWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVA-FIVEWRVSLLILGTYPLLVLANFAQQLSLK 855 (1252)
Q Consensus 777 ~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~ 855 (1252)
+||-+ .++|.+.+.+.+....+...+...+..++..++.+......+ .-+.+..+++.+..+..+..+.+....+..
T Consensus 123 ~~~~~--~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 123 SFFLS--RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred HhhcC--CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99964 788999999999998988888888877777776665554333 334566666666666666666666666666
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 856 GFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYG 935 (1252)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 935 (1252)
++.++...+.......+.|++.+.++||+||.|++..+++...+.++.+...+.+...+++......+..+..+.+.+++
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~ 280 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLG 280 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777788888899999999999999999999999999999999999999999888888888888888888888888889
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeE
Q 000856 936 VHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHV 1015 (1252)
Q Consensus 936 ~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nv 1015 (1252)
..-+..+.+++++++.+.........|+..+.....+..++...+..++...+........ +.+....++.|+|+||
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV 357 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDV 357 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEee
Confidence 8888899999999999999999999999999998888888888888777665432221111 1223345678999999
Q ss_pred EEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEcccc
Q 000856 1016 DFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEP 1095 (1252)
Q Consensus 1016 sf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~ 1095 (1252)
+|.|+ |++++|+++||+|++||||||||+|||||||++++|+||++ ++|+|+|||+||++++++.+|+.||+||||.
T Consensus 358 ~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~ 434 (591)
T KOG0057|consen 358 HFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDS 434 (591)
T ss_pred EEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcc
Confidence 99996 34569999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000856 1096 ALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEA 1175 (1252)
Q Consensus 1096 ~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEp 1175 (1252)
.||++||.+||.||++.+++||+.++|+++++||.+.++|+||+|.|||+|..||||||||++||||++++|+|+++|||
T Consensus 435 ~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEa 514 (591)
T KOG0057|consen 435 VLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEA 514 (591)
T ss_pred cccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHHhhh
Q 000856 1176 TSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1176 TS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
||+||.+||+.|.+.+.+...++|+|+|+||++++++||+|+++|+|+++|.|+|+||++ +++.|+++|..|..
T Consensus 515 TS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 515 TSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred ccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 999999999999999999889999999999999999999999999999999999999999 59999999998854
No 34
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-79 Score=690.76 Aligned_cols=504 Identities=23% Similarity=0.341 Sum_probs=437.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHH
Q 000856 736 GAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNM 815 (1252)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~ 815 (1252)
++++...+..+...+..+....++...+|.++|+++...+..-.. ...+|+++||+..|++.+|+.+-..+.+.+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 345666677777778888888899999999999999988777664 478999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHH
Q 000856 816 TSLLTSFIVAFIVEWRVSLLILGTY-PLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSL 894 (1252)
Q Consensus 816 ~~~~~~~i~~~~~~~~l~l~~l~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 894 (1252)
+...+..+.+.+++|.+++.+...+ .+.+++.+...++-++..++.....+.+.+++.|.+.|....+.||+++++.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 9888888888888998887766555 445556667777888888888999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000856 895 FCHELRVPQSQTLRRSLTAGILFGISQFALHASEA-LILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETV-SLAPE 972 (1252)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 972 (1252)
+.+..+.+.+...+......+......++..+..+ .++|.+ ..+..|..+......+.+.....+.++..+. ....+
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~ 302 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQH 302 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99999998888888888888877777777766666 334444 3445565554434444444444455555555 66677
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChH
Q 000856 973 IIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKS 1052 (1252)
Q Consensus 973 ~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKS 1052 (1252)
..+...|+.|+.+..+++++...+.+ +....+..++++||||+|++. ..++|+|+||++++||||||+||||||||
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~~~~---~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTFPDE---QTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCCCcc---ccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHH
Confidence 88888999999999887665443211 111112279999999999865 45799999999999999999999999999
Q ss_pred HHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHh
Q 000856 1053 SVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVS 1132 (1252)
Q Consensus 1053 TLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~ 1132 (1252)
||+++|.|.|+|++|+|.++|++++.++.+++|+.|++++|.+++|++|+|+||.+++|++||||+|++++++|++++++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc
Q 000856 1133 ALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG 1212 (1252)
Q Consensus 1133 ~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~ 1212 (1252)
+.|+||||++||+|.+|||||||||+|||+||++++++||||||.+||+.||++|++.|.+..+|+|+|+||||+..++.
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~ 538 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER 538 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHH
Q 000856 1213 VDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQL 1247 (1252)
Q Consensus 1213 ~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~ 1247 (1252)
||||+|||+|+++|+|+|.+|+++ +|.|+++++.
T Consensus 539 ~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q~ 572 (573)
T COG4987 539 MDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQL 572 (573)
T ss_pred cCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhcc
Confidence 999999999999999999999996 9999999753
No 35
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.6e-79 Score=775.86 Aligned_cols=565 Identities=25% Similarity=0.353 Sum_probs=490.9
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYA 103 (1252)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1252)
..+++++++.+++++. ++..++++++..++....+++++.++|.+.... .. ..+..+++.++++.++..++.++
T Consensus 142 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~ 215 (708)
T TIGR01193 142 NSLLKFIPLITRQKKL-IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK-MM----GTLGIISIGLIIAYIIQQILSYI 215 (708)
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-Ch----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777665553 334444444444444444556788898875432 11 12233344445556667788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 104 EIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS 183 (1252)
Q Consensus 104 ~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 183 (1252)
+.++..+.+.++..++|.+++++++++|+.+|++. ++|++++|++ |++.+++++...+...+..+..+++.+++++++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (708)
T TIGR01193 216 QIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQ 293 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999865 8999999997 999999999888888888888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Q 000856 184 AWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYK 263 (1252)
Q Consensus 184 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 263 (1252)
+|.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||++|.|+.+.+++++...+..+...+
T Consensus 294 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 373 (708)
T TIGR01193 294 NMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFK 373 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000856 264 AGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 343 (1252)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 343 (1252)
..+..+....+..++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 453 (708)
T TIGR01193 374 YQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYL 453 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 87777776666666666777788899999999999999999988887777788999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcE
Q 000856 344 QKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGH 423 (1252)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 423 (1252)
.+++.+... ......+..+.|+++||+|+|++ ++++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+
T Consensus 454 ~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 454 VDSEFINKK-KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred CCCcccccc-cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 765432211 11112233467999999999973 346999999999999999999999999999999999999999999
Q ss_pred EEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcC-CCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCC
Q 000856 424 VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYG-KPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGV 502 (1252)
Q Consensus 424 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 502 (1252)
|++||.|+++++.+++|++|+||||+|++|++||+|||.++ .++.+++++.++++.+++++++..+|+|++|.+|++|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999999999998 57788999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEe
Q 000856 503 QLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 503 ~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
+||||||||++||||++++|+|||||||||+||+++++.+.+.|+++ +++|+|+||||++.+..||+|++|++|++++.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999886 68999999999999999999999999999999
Q ss_pred cChHHHHhcccchHHHHH
Q 000856 583 GTHEELIAKAGAYASLIR 600 (1252)
Q Consensus 583 g~~~~l~~~~~~~~~~~~ 600 (1252)
|+|+|++++++.|+++++
T Consensus 690 G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDRNGFYASLIH 707 (708)
T ss_pred CCHHHHHhcCCcHHHHhh
Confidence 999999999999988763
No 36
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-78 Score=750.46 Aligned_cols=567 Identities=22% Similarity=0.273 Sum_probs=482.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
+++++++.+++++. ++++++++++..++....+++++.++|............. ........+++++++..++.|++.
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (574)
T PRK11160 4 LLPFLKLYKRHWFM-LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSF-NYMLPAAGVRGAAIGRTAGRYGER 81 (574)
T ss_pred hHHHHHHHhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhH-HHHhHHHHHHHHHHHHHHHHHHHH
Confidence 45566776665443 4455666555555554555567888886432111000000 011112234445667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
++.+..+.++..++|.+++++++++|+.+|++. ++|++++|+++|++.+++++...++.++..++.+++.++++++++|
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDL 160 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999865 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAF-AGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKA 264 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 264 (1252)
++++++++.+|++.+ +..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.+++++..++..+...+.
T Consensus 161 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (574)
T PRK11160 161 TLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQ 240 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888887665 4466778888888888999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000856 265 GMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSA-IVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 343 (1252)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 343 (1252)
.+..+...++..++..+..++++++|++++ +|.++.|.+++++.+. .....++..+...+..++++..+.+|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~ 319 (574)
T PRK11160 241 ANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITE 319 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888777777777777777888898884 7888999877765443 33345666677778889999999999999998
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcE
Q 000856 344 QKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGH 423 (1252)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 423 (1252)
.+++.+..+. ....+..+.|+++||+|+|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+
T Consensus 320 ~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 320 QKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 7654321111 1111234579999999999753 246899999999999999999999999999999999999999999
Q ss_pred EEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCC
Q 000856 424 VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQ 503 (1252)
Q Consensus 424 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 503 (1252)
|.+||+|+++++.+.+|++|+||+|+|++|++||+|||.++.++.+++++.++++.++++++++. |+|+||.+|++|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999988899999999999999999999 99999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEec
Q 000856 504 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 504 LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
||||||||++||||++++|+++|||||||+||+++++.+.+.+.++.+++|+|+||||++++..||+|++|++|++++.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhcccchHHHHH
Q 000856 584 THEELIAKAGAYASLIR 600 (1252)
Q Consensus 584 ~~~~l~~~~~~~~~~~~ 600 (1252)
+|+|+++++|.|+++++
T Consensus 556 ~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 556 THQELLAQQGRYYQLKQ 572 (574)
T ss_pred CHHHHHhcCcHHHHHHh
Confidence 99999999999998875
No 37
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.6e-78 Score=773.53 Aligned_cols=563 Identities=25% Similarity=0.341 Sum_probs=488.0
Q ss_pred chHHHHHHhhchhhHH--HHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSFADKYDWC--LMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSS 101 (1252)
Q Consensus 24 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1252)
..+++++++.+++++. .++++.++..+.+++.|+ +++.++|...... +. ..+..+++.++++.++.+++.
T Consensus 140 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~---~~~~iid~v~~~~-~~----~~l~~~~~~~~~~~~~~~~~~ 211 (710)
T TIGR03796 140 SLLRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPA---FSQIFVDEILVQG-RQ----DWLRPLLLGMGLTALLQGVLT 211 (710)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhcC-Ch----hHHHHHHHHHHHHHHHHHHHH
Confidence 3466676666655432 222233333344455555 5778888765432 11 112233444445566677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 102 YAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF 181 (1252)
Q Consensus 102 ~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 181 (1252)
+++.++....+.++..++|.+++++++++|+++|++. ++|++++|+++| +.+++++...+...+..+..+++.+++++
T Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 289 (710)
T TIGR03796 212 WLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLML 289 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999865 899999999988 78999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHH
Q 000856 182 VSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLG 261 (1252)
Q Consensus 182 ~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 261 (1252)
+++|.+++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||++++|+.+.++|.+...+..+..
T Consensus 290 ~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 369 (710)
T TIGR03796 290 LYDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQ 369 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 262 YKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEI 341 (1252)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 341 (1252)
.+..+...+...+..++..+..++++++|++++.+|.+++|.++++..+......|+..+...+..++++..+.+|+.++
T Consensus 370 ~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~i 449 (710)
T TIGR03796 370 QELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDV 449 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777777777777777778889999999999999999999888777777789999999999999999999999999
Q ss_pred HccCCCCCCCCC---C-CCcC-CCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcc
Q 000856 342 IKQKPSIIQDPT---N-GRCL-DEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERF 416 (1252)
Q Consensus 342 l~~~~~~~~~~~---~-~~~~-~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~ 416 (1252)
++.+++.+.... . .... ....+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+
T Consensus 450 l~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl 528 (710)
T TIGR03796 450 LRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGL 528 (710)
T ss_pred HcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 987654321110 0 0111 2234679999999999853 35699999999999999999999999999999999999
Q ss_pred cCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCcccc
Q 000856 417 YDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQ 496 (1252)
Q Consensus 417 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 496 (1252)
|+|++|+|.+||.|+++++.+++|++|+||||+|++|++||+|||.++.++.++++++++++.+++++++..+|+|++|.
T Consensus 529 ~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~ 608 (710)
T TIGR03796 529 YQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAE 608 (710)
T ss_pred CCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccce
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeC
Q 000856 497 VGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQ 576 (1252)
Q Consensus 497 ~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 576 (1252)
+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.+++ .++|+|+||||++.+..||+|++|++
T Consensus 609 i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~ 686 (710)
T TIGR03796 609 LAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLER 686 (710)
T ss_pred eccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999987 48999999999999999999999999
Q ss_pred CEEEEecChHHHHhcccchHHHH
Q 000856 577 GQVVETGTHEELIAKAGAYASLI 599 (1252)
Q Consensus 577 G~i~~~g~~~~l~~~~~~~~~~~ 599 (1252)
|++++.|+|+|++++++.|++++
T Consensus 687 G~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 687 GKVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred CEEEEecCHHHHHHcCCcHHHHh
Confidence 99999999999999999998875
No 38
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=5.6e-78 Score=752.93 Aligned_cols=564 Identities=32% Similarity=0.516 Sum_probs=503.5
Q ss_pred HHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 676 LLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIM 755 (1252)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1252)
++++.++.++.++++++..++.+++.+..++.+..+++....... ......+..+++++.++..++.+++.++..+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWV 81 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455666677777777777777777777777765443221 11122234455666667777788889999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 756 GENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLL 835 (1252)
Q Consensus 756 ~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~ 835 (1252)
+.++...+|..+++++++.|.++|++ .+.|++.+|+++|++.+++.+...+..++..++.++++++++++++|+++++
T Consensus 82 ~~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i 159 (571)
T TIGR02203 82 SNKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLI 159 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999974 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000856 836 ILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGI 915 (1252)
Q Consensus 836 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1252)
+++..|+.+++.++..+..++..++..+...+..+.+.|.++|+++||+++.++.+.+++.+..++..+...+..+....
T Consensus 160 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T TIGR02203 160 VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSI 239 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888889999999999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000856 916 LFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDP 995 (1252)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 995 (1252)
...+...+..+...+++++|.+++..|.++.|.++++..+......|+..+......+..+..+.+|+.++++.+++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 240 SSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999876544221
Q ss_pred CCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcc
Q 000856 996 DDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKD 1075 (1252)
Q Consensus 996 ~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~d 1075 (1252)
.. .+..+..+.|+++||+|+|++. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||+|
T Consensus 320 ~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~ 395 (571)
T TIGR02203 320 GT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHD 395 (571)
T ss_pred CC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEe
Confidence 11 1111234679999999999753 3479999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEEccccccCcccHHHHhccCCC-CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1076 IRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKE-GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1076 i~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~-~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
+++++.+++|++++||||||++|+|||||||.++.+ +.++++++++++.+++++++.++|+|+||++||+|.+||||||
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqr 475 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQR 475 (571)
T ss_pred HHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHH
Confidence 999999999999999999999999999999999876 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
||||||||++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++|+
T Consensus 476 QRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~ 555 (571)
T TIGR02203 476 QRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELL 555 (571)
T ss_pred HHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHhh
Q 000856 1235 SRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1235 ~~~~g~y~~l~~~q~ 1249 (1252)
++ ++.|++++..|.
T Consensus 556 ~~-~~~~~~~~~~~~ 569 (571)
T TIGR02203 556 AR-NGLYAQLHNMQF 569 (571)
T ss_pred Hc-CCHHHHHHHHhh
Confidence 87 789999988663
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.5e-78 Score=765.07 Aligned_cols=557 Identities=26% Similarity=0.331 Sum_probs=483.5
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYA 103 (1252)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1252)
..+++++++.+++++. +...++++++..++....+++++.++|.+.... +. ..+..+++.++++.++..++.++
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~ 206 (694)
T TIGR03375 133 RPKHWFWSTLKESWPL-YRDVLIASLLINLLALASPLFVMNVYDRVVPNQ-AF----ETLWVLAIGVALAIVFDFVLKTL 206 (694)
T ss_pred ccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cH----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466677766655443 333344444434444444446788888765432 11 12223334444455667788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 104 EIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS 183 (1252)
Q Consensus 104 ~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 183 (1252)
+.++..+.+.++..++|.++++|++++|+.+ ++. ++|++++|+ +|++.+++++...+...+..+..+++.+++++++
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (694)
T TIGR03375 207 RSYFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 544 799999999 7999999999988888888888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Q 000856 184 AWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYK 263 (1252)
Q Consensus 184 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 263 (1252)
+|.++++.++.+|+++++..++.++.++..++..+..++..+.+.|.++|+++||.|++|+.+.+++.+..++..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000856 264 AGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 343 (1252)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 343 (1252)
..+.......+..++..++.++++++|++++.+|.+|+|.+++++.+......|+..+...+..+.+++.+.+|+.++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 443 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQ 443 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888877777777777777888899999999999999999988877777778999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcE
Q 000856 344 QKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGH 423 (1252)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 423 (1252)
.+++.+... .........+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+
T Consensus 444 ~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~ 521 (694)
T TIGR03375 444 LPVERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGS 521 (694)
T ss_pred CCCCCCCCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 765432211 111112234579999999999743 346999999999999999999999999999999999999999999
Q ss_pred EEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCC
Q 000856 424 VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQ 503 (1252)
Q Consensus 424 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 503 (1252)
|.+||+|+++++..++|++|+||+|+|++|++||+|||.++.++.++++++++++.++++++++.+|+|++|.+|++|.+
T Consensus 522 I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~ 601 (694)
T TIGR03375 522 VLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRS 601 (694)
T ss_pred EEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEec
Q 000856 504 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 504 LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
||||||||++||||++++|+|+|||||||+||+++++.+.+.+.++.+++|+|+||||++++..||+|++|++|+++++|
T Consensus 602 LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G 681 (694)
T TIGR03375 602 LSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADG 681 (694)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ChHHHHhc
Q 000856 584 THEELIAK 591 (1252)
Q Consensus 584 ~~~~l~~~ 591 (1252)
+|+|++++
T Consensus 682 ~~~eLl~~ 689 (694)
T TIGR03375 682 PKDQVLEA 689 (694)
T ss_pred CHHHHHHH
Confidence 99999765
No 40
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.1e-77 Score=749.62 Aligned_cols=565 Identities=28% Similarity=0.429 Sum_probs=487.1
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
+++++++.++.+..+.+.++..++..++....++++..+++..... .....+..+++++.++..+..+...++.
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (588)
T PRK13657 7 YARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK------GDIFPLLAAWAGFGLFNIIAGVLVARHA 80 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555556666666777777777777777777788888777765421 1111222333333333334444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
.+...+...+++.++++++++.|..+|+ +.+.|++++|+++|++.+.+.+...+...+..++.+++.++++++++|++
T Consensus 81 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 158 (588)
T PRK13657 81 DRLAHRRRLAVLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRL 158 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666677778999999999999996 47899999999999999999888888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
++++++++|+..++.....+..++..++..+........+.|.++|+++||+|+.++.+.+++.+..++..+...+....
T Consensus 159 ~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (588)
T PRK13657 159 SLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSW 238 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888887777777777777777888899999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTR 992 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 992 (1252)
......+..++..+...+++++|.+++..|.+++|.++++..+......|+..+...+..+..+..+.+|+.+.++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~ 318 (588)
T PRK13657 239 WALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPD 318 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 87777888888888888999999999999999999999999999999999999999999999999999999998876443
Q ss_pred CCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEEC
Q 000856 993 IDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMID 1072 (1252)
Q Consensus 993 ~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~id 1072 (1252)
.+.. +...+..+..+.|+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+|+|++|+|.+|
T Consensus 319 ~~~~-~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~ 395 (588)
T PRK13657 319 VRDP-PGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILID 395 (588)
T ss_pred cCCC-CCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEEC
Confidence 2111 1111111234579999999999742 369999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1073 GKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1073 G~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
|+|+++++.+++|++|+||||||.+|+|||||||.++.++.+|++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 396 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 475 (588)
T PRK13657 396 GTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGG 475 (588)
T ss_pred CEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHH
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhh
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||||||||||+++|+|||||||||+||+++|+.|++.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|++
T Consensus 476 q~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~ 555 (588)
T PRK13657 476 ERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDE 555 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999878999999999999999999999999999999999999
Q ss_pred hhcCCCchhHHHHHHhh
Q 000856 1233 LVSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1233 Ll~~~~g~y~~l~~~q~ 1249 (1252)
|+++ ++.|++|++.|.
T Consensus 556 l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 556 LVAR-GGRFAALLRAQG 571 (588)
T ss_pred HHHC-CChHHHHHHHhh
Confidence 9987 899999998663
No 41
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.3e-77 Score=744.60 Aligned_cols=566 Identities=31% Similarity=0.477 Sum_probs=488.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
+++++++.+++++. ++..+++.++..+.....+++++.++|....+. .. .....+.+.+++++++..++.+++.
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~----~~~~~~~~~~~~~~l~~~~~~~~~~ 86 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKA-DR----SVLKWMPLVVIGLMILRGITSFISS 86 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-ch----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666665554 333444444444444444556677777654321 11 1111223334446667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
++....+.++..++|.++++++++.|+.+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (582)
T PRK11176 87 YCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSW 165 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999865 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
.+++++++++|+..++..++.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.++|++..++..+...+..
T Consensus 166 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T PRK11176 166 QLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMV 245 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998889888888889999999888999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
+.......+..++..+..++++++|++.+.+|.+++|.+.+++.+......|+..+...+..+.+++.+.+|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~ 325 (582)
T PRK11176 246 SASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLE 325 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77777666666776677777888999999999999999887776666677789899999999999999999999999865
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 346 PSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
++.+... ...++..+.|+++||+|+|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.
T Consensus 326 ~~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~ 401 (582)
T PRK11176 326 QEKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEIL 401 (582)
T ss_pred CcCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEE
Confidence 4322111 1112223569999999999753 35699999999999999999999999999999999999999999999
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPE-ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQL 504 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~L 504 (1252)
+||+|+++++.+++|++|+||||+|.+|++||+|||.+|.++ .++++++++++.++++++++.+|+|++|.+|++|.+|
T Consensus 402 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~L 481 (582)
T PRK11176 402 LDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLL 481 (582)
T ss_pred ECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcC
Confidence 999999999999999999999999999999999999998764 6899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 505 SGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 505 SgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
|||||||++||||++++|+|+|||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+++++|+
T Consensus 482 SGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~ 561 (582)
T PRK11176 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGT 561 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999878999999999999999999999999999999999
Q ss_pred hHHHHhcccchHHHHHHH
Q 000856 585 HEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~ 602 (1252)
|++++++++.|+++++.+
T Consensus 562 ~~~l~~~~~~y~~l~~~~ 579 (582)
T PRK11176 562 HAELLAQNGVYAQLHKMQ 579 (582)
T ss_pred HHHHHhCCChHHHHHHHH
Confidence 999999999999998754
No 42
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.7e-77 Score=737.89 Aligned_cols=565 Identities=28% Similarity=0.420 Sum_probs=488.0
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
+++++++.++.++.+...++++++..++....+++++.+++.....+. ...+..++++..++..+..++..++.
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666677777777778888888888888888888887643211 11122222223333344444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
.....+...++|.+++++++++|++||++ +++|++++|+++|++.+...+...+...+..++.+++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667777789999999999999974 7889999999999999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
++++++++|+++++.....+..++..++.........+.+.|+++|+++||+|+.++.+.+++.+..++..+...+..+.
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888777777777777888899999999999999999999999999999999998888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTR 992 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 992 (1252)
......+..++..+..++++++|.+++..|.++.|.++++..+......++..+.....++..+..+.+|+.+.++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 77777777777777888889999999999999999999999999999999999999999999999999999999876443
Q ss_pred CCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEEC
Q 000856 993 IDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMID 1072 (1252)
Q Consensus 993 ~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~id 1072 (1252)
...... ..+.....+.|+++||+|+|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++|
T Consensus 319 ~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~ 395 (585)
T TIGR01192 319 REEPAD-APELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILID 395 (585)
T ss_pred ccCCcc-CCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEEC
Confidence 211111 11111234579999999999742 358999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1073 GKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1073 G~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
|+|+++++.+.+|++++||||||.+|++|++|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+||||
T Consensus 396 g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgG 475 (585)
T TIGR01192 396 GIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGG 475 (585)
T ss_pred CEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHH
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhh
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++
T Consensus 476 q~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 555 (585)
T TIGR01192 476 ERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQE 555 (585)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred hhcCCCchhHHHHHHhh
Q 000856 1233 LVSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1233 Ll~~~~g~y~~l~~~q~ 1249 (1252)
|+++ +|.|+++++.|.
T Consensus 556 l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 556 LIQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHHC-CChHHHHHHhCc
Confidence 9987 899999998774
No 43
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.7e-77 Score=744.82 Aligned_cols=567 Identities=35% Similarity=0.555 Sum_probs=491.5
Q ss_pred HHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 676 LLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIM 755 (1252)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1252)
++++.++.+..+.+.++..++.+++....++.+..+++....... ......+..+++++.++..+..+++.++..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555566666667777777777777777775432211 11122233344444445556667788888899
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 756 GENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLL 835 (1252)
Q Consensus 756 ~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~ 835 (1252)
+.++...+|..+++++++.|.++|+. .+.|++++|+++|++.+++.+...+..++..++.++++++++++++|+++++
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSL 163 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999975 7789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000856 836 ILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGI 915 (1252)
Q Consensus 836 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1252)
+++.+|+.++..++..+..++..++..+...+....+.|.++|+++||+++.++.+.+++.+..++..+...+.......
T Consensus 164 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (576)
T TIGR02204 164 VLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRAL 243 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888888888888888888999999999999999999999999999999999999888877777777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000856 916 LFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDP 995 (1252)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~ 995 (1252)
.......+..+..++++++|.+++..|.++.|.++++..+......|+..+...+.++..+..+.+|+.++++.+++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 323 (576)
T TIGR02204 244 LTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKA 323 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 66666666667777888899999999999999999999999999999999999999999999999999999876543221
Q ss_pred CCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcc
Q 000856 996 DDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKD 1075 (1252)
Q Consensus 996 ~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~d 1075 (1252)
.........+..+.|+|+||+|+|++++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|
T Consensus 324 ~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 324 PAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred CCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11111111223467999999999975433579999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1076 IRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1076 i~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
+++++.+++|++++|+||||++|+|||||||.++.++.++++++++++.+++.++++++|+|+||++||+|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhc
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|++||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred CCCchhHHHHHHh
Q 000856 1236 RPDGAYSRLLQLQ 1248 (1252)
Q Consensus 1236 ~~~g~y~~l~~~q 1248 (1252)
+ ++.|++|++.|
T Consensus 564 ~-~~~~~~l~~~~ 575 (576)
T TIGR02204 564 K-GGLYARLARLQ 575 (576)
T ss_pred c-CChHHHHHhhc
Confidence 6 89999999876
No 44
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.4e-77 Score=738.46 Aligned_cols=521 Identities=21% Similarity=0.265 Sum_probs=447.6
Q ss_pred HHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 677 LKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEF--VFIYIGAGLYAVVAYLIQHYFFSI 754 (1252)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1252)
+++.++.+++++..++..++..++....+++++.+++.....+. ....+ ...++++.++..++.++..++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-----VLYLSVAAVAVRAFGIGRAVFRYLERLVGHD 79 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555566666666677777777777788887776542211 11111 111223344556667778888888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 755 MGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSL 834 (1252)
Q Consensus 755 ~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l 834 (1252)
.+.++..++|.++++++++.|.+||++ .++|++++|+++|++.+++.+...+..++..++.++++++++++++|.+++
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 157 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAAL 157 (529)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999974 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000856 835 LILGTYPLLVLAN-FAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTA 913 (1252)
Q Consensus 835 ~~l~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1252)
++++.+|++.++. ++..+..+...++.++..++..+++.|.++|+++||+|++++.+.+++.+..++..+...+..+..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02868 158 VLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARAT 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877766555 333444455566667778899999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000856 914 GILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRI 993 (1252)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 993 (1252)
.....+..++..+...+++++|.+++..|.++.|.+.++..+......++..+......+..+..+.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (529)
T TIGR02868 238 GLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPR 317 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999999765542
Q ss_pred CCCCCC-CCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEEC
Q 000856 994 DPDDPD-AEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMID 1072 (1252)
Q Consensus 994 ~~~~~~-~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~id 1072 (1252)
+..+.. .....+..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 318 ~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~ 395 (529)
T TIGR02868 318 PEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLD 395 (529)
T ss_pred CCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 211111 11112234679999999999743 369999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1073 GKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1073 G~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
|+|++++ .+++|++|+||||||++|+|||||||.+|.++++||++++|++.+++++++.++|+||||++||+|.+||||
T Consensus 396 g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 396 GVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred CEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 9999999 999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCc
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRL 1207 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl 1207 (1252)
||||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999988899999999996
No 45
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.5e-77 Score=753.57 Aligned_cols=568 Identities=27% Similarity=0.388 Sum_probs=493.1
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYA 103 (1252)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1252)
..+.+++++.+++++. +...++++++..++....+++++.++|.+.... +. ..+..+++.++++.++..++.++
T Consensus 125 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~-~~----~~l~~l~~~~~~~~~~~~~~~~l 198 (694)
T TIGR01846 125 FGFSWFIPAIIRYRKQ-FREVLLISLALQLFALVTPLLFQVVIDKVLVHR-GL----STLSVLALAMLAVAIFEPALGGL 198 (694)
T ss_pred CcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-Ch----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777766655443 333333333333333334446788888775432 11 12333444455566677888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 104 EIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS 183 (1252)
Q Consensus 104 ~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 183 (1252)
+.++....+.++..++|.+++++++++|+.+|++. ++|++++|+ +|++.+++++...+...+..+...++.+++++++
T Consensus 199 ~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 276 (694)
T TIGR01846 199 RTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFY 276 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999865 899999999 6999999999888888887777777778889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Q 000856 184 AWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYK 263 (1252)
Q Consensus 184 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 263 (1252)
+|.+++++++++|+++++..++.++.++..++..+..++.++.+.|.++|+++||++|.|+.+.++|.+..++..+...+
T Consensus 277 ~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 356 (694)
T TIGR01846 277 SPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFR 356 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888899988888888889999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000856 264 AGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 343 (1252)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 343 (1252)
..+.......+..++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 357 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 436 (694)
T TIGR01846 357 VTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILN 436 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888877777777777788888999999999999999999888877777788999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcE
Q 000856 344 QKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGH 423 (1252)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 423 (1252)
.+++.+.. .....+...+.|+++||+|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+
T Consensus 437 ~~~e~~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~ 513 (694)
T TIGR01846 437 SPTEPRSA--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQ 513 (694)
T ss_pred CCCCccCC--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 76543211 111122234679999999999743 345899999999999999999999999999999999999999999
Q ss_pred EEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCC
Q 000856 424 VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQ 503 (1252)
Q Consensus 424 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 503 (1252)
|.+||+|+++++.+++|++|+||+|+|++|++|++|||.++.++.+++++.++++.+++++++..+|+|++|.++++|.+
T Consensus 514 I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~ 593 (694)
T TIGR01846 514 VLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGAN 593 (694)
T ss_pred EEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCC
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEec
Q 000856 504 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 504 LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
||||||||++||||++++|+|+|||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|+++++|
T Consensus 594 LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g 673 (694)
T TIGR01846 594 LSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESG 673 (694)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhcccchHHHHHHH
Q 000856 584 THEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 584 ~~~~l~~~~~~~~~~~~~~ 602 (1252)
+|+|++++++.|+++++.+
T Consensus 674 ~~~~l~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 674 RHEELLALQGLYARLWQQQ 692 (694)
T ss_pred CHHHHHHcCChHHHHHHhh
Confidence 9999999999999988653
No 46
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1e-76 Score=735.51 Aligned_cols=543 Identities=25% Similarity=0.381 Sum_probs=471.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 000856 699 FIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGW 778 (1252)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~f 778 (1252)
++....+++++.+++........ ......|..+++++.++..++.++..++....+.+...++|.++++++++.|++|
T Consensus 9 ~~~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~ 86 (569)
T PRK10789 9 MLQLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEF 86 (569)
T ss_pred HHHHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 33444566666677654322111 1112233444445555566667777888888999999999999999999999999
Q ss_pred ccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000856 779 FDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVA-FIVEWRVSLLILGTYPLLVLANFAQQLSLKGF 857 (1252)
Q Consensus 779 f~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~ 857 (1252)
|++ .++|++++|+++|++.+...+...+..++..++..+++++++ ++++|.+++++++++|+..++.....+..++.
T Consensus 87 ~~~--~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 164 (569)
T PRK10789 87 YLR--HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHER 164 (569)
T ss_pred HcC--CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 974 789999999999999999888888888877766666655555 57899999999999999888887777777777
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 858 AGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVH 937 (1252)
Q Consensus 858 ~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 937 (1252)
.++.++..++..+.+.|.++|+++||+|+.++.+.+++.+..++..+...+..+..............+...+++++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 244 (569)
T PRK10789 165 FKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSW 244 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888999999999999999999999999999999999998888888877777777776777777777888899999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEE
Q 000856 938 LVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDF 1017 (1252)
Q Consensus 938 lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf 1017 (1252)
++..|.++.|.++++..+......|+..+......+..+..+.+|+.++++.+++.+... .+..+.++.|+|+||+|
T Consensus 245 lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 245 MVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQF 321 (569)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEE
Confidence 999999999999999999999999999999999999999999999999997654322111 11112346799999999
Q ss_pred ECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEcccccc
Q 000856 1018 AYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPAL 1097 (1252)
Q Consensus 1018 ~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~l 1097 (1252)
+|+.. +.++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|+++++.+.+|++++||||+|++
T Consensus 322 ~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 99743 34699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCC
Q 000856 1098 FAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATS 1177 (1252)
Q Consensus 1098 f~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS 1177 (1252)
|++|+||||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHHhhh
Q 000856 1178 ALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1178 ~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|+++++.|..
T Consensus 481 ~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 481 AVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 99999999999999998889999999999999999999999999999999999999987 7999999987754
No 47
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.9e-76 Score=736.97 Aligned_cols=566 Identities=25% Similarity=0.359 Sum_probs=475.6
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
+++++.|.+++++. +++.++++++..+..+..+++++.++|.+..... ... .....+++.++++.++..++.+++.
T Consensus 11 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (592)
T PRK10790 11 LKRLLAYGSPWRKP-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGN-LPL--GLVAGLAAAYVGLQLLAAGLHYAQS 86 (592)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cch--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566665555443 4455566666566666666678889987653321 110 1111223334445556777888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
+..+..+.++..++|.++++++++.|+++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (592)
T PRK10790 87 LLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDW 165 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999865 8999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
.+++++++++|+++++..++.++.++..++.++..++..+.+.|.+.|+++||.|+.|+.+.+++.+..++..+...+..
T Consensus 166 ~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (592)
T PRK10790 166 RMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTL 245 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888788888888888888888889999999999999999999999999999998888777766665
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000856 266 MAKGLG-LGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQ 344 (1252)
Q Consensus 266 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 344 (1252)
...+.. ..+..++..+...+++++++. +..|.++.|.+++++.+......|+..+...+..+.++..+.+|+.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~ 324 (592)
T PRK10790 246 RLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDG 324 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 554432 222333332222223333333 578999999998888777777789999999999999999999999999986
Q ss_pred CCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEE
Q 000856 345 KPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHV 424 (1252)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i 424 (1252)
+++.. ... ......+.|+++|++|+|++ +.++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|
T Consensus 325 ~~~~~-~~~---~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I 398 (592)
T PRK10790 325 PRQQY-GND---DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEI 398 (592)
T ss_pred CCccC-CCC---ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE
Confidence 54321 111 11122357999999999974 2459999999999999999999999999999999999999999999
Q ss_pred EECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCC
Q 000856 425 LLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQL 504 (1252)
Q Consensus 425 ~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~L 504 (1252)
.+||+|+++++.+.+|++|+||||+|++|++||+|||.++. +.++++++++++.++++++++.+|+|+||.+|++|.+|
T Consensus 399 ~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~L 477 (592)
T PRK10790 399 RLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNL 477 (592)
T ss_pred EECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCC
Confidence 99999999999999999999999999999999999999997 57899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 505 SGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 505 SgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
|||||||++|||||+++|+|+|||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++.|+
T Consensus 478 SGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~ 557 (592)
T PRK10790 478 SVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGT 557 (592)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcC
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred hHHHHhcccchHHHHHHHHh
Q 000856 585 HEELIAKAGAYASLIRFQEM 604 (1252)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~~~ 604 (1252)
|+|++++++.|+++++.+..
T Consensus 558 ~~~L~~~~~~y~~l~~~~~~ 577 (592)
T PRK10790 558 HQQLLAAQGRYWQMYQLQLA 577 (592)
T ss_pred HHHHHhCCCHHHHHHHHHhh
Confidence 99999999999999876643
No 48
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.6e-75 Score=730.86 Aligned_cols=565 Identities=33% Similarity=0.500 Sum_probs=499.0
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 27 FQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIA 106 (1252)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (1252)
.+++++.+++++ .++++++++++.+++.+..+++++.++|...... .. .....+...++++.++..++.|++.+
T Consensus 3 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~----~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (571)
T TIGR02203 3 RRLWSYVRPYKA-GLVLAGVAMILVAATESTLAALLKPLLDDGFGGR-DR----SVLWWVPLVVIGLAVLRGICSFVSTY 76 (571)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-ch----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555434 4566677777777777777777888888654322 11 11222333455666777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000856 107 CWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWR 186 (1252)
Q Consensus 107 ~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 186 (1252)
..+..+.++..++|..+++++++.|.+++++. ++|++++|+++|++.+++++...+..++..+..+++.++++++++|.
T Consensus 77 ~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 155 (571)
T TIGR02203 77 LLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQ 155 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999864 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 187 LALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGM 266 (1252)
Q Consensus 187 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 266 (1252)
+++++++..|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.++.++.+.+++++..++..+...+..+
T Consensus 156 l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (571)
T TIGR02203 156 LTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTS 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000856 267 AKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKP 346 (1252)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 346 (1252)
..+....+..++..+..++++++|++.+.+|.+++|.++++..+......|+..+...+..+.+++.+.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (571)
T TIGR02203 236 AGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPP 315 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88777777777777777888899999999999999999998888888888999999999999999999999999998755
Q ss_pred CCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEE
Q 000856 347 SIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLL 426 (1252)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~ 426 (1252)
+.+... ....+..+.|+++||+|+|++. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+
T Consensus 316 ~~~~~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i 391 (571)
T TIGR02203 316 EKDTGT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILL 391 (571)
T ss_pred CCCCCC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEE
Confidence 432111 1111234579999999999754 356899999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 427 DNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKP-EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 427 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
||.|+++++.+++|++++||||+|++|++|++|||.++.+ +.++++++++++.+++++++..+|+|+||.+|++|.+||
T Consensus 392 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LS 471 (571)
T TIGR02203 392 DGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLS 471 (571)
T ss_pred CCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCC
Confidence 9999999999999999999999999999999999999986 788999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecCh
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 585 (1252)
||||||++||||++++|+|+|||||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 472 gGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~ 551 (571)
T TIGR02203 472 GGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTH 551 (571)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHH
Q 000856 586 EELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 586 ~~l~~~~~~~~~~~~~~ 602 (1252)
++++++++.|+++++.+
T Consensus 552 ~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 552 NELLARNGLYAQLHNMQ 568 (571)
T ss_pred HHHHHcCCHHHHHHHHh
Confidence 99998888888876543
No 49
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.6e-75 Score=723.67 Aligned_cols=564 Identities=27% Similarity=0.360 Sum_probs=481.5
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
++++++|.+++++ .++++++++++..++.+..+++++.++|.+.... + . ..+.+.++++.++..+..++..
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-~--~-----~~~~~~~~~~~~~~~~~~~~~~ 77 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKS-D--V-----LPTLALWAGFGVFNTIAYVLVA 77 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c--H-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777776655 4455666666667777777778899999765321 1 0 0111122223334444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
+.....+.++..++|.+++++++++|++||+++ ++|++++|+++|++.+++++...+..++..++.+++.+++++.++|
T Consensus 78 ~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 156 (585)
T TIGR01192 78 READRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDW 156 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556666667777899999999999999865 7999999999999999999998888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.+++++..++..+...+..
T Consensus 157 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (585)
T TIGR01192 157 RLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVL 236 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888888889999999999999999999999999999999999988888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
+..++...+..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~ 316 (585)
T TIGR01192 237 DWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSV 316 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77776666666666677778889999999999999999988877777777788888888899999999999999999865
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 346 PSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
++.+... .....+...+.++++|++|+|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 317 ~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 393 (585)
T TIGR01192 317 FQREEPA-DAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQIL 393 (585)
T ss_pred ccccCCc-cCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEE
Confidence 4322111 111111223569999999999743 3589999999999999999999999999999999999999999999
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
+||.|+++++.+.+|++++||+|+|++|++|++|||.++.++.++++++.+++.+++++++..+|+|++|.+|++|.+||
T Consensus 394 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LS 473 (585)
T TIGR01192 394 IDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLS 473 (585)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecCh
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 585 (1252)
||||||++|||||+++|+++|||||||+||+++++.+.+.|.++.+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 474 gGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~ 553 (585)
T TIGR01192 474 GGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSF 553 (585)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHH
Q 000856 586 EELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 586 ~~l~~~~~~~~~~~~~~ 602 (1252)
++++++++.|+++++.+
T Consensus 554 ~~l~~~~~~y~~l~~~~ 570 (585)
T TIGR01192 554 QELIQKDGRFYKLLRRS 570 (585)
T ss_pred HHHHHCCChHHHHHHhC
Confidence 99999999999988765
No 50
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.4e-75 Score=726.19 Aligned_cols=565 Identities=29% Similarity=0.420 Sum_probs=478.0
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
+++++++.+++ +..+.+..+++++..++.+..+++++.++|.+.... . ...+.+.+++++++..+..++..
T Consensus 7 ~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~ 77 (588)
T PRK13657 7 YARVLQYLGAE-KRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG-D-------IFPLLAAWAGFGLFNIIAGVLVA 77 (588)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-c-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677776554 334445555555555555555667888888764321 0 11122222223333334445444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
+...+...++..++|.+++++++++|+.+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++|
T Consensus 78 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (588)
T PRK13657 78 RHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNW 156 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555666667777899999999999999864 8999999999999999998888888888888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
.+++++++++|+..++...+.++.++..++.++..++..+.+.|.+.|+++||.|+.++.+.+++.+..++..+...+..
T Consensus 157 ~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (588)
T PRK13657 157 RLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVL 236 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888888888888888888889999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
...+....+..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~ 316 (588)
T PRK13657 237 SWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAV 316 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77777666666777777778889999999999999999988877777777788888888899999999999999998865
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 346 PSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
++.+..+ ......+..+.|+++|++|+|+++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.
T Consensus 317 ~~~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 317 PDVRDPP-GAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred cccCCCC-CCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 4321111 111112223569999999999742 3589999999999999999999999999999999999999999999
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
+||+|+++++.+.+|++|+||||+|++|++|++|||.++.|+.++++++.+++.+++++++..+|+|++|.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecCh
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 585 (1252)
||||||++||||++++|+|+|||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSF 553 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999988779999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHHH
Q 000856 586 EELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 586 ~~l~~~~~~~~~~~~~~~ 603 (1252)
+++++.++.|.++++.+.
T Consensus 554 ~~l~~~~~~y~~l~~~~~ 571 (588)
T PRK13657 554 DELVARGGRFAALLRAQG 571 (588)
T ss_pred HHHHHCCChHHHHHHHhh
Confidence 999999999999887654
No 51
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.5e-78 Score=694.88 Aligned_cols=480 Identities=32% Similarity=0.503 Sum_probs=370.9
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC----CcEEEECCccccCCCHHH
Q 000856 364 NIEFKNVTFSYPSRPD-VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN----AGHVLLDNVDIKTLQLRW 438 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~----~G~i~~~g~~~~~~~~~~ 438 (1252)
-++++|++..|..... ..+++|+||++.+||++||||+|||||||+++.|.|+.++. +|+|.++|.|+...+.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975422 35899999999999999999999999999999999999987 899999999998877654
Q ss_pred H---h-hhceEEccCCC-Cchh--cHHHHHhc----CCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccc--cCCCCCCC
Q 000856 439 L---R-DQIGLVNQEPA-LFAT--TILENILY----GKPEATMAEVEAAASAANAHSFITLLPNGYSTQV--GERGVQLS 505 (1252)
Q Consensus 439 ~---~-~~i~~v~Q~~~-l~~~--tv~~ni~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~g~~LS 505 (1252)
+ | +.|+|+||+|. .+|. ||.+-|.- ... ...++.. .+. .+.++.. |+.... ++.+.+||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~-~~~~ea~--~~a---~elL~~V--gl~~~~~~~~yPheLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK-GSRAEAR--KRA---VELLEQV--GLPDPERRDRYPHQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc-ccHHHHH--HHH---HHHHHHc--CCCChhhhccCCcccC
Confidence 4 3 46999999984 4543 66555532 111 1111111 111 2222222 332222 45788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEe
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVET 582 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 582 (1252)
||||||+.||+||+.+|++||+||||++||+.++.+|.+.|+++. .|.++|+||||+..+.+ ||||+||.+|+++|.
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~ 236 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVET 236 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999986 48999999999999977 899999999999999
Q ss_pred cChHHHHhcc-cchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccc
Q 000856 583 GTHEELIAKA-GAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAE 661 (1252)
Q Consensus 583 g~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1252)
|+.++++++. ..|..-.
T Consensus 237 G~~~~i~~~p~hpYT~~L-------------------------------------------------------------- 254 (539)
T COG1123 237 GPTEEILSNPQHPYTRGL-------------------------------------------------------------- 254 (539)
T ss_pred cCHHHHHhccCCcccHHH--------------------------------------------------------------
Confidence 9999987642 0110000
Q ss_pred cccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHH
Q 000856 662 TDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYA 741 (1252)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1252)
+. ..+
T Consensus 255 ---------------l~---------------------------------------a~p--------------------- 259 (539)
T COG1123 255 ---------------LA---------------------------------------AVP--------------------- 259 (539)
T ss_pred ---------------Hh---------------------------------------hCC---------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 742 VVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTS 821 (1252)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~ 821 (1252)
..+... ..
T Consensus 260 ------------------------------------~~~~~~-~~----------------------------------- 267 (539)
T COG1123 260 ------------------------------------RLGDEK-II----------------------------------- 267 (539)
T ss_pred ------------------------------------Cccccc-cc-----------------------------------
Confidence 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHh
Q 000856 822 FIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRV 901 (1252)
Q Consensus 822 ~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~ 901 (1252)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 902 PQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVG 981 (1252)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 981 (1252)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCC--------CCccceeeeeEEEeCCcEEEEEcCCCCChHH
Q 000856 982 SVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSR--------PDVVVFKDFNLRIRAGQSQALVGASGSGKSS 1053 (1252)
Q Consensus 982 ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKST 1053 (1252)
..+.. .+ . +...-++++|++.+|..+ ....+++||||++++||++||||+|||||||
T Consensus 268 ------~~~~~-~~--~------~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKST 332 (539)
T COG1123 268 ------RLPRR-GP--L------RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKST 332 (539)
T ss_pred ------ccccc-cc--c------ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHH
Confidence 00000 00 0 011248999999999742 1246899999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEEECCcc--cCCCCHHHHhcccEEEcccccc---CcccHHHHhccCC----C---CCCHHHHHHH
Q 000856 1054 VIALIERFYDPTAGKVMIDGKD--IRRLNLKSLRLKIGLVQQEPAL---FAASIFDNIAYGK----E---GATEAEVVEA 1121 (1252)
Q Consensus 1054 Ll~lL~rl~~p~~G~I~idG~d--i~~~~~~~lR~~i~~VpQd~~l---f~gTIreNl~~~~----~---~~~deei~~a 1121 (1252)
|+++|+|+.+|++|+|.++|.| .+.-+...+|+++-+|+|||+- -..||+++|.-.- . ....+.+.+.
T Consensus 333 lar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~l 412 (539)
T COG1123 333 LARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAEL 412 (539)
T ss_pred HHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHH
Confidence 9999999999999999999977 3333355688899999999963 2579999986321 1 1112346667
Q ss_pred HHHcCchh-hHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CC
Q 000856 1122 ARAANVHG-FVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GR 1198 (1252)
Q Consensus 1122 l~~~~l~~-~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~ 1198 (1252)
++.+++.+ +....| ..||||||||+||||||..+|++||+|||||+||+.+.+.|.+.|.++.+ |.
T Consensus 413 l~~VgL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~ 481 (539)
T COG1123 413 LELVGLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGL 481 (539)
T ss_pred HHHcCCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCC
Confidence 78888764 333333 57999999999999999999999999999999999999999999988763 79
Q ss_pred eEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCchhHHHHH
Q 000856 1199 TTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1199 TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~ 1246 (1252)
|.|+|||+++.++. ||||+||++|+|||.|+.+++.+++...|.+.+-
T Consensus 482 t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~ 530 (539)
T COG1123 482 TYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLL 530 (539)
T ss_pred EEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHH
Confidence 99999999999976 8999999999999999999999998888976654
No 52
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-75 Score=655.98 Aligned_cols=503 Identities=24% Similarity=0.342 Sum_probs=439.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000856 92 YLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLS 171 (1252)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~ 171 (1252)
++++.+.+..|...+..|....++..++|.++|+++...++.-..+ .++||+++|++.|++.+++.+-..+.+.+.++.
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r-~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~ 144 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR-YRSGDLLNRLVADVDALDNLYLRVIAPAVVALV 144 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh-cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHH
Confidence 5688899999999999999999999999999999999999998875 489999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHH
Q 000856 172 TFLAGLVVGFVSAWRLALLSI-AVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSY 250 (1252)
Q Consensus 172 ~~i~~~~~~~~~~~~l~l~~l-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~ 250 (1252)
...+..+...+++|.+++.+. .++.+++++...+.+.-++..++.....+.+-+.+.|.+.|....+.||.++.+.+.+
T Consensus 145 ~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l 224 (573)
T COG4987 145 LIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTAL 224 (573)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHH
Confidence 888777777788998876443 3445555566677777777778888888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000856 251 SDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWA-LVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSF-SNLGAF 328 (1252)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 328 (1252)
+.....+.+...|...+.++...+..++..+..+ .++|.+ ..+..|..+...+..+++.++....++..+. ..+...
T Consensus 225 ~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a-~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 225 EATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMA-AQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999999999999888888888877777766655 344443 4444566664444444444444444554444 556778
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHH
Q 000856 329 SKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKST 408 (1252)
Q Consensus 329 ~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKST 408 (1252)
.+...|++|+.++.+++++...+.. ..+..+..++++||||+|++. +.++|+|+||++++||++||+|+|||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~~~---~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFPDE---QTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCCcc---ccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 8899999999999998876533211 111122279999999999865 457999999999999999999999999999
Q ss_pred HHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhh
Q 000856 409 VVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITL 488 (1252)
Q Consensus 409 ll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1252)
|++++.|.++|++|+|.++|.++..++.+.+|+.|++++|.+++|++|+|||+.+++|++++++++++++++++++.++.
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~ 459 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLES 459 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhcc
Q 000856 489 LPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNV 568 (1252)
Q Consensus 489 ~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~ 568 (1252)
.|+|++|.+||.|..||||||||++|||+|++|++++||||||.+||+.|++++.+.+.+..+|||+|+||||+..++.+
T Consensus 460 ~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~ 539 (573)
T COG4987 460 APDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERM 539 (573)
T ss_pred ChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CEEEEEeCCEEEEecChHHHHhcccchHHHHH
Q 000856 569 DTVAVIQQGQVVETGTHEELIAKAGAYASLIR 600 (1252)
Q Consensus 569 d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 600 (1252)
|||+||++|+|+++|+|++++.++|.|.++++
T Consensus 540 drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 540 DRIIVLDNGKIIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred CEEEEEECCeeeecCCHHhhhccccHHHHHhc
Confidence 99999999999999999999999999988763
No 53
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.8e-75 Score=721.59 Aligned_cols=542 Identities=26% Similarity=0.395 Sum_probs=472.1
Q ss_pred HHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 000856 51 HGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQ 130 (1252)
Q Consensus 51 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~ 130 (1252)
.++..|+ +++.++|.+.....+. .....++..++++.++..++.|+..++.+..+.++..++|.+++++++++
T Consensus 10 ~~~~~p~---~~~~iid~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 10 LQLIPPK---VVGIIVDGVTEQHMTT----GQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred HHHHHHH---HHHHHHHHhccCCcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444555 5778888654321111 12223444445555667778888888888999999999999999999999
Q ss_pred ChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 131 DVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVG-FVSAWRLALLSIAVIPGIAFAGGLYAYTL 209 (1252)
Q Consensus 131 ~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~ 209 (1252)
|+++|++. ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.++.
T Consensus 83 ~~~~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~ 161 (569)
T PRK10789 83 HPEFYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQL 161 (569)
T ss_pred CHHHHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999865 79999999999999999888888888888776666665555 57999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 210 TGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWY 289 (1252)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1252)
++..++.++..++..+.+.|.+.|+++||+|++|+.+.++|.+..++..+...+..+..+....+...+..++.++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (569)
T PRK10789 162 HERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGG 241 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999999998888888877777776666666666666778889
Q ss_pred HHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEe
Q 000856 290 AGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKN 369 (1252)
Q Consensus 290 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 369 (1252)
|++++.+|.+++|.++++..+......|+..+...+..+.+++.+.+|+.++++.+++.+... ...+...+.|+++|
T Consensus 242 g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~ 318 (569)
T PRK10789 242 GSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNI 318 (569)
T ss_pred HHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEE
Confidence 999999999999999888877777778888888899999999999999999998764422111 11112245699999
Q ss_pred EEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccC
Q 000856 370 VTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQE 449 (1252)
Q Consensus 370 v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~ 449 (1252)
++|+|+.. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.+||+++++.+..++|++++||+|+
T Consensus 319 v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 319 RQFTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred EEEECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 99999753 34689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 000856 450 PALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDE 529 (1252)
Q Consensus 450 ~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDE 529 (1252)
|++|++|++|||.++.++.++++++.+++.+++++++..+|+|++|.+|++|.+||||||||++||||++++|+++||||
T Consensus 398 ~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDE 477 (569)
T PRK10789 398 PFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDD 477 (569)
T ss_pred CeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHHHHh
Q 000856 530 ATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQEM 604 (1252)
Q Consensus 530 pts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 604 (1252)
|||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|+++++|+|++++++++.|+++++.++.
T Consensus 478 pts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~~ 552 (569)
T PRK10789 478 ALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQL 552 (569)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhhh
Confidence 999999999999999999988899999999999999999999999999999999999999999999999877643
No 54
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-78 Score=655.85 Aligned_cols=491 Identities=31% Similarity=0.453 Sum_probs=436.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000856 750 YFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIV-AFIV 828 (1252)
Q Consensus 750 ~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~-~~~~ 828 (1252)
.++...+..+...+--+.|.|+.++++.|.-+ +.+|-+..-+......++..+...+..++..++-+...+++ ...+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 34556777788888889999999999999865 44555555555555556666666666666666655554444 4456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHH
Q 000856 829 EWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLR 908 (1252)
Q Consensus 829 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1252)
+||.+.+.++++.++.++.....-..-.+.++...+.+.......+++-+.+|+|.|+-|+.+..++...++.+.+...+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 89999999999888888877766666667777888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000856 909 RSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLD 988 (1252)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~ 988 (1252)
.+..-.++......+...........+...+..|.+|.|+++..-.++.....|+..+.....++.++...++++++.++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 98888888888888888888888899999999999999999999999999999999998899999999999999999998
Q ss_pred ccCCCCCCCCCCCCCC-CccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCc
Q 000856 989 RSTRIDPDDPDAEPVE-TIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAG 1067 (1252)
Q Consensus 989 ~~~~~~~~~~~~~~~~-~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G 1067 (1252)
.+.+.. +.+..++.+ -..|.|.|+||+|.|. +.+|+|+|+||++++|+++||||+||+||||++++|+|||++++|
T Consensus 242 ~~~~v~-d~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 242 VEAEVS-DAPDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred cchhhc-cCCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 765543 223334444 3467899999999995 356899999999999999999999999999999999999999999
Q ss_pred eEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCC
Q 000856 1068 KVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGV 1147 (1252)
Q Consensus 1068 ~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~ 1147 (1252)
.|.+||+||+++..+.+|+.||+||||..||++|+..|+.+|.+.+++||++.|++.+++++|++++|+||||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEe
Q 000856 1148 QLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1148 ~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~ 1227 (1252)
.||||||||+||||++|++|+||+||||||+||..||++||.+|++..+|+|.++||||++|+.++|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhcCCCchhHHHHH
Q 000856 1228 GSHSELVSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~~l~~ 1246 (1252)
|+|+||+++ +|.|++||.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999998 999999996
No 55
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.8e-75 Score=721.86 Aligned_cols=525 Identities=24% Similarity=0.293 Sum_probs=443.3
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 28 QLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIAC 107 (1252)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (1252)
+++++.+++++. +++.++++++..+.....+++++.++|...... . .. ....+...++++.++..++.|+..++
T Consensus 3 ~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (529)
T TIGR02868 3 RILPLLQPRTRR-LVVAILLGALALGSAVALLGVSAWLISRAAEMP--P-VL--YLSVAAVAVRAFGIGRAVFRYLERLV 76 (529)
T ss_pred hHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--h-hH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666555443 334455555545444445556788888754321 1 00 01111112223456677788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000856 108 WMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRL 187 (1252)
Q Consensus 108 ~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 187 (1252)
.+..+.++..++|.+++++++++|+++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.+
T Consensus 77 ~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 155 (529)
T TIGR02868 77 GHDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPA 155 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999999865 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 188 ALLSIAVIPGIAFAGGLYA-YTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGM 266 (1252)
Q Consensus 188 ~l~~l~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 266 (1252)
++++++.+|++.++...+. +..++..++.++..++..+.+.|.++|+++||+|++|+.+.+++++..++..+...+..+
T Consensus 156 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (529)
T TIGR02868 156 ALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAAR 235 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888787766654444 444556667777888999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000856 267 AKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKP 346 (1252)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 346 (1252)
..+....+..++..+..++++++|++++.+|.+++|.+.+++++......++..+...+..+.++..+.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (529)
T TIGR02868 236 ATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKG 315 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88877777777777777888899999999999999998888877777777888888888999999999999999998765
Q ss_pred CCCCCCCC-CCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 347 SIIQDPTN-GRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 347 ~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
+.+..... .....+..+.|+++||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~ 393 (529)
T TIGR02868 316 PRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVT 393 (529)
T ss_pred CcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 42211110 11111223569999999999753 3599999999999999999999999999999999999999999999
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
+||+|++++ .+++|++|+||||+|++|++||+|||.+|.|+.++++++++++.+++++++..+|+|+||.+||+|.+||
T Consensus 394 i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LS 472 (529)
T TIGR02868 394 LDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLS 472 (529)
T ss_pred ECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCC
Confidence 999999999 9999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCc
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRL 562 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~ 562 (1252)
||||||++||||++++|+|+|||||||+||+++++.+++.+.++.+++|+|+||||+
T Consensus 473 GGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 473 GGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999988899999999995
No 56
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.1e-74 Score=723.46 Aligned_cols=570 Identities=35% Similarity=0.552 Sum_probs=485.9
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEI 105 (1252)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1252)
++.++++.+++++ .+++.+++.++.++.....+++++.++|...... +. .....+..+++++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD-SS----GLLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-cH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556555444 3444555566666665566667888888754322 11 1122233334444555667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000856 106 ACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAW 185 (1252)
Q Consensus 106 ~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 185 (1252)
+.....+.++..++|..++++++++|+++|+.. ++|++++|+++|++.+++++...+..++..+..+++.++++++++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 888999999999999999999999999999864 7999999999999999999999899989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||.++.|+.+.+++++..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888888889999999999999999999999999999999999999999999999999988888777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
........+..++..+..++++++|++.+.+|.+++|.++++..+......|+..+...+..+.+++.+.+|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66555555555555556667778899999999999999888877777777889999999999999999999999999865
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEE
Q 000856 346 PSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVL 425 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~ 425 (1252)
++.+..........+..+.|+++||+|+|+++.+.++|+|+||+++|||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~ 398 (576)
T TIGR02204 319 PDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRIL 398 (576)
T ss_pred CcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 44221111111111223469999999999854335699999999999999999999999999999999999999999999
Q ss_pred ECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 426 LDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 426 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
+||.|+++++...+|++++|+||+|++|++||+|||.++.|+.++++++++++.+++.++++.+|+|++|.+|++|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecCh
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 585 (1252)
||||||++||||++++|+++|||||||+||+++++.+.+.++++.+++|+|+||||++.+..+|+|++|++|++++.|+|
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhcccchHHHHHHH
Q 000856 586 EELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 586 ~~l~~~~~~~~~~~~~~ 602 (1252)
++++++++.|+++++.+
T Consensus 559 ~~l~~~~~~~~~l~~~~ 575 (576)
T TIGR02204 559 AELIAKGGLYARLARLQ 575 (576)
T ss_pred HHHHHcCChHHHHHhhc
Confidence 99999999998877543
No 57
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.7e-74 Score=713.22 Aligned_cols=526 Identities=24% Similarity=0.305 Sum_probs=457.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 686 YSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRR 765 (1252)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 765 (1252)
.+.++++.+++.+++....+++++.+++.....+.. ......+..+++++.++..++.++..++..+.+.+...++|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 4 ALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666777777778888888888765321111 112233445555666667778888899999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 766 MMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVL 845 (1252)
Q Consensus 766 ~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~ 845 (1252)
++++++++.|.+||+ +.++|++++|+++|++.+++.+...+..++..++.+++++++++.++|.+++++++.+|+.++
T Consensus 82 ~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999997 488999999999999999999999999999999888888999999999999999998888887
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 846 ANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALH 925 (1252)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1252)
+.+...++.+...++..+...+..+.+.|.++|+++||+|+.++.+.+++.+..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777888888899999999999999999999999999999999988888887777777766666666666
Q ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCC
Q 000856 926 ASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVET 1005 (1252)
Q Consensus 926 ~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~ 1005 (1252)
+...++..++.+.+..|.++.|.++++..+......|+..+......+.++..+.+|+.++++.+++..+. . ..+ .+
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~-~-~~~-~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK-A-PVT-AA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-c-CCC-CC
Confidence 66666555666666799999999999999999999999999999999999999999999999744321111 1 111 11
Q ss_pred ccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHh
Q 000856 1006 IRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1006 ~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1085 (1252)
..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999753 34699999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHcc
Q 000856 1086 LKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLK 1165 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~ 1165 (1252)
++++||||||.+|+|||||||.++.++.+|++++++++.++++++++++|+||||++||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEE
Q 000856 1166 NPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVV 1219 (1252)
Q Consensus 1166 ~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl 1219 (1252)
+|+|+|||||||+||++|++.+++.+++..+++|+|+||||+++++.||+|+||
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999986
No 58
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-74 Score=649.60 Aligned_cols=548 Identities=26% Similarity=0.352 Sum_probs=442.4
Q ss_pred HHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 48 AVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAV 127 (1252)
Q Consensus 48 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i 127 (1252)
.+.........+.+++.++|........+ .........+..+.+..+...++..++...+.++++++..+.-.++|.+.
T Consensus 39 l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~ 117 (591)
T KOG0057|consen 39 LLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHL 117 (591)
T ss_pred HHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334555555556777777653111111 11112223344555667788889999999999999999999999999999
Q ss_pred HcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000856 128 LKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVV-GFVSAWRLALLSIAVIPGIAFAGGLYA 206 (1252)
Q Consensus 128 ~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~l~~l~~~p~~~~~~~~~~ 206 (1252)
+.+++++|.+ .++|++.+.+......|...+...+..++..++-+...... ..-++...+++.+..+.....+.....
T Consensus 118 ~~ld~~~~~~-~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t 196 (591)
T KOG0057|consen 118 MSLDLSFFLS-RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVT 196 (591)
T ss_pred HhhhHHhhcC-CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeeh
Confidence 9999999985 48999999999999999998887777777666554333322 233455555555544444444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 207 YTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALV 286 (1252)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1252)
....+...+...+.+.+.+.+.|.+.|..+||+||.|+++.++|.....++.+...+.....++.......+.....+.+
T Consensus 197 ~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~i 276 (591)
T KOG0057|consen 197 RWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFI 276 (591)
T ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 55556666777788888999999999999999999999999999999999988888777666655544444444444555
Q ss_pred HHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEE
Q 000856 287 FWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIE 366 (1252)
Q Consensus 287 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 366 (1252)
.+.+..-+.++.++.|++............|+..+...+..+.++..-++-.+...+....+. ....+....++.|+
T Consensus 277 m~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~---~~~~~i~~~~~~I~ 353 (591)
T KOG0057|consen 277 MVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQ---EAALPIELFGGSIE 353 (591)
T ss_pred HHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhh---hccCCcccCCCcEE
Confidence 566666677889999988766555566666777777777777777776666555443322211 11122333456799
Q ss_pred EEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEE
Q 000856 367 FKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLV 446 (1252)
Q Consensus 367 ~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 446 (1252)
|+||+|+|+. ++++|+++||+|++||++||||+|||||||++|+|.||++ ++|+|++||+|+++++.+.+|+.||||
T Consensus 354 F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~V 430 (591)
T KOG0057|consen 354 FDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVV 430 (591)
T ss_pred EEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEe
Confidence 9999999973 4569999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEE
Q 000856 447 NQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILL 526 (1252)
Q Consensus 447 ~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ill 526 (1252)
|||..||++||..||.+|++.++++++.++|+.+++||.+.++|+||+|.+||+|..|||||||||+||||++++|+|++
T Consensus 431 PQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 431 PQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred CCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHHHH
Q 000856 527 LDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 527 lDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 603 (1252)
||||||+||.++|+.+.+.+.+...++|+|+|.||+++++.+|+|+++++|++.+.|+|+|++..++.|+++|..|.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTTQT 587 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhcccc
Confidence 99999999999999999999998889999999999999999999999999999999999999998899999987653
No 59
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.3e-73 Score=702.01 Aligned_cols=537 Identities=24% Similarity=0.342 Sum_probs=459.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 684 WPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRV 763 (1252)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 763 (1252)
++.+...++..++..++....++.+..+++....... ......+..+++++.++..++.+++.++..+.+.++..++
T Consensus 5 k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 5 KSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666666777778888888876542211 1112234444555556667778888899999999999999
Q ss_pred HHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 764 RRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAD-RISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPL 842 (1252)
Q Consensus 764 ~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~ 842 (1252)
|.++++++++.|+..+ +...+++++|++.+++.+.. .+..++..++.++ .++++++++|++++++++.+|+
T Consensus 82 r~~~~~~ll~~~~~~~-------~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l 153 (544)
T TIGR01842 82 NQPIFAASFSATLRRG-------KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVV 153 (544)
T ss_pred HHHHHHHHhcCcccCc-------cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999998533 34678899999999998877 4444454444444 4467888999999988888888
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000856 843 LVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQF 922 (1252)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1252)
++++.++..+..++..++..+...+..+.+.|+++|+++||+|+.++.+.+++.+..++..+...+..........+..+
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 154 LVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776666666677777778888999999999999999999999999999999999999888888888877777777777
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 000856 923 ALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEP 1002 (1252)
Q Consensus 923 ~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~ 1002 (1252)
+..+..++++++|.+++..|.++.|.++++..+......|+..+.....++..+..+.+|+.++++.+++..+. .+
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~ 309 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CC
Confidence 77778888899999999999999999999999999999999999999999999999999999999765442211 11
Q ss_pred CCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH
Q 000856 1003 VETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK 1082 (1252)
Q Consensus 1003 ~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~ 1082 (1252)
..+..+.|+++||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+
T Consensus 310 ~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~ 388 (544)
T TIGR01842 310 LPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRE 388 (544)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHH
Confidence 11234679999999999743 34699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
.+|++++||||||.+|++|+|||+.++.+++++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||
T Consensus 389 ~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARa 468 (544)
T TIGR01842 389 TFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARA 468 (544)
T ss_pred HHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999998777789999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
++++|+|||||||||+||++++..+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 469 ll~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 469 LYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred HhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999999999999875 68999999999999999999999999999999999999863
No 60
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-76 Score=643.99 Aligned_cols=504 Identities=33% Similarity=0.433 Sum_probs=425.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 98 CFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGL 177 (1252)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~ 177 (1252)
.+++-++.++|..+.+-...++-..+|+|+..+++.|+-.+ ++|+++..+....+.+. +....+.++...+.-+.++.
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 45666777888888888899999999999999999999765 89999998888777666 44444444444444444444
Q ss_pred HHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHH
Q 000856 178 VVGF-VSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQN 256 (1252)
Q Consensus 178 ~~~~-~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~ 256 (1252)
+..+ .++|+.++++.++..+...+...+.-...+..++....+.+.-....|++-|.+|||-||+|+++.++|.++..+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~ 430 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILK 430 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHH
Confidence 4433 368888887776655544433333333333334444455555667789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 257 TLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGY 336 (1252)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ 336 (1252)
+.+..+|......+.......+..+..+....+..|+|..+.+++|+...+..+++...+|++-+...+..++++..-++
T Consensus 431 Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmE 510 (790)
T KOG0056|consen 431 YQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDME 510 (790)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHH
Confidence 99988887655555555444555555555555666778888999999877777788888899888888899999999999
Q ss_pred HHHHHHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcc
Q 000856 337 KLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERF 416 (1252)
Q Consensus 337 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~ 416 (1252)
++++++++++++.+.+. ..+.....|.|+|+||+|.|+ +++++|+||||++.||+.+|+|||||+||||++++|.|+
T Consensus 511 nmfdllkee~eVvd~P~-a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRf 587 (790)
T KOG0056|consen 511 NMFDLLKEEPEVVDLPG-APPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRF 587 (790)
T ss_pred HHHHHhhcCchhhcCCC-CCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHH
Confidence 99999999887654332 233344568899999999997 456799999999999999999999999999999999999
Q ss_pred cCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCcccc
Q 000856 417 YDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQ 496 (1252)
Q Consensus 417 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 496 (1252)
++.++|.|.+||+|+++.....+|++||.||||..|||+||..||.|++|.++++++.++++++++||.|..+|+|++|.
T Consensus 588 fdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~ 667 (790)
T KOG0056|consen 588 FDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTR 667 (790)
T ss_pred hhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeC
Q 000856 497 VGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQ 576 (1252)
Q Consensus 497 ~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 576 (1252)
+||+|-.|||||||||||||+++++|.|++|||+|||||..+++.|+.++.++..++|.|+|+||++++-+||.|+|+++
T Consensus 668 VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~ 747 (790)
T KOG0056|consen 668 VGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISN 747 (790)
T ss_pred hhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecChHHHHhc-ccchHHHHHHHHhhc
Q 000856 577 GQVVETGTHEELIAK-AGAYASLIRFQEMVR 606 (1252)
Q Consensus 577 G~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~ 606 (1252)
|+|+|.|+|+|++++ .|.|+++|+.|+.+.
T Consensus 748 G~IvErG~HeeLl~rdgG~Ya~MWq~qqa~g 778 (790)
T KOG0056|consen 748 GRIVERGRHEELLKRDGGAYADMWQAQQAMG 778 (790)
T ss_pred CeEeecCcHHHHHhccCCcHHHHHHHHHhcC
Confidence 999999999999988 799999998876654
No 61
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=3.4e-73 Score=701.51 Aligned_cols=525 Identities=25% Similarity=0.315 Sum_probs=454.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 41 MIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLR 120 (1252)
Q Consensus 41 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 120 (1252)
+.++++++++.++..+..+++++.++|.+...... ...+..+...+++++++..++.|++.+..+..+.++..++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEP----LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666666666667777889999976422111 12233445555666777888999999999999999999999
Q ss_pred HHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000856 121 KKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAF 200 (1252)
Q Consensus 121 ~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~ 200 (1252)
.+++++++++|+.+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|++++
T Consensus 81 ~~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999864 8999999999999999999999899999998888888899999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 201 AGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIAC 280 (1252)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1252)
+..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888999999999999999999999999999999999999988888877777766665555555555
Q ss_pred HHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCC
Q 000856 281 MSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDE 360 (1252)
Q Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 360 (1252)
+..+++++++++.+.+|.++.|.+++++.+......|+..+...+..+.++..+.+|+.++++.+++... .. ....+
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~-~~--~~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG-KA--PVTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Cc--CCCCC
Confidence 5555555566777779999999988877776677778888888899999999999999999985432111 11 11111
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHh
Q 000856 361 VNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLR 440 (1252)
Q Consensus 361 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~ 440 (1252)
..+.|+++||+|+|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23479999999999854 34689999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 441 DQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
++++||+|+|++|++||+|||.++.++.++++++++++.++++++++.+|+|+||.+|++|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEE
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVI 574 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l 574 (1252)
+|+++|||||||+||+++++.+.+.+.++.+++|+|+||||+++++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999985
No 62
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1e-72 Score=759.91 Aligned_cols=508 Identities=21% Similarity=0.278 Sum_probs=434.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHH
Q 000856 88 LYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFI 167 (1252)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~ 167 (1252)
.++++++++..++.++..++..+.+.+...++|.++++++++.|++||+.. ++|++++|+++|++.+++.+...+..++
T Consensus 1009 ~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~ 1087 (1522)
T TIGR00957 1009 SVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFM 1087 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777778888888888999999999999999999999999999965 7999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHH
Q 000856 168 HYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKAL 247 (1252)
Q Consensus 168 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~ 247 (1252)
..++.+++.++++++.+|.+++++++++++..++..++.+..+...+...+..+...+.+.|+++|+++||+|++|+++.
T Consensus 1088 ~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~ 1167 (1522)
T TIGR00957 1088 GSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFI 1167 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHH
Confidence 99999999988888888877666666666666666666666666666666677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 248 NSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIR-NGVTDGGKAFTAIFSAIVGGMSLGQSFSNLG 326 (1252)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (1252)
+++.+..+...+..+.......+......++..+ ++++.++..+. .+.+++|.+..++.+......++..+...+.
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~ 1244 (1522)
T TIGR00957 1168 HQSDLKVDENQKAYYPSIVANRWLAVRLECVGNC---IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSS 1244 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888777776555444443333333332222 22333444443 5789999988887777777788888888999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCCC--CcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCC
Q 000856 327 AFSKGKAAGYKLMEIIKQKPSIIQDPTNG--RCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGS 404 (1252)
Q Consensus 327 ~~~~~~~s~~ri~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 404 (1252)
.+..+..|.+|+.++++.+++.+...... ....+.++.|+|+||+|+|+++. .++|+|+||+|++||++||||+|||
T Consensus 1245 ~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGs 1323 (1522)
T TIGR00957 1245 EMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGA 1323 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCC
Confidence 99999999999999998765432111111 11123457899999999997542 3699999999999999999999999
Q ss_pred cHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHH
Q 000856 405 GKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHS 484 (1252)
Q Consensus 405 GKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~ 484 (1252)
|||||+++|.|+++|++|+|.+||+|+++++.+.+|++|++|||||.||+|||||||.... ..++++++++++.+++++
T Consensus 1324 GKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~ 1402 (1522)
T TIGR00957 1324 GKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKT 1402 (1522)
T ss_pred CHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHH
Confidence 9999999999999999999999999999999999999999999999999999999998322 578999999999999999
Q ss_pred HHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccc
Q 000856 485 FITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLST 564 (1252)
Q Consensus 485 ~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~ 564 (1252)
++..+|+|+||.+|++|.+||||||||+||||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||+++
T Consensus 1403 ~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~t 1482 (1522)
T TIGR00957 1403 FVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNT 1482 (1522)
T ss_pred HHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHH
Q 000856 565 IRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRF 601 (1252)
Q Consensus 565 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 601 (1252)
+.++|||+||++|+|+|.|+|+||+++++.|+++++.
T Consensus 1483 i~~~DrIlVld~G~IvE~G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1483 IMDYTRVIVLDKGEVAEFGAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HHhCCEEEEEECCEEEEECCHHHHHhCCCHHHHHHHH
Confidence 9999999999999999999999999998999988764
No 63
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.4e-72 Score=689.07 Aligned_cols=529 Identities=23% Similarity=0.271 Sum_probs=448.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 45 SLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYL 124 (1252)
Q Consensus 45 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~ 124 (1252)
++++++..+.....+++++.++|...... +. ..+..+.+.++++.++..++.+++.++....+.++..++|.+++
T Consensus 12 ~~~~~~~~~~~l~~p~~~~~iid~~~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 86 (544)
T TIGR01842 12 GLFSFVINILMLAPPLYMLQVYDRVLTSG-SV----PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIF 86 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCC-ch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333446788888765321 11 12333444455556667788899999999999999999999999
Q ss_pred HHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000856 125 EAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISE-KVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGG 203 (1252)
Q Consensus 125 ~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~ 203 (1252)
++++++|+. ..+...+++++|++.+++++.. .+..++..++.++ .++++++++|.+++++++.+|+++++..
T Consensus 87 ~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~ 159 (544)
T TIGR01842 87 AASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLAL 159 (544)
T ss_pred HHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999983 2356788899999999998877 4555555555544 4467889999999988888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 204 LYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSW 283 (1252)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1252)
++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+..+....+..++..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (544)
T TIGR01842 160 LNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQ 239 (544)
T ss_pred HhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888899999999999999999999999999999999999999888888777777776666666666666
Q ss_pred HHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcc
Q 000856 284 ALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNG 363 (1252)
Q Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~ 363 (1252)
++++++|++++.+|.+|+|.+++++.+......|+..+...+..+.+++.+.+|+.++++.+++.+. . ...+...+
T Consensus 240 ~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-~---~~~~~~~~ 315 (544)
T TIGR01842 240 SLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP-A---MPLPEPEG 315 (544)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC-C---CCCCCCCC
Confidence 7788899999999999999999888777777789999999999999999999999999986544211 1 11112235
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+++.+.+|+++
T Consensus 316 ~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i 394 (544)
T TIGR01842 316 HLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHI 394 (544)
T ss_pred eEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhhe
Confidence 69999999999743 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPK 523 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ 523 (1252)
+||||+|++|++|++||+.++.++.++++++++++.++++++++.+|+|++|.+|++|.+||||||||++||||++++|+
T Consensus 395 ~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ 474 (544)
T TIGR01842 395 GYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPK 474 (544)
T ss_pred EEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998777788899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHh
Q 000856 524 ILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 524 illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|||||||+||+++++.+.+.+.++. +++|+|+||||++.+..||+|++|++|++++.|+|+|+++
T Consensus 475 ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 475 LVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999999999885 6899999999999988899999999999999999999864
No 64
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-74 Score=717.91 Aligned_cols=500 Identities=26% Similarity=0.393 Sum_probs=369.4
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCcccc----------
Q 000856 364 NIEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIK---------- 432 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~---------- 432 (1252)
.|+++|++++|++.. +.++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 589999999996322 246999999999999999999999999999999999999999999999987542
Q ss_pred CCCHH---HHh-hhceEEccCC--CCchh-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCcc---ccccC
Q 000856 433 TLQLR---WLR-DQIGLVNQEP--ALFAT-TILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYS---TQVGE 499 (1252)
Q Consensus 433 ~~~~~---~~~-~~i~~v~Q~~--~l~~~-tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~ 499 (1252)
+.+.. .+| ++|+||+|+| .+++. ||+||+.++.. .....+.. ..+.+.++.+ |+. ....+
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 12222 233 4799999998 56664 99999987521 11111111 1122334444 552 34577
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-C-CCeEEEEccCccchhc-cCEEEEEeC
Q 000856 500 RGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-V-GRTTVVVAHRLSTIRN-VDTVAVIQQ 576 (1252)
Q Consensus 500 ~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~ 576 (1252)
...+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.++++. + |+|+|+|||+++.+.. ||||++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 888999999999999999999999999999999999999999999999985 3 8999999999999866 899999999
Q ss_pred CEEEEecChHHHHhccc-chHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccc
Q 000856 577 GQVVETGTHEELIAKAG-AYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIE 655 (1252)
Q Consensus 577 G~i~~~g~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (1252)
|++++.|+++++..... .|..-.. ...+
T Consensus 245 G~i~~~g~~~~~~~~~~~~~~~~l~------------------------~~~~--------------------------- 273 (623)
T PRK10261 245 GEAVETGSVEQIFHAPQHPYTRALL------------------------AAVP--------------------------- 273 (623)
T ss_pred CeecccCCHHHhhcCCCChhhhhhh------------------------hccC---------------------------
Confidence 99999999877643210 0000000 0000
Q ss_pred cccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHH
Q 000856 656 MVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYI 735 (1252)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1252)
..... .. .
T Consensus 274 ---~~~~~------------------------------------------------------~~-~-------------- 281 (623)
T PRK10261 274 ---QLGAM------------------------------------------------------KG-L-------------- 281 (623)
T ss_pred ---ccccc------------------------------------------------------cc-c--------------
Confidence 00000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHH
Q 000856 736 GAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNM 815 (1252)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~ 815 (1252)
..+ .-+.. .
T Consensus 282 -------------------------------------~~~-~~~~~----~----------------------------- 290 (623)
T PRK10261 282 -------------------------------------DYP-RRFPL----I----------------------------- 290 (623)
T ss_pred -------------------------------------cCC-ccccc----c-----------------------------
Confidence 000 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHH
Q 000856 816 TSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLF 895 (1252)
Q Consensus 816 ~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~ 895 (1252)
T Consensus 291 -------------------------------------------------------------------------------- 290 (623)
T PRK10261 291 -------------------------------------------------------------------------------- 290 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 896 CHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIR 975 (1252)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1252)
T Consensus 291 -------------------------------------------------------------------------------- 290 (623)
T PRK10261 291 -------------------------------------------------------------------------------- 290 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCC--------CccceeeeeEEEeCCcEEEEEcCC
Q 000856 976 GGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRP--------DVVVFKDFNLRIRAGQSQALVGAS 1047 (1252)
Q Consensus 976 ~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIvG~S 1047 (1252)
................. .....-++++||+++|+.+. ..++|+|+||+|++||++||+|+|
T Consensus 291 ---------~~~~~~~~~~~~~~~~~--~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~n 359 (623)
T PRK10261 291 ---------SLEHPAKQEPPIEQDTV--VDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGES 359 (623)
T ss_pred ---------ccccccccCcccccccc--cCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCC
Confidence 00000000000000000 00112499999999996311 236999999999999999999999
Q ss_pred CCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHhcccEEEccccc--cCc-ccHHHHhccCC--CCC-C----
Q 000856 1048 GSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLRLKIGLVQQEPA--LFA-ASIFDNIAYGK--EGA-T---- 1114 (1252)
Q Consensus 1048 GSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~~i~~VpQd~~--lf~-gTIreNl~~~~--~~~-~---- 1114 (1252)
|||||||+++|+|+.+|++|+|.++|.++...+.. .+|++|+||||+|. ++. .|+++|+.++. ... .
T Consensus 360 GsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~ 439 (623)
T PRK10261 360 GSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAA 439 (623)
T ss_pred CCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999877643 46788999999983 654 69999997531 111 1
Q ss_pred HHHHHHHHHHcCch-hhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHH
Q 000856 1115 EAEVVEAARAANVH-GFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALER 1193 (1252)
Q Consensus 1115 deei~~al~~~~l~-~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~ 1193 (1252)
.+++.++++.+++. +..... + ..||||||||++|||||+.+|++||||||||+||+.+...+.+.|++
T Consensus 440 ~~~~~~~L~~~gL~~~~~~~~-------~----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~ 508 (623)
T PRK10261 440 AARVAWLLERVGLLPEHAWRY-------P----HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD 508 (623)
T ss_pred HHHHHHHHHHcCCCHHHhhCC-------c----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 24566777777774 333322 2 46999999999999999999999999999999999999999999988
Q ss_pred HcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCchhHH-HHH
Q 000856 1194 LMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDGAYSR-LLQ 1246 (1252)
Q Consensus 1194 ~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~-l~~ 1246 (1252)
+.+ +.|||+|||+++.+.. ||||++|++|+|++.|++++++.++...|.+ ++.
T Consensus 509 l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 509 LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 753 7899999999999865 8999999999999999999998776666754 443
No 65
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-74 Score=707.01 Aligned_cols=459 Identities=23% Similarity=0.420 Sum_probs=358.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC--CCcEEEECCccccCCCHHH-Hh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP--NAGHVLLDNVDIKTLQLRW-LR 440 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~~ 440 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... ++
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 3599999999999999999999999999999999999996 8999999999997766543 45
Q ss_pred hhceEEccCCCCchh-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 441 DQIGLVNQEPALFAT-TILENILYGKPE-----ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~-tv~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
++++||+|++.++.. |++||+.++... ...++... .+.+.++.+ |+.........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 679999999988865 999999886421 11111111 123445554 66666677888999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
||||+.+|++|||||||++||+.++..+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|+++..|+.+++....
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 234 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTEDD 234 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHHH
Confidence 999999999999999999999999999999999874 48899999999999876 8999999999999877543221000
Q ss_pred cchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchH
Q 000856 593 GAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGY 672 (1252)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1252)
.
T Consensus 235 -----~-------------------------------------------------------------------------- 235 (506)
T PRK13549 235 -----I-------------------------------------------------------------------------- 235 (506)
T ss_pred -----H--------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
+..+
T Consensus 236 ---------------------------------------~~~~------------------------------------- 239 (506)
T PRK13549 236 ---------------------------------------ITMM------------------------------------- 239 (506)
T ss_pred ---------------------------------------HHHh-------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
...+..
T Consensus 240 -------------------~~~~~~------------------------------------------------------- 245 (506)
T PRK13549 240 -------------------VGRELT------------------------------------------------------- 245 (506)
T ss_pred -------------------hCcCcc-------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
T Consensus 246 -------------------------------------------------------------------------------- 245 (506)
T PRK13549 246 -------------------------------------------------------------------------------- 245 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTR 992 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 992 (1252)
...+.
T Consensus 246 ---------------------------------------------------------------------------~~~~~ 250 (506)
T PRK13549 246 ---------------------------------------------------------------------------ALYPR 250 (506)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00000
Q ss_pred CCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-CCCceEEE
Q 000856 993 IDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-PTAGKVMI 1071 (1252)
Q Consensus 993 ~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-p~~G~I~i 1071 (1252)
..+ + +...-|+++|++++|+...+.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+
T Consensus 251 ~~~--~------~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~ 322 (506)
T PRK13549 251 EPH--T------IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFI 322 (506)
T ss_pred ccc--C------CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEE
Confidence 000 0 01124899999999953223469999999999999999999999999999999999999 59999999
Q ss_pred CCcccCCCCH-HHHhcccEEEcccc---ccC-cccHHHHhccCCC----C---CCH----HHHHHHHHHcCchhhHhhCC
Q 000856 1072 DGKDIRRLNL-KSLRLKIGLVQQEP---ALF-AASIFDNIAYGKE----G---ATE----AEVVEAARAANVHGFVSALP 1135 (1252)
Q Consensus 1072 dG~di~~~~~-~~lR~~i~~VpQd~---~lf-~gTIreNl~~~~~----~---~~d----eei~~al~~~~l~~~i~~lp 1135 (1252)
+|.++...+. +.+|++++||||++ .+| ..|+.||+.++.. . .+. +++.++++..++.+
T Consensus 323 ~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------ 396 (506)
T PRK13549 323 DGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT------ 396 (506)
T ss_pred CCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC------
Confidence 9999875543 44677899999996 355 4699999976421 0 111 23445555555421
Q ss_pred CcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-c
Q 000856 1136 NAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-V 1213 (1252)
Q Consensus 1136 ~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~ 1213 (1252)
+-.+.++ ..||||||||++||||++.+|+||||||||++||+.+.+.+++.|+++. +++|||+|||+++.+.. |
T Consensus 397 ~~~~~~~----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~ 472 (506)
T PRK13549 397 ASPELAI----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLS 472 (506)
T ss_pred CCccccc----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhC
Confidence 1123333 4699999999999999999999999999999999999999999998874 48899999999998865 8
Q ss_pred CEEEEEeCCEEEEecChhhhh
Q 000856 1214 DCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1214 DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|++++|++|+++..|+++++.
T Consensus 473 d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 473 DRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred CEEEEEECCEEEEEeccccCC
Confidence 999999999999999988764
No 66
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.4e-71 Score=744.28 Aligned_cols=507 Identities=21% Similarity=0.263 Sum_probs=401.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHH
Q 000856 86 YALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGN 165 (1252)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~ 165 (1252)
+.+++++++++..++.+++.++..+.+.+...++|.+++++++++|++||+.. ++|++++|+++|++.+++.+...+..
T Consensus 955 ~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~ 1033 (1622)
T PLN03130 955 YNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNM 1033 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456667777788889999999999999999999999999999999999965 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchH
Q 000856 166 FIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAF-AGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGES 244 (1252)
Q Consensus 166 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 244 (1252)
++..++.+++.++++++++|.. ++.++.++++++ +..++.+..++..+......+...+.+.|+++|+++||+|++++
T Consensus 1034 ~~~~~~~~i~~~i~i~~~~~~~-~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~ 1112 (1622)
T PLN03130 1034 FLGQIFQLLSTFVLIGIVSTIS-LWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD 1112 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHH
Confidence 9999988888888888887733 322222222222 22333344444444444556677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc---------cCHHHHHHHHHHHHHHH
Q 000856 245 KALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGV---------TDGGKAFTAIFSAIVGG 315 (1252)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---------~~~~~~~~~~~~~~~~~ 315 (1252)
++.+++.+..+...+..+.......+......++ ..+++++.+...+..+. .+.|.+++ +.+...
T Consensus 1113 ~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls---~~~~~~ 1186 (1622)
T PLN03130 1113 RMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETL---GGLMIWLTASFAVMQNGRAENQAAFASTMGLLLS---YALNIT 1186 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccccccchhhhHHHHHHHH---HHHHHH
Confidence 8877766655554433222111111111111111 11122222333343321 12232222 223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC--CCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCC
Q 000856 316 MSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPT--NGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAG 393 (1252)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g 393 (1252)
.++..+......+..+..|.+|+.++++.+++.+.... ......+..+.|+|+||+|+|++. ..++|+|+||+|++|
T Consensus 1187 ~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~G 1265 (1622)
T PLN03130 1187 SLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPS 1265 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCC
Confidence 44555556667778999999999999987655321111 111112345789999999999643 246999999999999
Q ss_pred CEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHH
Q 000856 394 KTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEV 473 (1252)
Q Consensus 394 ~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~ 473 (1252)
|++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++|++|||||.||+|||||||.++. ..+++++
T Consensus 1266 ekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei 1344 (1622)
T PLN03130 1266 EKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADL 1344 (1622)
T ss_pred CEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876 4689999
Q ss_pred HHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCC
Q 000856 474 EAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGR 553 (1252)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~ 553 (1252)
+++++.+++++++..+|+|+||.+|++|.+||||||||+||||||+++|+|||||||||+||+++++.+++.|++..+++
T Consensus 1345 ~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~ 1424 (1622)
T PLN03130 1345 WESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSC 1424 (1622)
T ss_pred HHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred eEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc-ccchHHHHHHH
Q 000856 554 TTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK-AGAYASLIRFQ 602 (1252)
Q Consensus 554 tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 602 (1252)
|+|+||||++++.+||||+||++|+|+|.|+|+||+++ ++.|+++++..
T Consensus 1425 TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~ 1474 (1622)
T PLN03130 1425 TMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQST 1474 (1622)
T ss_pred EEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHc
Confidence 99999999999999999999999999999999999987 58899888654
No 67
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.9e-74 Score=704.94 Aligned_cols=469 Identities=27% Similarity=0.448 Sum_probs=360.8
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCCCHH
Q 000856 364 NIEFKNVTFSYPSR-PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTLQLR 437 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 437 (1252)
.++++|++++|++. ....+|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 124699999999999999999999999999999999999986 799999999998776543
Q ss_pred ---HHh-hhceEEccCCC--Cch-hcHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccc---cccCCCCCC
Q 000856 438 ---WLR-DQIGLVNQEPA--LFA-TTILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYST---QVGERGVQL 504 (1252)
Q Consensus 438 ---~~~-~~i~~v~Q~~~--l~~-~tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~g~~L 504 (1252)
.+| ++++|++|++. +++ .|+++|+.++.. .....+.. ..+.+.++.+ |+.. ...+...+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 233 57999999985 444 489999864210 11111111 1122334443 4432 346678899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEE
Q 000856 505 SGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVE 581 (1252)
Q Consensus 505 SgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~ 581 (1252)
||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|+|||+++.+.. ||||++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999874 37999999999999876 89999999999999
Q ss_pred ecChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccc
Q 000856 582 TGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAE 661 (1252)
Q Consensus 582 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1252)
.|+++++..... .
T Consensus 238 ~g~~~~~~~~~~----------------------------------------------------------~--------- 250 (529)
T PRK15134 238 QNRAATLFSAPT----------------------------------------------------------H--------- 250 (529)
T ss_pred eCCHHHHhhCCC----------------------------------------------------------C---------
Confidence 888766532100 0
Q ss_pred cccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHH
Q 000856 662 TDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYA 741 (1252)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1252)
.+.+
T Consensus 251 ----------~~~~------------------------------------------------------------------ 254 (529)
T PRK15134 251 ----------PYTQ------------------------------------------------------------------ 254 (529)
T ss_pred ----------HHHH------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 742 VVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTS 821 (1252)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~ 821 (1252)
.+++ .+ +
T Consensus 255 ------------------------~~~~----~~-------~-------------------------------------- 261 (529)
T PRK15134 255 ------------------------KLLN----SE-------P-------------------------------------- 261 (529)
T ss_pred ------------------------HHHH----hC-------c--------------------------------------
Confidence 0000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHh
Q 000856 822 FIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRV 901 (1252)
Q Consensus 822 ~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~ 901 (1252)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 902 PQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVG 981 (1252)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 981 (1252)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCC--------CCccceeeeeEEEeCCcEEEEEcCCCCChHH
Q 000856 982 SVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSR--------PDVVVFKDFNLRIRAGQSQALVGASGSGKSS 1053 (1252)
Q Consensus 982 ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKST 1053 (1252)
...+. .+. . +...-|+++|++++|+.. .+.++|+|+||+|++||++||+|+|||||||
T Consensus 262 ------~~~~~-~~~-~------~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKST 327 (529)
T PRK15134 262 ------SGDPV-PLP-E------PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKST 327 (529)
T ss_pred ------ccccc-ccC-C------CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHH
Confidence 00000 000 0 001148999999999521 1246999999999999999999999999999
Q ss_pred HHHHHhccCCCCCceEEECCcccCCCCHHH---HhcccEEEcccc--ccCc-ccHHHHhccCCC----CCC----HHHHH
Q 000856 1054 VIALIERFYDPTAGKVMIDGKDIRRLNLKS---LRLKIGLVQQEP--ALFA-ASIFDNIAYGKE----GAT----EAEVV 1119 (1252)
Q Consensus 1054 Ll~lL~rl~~p~~G~I~idG~di~~~~~~~---lR~~i~~VpQd~--~lf~-gTIreNl~~~~~----~~~----deei~ 1119 (1252)
|+++|+|++ |++|+|.+||.++...+... +|++++||||++ .+|. .|++||+.++.. ... ++.+.
T Consensus 328 Llk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 406 (529)
T PRK15134 328 TGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVI 406 (529)
T ss_pred HHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHH
Confidence 999999998 58999999999998766543 478899999998 3665 599999976411 011 23456
Q ss_pred HHHHHcCch-hhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--C
Q 000856 1120 EAARAANVH-GFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--R 1196 (1252)
Q Consensus 1120 ~al~~~~l~-~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~ 1196 (1252)
++++..++. +.... ....||||||||++|||||+.+|++|||||||++||+.+...+++.|++.. .
T Consensus 407 ~~l~~~~l~~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~ 475 (529)
T PRK15134 407 AVMEEVGLDPETRHR-----------YPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKH 475 (529)
T ss_pred HHHHHcCCCHHHHhc-----------CCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhh
Confidence 667777764 22222 234699999999999999999999999999999999999999999999875 2
Q ss_pred CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCchh
Q 000856 1197 GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDGAY 1241 (1252)
Q Consensus 1197 ~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g~y 1241 (1252)
++|||+|||+++.+.. ||+|++|++|+|++.|+++++++.+...|
T Consensus 476 ~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 521 (529)
T PRK15134 476 QLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQQEY 521 (529)
T ss_pred CCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCCChH
Confidence 7899999999998865 89999999999999999999987644444
No 68
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-73 Score=696.33 Aligned_cols=456 Identities=21% Similarity=0.379 Sum_probs=355.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 442 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 35899999999999999999999999999999999999999999999999998776554 3457
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCC---------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHH
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEA---------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRI 512 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv 512 (1252)
++||+|++.++.. |++||+.++.... ...+.. ..+.+.++.+ |+....++...+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988865 9999998763210 111111 1123344444 666566778889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 513 AIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 513 ~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
+|||||+.+|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999999885 48999999999999976 89999999999998876554311
Q ss_pred cccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCc
Q 000856 591 KAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPD 670 (1252)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (1252)
.. ...
T Consensus 235 ~~-----~~~---------------------------------------------------------------------- 239 (510)
T PRK09700 235 DD-----IVR---------------------------------------------------------------------- 239 (510)
T ss_pred HH-----HHH----------------------------------------------------------------------
Confidence 00 000
Q ss_pred hHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 671 GYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHY 750 (1252)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1252)
..
T Consensus 240 -------------------------------------------~~----------------------------------- 241 (510)
T PRK09700 240 -------------------------------------------LM----------------------------------- 241 (510)
T ss_pred -------------------------------------------Hh-----------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 751 FFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEW 830 (1252)
Q Consensus 751 ~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 830 (1252)
+..... .+
T Consensus 242 ----------------------------~~~~~~------~~-------------------------------------- 249 (510)
T PRK09700 242 ----------------------------VGRELQ------NR-------------------------------------- 249 (510)
T ss_pred ----------------------------cCCCcc------cc--------------------------------------
Confidence 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHH
Q 000856 831 RVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRS 910 (1252)
Q Consensus 831 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1252)
T Consensus 250 -------------------------------------------------------------------------------- 249 (510)
T PRK09700 250 -------------------------------------------------------------------------------- 249 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000856 911 LTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRS 990 (1252)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~ 990 (1252)
.....
T Consensus 250 ---------------------------------------------------------------------------~~~~~ 254 (510)
T PRK09700 250 ---------------------------------------------------------------------------FNAMK 254 (510)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00000
Q ss_pred CCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEE
Q 000856 991 TRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVM 1070 (1252)
Q Consensus 991 ~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~ 1070 (1252)
+. +..+ ..+..++++|+++.|. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.
T Consensus 255 ~~--~~~~------~~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~ 321 (510)
T PRK09700 255 EN--VSNL------AHETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIR 321 (510)
T ss_pred cc--cccC------CCCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEE
Confidence 00 0000 0012499999998762 289999999999999999999999999999999999999999999
Q ss_pred ECCcccCCCCH-HHHhcccEEEcccc---ccCc-ccHHHHhccCCCC-----------CC----HHHHHHHHHHcCchhh
Q 000856 1071 IDGKDIRRLNL-KSLRLKIGLVQQEP---ALFA-ASIFDNIAYGKEG-----------AT----EAEVVEAARAANVHGF 1130 (1252)
Q Consensus 1071 idG~di~~~~~-~~lR~~i~~VpQd~---~lf~-gTIreNl~~~~~~-----------~~----deei~~al~~~~l~~~ 1130 (1252)
++|.++...+. ..+|++++||||++ .+|. -|+++|+.++... .. .+++.++++..++.
T Consensus 322 ~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-- 399 (510)
T PRK09700 322 LNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALK-- 399 (510)
T ss_pred ECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCC--
Confidence 99999876543 45678899999984 4665 5999999864210 01 12344555555542
Q ss_pred HhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchh
Q 000856 1131 VSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLST 1209 (1252)
Q Consensus 1131 i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t 1209 (1252)
++..+.++ ..||||||||++|||||+++|+||||||||++||+.+...+.+.|+++. +++|||+|||+++.
T Consensus 400 ----~~~~~~~~----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~ 471 (510)
T PRK09700 400 ----CHSVNQNI----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPE 471 (510)
T ss_pred ----CCCccCcc----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 02234444 3599999999999999999999999999999999999999999998864 57899999999998
Q ss_pred hh-ccCEEEEEeCCEEEEecChhh
Q 000856 1210 IR-GVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1210 i~-~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
+. .||+|++|++|++++.+++.+
T Consensus 472 ~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 472 IITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHhhCCEEEEEECCEEEEEecCcc
Confidence 75 589999999999999887633
No 69
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.6e-70 Score=733.67 Aligned_cols=509 Identities=20% Similarity=0.239 Sum_probs=414.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000856 91 VYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYL 170 (1252)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~ 170 (1252)
++++++..++.++..+.....+.+...++|.++++++++.|+.||+.. ++|+++||+++|++.+++.+...+..++..+
T Consensus 1005 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~ 1083 (1560)
T PTZ00243 1005 LGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCL 1083 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555555556677788999999999999999999965 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHH
Q 000856 171 STFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSY 250 (1252)
Q Consensus 171 ~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~ 250 (1252)
+.+++.++++++.+|.+.++++.++.+...+..++.+..++..+......+...+.+.|++.|+++||+|+.++.+.+++
T Consensus 1084 ~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~ 1163 (1560)
T PTZ00243 1084 FSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEA 1163 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHH
Confidence 99998888888888854433332222333344455555566655566677788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 251 SDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGV--FIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAF 328 (1252)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (1252)
.+..++..+..++......+......++..+..+++.+++.. ....+.+++|.+..++.+......++..+...+..+
T Consensus 1164 ~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~l 1243 (1560)
T PTZ00243 1164 LRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATV 1243 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777666554444444433344433333333333333 223445678876666666666667888888888999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCC--------------------------CCCCC---cCCCCcccEEEEeEEEECCCCCC
Q 000856 329 SKGKAAGYKLMEIIKQKPSIIQD--------------------------PTNGR---CLDEVNGNIEFKNVTFSYPSRPD 379 (1252)
Q Consensus 329 ~~~~~s~~ri~~~l~~~~~~~~~--------------------------~~~~~---~~~~~~~~i~~~~v~~~y~~~~~ 379 (1252)
..+..|.+|+.++++..++.+.. +.... +..+..+.|+|+||+|+|++. .
T Consensus 1244 e~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~ 1322 (1560)
T PTZ00243 1244 EADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-L 1322 (1560)
T ss_pred HHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-C
Confidence 99999999999999743321100 00000 011234679999999999753 3
Q ss_pred CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHH
Q 000856 380 VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILE 459 (1252)
Q Consensus 380 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ 459 (1252)
.++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++|+||||||.||++||||
T Consensus 1323 ~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIre 1402 (1560)
T PTZ00243 1323 PLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQ 1402 (1560)
T ss_pred CceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHH
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCCCCCCChHh
Q 000856 460 NILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN-PKILLLDEATSALDAGS 538 (1252)
Q Consensus 460 ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~-~~illlDEpts~LD~~~ 538 (1252)
||..+. ..++++++++++.+++++++..+|+|+||.+|++|.+||||||||++|||||+++ |+|||||||||+||+++
T Consensus 1403 NIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~t 1481 (1560)
T PTZ00243 1403 NVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPAL 1481 (1560)
T ss_pred HhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHH
Confidence 998653 5789999999999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc-ccchHHHHHHH
Q 000856 539 ESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK-AGAYASLIRFQ 602 (1252)
Q Consensus 539 ~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 602 (1252)
++.+++.|++..+++|+|+||||++++.+||+|+||++|+|++.|+|+||+++ ++.|+++++.+
T Consensus 1482 e~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1482 DRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 99999999998889999999999999999999999999999999999999975 78899887654
No 70
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.1e-73 Score=692.63 Aligned_cols=451 Identities=24% Similarity=0.387 Sum_probs=352.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 442 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 35899999999999999999999999999999999999999999999999986654433 3567
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEA------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
++|++|++.++.. |++||+.++.... ...+... .+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988865 9999999864211 1111111 123344444 666556777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhccc
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKAG 593 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 593 (1252)
|||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++....
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~- 232 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTEDS- 232 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHHH-
Confidence 99999999999999999999999999999999874 47899999999999876 8999999999998876543220000
Q ss_pred chHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchHH
Q 000856 594 AYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYF 673 (1252)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1252)
+
T Consensus 233 ----~--------------------------------------------------------------------------- 233 (501)
T PRK10762 233 ----L--------------------------------------------------------------------------- 233 (501)
T ss_pred ----H---------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 674 LRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFS 753 (1252)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1252)
....
T Consensus 234 --------------------------------------~~~~-------------------------------------- 237 (501)
T PRK10762 234 --------------------------------------IEMM-------------------------------------- 237 (501)
T ss_pred --------------------------------------HHHh--------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 754 IMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVS 833 (1252)
Q Consensus 754 ~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 833 (1252)
+.. .
T Consensus 238 -------------------------~~~-~-------------------------------------------------- 241 (501)
T PRK10762 238 -------------------------VGR-K-------------------------------------------------- 241 (501)
T ss_pred -------------------------cCC-C--------------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000856 834 LLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTA 913 (1252)
Q Consensus 834 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1252)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000856 914 GILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRI 993 (1252)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~ 993 (1252)
....
T Consensus 242 -------------------------------------------------------------------------~~~~--- 245 (501)
T PRK10762 242 -------------------------------------------------------------------------LEDQ--- 245 (501)
T ss_pred -------------------------------------------------------------------------cccc---
Confidence 0000
Q ss_pred CCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECC
Q 000856 994 DPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDG 1073 (1252)
Q Consensus 994 ~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG 1073 (1252)
.+..+ . .+.+.-++++|+++ ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 246 ~~~~~-~---~~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g 313 (501)
T PRK10762 246 YPRLD-K---APGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDG 313 (501)
T ss_pred ccccc-c---CCCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECC
Confidence 00000 0 00012489999984 269999999999999999999999999999999999999999999999
Q ss_pred cccCCCCH-HHHhcccEEEcccc---ccC-cccHHHHhccCCC----C----CC----HHHHHHHHHHcCchhhHhhCCC
Q 000856 1074 KDIRRLNL-KSLRLKIGLVQQEP---ALF-AASIFDNIAYGKE----G----AT----EAEVVEAARAANVHGFVSALPN 1136 (1252)
Q Consensus 1074 ~di~~~~~-~~lR~~i~~VpQd~---~lf-~gTIreNl~~~~~----~----~~----deei~~al~~~~l~~~i~~lp~ 1136 (1252)
.++...+. +.+|++++||||++ .+| ..|+++|+.++.. . .+ ++++.++++..++.+ +
T Consensus 314 ~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~ 387 (501)
T PRK10762 314 HEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------P 387 (501)
T ss_pred EECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------C
Confidence 99977665 34678899999997 344 5799999976421 0 11 223445555555420 1
Q ss_pred cCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cC
Q 000856 1137 AYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VD 1214 (1252)
Q Consensus 1137 gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~D 1214 (1252)
-.+.++ ..||||||||++|||||+.+|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||
T Consensus 388 ~~~~~~----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d 463 (501)
T PRK10762 388 SMEQAI----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSD 463 (501)
T ss_pred CccCch----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCC
Confidence 123333 4699999999999999999999999999999999999999999999875 47899999999998854 89
Q ss_pred EEEEEeCCEEEEecChhhhh
Q 000856 1215 CIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1215 rI~vl~~G~Ive~G~~~eLl 1234 (1252)
+|++|++|+++..|+++++.
T Consensus 464 ~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 464 RILVMHEGRISGEFTREQAT 483 (501)
T ss_pred EEEEEECCEEEEEeccccCC
Confidence 99999999999999887763
No 71
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2e-70 Score=736.86 Aligned_cols=510 Identities=20% Similarity=0.282 Sum_probs=403.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHH
Q 000856 86 YALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGN 165 (1252)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~ 165 (1252)
|...+++++++..++.+++.++..+.+.+...++|.+++++++++|++||+.+ ++|++++|+++|++.+++.+...+..
T Consensus 952 ~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~ 1030 (1495)
T PLN03232 952 YIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNM 1030 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHH
Confidence 45556677777888889999999999999999999999999999999999965 79999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchH
Q 000856 166 FIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAG-GLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGES 244 (1252)
Q Consensus 166 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 244 (1252)
++..++.+++.+++++++++.. ++.++.+++++.+. .++.+..++..+......+...+.+.|+++|+++||+|++++
T Consensus 1031 ~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~ 1109 (1495)
T PLN03232 1031 FMNQLWQLLSTFALIGTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYD 1109 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHH
Confidence 9988888888777777776533 22222222222222 223333344555555666778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CccC-----HHHHHHHHHHHHHHHHHH
Q 000856 245 KALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRN-GVTD-----GGKAFTAIFSAIVGGMSL 318 (1252)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~-----~~~~~~~~~~~~~~~~~l 318 (1252)
++.+++.+..+...+..+.......+..... ..+..+++++.+...+.. +.+. .+.+..++.+......++
T Consensus 1110 ~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l 1186 (1495)
T PLN03232 1110 RMAKINGKSMDNNIRFTLANTSSNRWLTIRL---ETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLL 1186 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHH
Confidence 8877776665555444332221111111111 111112222233333332 3221 111111222333334466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCC--CCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEE
Q 000856 319 GQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTN--GRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTV 396 (1252)
Q Consensus 319 ~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~ 396 (1252)
..+...+..+..+..|.+|+.++++.+++.+..... .....+..+.|+|+||+|+|+++ .+++|+|+||+|++||++
T Consensus 1187 ~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~Gekv 1265 (1495)
T PLN03232 1187 SGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKV 1265 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEE
Confidence 677777888899999999999999876553211111 11112345679999999999643 246999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHH
Q 000856 397 AVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAA 476 (1252)
Q Consensus 397 ~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~ 476 (1252)
||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++|+||||||.||++||||||.++. ..++++++++
T Consensus 1266 aIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~a 1344 (1495)
T PLN03232 1266 GVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEA 1344 (1495)
T ss_pred EEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999875 5789999999
Q ss_pred HHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEE
Q 000856 477 ASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTV 556 (1252)
Q Consensus 477 ~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi 556 (1252)
++.++++++++.+|+|+||.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|
T Consensus 1345 l~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI 1424 (1495)
T PLN03232 1345 LERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTML 1424 (1495)
T ss_pred HHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred EEccCccchhccCEEEEEeCCEEEEecChHHHHhcc-cchHHHHHHH
Q 000856 557 VVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKA-GAYASLIRFQ 602 (1252)
Q Consensus 557 ~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~~~~ 602 (1252)
+||||++++.+||+|+||++|+|+|.|+|+||++++ +.|+++++.+
T Consensus 1425 ~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~ 1471 (1495)
T PLN03232 1425 VIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHST 1471 (1495)
T ss_pred EEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999887 4898887654
No 72
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=7e-73 Score=695.32 Aligned_cols=457 Identities=25% Similarity=0.447 Sum_probs=351.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhccc--CCCCcEEEEC---------------
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFY--DPNAGHVLLD--------------- 427 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~--~~~~G~i~~~--------------- 427 (1252)
|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 478999999963 35899999999999999999999999999999999996 7999999997
Q ss_pred --------Ccccc-------CCC---HHHHhhhceEEccC-CCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHH
Q 000856 428 --------NVDIK-------TLQ---LRWLRDQIGLVNQE-PALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSF 485 (1252)
Q Consensus 428 --------g~~~~-------~~~---~~~~~~~i~~v~Q~-~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~ 485 (1252)
|.++. ..+ ...+|+.++|++|+ +.+++. |++||+.++... ....+.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33221 111 12356789999998 567764 999999875321 1111111 112334
Q ss_pred HhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCcc
Q 000856 486 ITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLS 563 (1252)
Q Consensus 486 ~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~ 563 (1252)
++.+ |++....+...+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|||+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 4444 66666677788999999999999999999999999999999999999999999999884 3899999999999
Q ss_pred chhc-cCEEEEEeCCEEEEecChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccC
Q 000856 564 TIRN-VDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNL 642 (1252)
Q Consensus 564 ~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (1252)
.+.. ||+|++|++|+++..|+++++.... .
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~------~------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAVF------M------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHHH------H-------------------------------------------
Confidence 9976 8999999999998776554331100 0
Q ss_pred CccccCCCCcccccccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 000856 643 SYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPAS 722 (1252)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1252)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHH
Q 000856 723 MERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKS 802 (1252)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~ 802 (1252)
. +
T Consensus 262 ---------------------------------------------------------~---------------~------ 263 (520)
T TIGR03269 262 ---------------------------------------------------------E---------------G------ 263 (520)
T ss_pred ---------------------------------------------------------h---------------h------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHH
Q 000856 803 AIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTV 882 (1252)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tI 882 (1252)
+ ..
T Consensus 264 ---------------------------~------------------------~~-------------------------- 266 (520)
T TIGR03269 264 ---------------------------V------------------------SE-------------------------- 266 (520)
T ss_pred ---------------------------c------------------------hh--------------------------
Confidence 0 00
Q ss_pred HHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 000856 883 AAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANS 962 (1252)
Q Consensus 883 ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~ 962 (1252)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCC--CCCccceeeeeEEEeCCcE
Q 000856 963 VAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPS--RPDVVVFKDFNLRIRAGQS 1040 (1252)
Q Consensus 963 ~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~--~~~~~vL~~isl~I~~Ge~ 1040 (1252)
...... .+ . ...-++++||+++|++ +...++|+|+||+|++||+
T Consensus 267 ------------------------~~~~~~-~~---~------~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~ 312 (520)
T TIGR03269 267 ------------------------VEKECE-VE---V------GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEI 312 (520)
T ss_pred ------------------------hccccc-cC---C------CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCE
Confidence 000000 00 0 0124999999999953 1124699999999999999
Q ss_pred EEEEcCCCCChHHHHHHHhccCCCCCceEEEC-Ccc---cCCCC---HHHHhcccEEEccccccCc-ccHHHHhccCCC-
Q 000856 1041 QALVGASGSGKSSVIALIERFYDPTAGKVMID-GKD---IRRLN---LKSLRLKIGLVQQEPALFA-ASIFDNIAYGKE- 1111 (1252)
Q Consensus 1041 vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~id-G~d---i~~~~---~~~lR~~i~~VpQd~~lf~-gTIreNl~~~~~- 1111 (1252)
+||+|+||||||||+++|+|+++|++|+|.++ |.+ +...+ ...+|++++||||++.+|. .|++||+.++..
T Consensus 313 ~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~ 392 (520)
T TIGR03269 313 FGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL 392 (520)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc
Confidence 99999999999999999999999999999996 643 33332 2346778999999998876 599999975311
Q ss_pred CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHH
Q 000856 1112 GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVL 1187 (1252)
Q Consensus 1112 ~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i 1187 (1252)
.. .++++.++++..++.+.- .++-++.++ ..||||||||++|||||+.+|++|||||||++||+.+...+
T Consensus 393 ~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~~----~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l 466 (520)
T TIGR03269 393 ELPDELARMKAVITLKMVGFDEEK--AEEILDKYP----DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDV 466 (520)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCcc--chhhhhCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 11 123455667777664310 000123333 46999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-C-CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1188 QEALERLM-R-GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1188 ~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
.+.|+++. + +.|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 467 ~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 467 THSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99998875 2 7899999999999865 89999999999999999988764
No 73
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=5e-72 Score=603.32 Aligned_cols=470 Identities=31% Similarity=0.476 Sum_probs=365.1
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCCCHH
Q 000856 364 NIEFKNVTFSYPSR-PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTLQLR 437 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~ 437 (1252)
-++++|++..|... ....+++++||+|++||.+||||+||||||-..+.++|+++. -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 47899999988532 245689999999999999999999999999999999999964 379999999999877766
Q ss_pred HHhh----hceEEccCCC--Cchh-cHHHHH----hcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCC
Q 000856 438 WLRD----QIGLVNQEPA--LFAT-TILENI----LYGKPE---ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQ 503 (1252)
Q Consensus 438 ~~~~----~i~~v~Q~~~--l~~~-tv~~ni----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 503 (1252)
.+|+ +|+++||+|- |-+- ||..-| ..-..- +..++..+.++.+++.+ -...+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~--------p~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPE--------PEKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCc--------hhhhhhhCCcc
Confidence 6553 6999999993 3222 554444 332110 11122222222222211 11245667789
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEE
Q 000856 504 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVV 580 (1252)
Q Consensus 504 LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~ 580 (1252)
|||||||||.||.||+.+|++||-||||.+||.....+|.+.|+++. .|..+++||||+..++. ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 99999999999999999999999999999999999999999999985 38999999999999987 7999999999999
Q ss_pred EecChHHHHhcc-cchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccc
Q 000856 581 ETGTHEELIAKA-GAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSN 659 (1252)
Q Consensus 581 ~~g~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1252)
|+|+.+++.... ..|.+..
T Consensus 238 E~~~t~~lF~~PqHpYTr~L------------------------------------------------------------ 257 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKL------------------------------------------------------------ 257 (534)
T ss_pred ecCcHHHHhhCCCChHHHHH------------------------------------------------------------
Confidence 999877765431 1111000
Q ss_pred cccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHH
Q 000856 660 AETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGL 739 (1252)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1252)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 740 YAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLL 819 (1252)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~ 819 (1252)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHH
Q 000856 820 TSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHEL 899 (1252)
Q Consensus 820 ~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 899 (1252)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 900 RVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGES 979 (1252)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 979 (1252)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCC--------CccceeeeeEEEeCCcEEEEEcCCCCCh
Q 000856 980 VGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRP--------DVVVFKDFNLRIRAGQSQALVGASGSGK 1051 (1252)
Q Consensus 980 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIvG~SGSGK 1051 (1252)
++.++.. .+ .+.+...+.-++.+||...|+-+. ...+++++||+.++||.+||||+|||||
T Consensus 258 -------l~aeP~g---~~-~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGK 326 (534)
T COG4172 258 -------LAAEPSG---DP-PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGK 326 (534)
T ss_pred -------HhcCCCC---CC-CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCc
Confidence 0000000 00 000111123467777777775321 1358999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCceEEECCcccCCCCHHH---HhcccEEEccccc--c-CcccHHHHhccC----CCCCC----HHH
Q 000856 1052 SSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---LRLKIGLVQQEPA--L-FAASIFDNIAYG----KEGAT----EAE 1117 (1252)
Q Consensus 1052 STLl~lL~rl~~p~~G~I~idG~di~~~~~~~---lR~~i~~VpQd~~--l-f~gTIreNl~~~----~~~~~----dee 1117 (1252)
|||..+|+|+.+++ |+|.++|.||...+.++ +|+++-+|+|||+ | -..||-+-|.-| .+..+ ++.
T Consensus 327 sTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~r 405 (534)
T COG4172 327 STLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQR 405 (534)
T ss_pred chHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHH
Confidence 99999999999876 99999999999888765 7899999999996 2 234666555433 22333 566
Q ss_pred HHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--
Q 000856 1118 VVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-- 1195 (1252)
Q Consensus 1118 i~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-- 1195 (1252)
+.+|++.+|++.-... .-...||||||||||||||++-+|++++||||||+||..-+++|.+.++++-
T Consensus 406 v~~aL~EVGLDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k 475 (534)
T COG4172 406 VIEALEEVGLDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQK 475 (534)
T ss_pred HHHHHHHcCCChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHH
Confidence 8889999998754332 2235699999999999999999999999999999999999999999999875
Q ss_pred CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCchhHH
Q 000856 1196 RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDGAYSR 1243 (1252)
Q Consensus 1196 ~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~ 1243 (1252)
.+-+-++|+|++..++. ||+|+||.+|+|||+|+.++++++|...|.+
T Consensus 476 ~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 476 HGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred hCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 47799999999999965 8999999999999999999999999888864
No 74
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-72 Score=688.33 Aligned_cols=453 Identities=25% Similarity=0.381 Sum_probs=351.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH-HHHhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL-RWLRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~ 442 (1252)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..++++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999964 358999999999999999999999999999999999999999999999999865443 456778
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE-----ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
++|++|++.++.. |++||+.++... ....+.. ..+.+.++.+ |+.........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986321 1111111 1223445554 5555566778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcccc
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKAGA 594 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 594 (1252)
||+.+|+++||||||++||+.+++.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999999875 48999999999999866 89999999999986442100000
Q ss_pred hHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchHHH
Q 000856 595 YASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFL 674 (1252)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1252)
. .
T Consensus 230 ---------------------------------------------------------~-------~-------------- 231 (501)
T PRK11288 230 ---------------------------------------------------------R-------D-------------- 231 (501)
T ss_pred ---------------------------------------------------------H-------H--------------
Confidence 0 0
Q ss_pred HHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 675 RLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSI 754 (1252)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1252)
.+ .
T Consensus 232 ~~-----------------------------------~------------------------------------------ 234 (501)
T PRK11288 232 QL-----------------------------------V------------------------------------------ 234 (501)
T ss_pred HH-----------------------------------H------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 755 MGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSL 834 (1252)
Q Consensus 755 ~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l 834 (1252)
+.. ... . .
T Consensus 235 --------------~~~-------~~~-~--~------------------------------------------------ 242 (501)
T PRK11288 235 --------------QAM-------VGR-E--I------------------------------------------------ 242 (501)
T ss_pred --------------HHh-------cCC-C--c------------------------------------------------
Confidence 000 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000856 835 LILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAG 914 (1252)
Q Consensus 835 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1252)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 000856 915 ILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRID 994 (1252)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~ 994 (1252)
.......
T Consensus 243 -------------------------------------------------------------------------~~~~~~~ 249 (501)
T PRK11288 243 -------------------------------------------------------------------------GDIYGYR 249 (501)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000000
Q ss_pred CCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCc
Q 000856 995 PDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGK 1074 (1252)
Q Consensus 995 ~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~ 1074 (1252)
+. + +.+..++++|++++ .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.
T Consensus 250 ~~-~------~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~ 315 (501)
T PRK11288 250 PR-P------LGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGK 315 (501)
T ss_pred cc-C------CCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCE
Confidence 00 0 01124899999842 3899999999999999999999999999999999999999999999999
Q ss_pred ccCCCC-HHHHhcccEEEccccc---cC-cccHHHHhccCCCCC--------C----HHHHHHHHHHcCchhhHhhCCCc
Q 000856 1075 DIRRLN-LKSLRLKIGLVQQEPA---LF-AASIFDNIAYGKEGA--------T----EAEVVEAARAANVHGFVSALPNA 1137 (1252)
Q Consensus 1075 di~~~~-~~~lR~~i~~VpQd~~---lf-~gTIreNl~~~~~~~--------~----deei~~al~~~~l~~~i~~lp~g 1137 (1252)
++...+ .+..|++++|+||++. +| ..|+.||+.++.... . ++++.+.++..++. ++-
T Consensus 316 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~ 389 (501)
T PRK11288 316 PIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIK------TPS 389 (501)
T ss_pred ECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcc------cCC
Confidence 987544 3456789999999973 44 579999997642110 1 12344555555542 112
Q ss_pred CCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCE
Q 000856 1138 YKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDC 1215 (1252)
Q Consensus 1138 ldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~Dr 1215 (1252)
.++++ ..||||||||++|||||+.+|++|||||||++||..+...+++.|+++. .+.|||+|||+++.+. .||+
T Consensus 390 ~~~~~----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~ 465 (501)
T PRK11288 390 REQLI----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADR 465 (501)
T ss_pred ccCcc----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCE
Confidence 34444 4699999999999999999999999999999999999999999998875 4789999999999885 5799
Q ss_pred EEEEeCCEEEEecChhhhh
Q 000856 1216 IGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1216 I~vl~~G~Ive~G~~~eLl 1234 (1252)
+++|++|++++.|++++..
T Consensus 466 i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 466 IVVMREGRIAGELAREQAT 484 (501)
T ss_pred EEEEECCEEEEEEccccCC
Confidence 9999999999999987754
No 75
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.1e-72 Score=686.89 Aligned_cols=457 Identities=23% Similarity=0.378 Sum_probs=351.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC--CCcEEEECCccccCCCHHH-Hhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP--NAGHVLLDNVDIKTLQLRW-LRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~--~~G~i~~~g~~~~~~~~~~-~~~ 441 (1252)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 689999999963 3589999999999999999999999999999999999987 7999999999987766543 456
Q ss_pred hceEEccCCCCchh-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHhhCCCCccccc-cCCCCCCChHHHHHHH
Q 000856 442 QIGLVNQEPALFAT-TILENILYGKPE------ATMAEVEAAASAANAHSFITLLPNGYSTQV-GERGVQLSGGQKQRIA 513 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~-tv~~ni~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~LSgGqkqRv~ 513 (1252)
+++||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |+.... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 79999999988765 999999886421 1111111 1123444444 554332 3457799999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999999874 48899999999999976 899999999999866532110000
Q ss_pred ccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCch
Q 000856 592 AGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDG 671 (1252)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1252)
T Consensus 232 -------------------------------------------------------------------------------- 231 (500)
T TIGR02633 232 -------------------------------------------------------------------------------- 231 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 672 YFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYF 751 (1252)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1252)
.. ...
T Consensus 232 ---~~-----------------------------------~~~------------------------------------- 236 (500)
T TIGR02633 232 ---DI-----------------------------------ITM------------------------------------- 236 (500)
T ss_pred ---HH-----------------------------------HHH-------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 752 FSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWR 831 (1252)
Q Consensus 752 ~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 831 (1252)
. +.. + .
T Consensus 237 -------------------~-------~~~-~--~--------------------------------------------- 242 (500)
T TIGR02633 237 -------------------M-------VGR-E--I--------------------------------------------- 242 (500)
T ss_pred -------------------H-------hCc-c--c---------------------------------------------
Confidence 0 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH
Q 000856 832 VSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSL 911 (1252)
Q Consensus 832 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1252)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T TIGR02633 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000856 912 TAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRST 991 (1252)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~ 991 (1252)
....+
T Consensus 243 ---------------------------------------------------------------------------~~~~~ 247 (500)
T TIGR02633 243 ---------------------------------------------------------------------------TSLYP 247 (500)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00000
Q ss_pred CCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-CCceEE
Q 000856 992 RIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-TAGKVM 1070 (1252)
Q Consensus 992 ~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-~~G~I~ 1070 (1252)
. .+. + ..+.-|+++|++++|+...+.++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.
T Consensus 248 ~-~~~-~------~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~ 319 (500)
T TIGR02633 248 H-EPH-E------IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVF 319 (500)
T ss_pred c-ccc-C------CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEE
Confidence 0 000 0 001248999999999422123599999999999999999999999999999999999995 899999
Q ss_pred ECCcccCCCCH-HHHhcccEEEcccc---ccCc-ccHHHHhccCCC-------CCC----HHHHHHHHHHcCchhhHhhC
Q 000856 1071 IDGKDIRRLNL-KSLRLKIGLVQQEP---ALFA-ASIFDNIAYGKE-------GAT----EAEVVEAARAANVHGFVSAL 1134 (1252)
Q Consensus 1071 idG~di~~~~~-~~lR~~i~~VpQd~---~lf~-gTIreNl~~~~~-------~~~----deei~~al~~~~l~~~i~~l 1134 (1252)
++|.++...+. ..+|++++||||++ .+|. .|+++|+.++.. ... ++++.++++..++.+
T Consensus 320 ~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----- 394 (500)
T TIGR02633 320 INGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT----- 394 (500)
T ss_pred ECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC-----
Confidence 99999865443 56788999999996 3554 699999986421 011 123455555555421
Q ss_pred CCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-
Q 000856 1135 PNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG- 1212 (1252)
Q Consensus 1135 p~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~- 1212 (1252)
.-.+.++ ..||||||||++|||||+++|++|||||||++||+.+...+++.|+++. ++.|||+|||+++.+..
T Consensus 395 -~~~~~~~----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~ 469 (500)
T TIGR02633 395 -ASPFLPI----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGL 469 (500)
T ss_pred -CCccCcc----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHh
Confidence 1123444 4699999999999999999999999999999999999999999998874 47899999999999865
Q ss_pred cCEEEEEeCCEEEEecChhhh
Q 000856 1213 VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1213 ~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||+|++|++|+++..++.+++
T Consensus 470 ~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 470 SDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred CCEEEEEECCEEEEEEccccC
Confidence 899999999999987765443
No 76
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1e-71 Score=681.18 Aligned_cols=462 Identities=22% Similarity=0.381 Sum_probs=356.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHh-hh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLR-DQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~-~~ 442 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5899999999964 3589999999999999999999999999999999999999999999999998776665544 46
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
++|++|++.++.. |++||+.++.... .+... .+.+.++.+ |++........+|||||||||+|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASMQ-----KMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHHH-----HHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999988875 9999999875321 11111 122344444 566566777889999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcccchHHHH
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKAGAYASLI 599 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 599 (1252)
|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.... ..
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-----~~ 233 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-----II 233 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----HH
Confidence 99999999999999999999999999874 48999999999999866 8999999999999988876653210 00
Q ss_pred HHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchHHHHHHHh
Q 000856 600 RFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLLKL 679 (1252)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1252)
+. ... ... . .
T Consensus 234 ~~---~~~-~~~------~---------------------------------~--------------------------- 243 (510)
T PRK15439 234 QA---ITP-AAR------E---------------------------------K--------------------------- 243 (510)
T ss_pred HH---HhC-ccc------c---------------------------------c---------------------------
Confidence 00 000 000 0 0
Q ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 680 NAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENL 759 (1252)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (1252)
T Consensus 244 -------------------------------------------------------------------------------- 243 (510)
T PRK15439 244 -------------------------------------------------------------------------------- 243 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 760 TTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGT 839 (1252)
Q Consensus 760 ~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~ 839 (1252)
.+ + ..
T Consensus 244 ---------------~~------~-~~----------------------------------------------------- 248 (510)
T PRK15439 244 ---------------SL------S-AS----------------------------------------------------- 248 (510)
T ss_pred ---------------cc------c-cc-----------------------------------------------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000856 840 YPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGI 919 (1252)
Q Consensus 840 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1252)
+
T Consensus 249 ------------------------------------------------------------~------------------- 249 (510)
T PRK15439 249 ------------------------------------------------------------Q------------------- 249 (510)
T ss_pred ------------------------------------------------------------c-------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 000856 920 SQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPD 999 (1252)
Q Consensus 920 ~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~ 999 (1252)
+. . ...+.. .+..+
T Consensus 250 --------------------------------------------------------------~~-~-~~~~~~-~~~~~- 263 (510)
T PRK15439 250 --------------------------------------------------------------KL-W-LELPGN-RRQQA- 263 (510)
T ss_pred --------------------------------------------------------------cc-c-cccccc-ccccC-
Confidence 00 0 000000 00000
Q ss_pred CCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC
Q 000856 1000 AEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL 1079 (1252)
Q Consensus 1000 ~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~ 1079 (1252)
+.+.-|+++|++. .+|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.++|.++...
T Consensus 264 -----~~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~ 330 (510)
T PRK15439 264 -----AGAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINAL 330 (510)
T ss_pred -----CCCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCC
Confidence 0112489999983 159999999999999999999999999999999999999999999999999877
Q ss_pred CHHH-HhcccEEEcccc---ccCc-ccHHHHhccCC----CC--CC---HHHHHHHHHHcCchhhHhhCCCcCCCccCCC
Q 000856 1080 NLKS-LRLKIGLVQQEP---ALFA-ASIFDNIAYGK----EG--AT---EAEVVEAARAANVHGFVSALPNAYKTPVGER 1145 (1252)
Q Consensus 1080 ~~~~-lR~~i~~VpQd~---~lf~-gTIreNl~~~~----~~--~~---deei~~al~~~~l~~~i~~lp~gldt~vge~ 1145 (1252)
+... .|++++||||++ .+|. .|+.+|+.... +. .. ++++.++++..++. +...+.++
T Consensus 331 ~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~--- 401 (510)
T PRK15439 331 STAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIK------FNHAEQAA--- 401 (510)
T ss_pred CHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCC------CCCccCcc---
Confidence 6654 467899999996 2554 59999985320 10 01 12344455555442 12234444
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCE
Q 000856 1146 GVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGR 1223 (1252)
Q Consensus 1146 G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1223 (1252)
..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 402 -~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~ 480 (510)
T PRK15439 402 -RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGE 480 (510)
T ss_pred -ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 4699999999999999999999999999999999999999999999875 48899999999999865 89999999999
Q ss_pred EEEecChhhhhc
Q 000856 1224 IVEQGSHSELVS 1235 (1252)
Q Consensus 1224 Ive~G~~~eLl~ 1235 (1252)
++..|+++++..
T Consensus 481 i~~~~~~~~~~~ 492 (510)
T PRK15439 481 ISGALTGAAINV 492 (510)
T ss_pred EEEEEccccCCH
Confidence 999999988764
No 77
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.6e-69 Score=668.66 Aligned_cols=534 Identities=16% Similarity=0.149 Sum_probs=434.1
Q ss_pred HHHHHHHhhC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 672 YFLRLLKLNA-PEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHY 750 (1252)
Q Consensus 672 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1252)
..++++++.+ +.++.++++++.+++.++.....+++++.+++... .. .. .....++++.++..++.++..+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~----~~--~~--~~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEEN----FL--GQ--GSLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cc--cc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777 78888888777777777766666666665553210 00 00 0112233344555667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 751 FFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEW 830 (1252)
Q Consensus 751 ~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 830 (1252)
+....+.+...++|.++++++++.|++||++ .++|++++|+++|++.++.++.. +..++..++.++++++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 8999999999999999999999999999975 78999999999999999998864 77788888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHH--HHHHHHHHHHHhHHHHHHH
Q 000856 831 RVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQN--KILSLFCHELRVPQSQTLR 908 (1252)
Q Consensus 831 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~--~~~~~~~~~~~~~~~~~~~ 908 (1252)
.+++++++.+|+.+++.++..++.++...+.++..+.....+.|.+.|++++|+|+.++ ...+++.+..++..+...+
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999988888887777777666677677777888899999999999999999999954 4566777777777666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000856 909 RSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLD 988 (1252)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~ 988 (1252)
..........+..++..+...+.++++... |.++.|.++++..+......|+..+.....++.++..+.+|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544444333333444333344444444433 78999999999999999999999999999999999999999999976
Q ss_pred ccCCCCCC--CCCCC-----CCCCccccEEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHh
Q 000856 989 RSTRIDPD--DPDAE-----PVETIRGEIELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIE 1059 (1252)
Q Consensus 989 ~~~~~~~~--~~~~~-----~~~~~~g~I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~ 1059 (1252)
.+.+.++. .+... +.....+.|+|+||+|+|++.+ .+++|+|+||+|++||++|||||||||||||+++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 32111110 01000 1112246799999999997431 236999999999999999999999999999999999
Q ss_pred ccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCC
Q 000856 1060 RFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYK 1139 (1252)
Q Consensus 1060 rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gld 1139 (1252)
|+++|++|+|.+||+|+++++.+++|+++++|+||+++|++|+++|+ .++.++++++++++.++++++++.+|+|+|
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999996 356789999999999999999999999999
Q ss_pred CccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHH-H-cCCCeEEEEecCchhhhccCEEE
Q 000856 1140 TPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALER-L-MRGRTTVLVAHRLSTIRGVDCIG 1217 (1252)
Q Consensus 1140 t~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~-~-~~~~TvI~IaHrl~ti~~~DrI~ 1217 (1252)
|. .+||||||||++||||++++|+|||||||||+||++||+.+++.+.+ . .+++|+|+||||++++..||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 95 68999999999999999999999999999999999999999987643 3 36899999999999999999999
Q ss_pred EEeCCEEEEe
Q 000856 1218 VVQDGRIVEQ 1227 (1252)
Q Consensus 1218 vl~~G~Ive~ 1227 (1252)
+|++|+|+|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999875
No 78
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=6.8e-69 Score=706.99 Aligned_cols=221 Identities=26% Similarity=0.403 Sum_probs=189.4
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..|+++|++++|+++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. +...+|++
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 369999999999632 3469999999999999999999999999999999999999999999999999864 45567888
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|||+|++.+++. ||+||+.++... ...++..+ .+.+.++.+ |++...++...+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999875 999999874211 11112111 123344444 6666778888999999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
.+|+++|||||||+||+.+++.+++.|+++++|+|||++||+++++.. ||||++|++|+++..|+++++.++-
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999999998779999999999999976 8999999999999999999987653
No 79
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-71 Score=675.85 Aligned_cols=450 Identities=21% Similarity=0.348 Sum_probs=347.2
Q ss_pred EEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH-HHHhhhceE
Q 000856 367 FKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL-RWLRDQIGL 445 (1252)
Q Consensus 367 ~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~i~~ 445 (1252)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+++.++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 358999999999999999999999999999999999999999999999999876544 345678999
Q ss_pred EccCCCCchh-cHHHHHhcCCCCC-----CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 446 VNQEPALFAT-TILENILYGKPEA-----TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 446 v~Q~~~l~~~-tv~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
++|++.++.. |++||+.++.... ...+.. ..+.+.++.+ |++....+...+|||||||||+|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 9999987755 9999998763211 111111 1223445554 6666667788899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcccchHH
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKAGAYAS 597 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 597 (1252)
.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++... .
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-----~ 225 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-----K 225 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-----H
Confidence 9999999999999999999999999999875 48999999999999866 899999999999987765432000 0
Q ss_pred HHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchHHHHHH
Q 000856 598 LIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLL 677 (1252)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1252)
..
T Consensus 226 ~~------------------------------------------------------------------------------ 227 (491)
T PRK10982 226 II------------------------------------------------------------------------------ 227 (491)
T ss_pred HH------------------------------------------------------------------------------
Confidence 00
Q ss_pred HhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 678 KLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGE 757 (1252)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1252)
..
T Consensus 228 -----------------------------------~~------------------------------------------- 229 (491)
T PRK10982 228 -----------------------------------AM------------------------------------------- 229 (491)
T ss_pred -----------------------------------HH-------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 758 NLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLIL 837 (1252)
Q Consensus 758 ~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l 837 (1252)
....++.
T Consensus 230 -------------~~~~~~~------------------------------------------------------------ 236 (491)
T PRK10982 230 -------------MVGRSLT------------------------------------------------------------ 236 (491)
T ss_pred -------------HhCCCcc------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000856 838 GTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILF 917 (1252)
Q Consensus 838 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1252)
T Consensus 237 -------------------------------------------------------------------------------- 236 (491)
T PRK10982 237 -------------------------------------------------------------------------------- 236 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000856 918 GISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDD 997 (1252)
Q Consensus 918 ~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~ 997 (1252)
. .. +. ...
T Consensus 237 -------------------------------------------------------------------~--~~-~~-~~~- 244 (491)
T PRK10982 237 -------------------------------------------------------------------Q--RF-PD-KEN- 244 (491)
T ss_pred -------------------------------------------------------------------c--cc-cc-ccC-
Confidence 0 00 00 000
Q ss_pred CCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC
Q 000856 998 PDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR 1077 (1252)
Q Consensus 998 ~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~ 1077 (1252)
+ +.+..|+++|++++|. ++|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.+||.++.
T Consensus 245 ~------~~~~~i~~~~l~~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~ 313 (491)
T PRK10982 245 K------PGEVILEVRNLTSLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKIN 313 (491)
T ss_pred C------CCCcEEEEeCcccccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECC
Confidence 0 0112489999998751 4899999999999999999999999999999999999999999999999998
Q ss_pred CCCHH-HHhcccEEEccccc---cCc-ccHHHH-----hccCCC--C-CC----HHHHHHHHHHcCchhhHhhCCCcCCC
Q 000856 1078 RLNLK-SLRLKIGLVQQEPA---LFA-ASIFDN-----IAYGKE--G-AT----EAEVVEAARAANVHGFVSALPNAYKT 1140 (1252)
Q Consensus 1078 ~~~~~-~lR~~i~~VpQd~~---lf~-gTIreN-----l~~~~~--~-~~----deei~~al~~~~l~~~i~~lp~gldt 1140 (1252)
..+.. .+|+.++|+||++. +|. .|+++| +..... . .+ ++++.+.++..++. .+-.+.
T Consensus 314 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~ 387 (491)
T PRK10982 314 NHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVK------TPGHRT 387 (491)
T ss_pred CCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCcc------CCCccc
Confidence 76654 45788999999963 454 466666 432111 1 11 12234444444432 111344
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEE
Q 000856 1141 PVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGV 1218 (1252)
Q Consensus 1141 ~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~v 1218 (1252)
++ ..||||||||++||||++++|+||||||||++||+.+...+++.|+++. +++|||+|||+++.+. .|||+++
T Consensus 388 ~~----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~ 463 (491)
T PRK10982 388 QI----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILV 463 (491)
T ss_pred cc----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEE
Confidence 44 4699999999999999999999999999999999999999999998864 5899999999999885 5799999
Q ss_pred EeCCEEEEecChhhh
Q 000856 1219 VQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1219 l~~G~Ive~G~~~eL 1233 (1252)
|++|+++..++.+++
T Consensus 464 l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 464 MSNGLVAGIVDTKTT 478 (491)
T ss_pred EECCEEEEEEccccC
Confidence 999999988876543
No 80
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1e-69 Score=604.14 Aligned_cols=532 Identities=25% Similarity=0.325 Sum_probs=462.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 691 AIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAA 770 (1252)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 770 (1252)
.+++.+-.++....+.++-...|.+..+.. ......+.++.+++.++..++-.++.....+++.++..+++..+|..
T Consensus 29 ~lfS~~INiL~L~~~lyMLQVyDRVL~S~s---~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a 105 (580)
T COG4618 29 GLFSAVINLLALTGPLYMLQVYDRVLPSRS---VPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAA 105 (580)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhccCCC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 333444444555555555555554443221 11222333444445555667777889999999999999999999999
Q ss_pred HHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 771 ILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQ 850 (1252)
Q Consensus 771 ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~ 850 (1252)
.+++|..- ++.|+= ..--+|.++++.+++..-+..+.+....-+.+.++|.+++++.++.++...+++.+.++.
T Consensus 106 ~~~~~l~~-----~~~g~~-~Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln 179 (580)
T COG4618 106 SFSAPLLR-----RGSGDG-LQPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLN 179 (580)
T ss_pred HHhhHHhh-----cCCCcc-ccchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776642 222221 123489999999999988888888888888888999999999999999999999999998
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 851 QLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEAL 930 (1252)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1252)
.+..++..++..+.....+.+...+..+.++|++.|......++|.+....+.....+.+-..+.+..++..+-...+..
T Consensus 180 ~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~ 259 (580)
T COG4618 180 ERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSA 259 (580)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888899999999999999999999999999999999888888888888889999999999999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccE
Q 000856 931 ILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEI 1010 (1252)
Q Consensus 931 ~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I 1010 (1252)
++.+|.+++..|++|.|.+++..........|+...+..|.++..+..+..|+.+.+...+...+. -+.+..+|.+
T Consensus 260 iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~----m~LP~P~g~L 335 (580)
T COG4618 260 VLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAER----MPLPAPQGAL 335 (580)
T ss_pred HHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCCCCCcee
Confidence 999999999999999999999999999999999999999999999999999999999865543321 2223346899
Q ss_pred EEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000856 1011 ELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGL 1090 (1252)
Q Consensus 1011 ~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1090 (1252)
.++++++.-|+. .+|+|+|+||+++|||-+||+||||||||||.++|.|.++|.+|.|.+||-|+++++.+++-++|||
T Consensus 336 ~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGY 414 (580)
T COG4618 336 SVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGY 414 (580)
T ss_pred eEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCc
Confidence 999999976644 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000856 1091 VQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAIL 1170 (1252)
Q Consensus 1091 VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~IL 1170 (1252)
.|||..||+|||+|||+-+.++.++|.+.+|++.++.||.|.++|+||||.|||+|..|||||||||+||||++.+|.++
T Consensus 415 LPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 415 LPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred CcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEE
Confidence 99999999999999998777789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1171 LLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1171 iLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
+||||-|+||.+.|+.+.++|.+.+ +|+|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999998876 69999999999999999999999999999999999998875
No 81
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.9e-68 Score=657.40 Aligned_cols=535 Identities=16% Similarity=0.139 Sum_probs=433.2
Q ss_pred chHHHHHHhhc-hhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000856 24 LPFFQLFSFAD-KYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSY 102 (1252)
Q Consensus 24 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1252)
..+++++++.+ ++++ .++++++++++.++.....+++++.+++..... . . . ....++++.++.+++.|
T Consensus 3 ~~~~~l~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---~-~--~----~~~~~~~~~~~~~~~~~ 71 (555)
T TIGR01194 3 AAIGEILALLRSPFPA-ITAFSIALGLAGGLAIIALLASINNAIHEENFL---G-Q--G----SLFSFGGLCLLALLFRI 71 (555)
T ss_pred chHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---c-c--h----HHHHHHHHHHHHHHHHH
Confidence 34677777777 5544 455566666666665555555667776542110 0 0 0 11123334556667888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 103 AEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV 182 (1252)
Q Consensus 103 ~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 182 (1252)
++.++.+..+.++..++|.+++++++++|+.+|++. ++|++++|+++|++.+++++.. ++.++..++++++.++++++
T Consensus 72 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~ 149 (555)
T TIGR01194 72 GADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAY 149 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999865 8999999999999999999864 77888888888888999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchH--HHHHHHHHHHHHHHHH
Q 000856 183 SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGES--KALNSYSDAIQNTLKL 260 (1252)
Q Consensus 183 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~--~~~~~~~~~~~~~~~~ 260 (1252)
++|.+++++++.+|+.+++..+..++.++...+.++..++.++.+.|.+.|++++|+|+.++ ...+++.+..++.++.
T Consensus 150 ~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 229 (555)
T TIGR01194 150 LSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADL 229 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999988888888887778788888888888889999999999999999999999954 5677888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 261 GYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLME 340 (1252)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 340 (1252)
..+..+.......+..++..+...++++++++. +.++.|.+++++++......|+..+...+..++++..+.+|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ 306 (555)
T TIGR01194 230 HIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLAD 306 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666555444433333333333333344444432 68999998888888878788999999999999999999999999
Q ss_pred HHccCCC--CCCCCCCCC-----cCCCCcccEEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHH
Q 000856 341 IIKQKPS--IIQDPTNGR-----CLDEVNGNIEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVS 411 (1252)
Q Consensus 341 ~l~~~~~--~~~~~~~~~-----~~~~~~~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~ 411 (1252)
+++.+.+ ...+..... ......+.|+++||+|+|++.+ +.++|+|+||++++||+++|+||||||||||++
T Consensus 307 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ 386 (555)
T TIGR01194 307 FGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAK 386 (555)
T ss_pred HHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHH
Confidence 9863211 110000000 1111235799999999997532 235899999999999999999999999999999
Q ss_pred HHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCC
Q 000856 412 LIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPN 491 (1252)
Q Consensus 412 ~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (1252)
+|+|+++|++|+|.+||.|+++++..++|++++||+|++++|++|+++|+ .++.++++++++++.+++++++..+|+
T Consensus 387 ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~ 463 (555)
T TIGR01194 387 LFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDG 463 (555)
T ss_pred HHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccccc
Confidence 99999999999999999999999999999999999999999999999995 355678889999999999999999999
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHH-Hh-cCCCeEEEEccCccchhccC
Q 000856 492 GYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALD-RL-MVGRTTVVVAHRLSTIRNVD 569 (1252)
Q Consensus 492 g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~-~~-~~~~tvi~itH~~~~~~~~d 569 (1252)
|++|. .+||||||||++||||++++|+|+|||||||+||+++++.+.+.+. .+ .+++|+|+||||++.+..||
T Consensus 464 g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d 538 (555)
T TIGR01194 464 GFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELAD 538 (555)
T ss_pred ccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCC
Confidence 99984 6899999999999999999999999999999999999999988764 44 35899999999999999999
Q ss_pred EEEEEeCCEEEEe
Q 000856 570 TVAVIQQGQVVET 582 (1252)
Q Consensus 570 ~i~~l~~G~i~~~ 582 (1252)
+|++|++|++++.
T Consensus 539 ~i~~l~~G~i~~~ 551 (555)
T TIGR01194 539 QIIKLAAGCIVKD 551 (555)
T ss_pred EEEEEECCEEEEe
Confidence 9999999999864
No 82
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.9e-70 Score=669.45 Aligned_cols=452 Identities=23% Similarity=0.300 Sum_probs=345.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3889999999974 2489999999999999999999999999999999999999999999999888766666667789
Q ss_pred eEEccCCCC--c-------hhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 444 GLVNQEPAL--F-------ATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 444 ~~v~Q~~~l--~-------~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
+|++|++.+ + ..|+++|+.++. ...+++. +.++.+ |++...+....+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCE---------QLAQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccch--hHHHHHH---------HHHHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 348888876531 1112222 233333 55555667788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
||||+.+|++|||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+.+++....
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 999999999999999999999999999999999875 47899999999999876 8999999999999988876653210
Q ss_pred cchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchH
Q 000856 593 GAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGY 672 (1252)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1252)
. ...+.. . +
T Consensus 227 ~-~~~~~~-----------------~---------------------~-------------------------------- 235 (490)
T PRK10938 227 L-VAQLAH-----------------S---------------------E-------------------------------- 235 (490)
T ss_pred h-hhhhhh-----------------h---------------------h--------------------------------
Confidence 0 000000 0 0
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 673 FLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFF 752 (1252)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1252)
T Consensus 236 -------------------------------------------------------------------------------- 235 (490)
T PRK10938 236 -------------------------------------------------------------------------------- 235 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 753 SIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRV 832 (1252)
Q Consensus 753 ~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 832 (1252)
+ + .. .+.+.
T Consensus 236 -----------------~-----~--~~-~~~~~---------------------------------------------- 244 (490)
T PRK10938 236 -----------------Q-----L--EG-VQLPE---------------------------------------------- 244 (490)
T ss_pred -----------------c-----c--Cc-cccCc----------------------------------------------
Confidence 0 0 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000856 833 SLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLT 912 (1252)
Q Consensus 833 ~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1252)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000856 913 AGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTR 992 (1252)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~ 992 (1252)
... +.
T Consensus 245 --------------------------------------------------------------------------~~~-~~ 249 (490)
T PRK10938 245 --------------------------------------------------------------------------PDE-PS 249 (490)
T ss_pred --------------------------------------------------------------------------ccc-cc
Confidence 000 00
Q ss_pred CCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-CCceEEE
Q 000856 993 IDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-TAGKVMI 1071 (1252)
Q Consensus 993 ~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-~~G~I~i 1071 (1252)
.+... + ....-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.+
T Consensus 250 -~~~~~---~--~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~ 320 (490)
T PRK10938 250 -ARHAL---P--ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTL 320 (490)
T ss_pred -ccccc---C--CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEE
Confidence 00000 0 01124999999999953 3599999999999999999999999999999999998876 6999999
Q ss_pred CCcccCC-CCHHHHhcccEEEccccccCc---ccHHHHhccCCC-------CCC---HHHHHHHHHHcCchh-hHhhCCC
Q 000856 1072 DGKDIRR-LNLKSLRLKIGLVQQEPALFA---ASIFDNIAYGKE-------GAT---EAEVVEAARAANVHG-FVSALPN 1136 (1252)
Q Consensus 1072 dG~di~~-~~~~~lR~~i~~VpQd~~lf~---gTIreNl~~~~~-------~~~---deei~~al~~~~l~~-~i~~lp~ 1136 (1252)
+|.++.. .+....|++++|+||++.++. .|+++++.++.. ... ++++.++++..++.+ ..
T Consensus 321 ~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----- 395 (490)
T PRK10938 321 FGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTA----- 395 (490)
T ss_pred ecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhc-----
Confidence 9987632 234457889999999986542 467777653210 111 234566677776643 22
Q ss_pred cCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CC-CeEEEEecCchhhhc--
Q 000856 1137 AYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RG-RTTVLVAHRLSTIRG-- 1212 (1252)
Q Consensus 1137 gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~-~TvI~IaHrl~ti~~-- 1212 (1252)
+.++ ..||||||||++|||||+++|++|||||||++||+.+...+.+.|+++. ++ +|||+|||+++.+..
T Consensus 396 --~~~~----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~ 469 (490)
T PRK10938 396 --DAPF----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACI 469 (490)
T ss_pred --cCch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhh
Confidence 2333 4699999999999999999999999999999999999999999999875 34 479999999999964
Q ss_pred cCEEEEEeCCEEEEec
Q 000856 1213 VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1213 ~DrI~vl~~G~Ive~G 1228 (1252)
||++++|++|+|++.-
T Consensus 470 ~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 470 THRLEFVPDGDIYRYV 485 (490)
T ss_pred heeEEEecCCceEEee
Confidence 6999999999998753
No 83
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-69 Score=588.96 Aligned_cols=490 Identities=32% Similarity=0.437 Sum_probs=415.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhH
Q 000856 107 CWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAG-LVVGFVSAW 185 (1252)
Q Consensus 107 ~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~ 185 (1252)
.+...++.....+--+.|.|+.++++.|+-++ ++|.+..-+......|+..+...+..++..++=+... .++...++|
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 34455666677777788999999999998764 7888877777766666665555555555544433333 333445788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Q 000856 186 RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAG 265 (1252)
Q Consensus 186 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 265 (1252)
+.+++.++++.+..++.....-......+...++.++++....|++-+.+++|.|+.|+.+..+|....+.+.+...|..
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 88888777766666555444444444445666778888999999999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000856 266 MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQK 345 (1252)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 345 (1252)
...++.......+......+....+..-+..|.+|.|++...-.+++....|+..+...+..+.+++...++++++++.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 66666555444455555556667777788899999999877666666667788888888999999999999999999887
Q ss_pred CCCCCCCCCCCcCC-CCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEE
Q 000856 346 PSIIQDPTNGRCLD-EVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHV 424 (1252)
Q Consensus 346 ~~~~~~~~~~~~~~-~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i 424 (1252)
.+....+ ..++.. ...+.+.|+||+|.|. +.+++|+++||++++|+++|+|||||+||||++++|.|||++++|.|
T Consensus 244 ~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I 320 (497)
T COG5265 244 AEVSDAP-DAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI 320 (497)
T ss_pred hhhccCC-CCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE
Confidence 6643222 222222 3456799999999996 45679999999999999999999999999999999999999999999
Q ss_pred EECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCC
Q 000856 425 LLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQL 504 (1252)
Q Consensus 425 ~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~L 504 (1252)
.+||+|+++.....+|+.||.||||..||++|+..||.+|.|.++++++..+++.++.+++++.+|+|++|.|||+|-.|
T Consensus 321 ~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglkl 400 (497)
T COG5265 321 TIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKL 400 (497)
T ss_pred EEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 505 SGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 505 SgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
||||||||||||+++++|+||+|||+||+||.++|+.++..|++..+|+|.++|+||++++-+||.|+||++|+|+|.|+
T Consensus 401 Sggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~ 480 (497)
T COG5265 401 SGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGT 480 (497)
T ss_pred cCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhcccchHHHHH
Q 000856 585 HEELIAKAGAYASLIR 600 (1252)
Q Consensus 585 ~~~l~~~~~~~~~~~~ 600 (1252)
|+||++..|.|+++|.
T Consensus 481 h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 481 HEELLAAGGLYAEMWR 496 (497)
T ss_pred HHHHHHcCChHHHHhc
Confidence 9999999999999874
No 84
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-68 Score=659.04 Aligned_cols=480 Identities=24% Similarity=0.392 Sum_probs=345.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999964 35999999999999999999999999999999999999999999999873 3699
Q ss_pred EEccCCCCchh-cHHHHHhcCCCCC----------------CHH---HHHHH----------HHHhcHHHHHhhCCCCcc
Q 000856 445 LVNQEPALFAT-TILENILYGKPEA----------------TMA---EVEAA----------ASAANAHSFITLLPNGYS 494 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~~----------------~~~---~~~~~----------~~~~~~~~~~~~~~~g~~ 494 (1252)
|++|++.++.. |++||+.++.... ... .+.+. .....+.+.++.+ |+.
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988765 9999998753100 000 00000 0011233445555 565
Q ss_pred ccc-cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEE
Q 000856 495 TQV-GERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVA 572 (1252)
Q Consensus 495 ~~~-~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~ 572 (1252)
... .....+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|.+ .+.|||+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 433 356789999999999999999999999999999999999999999999975 47899999999999876 89999
Q ss_pred EEeCCEE-EEecChHHHHhcccc-hHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCC
Q 000856 573 VIQQGQV-VETGTHEELIAKAGA-YASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGA 650 (1252)
Q Consensus 573 ~l~~G~i-~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1252)
+|++|++ ++.|+++++.+.... +........
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 256 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLLADNA----------------------------------------------- 256 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHHHHH-----------------------------------------------
Confidence 9999999 478888776432100 000000000
Q ss_pred CcccccccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHH
Q 000856 651 DGRIEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEF 730 (1252)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1252)
+.. ...
T Consensus 257 ------------------------~~~-------------------------------------------~~~------- 262 (530)
T PRK15064 257 ------------------------KKK-------------------------------------------AQI------- 262 (530)
T ss_pred ------------------------HHH-------------------------------------------HHH-------
Confidence 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHH
Q 000856 731 VFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISV 810 (1252)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~ 810 (1252)
.+++. ... +
T Consensus 263 ------------------------------~~~~~-~~~----------------------~------------------ 271 (530)
T PRK15064 263 ------------------------------AELQS-FVS----------------------R------------------ 271 (530)
T ss_pred ------------------------------HHHHH-HHH----------------------H------------------
Confidence 00000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHH
Q 000856 811 ILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNK 890 (1252)
Q Consensus 811 ~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~ 890 (1252)
..... . ++
T Consensus 272 -----------------------------------------------------~~~~~-~------------~~------ 279 (530)
T PRK15064 272 -----------------------------------------------------FSANA-S------------KA------ 279 (530)
T ss_pred -----------------------------------------------------hhccc-h------------hh------
Confidence 00000 0 00
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 891 ILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLA 970 (1252)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1252)
....
T Consensus 280 ---------~~~~------------------------------------------------------------------- 283 (530)
T PRK15064 280 ---------KQAT------------------------------------------------------------------- 283 (530)
T ss_pred ---------HHHH-------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHH-hcccCCCCCCCCC---CCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcC
Q 000856 971 PEIIRGGESVGSVFST-LDRSTRIDPDDPD---AEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGA 1046 (1252)
Q Consensus 971 ~~~~~~~~s~~ri~~~-~~~~~~~~~~~~~---~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~ 1046 (1252)
....++.+. ....+......+. .......+..|+++|++++|++ .++|+|+||+|++||++||+||
T Consensus 284 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~ 353 (530)
T PRK15064 284 -------SRAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGE 353 (530)
T ss_pred -------HHHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECC
Confidence 000000000 0000000000000 0000011236999999999963 3599999999999999999999
Q ss_pred CCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccc--cC-cccHHHHhccCC-CCCCHHHHHHHH
Q 000856 1047 SGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPA--LF-AASIFDNIAYGK-EGATEAEVVEAA 1122 (1252)
Q Consensus 1047 SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~--lf-~gTIreNl~~~~-~~~~deei~~al 1122 (1252)
||||||||+++|+|+++|++|+|.++| +++++|+||++. ++ ..|+++|+.... ....++++.+++
T Consensus 354 NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l 422 (530)
T PRK15064 354 NGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTL 422 (530)
T ss_pred CCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHH
Confidence 999999999999999999999999987 357999999974 44 369999986432 223456677888
Q ss_pred HHcCch-hhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEE
Q 000856 1123 RAANVH-GFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTV 1201 (1252)
Q Consensus 1123 ~~~~l~-~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI 1201 (1252)
+..++. +.. +.++ ..||||||||++||||++++|+||||||||++||+.+...+.+.|++. +.|||
T Consensus 423 ~~~~l~~~~~-------~~~~----~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi 489 (530)
T PRK15064 423 GRLLFSQDDI-------KKSV----KVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLI 489 (530)
T ss_pred HHcCCChhHh-------cCcc----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEE
Confidence 888773 332 2333 469999999999999999999999999999999999999999999886 45999
Q ss_pred EEecCchhhhc-cCEEEEEeCCEEE-EecChhhhhcC
Q 000856 1202 LVAHRLSTIRG-VDCIGVVQDGRIV-EQGSHSELVSR 1236 (1252)
Q Consensus 1202 ~IaHrl~ti~~-~DrI~vl~~G~Iv-e~G~~~eLl~~ 1236 (1252)
+|||+++.+.. ||+|++|++|+++ ..|+++++++.
T Consensus 490 ~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 490 FVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred EEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999865 8999999999998 78999888764
No 85
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=9.1e-67 Score=699.93 Aligned_cols=502 Identities=17% Similarity=0.186 Sum_probs=404.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000856 93 LGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLST 172 (1252)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~ 172 (1252)
++++..++.+++.+++.+.+.+...++|.++++++++.|++||+.. ++|++++|+++|++.+++.+...+..++..++.
T Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~ 1012 (1490)
T TIGR01271 934 TADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLI 1012 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556677788888888999999999999999999999999965 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHH
Q 000856 173 FLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSD 252 (1252)
Q Consensus 173 ~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~ 252 (1252)
+++.++++++++|.++++++.++.+++++..++.+..++..+......+...+.+.|++.|+.+||+|++++.+.+++.+
T Consensus 1013 ~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~ 1092 (1490)
T TIGR01271 1013 VLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHK 1092 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHH
Confidence 99999988888887655444333333344445555555555555666677899999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 253 AIQNTLKLGYKAGMAKGLGLGCTYGIACMSW--ALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSK 330 (1252)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 330 (1252)
..+...+..+.......+......++..+.. +++++++. ...+.|.+..++.+.+....++..+...+..+..
T Consensus 1093 ~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~ 1167 (1490)
T TIGR01271 1093 ALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDG 1167 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876544333222222222111111111111 11112222 1233344333333334444566666777778889
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCC----------------CCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCC
Q 000856 331 GKAAGYKLMEIIKQKPSIIQDPTN----------------GRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGK 394 (1252)
Q Consensus 331 ~~~s~~ri~~~l~~~~~~~~~~~~----------------~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~ 394 (1252)
+..|.+|+.++++.+++....... .++..+..+.|+|+||+|+|++. .+++|+|+||+|++||
T Consensus 1168 ~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Ge 1246 (1490)
T TIGR01271 1168 LMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQ 1246 (1490)
T ss_pred HHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCC
Confidence 999999999999766543211000 00112345789999999999753 3569999999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHH
Q 000856 395 TVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVE 474 (1252)
Q Consensus 395 ~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~ 474 (1252)
++||||+||||||||+++|.|+++ ++|+|.+||.|+++++.+.+|++|+||||+|.||+||||+||.... ..++++++
T Consensus 1247 kvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~ 1324 (1490)
T TIGR01271 1247 RVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIW 1324 (1490)
T ss_pred EEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHH
Confidence 999999999999999999999997 7999999999999999999999999999999999999999997543 46899999
Q ss_pred HHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCe
Q 000856 475 AAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRT 554 (1252)
Q Consensus 475 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~t 554 (1252)
++++.+++.+++..+|+|+||.++++|.+||||||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|
T Consensus 1325 ~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~T 1404 (1490)
T TIGR01271 1325 KVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCT 1404 (1490)
T ss_pred HHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred EEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHHHH
Q 000856 555 TVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 555 vi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 603 (1252)
+|+||||++++..+|+|+||++|+|++.|+|++|+++++.|+++++.+.
T Consensus 1405 vI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1405 VILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred EEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 9999999999999999999999999999999999988888988876553
No 86
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.3e-67 Score=701.63 Aligned_cols=213 Identities=23% Similarity=0.420 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCC-CCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC---CCCceEEECCcccCCCCHHHH
Q 000856 1009 EIELRHVDFAYPSR-PDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD---PTAGKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~-~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~---p~~G~I~idG~di~~~~~~~l 1084 (1252)
.++++||+++|+.+ .++++|+|||++|++||++||+||||||||||+++|+|+.+ |++|+|.+||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 47999999999532 23469999999999999999999999999999999999998 78999999999985 257
Q ss_pred hcccEEEccccc-cCcccHHHHhccCC----C-CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1085 RLKIGLVQQEPA-LFAASIFDNIAYGK----E-GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1085 R~~i~~VpQd~~-lf~gTIreNl~~~~----~-~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
|++++||||++. ++..|+||||.++. + ..+++ .+.++++..++. +..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-------SYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhCCCeeCCCCCCCCHHHh
Confidence 899999999875 56789999998642 1 23333 345666666654 3468889988889999999
Q ss_pred HHHHHHHHHccCCC-EEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh--hccCEEEEEeCC-EEEEecC
Q 000856 1155 QRIAIARAVLKNPA-ILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTI--RGVDCIGVVQDG-RIVEQGS 1229 (1252)
Q Consensus 1155 QrlaLARALl~~p~-ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti--~~~DrI~vl~~G-~Ive~G~ 1229 (1252)
||++|||||+++|+ ||+||||||+||+.+...+++.|++.. +|+|||+++|+++.. ..+|+|++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999874 689999999999973 578999999997 9999998
Q ss_pred hhh
Q 000856 1230 HSE 1232 (1252)
Q Consensus 1230 ~~e 1232 (1252)
+.+
T Consensus 988 ~~~ 990 (1394)
T TIGR00956 988 LGE 990 (1394)
T ss_pred ccc
Confidence 743
No 87
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.7e-67 Score=658.81 Aligned_cols=572 Identities=21% Similarity=0.270 Sum_probs=447.6
Q ss_pred hcCCchHHHHHHhhch-hhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHH
Q 000856 20 KEQSLPFFQLFSFADK-YDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVC 98 (1252)
Q Consensus 20 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (1252)
+.+...+..+..|.+- ..+...++.+++.+..-.+.....+++..+.+.-...... . .....+.+++.+++++..
T Consensus 797 ~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~--~--~~~~~~~~vY~~l~~~~~ 872 (1381)
T KOG0054|consen 797 ETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT--T--VSTSFYLGVYALLGVASS 872 (1381)
T ss_pred hcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc--C--CCcchHHHHHHHHHHHHH
Confidence 4556667766667654 3333222222222222233333334566666542211100 0 112235566667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 99 FSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLV 178 (1252)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~ 178 (1252)
++..++.+.+...+.+....|+.++++++++.|++|||.. ++|+++||+++|++.+++-+...+..++..++.+++.++
T Consensus 873 ~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~ 951 (1381)
T KOG0054|consen 873 LLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV 951 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999976 799999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHH
Q 000856 179 VGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTL 258 (1252)
Q Consensus 179 ~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~ 258 (1252)
++.+..|...++++.+..+.+.+..+|.+..+...+-.....+-..+.+.|++.|+.|||+|+.++++.+++....+...
T Consensus 952 vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~ 1031 (1381)
T KOG0054|consen 952 VISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENS 1031 (1381)
T ss_pred HhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhH
Confidence 98888887766666666566666666666666554444444555689999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 259 KLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKL 338 (1252)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri 338 (1252)
+..+-.....-+..--+.++..+.+..+..+. .+...+..++|.+-..+.+.+.....++........+....+|.+|+
T Consensus 1032 ~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~-vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv 1110 (1381)
T KOG0054|consen 1032 RAFFLSISANRWLAVRLELLGNLVVLIAALFA-VLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERV 1110 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHH
Confidence 66543222221211122223222222211111 11112226677766666666666666667777778888889999999
Q ss_pred HHHHccCCCCC--CCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcc
Q 000856 339 MEIIKQKPSII--QDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERF 416 (1252)
Q Consensus 339 ~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~ 416 (1252)
.+..+.++|.+ .+...+++..+.+|.|+|+|++.+|... -+.||+|+||+|+|||++||||.+|||||||+++|-|+
T Consensus 1111 ~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl 1189 (1381)
T KOG0054|consen 1111 LEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRL 1189 (1381)
T ss_pred HHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHh
Confidence 99998665511 1111123445678999999999999754 35799999999999999999999999999999999999
Q ss_pred cCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCcccc
Q 000856 417 YDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQ 496 (1252)
Q Consensus 417 ~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 496 (1252)
.+|.+|+|.|||.|+.++.++.+|++++.+||||.||+||+|.|+-- ....+|++++++++.|++.+.++++|.|+|+.
T Consensus 1190 ~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDP-f~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~ 1268 (1381)
T KOG0054|consen 1190 VEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDP-FDEYSDDEIWEALERCQLKDVVSSLPGGLDSE 1268 (1381)
T ss_pred cCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCc-ccccCHHHHHHHHHHhChHHHHhhCCcCCCce
Confidence 99999999999999999999999999999999999999999999852 23578999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeC
Q 000856 497 VGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQ 576 (1252)
Q Consensus 497 ~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 576 (1252)
+.|+|.|+|-||||-+||||||+++++||+|||+|+++|++|...|++.|++..+++|||.|+||++++.++|||+|||+
T Consensus 1269 v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~ 1348 (1381)
T KOG0054|consen 1269 VSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDA 1348 (1381)
T ss_pred ecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecChHHHHhcc-cchHHHH
Q 000856 577 GQVVETGTHEELIAKA-GAYASLI 599 (1252)
Q Consensus 577 G~i~~~g~~~~l~~~~-~~~~~~~ 599 (1252)
|+++|.|+|.+|+++. +.|+.+.
T Consensus 1349 G~v~EfdsP~~Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1349 GRVVEFDSPAELLSDKDSLFSSLL 1372 (1381)
T ss_pred CeEeecCChHHHHhCCcchHHHHH
Confidence 9999999999999874 5554443
No 88
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.6e-67 Score=646.99 Aligned_cols=484 Identities=22% Similarity=0.300 Sum_probs=339.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ +..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.++
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 5899999999962 24599999999999999999999999999999999999999999999975 2369
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCC----------------CH----------HHHHHHHH-------HhcHHHHHhhC
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEA----------------TM----------AEVEAAAS-------AANAHSFITLL 489 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~----------------~~----------~~~~~~~~-------~~~~~~~~~~~ 489 (1252)
+||+|+|.+++. |++||+.++.... .. .++.+.+. ...+.+.++.+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999998876 9999998753100 00 00000010 11122334444
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-c
Q 000856 490 PNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-V 568 (1252)
Q Consensus 490 ~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~ 568 (1252)
|++ .......+|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 553 2467788999999999999999999999999999999999999999999998873 599999999999977 7
Q ss_pred CEEEEEeCCEEE-EecChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCcccc
Q 000856 569 DTVAVIQQGQVV-ETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYS 647 (1252)
Q Consensus 569 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (1252)
|+|++|++|+++ ..|+++++.+..... . ......
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~~~~--~-~~~~~~------------------------------------------ 262 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQKAKR--L-AQEEKQ------------------------------------------ 262 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHHHHH--H-HHHHHH------------------------------------------
Confidence 999999999986 678777654321000 0 000000
Q ss_pred CCCCcccccccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhh
Q 000856 648 TGADGRIEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKT 727 (1252)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1252)
+.
T Consensus 263 -------------------------~~----------------------------------------------------- 264 (556)
T PRK11819 263 -------------------------EA----------------------------------------------------- 264 (556)
T ss_pred -------------------------HH-----------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHH
Q 000856 728 KEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADR 807 (1252)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~ 807 (1252)
+.++.+ .++
T Consensus 265 ----------------------------------~~~~~~-~~~------------------------------------ 273 (556)
T PRK11819 265 ----------------------------------ARQKAL-KRE------------------------------------ 273 (556)
T ss_pred ----------------------------------HHHHHH-HHH------------------------------------
Confidence 000000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhcc
Q 000856 808 ISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNA 887 (1252)
Q Consensus 808 ~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 887 (1252)
...... ..... ++ ..
T Consensus 274 --------------------------------------------------~~~~~~--~~~~~------------~~-~~ 288 (556)
T PRK11819 274 --------------------------------------------------LEWVRQ--SPKAR------------QA-KS 288 (556)
T ss_pred --------------------------------------------------HHHHHH--hhhhh------------HH-HH
Confidence 000000 00000 00 00
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000856 888 QNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETV 967 (1252)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1252)
+ ...
T Consensus 289 ~-~~~--------------------------------------------------------------------------- 292 (556)
T PRK11819 289 K-ARL--------------------------------------------------------------------------- 292 (556)
T ss_pred H-HHH---------------------------------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCC
Q 000856 968 SLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGAS 1047 (1252)
Q Consensus 968 ~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~S 1047 (1252)
...++..+.....................+.-|+++||+++|++ .++|+|+||+|++||++||+|+|
T Consensus 293 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~N 359 (556)
T PRK11819 293 ----------ARYEELLSEEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPN 359 (556)
T ss_pred ----------HHHHHhhcccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCC
Confidence 00000000000000000000000000111235999999999953 35999999999999999999999
Q ss_pred CCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEcccc-ccCc-ccHHHHhccCCCC----CCHHHHHHH
Q 000856 1048 GSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEP-ALFA-ASIFDNIAYGKEG----ATEAEVVEA 1121 (1252)
Q Consensus 1048 GSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~-~lf~-gTIreNl~~~~~~----~~deei~~a 1121 (1252)
|||||||+++|+|+++|++|+|.+++ + .+++|+||++ .++. .|+++|+.++... ..+++..++
T Consensus 360 GsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 428 (556)
T PRK11819 360 GAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAY 428 (556)
T ss_pred CCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHH
Confidence 99999999999999999999999954 2 1599999997 5554 5999999865321 123344556
Q ss_pred HHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEE
Q 000856 1122 ARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTV 1201 (1252)
Q Consensus 1122 l~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI 1201 (1252)
++..++.+. ..+.++ ..||||||||++||||++.+|++|||||||++||+.+...+.+.|++. . .|||
T Consensus 429 l~~~~l~~~------~~~~~~----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi 496 (556)
T PRK11819 429 VGRFNFKGG------DQQKKV----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAV 496 (556)
T ss_pred HHhCCCChh------HhcCch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEE
Confidence 666665321 123333 469999999999999999999999999999999999999999999886 3 4899
Q ss_pred EEecCchhhhc-cCEEEEEeC-CEEEE-ecChhhhhcC
Q 000856 1202 LVAHRLSTIRG-VDCIGVVQD-GRIVE-QGSHSELVSR 1236 (1252)
Q Consensus 1202 ~IaHrl~ti~~-~DrI~vl~~-G~Ive-~G~~~eLl~~ 1236 (1252)
+|||+++.+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 497 ~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 497 VISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred EEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99999998865 899999996 88874 6788877654
No 89
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.6e-66 Score=641.45 Aligned_cols=482 Identities=24% Similarity=0.342 Sum_probs=337.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +..|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 23589999999999999999999999999999999999999999999975 2469
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCC-----------------CCH---------HHHHHHHHHhc-------HHHHHhhC
Q 000856 444 GLVNQEPALFAT-TILENILYGKPE-----------------ATM---------AEVEAAASAAN-------AHSFITLL 489 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~-----------------~~~---------~~~~~~~~~~~-------~~~~~~~~ 489 (1252)
+||+|+|++++. |++||+.++... ... .++.+.++.++ +.+.++.+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998865 999999875310 000 11222222222 22233333
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-c
Q 000856 490 PNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-V 568 (1252)
Q Consensus 490 ~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~ 568 (1252)
|++. .+..+.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++. +.|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4432 46677899999999999999999999999999999999999999999999886 3699999999999977 7
Q ss_pred CEEEEEeCCEEE-EecChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCcccc
Q 000856 569 DTVAVIQQGQVV-ETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYS 647 (1252)
Q Consensus 569 d~i~~l~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (1252)
|+|++|++|+++ ..|+++++.+.... .. ..+...
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~~~--~~-~~~~~~------------------------------------------ 260 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQKEK--RL-EQEEKE------------------------------------------ 260 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHHHH--HH-HHHHHH------------------------------------------
Confidence 999999999975 67887766432100 00 000000
Q ss_pred CCCCcccccccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhh
Q 000856 648 TGADGRIEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKT 727 (1252)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1252)
+
T Consensus 261 -------------------------~------------------------------------------------------ 261 (552)
T TIGR03719 261 -------------------------E------------------------------------------------------ 261 (552)
T ss_pred -------------------------H------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHH
Q 000856 728 KEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADR 807 (1252)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~ 807 (1252)
.+..+++ .+.
T Consensus 262 ---------------------------------~~~~~~~-----------------------~~~-------------- 271 (552)
T TIGR03719 262 ---------------------------------SARQKAL-----------------------KRE-------------- 271 (552)
T ss_pred ---------------------------------HHHHHHH-----------------------HHH--------------
Confidence 0000000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhcc
Q 000856 808 ISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNA 887 (1252)
Q Consensus 808 ~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 887 (1252)
..| .+. .... .
T Consensus 272 --------------------~~~-----------------------~~~------~~~~---~----------------- 282 (552)
T TIGR03719 272 --------------------LEW-----------------------VRS------SPKA---R----------------- 282 (552)
T ss_pred --------------------HHH-----------------------HHh------hhhh---H-----------------
Confidence 000 000 0000 0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000856 888 QNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETV 967 (1252)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1252)
+.....+.
T Consensus 283 ~~~~~~~~------------------------------------------------------------------------ 290 (552)
T TIGR03719 283 QAKSKARL------------------------------------------------------------------------ 290 (552)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHHHHH-HhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcC
Q 000856 968 SLAPEIIRGGESVGSVFS-TLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGA 1046 (1252)
Q Consensus 968 ~~~~~~~~~~~s~~ri~~-~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~ 1046 (1252)
...++..+ .....++......+ ......+.-++++|++++|++ .++|+|+||+|++||++||+|+
T Consensus 291 ----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~ 356 (552)
T TIGR03719 291 ----------ARYEELLSQEFQKRNETAEIYIP-PGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGP 356 (552)
T ss_pred ----------HHHHhhhhhcccccCCCceeecC-CCCCCCCeEEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECC
Confidence 00000000 00000000000000 000011235999999999963 3599999999999999999999
Q ss_pred CCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccc-cC-cccHHHHhccCCCC--C--CHHHHHH
Q 000856 1047 SGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPA-LF-AASIFDNIAYGKEG--A--TEAEVVE 1120 (1252)
Q Consensus 1047 SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~-lf-~gTIreNl~~~~~~--~--~deei~~ 1120 (1252)
||||||||+++|+|+.+|++|+|.+++ + .+|+|+||++. ++ ..|+++|+.++... . .+.+..+
T Consensus 357 NGsGKSTLl~~l~G~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 425 (552)
T TIGR03719 357 NGAGKSTLFRMITGQEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRA 425 (552)
T ss_pred CCCCHHHHHHHHcCCCCCCCeEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHH
Confidence 999999999999999999999999954 2 16999999973 55 46999999875321 1 1333445
Q ss_pred HHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeE
Q 000856 1121 AARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTT 1200 (1252)
Q Consensus 1121 al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~Tv 1200 (1252)
+++..++.+.. .+.++ ..||||||||++|||||+.+|++|||||||++||+.+...+.+.|++.. .||
T Consensus 426 ~l~~~~l~~~~------~~~~~----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~v 493 (552)
T TIGR03719 426 YVGRFNFKGSD------QQKKV----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA--GCA 493 (552)
T ss_pred HHHhCCCChhH------hcCch----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC--CeE
Confidence 55665553211 22333 4699999999999999999999999999999999999999999999873 489
Q ss_pred EEEecCchhhhc-cCEEEEEeC-CEEEE-ecChhhhhc
Q 000856 1201 VLVAHRLSTIRG-VDCIGVVQD-GRIVE-QGSHSELVS 1235 (1252)
Q Consensus 1201 I~IaHrl~ti~~-~DrI~vl~~-G~Ive-~G~~~eLl~ 1235 (1252)
|+|||+++.+.. ||+|++|++ |++++ .|+++++.+
T Consensus 494 iivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 494 VVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred EEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 999999998865 899999997 68874 477776654
No 90
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.2e-65 Score=569.61 Aligned_cols=535 Identities=24% Similarity=0.286 Sum_probs=450.3
Q ss_pred HHHHHHHHHHHHHH--HhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 38 WCLMIFGSLGAVIH--GSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQ 115 (1252)
Q Consensus 38 ~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1252)
..++.++.+.++++ .+..|+ |+-++.|.+..+.+-+ .+..+.++.+++.++..++.+++.....+.+.++
T Consensus 23 ~a~~~v~lfS~~INiL~L~~~l---yMLQVyDRVL~S~s~~-----TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~l 94 (580)
T COG4618 23 RAFIGVGLFSAVINLLALTGPL---YMLQVYDRVLPSRSVP-----TLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERL 94 (580)
T ss_pred hHHHHHHHHHHHHHHHHHhhhH---HHHHHHhhhccCCCcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444432 344455 4567888877654222 2333444555666777789999999999999999
Q ss_pred HHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000856 116 VSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISE-KVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAV 194 (1252)
Q Consensus 116 ~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~ 194 (1252)
...+...+|...++.+.... ..|+=..-+ +|.++++.|++. ....++...|+++. +.++|.++++++++.++.
T Consensus 95 D~~L~~~v~~a~~~~~l~~~----~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P~y-l~v~fl~Hp~lG~~a~~g 168 (580)
T COG4618 95 DRQLNGPVFAASFSAPLLRR----GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMPLY-LAVIFLFHPWLGLIALAG 168 (580)
T ss_pred HHHhccHHHHHHHhhHHhhc----CCCccccch-hhHHHHHHHHcCCCcchhcCCchHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999999999987776532 234333333 699999999987 55666777777665 566788888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 195 IPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGC 274 (1252)
Q Consensus 195 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1252)
..++..+..+--+..++-.++..+...+.+....-+..|.++|++.|......++|.+.+.++.....+..-..+....+
T Consensus 169 a~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~ 248 (580)
T COG4618 169 AIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGAL 248 (580)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 66666666666677777777788888888999999999999999999999999999999988888877766666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCC
Q 000856 275 TYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPSIIQDPTN 354 (1252)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~ 354 (1252)
.-.+-++....++..|++++.+|++|+|.+++....+-....|+-.....+..+..++.|.+|+.+++...|...+
T Consensus 249 Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~---- 324 (580)
T COG4618 249 SRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE---- 324 (580)
T ss_pred HHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----
Confidence 6666667777888899999999999999998887667777779989999999999999999999999988765321
Q ss_pred CCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC
Q 000856 355 GRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL 434 (1252)
Q Consensus 355 ~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~ 434 (1252)
.-+.++..+.+.++++++.=|+. ++++++|+||++.+||.++||||||||||||.|+|.|.++|.+|.|.+||.|++++
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qW 403 (580)
T COG4618 325 RMPLPAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQW 403 (580)
T ss_pred CCCCCCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcC
Confidence 22334456789999999976654 57899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 435 QLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 435 ~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
+.+.+-++|||.||+..||+|||.|||.-..++.+.+.+.++++.++.||.|.++|+||||.+|+.|..|||||||||+|
T Consensus 404 d~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaL 483 (580)
T COG4618 404 DREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIAL 483 (580)
T ss_pred CHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHH
Confidence 99999999999999999999999999986566788899999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||.+|.+++||||-|+||.+.|..+.++|...+ +|.|+|+||||++.+..+|+|++|++|++...|+.+|++++
T Consensus 484 ARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 484 ARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999999999999886 59999999999999999999999999999999999998765
No 91
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-64 Score=622.99 Aligned_cols=473 Identities=18% Similarity=0.233 Sum_probs=377.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 742 VVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTS 821 (1252)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~ 821 (1252)
.++.++..++..+.+.++..++|.++++++++.|++||++ +++|++++|+++|++.+...+. .++.++.+++.++++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~ 138 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGS 138 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 4456678888888999999999999999999999999974 8899999999999999998765 477788888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccH---HHHHHHHHHH
Q 000856 822 FIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQ---NKILSLFCHE 898 (1252)
Q Consensus 822 ~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~---~~~~~~~~~~ 898 (1252)
++++++++|.+++++++++|+.+++.++..+..++..++..+..++....+.|.++|+++++ ++.+ +.+.+++.+.
T Consensus 139 ~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~ 217 (547)
T PRK10522 139 AAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPD 217 (547)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHH
Confidence 99999999999999999999888887777777777777888889999999999999999995 4443 3566777777
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 899 LRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGE 978 (1252)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1252)
.++..+...+.....................+.++++..+ +..+.+....+..+......|+..+.....++..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~ 294 (547)
T PRK10522 218 AQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQV 294 (547)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666655554443333322222222222222222222221 1123333333333344456789999999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHH
Q 000856 979 SVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALI 1058 (1252)
Q Consensus 979 s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL 1058 (1252)
+.+|+.++.+.+++.+... ..+ .+..+.|+++||+|+|+++ .++|+|+||+|+|||++|||||||||||||+++|
T Consensus 295 a~~ri~~l~~~~~~~~~~~--~~~-~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll 369 (547)
T PRK10522 295 AFNKLNKLALAPYKAEFPR--PQA-FPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLL 369 (547)
T ss_pred HHHHHHHHhcccccccccc--ccc-cCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999999875433211111 111 1113579999999999742 3699999999999999999999999999999999
Q ss_pred hccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcC
Q 000856 1059 ERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAY 1138 (1252)
Q Consensus 1059 ~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gl 1138 (1252)
+|+|+|++|+|++||+|+++++.+.+|++++||||||.+|++|+++| + +..++++++++++.+++.+++.. ++|.
T Consensus 370 ~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 444 (547)
T PRK10522 370 TGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR 444 (547)
T ss_pred hCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC
Confidence 99999999999999999999999999999999999999999999999 2 35788899999999988876652 4442
Q ss_pred CCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEE
Q 000856 1139 KTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCI 1216 (1252)
Q Consensus 1139 dt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI 1216 (1252)
.+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||+|
T Consensus 445 -----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i 519 (547)
T PRK10522 445 -----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRL 519 (547)
T ss_pred -----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEE
Confidence 1478999999999999999999999999999999999999999999997654 489999999999999999999
Q ss_pred EEEeCCEEEEe-cChhhhhcC
Q 000856 1217 GVVQDGRIVEQ-GSHSELVSR 1236 (1252)
Q Consensus 1217 ~vl~~G~Ive~-G~~~eLl~~ 1236 (1252)
++|++|+++|. |++.+-..+
T Consensus 520 ~~l~~G~i~e~~~~~~~~~~~ 540 (547)
T PRK10522 520 LEMRNGQLSELTGEERDAASR 540 (547)
T ss_pred EEEECCEEEEecCCchhhhhh
Confidence 99999999987 566554443
No 92
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-65 Score=636.80 Aligned_cols=199 Identities=26% Similarity=0.417 Sum_probs=167.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999953 36999999999999999999999999999999999999999999999741 269
Q ss_pred EEEcccc--ccC-cccHHHHhccCCCCCCHHHHHHHHHHcCchh-hHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1089 GLVQQEP--ALF-AASIFDNIAYGKEGATEAEVVEAARAANVHG-FVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1089 ~~VpQd~--~lf-~gTIreNl~~~~~~~~deei~~al~~~~l~~-~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
+|+||++ .+. ..|+.+++....+...++++.+.++..++.+ .. +.++ ..||||||||++||||++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~-------~~~~----~~LSgGekqRl~La~~l~ 446 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKV-------TEET----RRFSGGEKARLVLALIVW 446 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHh-------cCch----hhCCHHHHHHHHHHHHHh
Confidence 9999985 233 3478888742223334566777777777642 22 3334 469999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEE-EecChhhhh
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIV-EQGSHSELV 1234 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv-e~G~~~eLl 1234 (1252)
++|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 447 ~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 447 QRPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 999999999999999999999999999986 3 599999999999865 8999999999997 678888874
No 93
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3.2e-63 Score=612.87 Aligned_cols=468 Identities=19% Similarity=0.208 Sum_probs=368.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 97 VCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAG 176 (1252)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~ 176 (1252)
..++.+++.++..+.+.++..++|.+++++++++|+++|++. ++|++++|+++|++.+..++. .++.++..++.+++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~ 138 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGS 138 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 345677888888999999999999999999999999999865 899999999999999998776 477788888888999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcch---HHHHHHHHHH
Q 000856 177 LVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGE---SKALNSYSDA 253 (1252)
Q Consensus 177 ~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e---~~~~~~~~~~ 253 (1252)
++++++++|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.+++++.
T Consensus 139 ~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~ 217 (547)
T PRK10522 139 AAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPD 217 (547)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHH
Confidence 99999999999999999999988888888999888888889999999999999999999996 4433 4567888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 254 IQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKA 333 (1252)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 333 (1252)
.++..+...+..........+...+......+.+++++.. +..+.+.+..+.+..+....|+..+...+..++++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~ 294 (547)
T PRK10522 218 AQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQV 294 (547)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766655544443332222222222222223333221 1122223222222233344688888888999999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHH
Q 000856 334 AGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLI 413 (1252)
Q Consensus 334 s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l 413 (1252)
+.+|+.++++.+++.+..+ ....+ ..+.++++|++|+|+++ .++|+|+||+|++||+++|+||||||||||+++|
T Consensus 295 a~~ri~~l~~~~~~~~~~~--~~~~~-~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll 369 (547)
T PRK10522 295 AFNKLNKLALAPYKAEFPR--PQAFP-DWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLL 369 (547)
T ss_pred HHHHHHHHhcccccccccc--ccccC-cCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999999876443211111 11111 12469999999999742 3589999999999999999999999999999999
Q ss_pred hcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCc
Q 000856 414 ERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGY 493 (1252)
Q Consensus 414 ~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 493 (1252)
+|+++|++|+|.+||+|+++.+...+|++++||+|+|.+|++|+++| + +..+++++.++++..++.+++.. ++|.
T Consensus 370 ~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 444 (547)
T PRK10522 370 TGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR 444 (547)
T ss_pred hCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC
Confidence 99999999999999999999999999999999999999999999999 2 33445555555555544433321 2221
Q ss_pred cccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEE
Q 000856 494 STQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTV 571 (1252)
Q Consensus 494 ~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i 571 (1252)
.+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.+.. +++|+|+||||++.+..||+|
T Consensus 445 -----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i 519 (547)
T PRK10522 445 -----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRL 519 (547)
T ss_pred -----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEE
Confidence 1378999999999999999999999999999999999999999999987653 489999999999999999999
Q ss_pred EEEeCCEEEEe-cCh
Q 000856 572 AVIQQGQVVET-GTH 585 (1252)
Q Consensus 572 ~~l~~G~i~~~-g~~ 585 (1252)
++|++|++++. |++
T Consensus 520 ~~l~~G~i~e~~~~~ 534 (547)
T PRK10522 520 LEMRNGQLSELTGEE 534 (547)
T ss_pred EEEECCEEEEecCCc
Confidence 99999999876 443
No 94
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-65 Score=588.18 Aligned_cols=462 Identities=24% Similarity=0.415 Sum_probs=357.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 442 (1252)
-++++|++++|+. +.+|+|+||++++||++|++|+||+|||||+|+|+|.|+|++|+|.+||+++...++.. ....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 5899999999974 56999999999999999999999999999999999999999999999999998777654 5557
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCC-HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEAT-MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
|+.|+||..|++. ||.|||.+|.+... .-.+++......+.+.++.+ |++........+||+||||-|+||||+..
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARL--GLDIDPDTLVGDLSIAQRQMVEIARALSF 162 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHc--CCCCChhhhhhhCCHHHHHHHHHHHHHhc
Confidence 9999999999976 99999999876432 11111111122223445544 43323666777999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecCh-HHHHhcccchHH
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTH-EELIAKAGAYAS 597 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~-~~l~~~~~~~~~ 597 (1252)
+++|+|||||||+|+....+.+++.+++++ +|.++|+||||++++.. ||||.||+||+.+..++. .++-.
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~------- 235 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE------- 235 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH-------
Confidence 999999999999999999999999999996 69999999999999977 899999999999875431 11000
Q ss_pred HHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchHHHHHH
Q 000856 598 LIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLL 677 (1252)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1252)
+ .+
T Consensus 236 -------------------------------------------------------------~---------------~l- 238 (500)
T COG1129 236 -------------------------------------------------------------D---------------EL- 238 (500)
T ss_pred -------------------------------------------------------------H---------------HH-
Confidence 0 00
Q ss_pred HhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 678 KLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGE 757 (1252)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1252)
+..+.
T Consensus 239 ----------------------------------v~~Mv----------------------------------------- 243 (500)
T COG1129 239 ----------------------------------VRLMV----------------------------------------- 243 (500)
T ss_pred ----------------------------------HHHhh-----------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 758 NLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLIL 837 (1252)
Q Consensus 758 ~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l 837 (1252)
+
T Consensus 244 ---------------------------G---------------------------------------------------- 244 (500)
T COG1129 244 ---------------------------G---------------------------------------------------- 244 (500)
T ss_pred ---------------------------C----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000856 838 GTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILF 917 (1252)
Q Consensus 838 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1252)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 000856 918 GISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDD 997 (1252)
Q Consensus 918 ~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~ 997 (1252)
| +.-+..+. .+
T Consensus 245 ----------------------------------------------------------------r--~~~~~~~~-~~-- 255 (500)
T COG1129 245 ----------------------------------------------------------------R--ELEDLFPE-PP-- 255 (500)
T ss_pred ----------------------------------------------------------------c--chhhhccc-cc--
Confidence 0 00000000 00
Q ss_pred CCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC
Q 000856 998 PDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR 1077 (1252)
Q Consensus 998 ~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~ 1077 (1252)
.. ......++++|++..- .++|+||++++||++||.|-=|||+|-++++|+|..++.+|+|.+||.++.
T Consensus 256 ~~----~~~~~~l~v~~l~~~~-------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~ 324 (500)
T COG1129 256 EE----GIGEPVLEVRNLSGGG-------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVR 324 (500)
T ss_pred cc----CCCCcEEEEecCCCCC-------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEcc
Confidence 00 0111247788876421 589999999999999999999999999999999999999999999999887
Q ss_pred CCCHH-HHhcccEEEccccc----cCcccHHHHhccCC-CCCCHH-HHHHHHHHcCchhhHhhCC---CcCCCccCCCCC
Q 000856 1078 RLNLK-SLRLKIGLVQQEPA----LFAASIFDNIAYGK-EGATEA-EVVEAARAANVHGFVSALP---NAYKTPVGERGV 1147 (1252)
Q Consensus 1078 ~~~~~-~lR~~i~~VpQd~~----lf~gTIreNl~~~~-~~~~de-ei~~al~~~~l~~~i~~lp---~gldt~vge~G~ 1147 (1252)
--++. ..+..|+|||.|.. +...||++|+.+.. ...+.. -+....++....+++..+. .+.+.+++
T Consensus 325 ~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~---- 400 (500)
T COG1129 325 IRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIG---- 400 (500)
T ss_pred CCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhh----
Confidence 66644 78999999999874 55789999998751 111100 1223333344445555542 23455554
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEE
Q 000856 1148 QLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIV 1225 (1252)
Q Consensus 1148 ~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Iv 1225 (1252)
+||||.+|+++|||+|..+|+||||||||.++|..+.+.|++.|+++. +|.+||+||..++++. .||||+||.+|+|+
T Consensus 401 ~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~ 480 (500)
T COG1129 401 TLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIV 480 (500)
T ss_pred cCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEE
Confidence 699999999999999999999999999999999999999999999986 6899999999999885 79999999999998
Q ss_pred EecChhh
Q 000856 1226 EQGSHSE 1232 (1252)
Q Consensus 1226 e~G~~~e 1232 (1252)
..=+.++
T Consensus 481 ~e~~~~~ 487 (500)
T COG1129 481 GELDREE 487 (500)
T ss_pred EEecccc
Confidence 7544433
No 95
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=9.4e-64 Score=660.61 Aligned_cols=213 Identities=22% Similarity=0.384 Sum_probs=177.7
Q ss_pred cEEEEeEEEECCCC----------CCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC--CCceEEECCccc
Q 000856 1009 EIELRHVDFAYPSR----------PDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP--TAGKVMIDGKDI 1076 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~----------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p--~~G~I~idG~di 1076 (1252)
.+.|+||++..+.. ....+|+|+|++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999987421 123699999999999999999999999999999999999873 789999999886
Q ss_pred CCCCHHHHhcccEEEccccccCc-ccHHHHhccCC----C-CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCC
Q 000856 1077 RRLNLKSLRLKIGLVQQEPALFA-ASIFDNIAYGK----E-GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERG 1146 (1252)
Q Consensus 1077 ~~~~~~~lR~~i~~VpQd~~lf~-gTIreNl~~~~----~-~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G 1146 (1252)
++ ..+|+.++||+|++.++. .|++|||.++. + ..+.+ .+.++++..++.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 42 456788999999987665 69999997641 1 22332 25667777776543 466676544
Q ss_pred -CCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchh-h-hccCEEEEEeC-
Q 000856 1147 -VQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLST-I-RGVDCIGVVQD- 1221 (1252)
Q Consensus 1147 -~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t-i-~~~DrI~vl~~- 1221 (1252)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|||+++|+++. + ..+|++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6799999999999999999999999999999999999999999999875 58999999999984 4 67899999996
Q ss_pred CEEEEecChh
Q 000856 1222 GRIVEQGSHS 1231 (1252)
Q Consensus 1222 G~Ive~G~~~ 1231 (1252)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=8.8e-64 Score=624.83 Aligned_cols=200 Identities=28% Similarity=0.458 Sum_probs=165.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|+++||+++|++ .++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999963 35999999999999999999999999999999999999999999999 4332 59
Q ss_pred EEEcccc-ccCc-ccHHHHhccCCCCC--C--HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1089 GLVQQEP-ALFA-ASIFDNIAYGKEGA--T--EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1089 ~~VpQd~-~lf~-gTIreNl~~~~~~~--~--deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
+|++|++ .++. .|+++|+.++.+.. . +.++.+.++..++.+ +..+.++ ..||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhChh----hhCCHHHHHHHHHHHH
Confidence 9999986 3554 59999998653221 1 344555566655531 1123444 3599999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEe-CCEEEEe-cChhhhh
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQ-DGRIVEQ-GSHSELV 1234 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~-~G~Ive~-G~~~eLl 1234 (1252)
++.+|++|||||||++||..+...+.+.|++. +.|||+|||+++.+. -||+|++|+ +|+|.++ |++++.+
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 99999999999999999999999999999876 469999999999886 489999998 8999875 6777664
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.5e-64 Score=623.16 Aligned_cols=200 Identities=29% Similarity=0.469 Sum_probs=165.4
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
.-++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.+++ +.+
T Consensus 507 ~~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 507 PIISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred ceEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 359999999999532 3589999999999999999999999999999999999999999999875 357
Q ss_pred cEEEccccccCcccHHHHhcc----CCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHH
Q 000856 1088 IGLVQQEPALFAASIFDNIAY----GKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAV 1163 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~----~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARAL 1163 (1252)
++|+||++. ...++.+|... ..+..+++++.++++..++.+... +.+ ...||||||||++||||+
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~------~~~----~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLA------LQP----MYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHh------cCC----ccccCHHHHHHHHHHHHH
Confidence 999999973 22345555321 123456778888888888853211 122 346999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEE-EecChhhh
Q 000856 1164 LKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIV-EQGSHSEL 1233 (1252)
Q Consensus 1164 l~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv-e~G~~~eL 1233 (1252)
+++|++|||||||++||+.+...+.+.+.+. + .|||+|||+++.+.. ||+|++|++|+++ ..|++++.
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 9999999999999999999999999999875 3 499999999999865 8999999999998 56777654
No 98
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.9e-61 Score=600.92 Aligned_cols=530 Identities=15% Similarity=0.118 Sum_probs=431.1
Q ss_pred HHHHHHhhchhhH----HHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000856 26 FFQLFSFADKYDW----CLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSS 101 (1252)
Q Consensus 26 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1252)
++++++|..|+.+ ..+++.+++.++...+....+++.+.++|.+...+ ...+...+..++++++++.++..+..
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~--~~~f~~~l~~~~l~~~~~~~~~~~~~ 156 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS--PRNFAWILFKWFLIAPPASFINSAIK 156 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777654 24556666666666777777778899999876432 22222223334444555566666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 102 YAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF 181 (1252)
Q Consensus 102 ~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 181 (1252)
|+..++......++..++|.+++++....++.+||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.++.++
T Consensus 157 ~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~ 234 (659)
T TIGR00954 157 YLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLL 234 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888999999999999988888999984 689999999999999999999999999999999988888777
Q ss_pred H-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHHH
Q 000856 182 V-SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKL 260 (1252)
Q Consensus 182 ~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~ 260 (1252)
. ++|.+++++++.+|+..++..++.+++.+...+.++..++..+...|.++|+++||+|+.|+.+.+++.+..++..+.
T Consensus 235 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~ 314 (659)
T TIGR00954 235 TALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEH 314 (659)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-c----CccCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHH
Q 000856 261 GYKAGMAKGLGLGCTYGIACM--SWALVFWYAGVFIR-N----GVTDGGKAFTA-IFS---AIVGGMSLGQSFSNLGAFS 329 (1252)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~-~----~~~~~~~~~~~-~~~---~~~~~~~l~~~~~~~~~~~ 329 (1252)
..+..++.+...++..++... ..++.++.|...+. . |.+|.|..+.. +.+ +.....|+..+...+..++
T Consensus 315 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~ 394 (659)
T TIGR00954 315 LNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMT 394 (659)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888777777666542 22222333343332 2 67888876553 222 2334568888888899999
Q ss_pred HHHHHHHHHHHHHccCCCCCC---------CCCCC-------------CcCCCCcccEEEEeEEEECCCCCCCcccccee
Q 000856 330 KGKAAGYKLMEIIKQKPSIIQ---------DPTNG-------------RCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFS 387 (1252)
Q Consensus 330 ~~~~s~~ri~~~l~~~~~~~~---------~~~~~-------------~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~ 387 (1252)
++.++.+|+.++++.+++... +.... .......+.|+++|++|+|+++ .++|+|+|
T Consensus 395 ~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~is 472 (659)
T TIGR00954 395 RLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecce
Confidence 999999999999975432110 00000 0011123469999999999742 35899999
Q ss_pred EEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCC--
Q 000856 388 IFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGK-- 465 (1252)
Q Consensus 388 l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~-- 465 (1252)
|++++||+++|+||||||||||+++|+|+++|++|+|.+++ +++++||+|+|+++++|++||+.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999875 46799999999999999999999874
Q ss_pred -----CCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHH
Q 000856 466 -----PEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSES 540 (1252)
Q Consensus 466 -----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~ 540 (1252)
+..+++++.++++.+++.++++. |.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 23456788889999999998877 899999876 57799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeC
Q 000856 541 IVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQ 576 (1252)
Q Consensus 541 ~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 576 (1252)
.+.+.+++. |+|+|+||||++.+..||++++|+.
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999774 8999999999999999999999973
No 99
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.6e-63 Score=608.08 Aligned_cols=192 Identities=23% Similarity=0.320 Sum_probs=163.8
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-++++|++++|.+ ..|+++||+|++||++||+|+||||||||+++|+|+.+|++|+|.++ .++
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 4899999999952 25999999999999999999999999999999999999999999986 159
Q ss_pred EEEcccccc-CcccHHHHhccCCCCC-CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1089 GLVQQEPAL-FAASIFDNIAYGKEGA-TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1089 ~~VpQd~~l-f~gTIreNl~~~~~~~-~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
+|+||++.+ +..|+++|+.++.... .+..+.++++..++.+... .++ ..||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-------~~~----~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-------KNV----KDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-------CCc----ccCCHHHHHHHHHHHHHhcC
Confidence 999999864 5679999998653222 2344567788887765433 333 46999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000856 1167 PAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~ 1229 (1252)
|++|||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999999999999999999999998753 7899999999998864 899999975 8877776
No 100
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.4e-62 Score=550.42 Aligned_cols=465 Identities=26% Similarity=0.459 Sum_probs=363.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH-HHHhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL-RWLRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~~~ 442 (1252)
.++++|++++|| ...+++||||++++||++||+|+||+|||||+++|.|+|+|++|+|++||++++-.++ +..+..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999997 4569999999999999999999999999999999999999999999999999987665 467778
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
||+|.|++.|++. ||.|||.+|.+......+........+.+..+.+ |++-...+...+||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999977 9999999997643111111111222233444555 777788888999999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcccchHHHH
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKAGAYASLI 599 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 599 (1252)
|++||||||||-|-|...+.+++.++++. .|+|||+|||++.++.. |||+-||++|+++...++ .
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~----------- 225 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V----------- 225 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C-----------
Confidence 99999999999999999999999999986 59999999999999987 899999999998643210 0
Q ss_pred HHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcccccccccccccCCCCCchHHHHHHHh
Q 000856 600 RFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLLKL 679 (1252)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1252)
.. . .. . .+.
T Consensus 226 ----------------~~------------------------~------t~-~----------------------ela-- 234 (501)
T COG3845 226 ----------------AE------------------------T------TE-E----------------------ELA-- 234 (501)
T ss_pred ----------------CC------------------------C------CH-H----------------------HHH--
Confidence 00 0 00 0 000
Q ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 680 NAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENL 759 (1252)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (1252)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T COG3845 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 760 TTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGT 839 (1252)
Q Consensus 760 ~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~l~~l~~ 839 (1252)
++
T Consensus 235 --------------------------------~l---------------------------------------------- 236 (501)
T COG3845 235 --------------------------------EL---------------------------------------------- 236 (501)
T ss_pred --------------------------------HH----------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000856 840 YPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGI 919 (1252)
Q Consensus 840 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1252)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 000856 920 SQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPD 999 (1252)
Q Consensus 920 ~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~~~~~~~~~ 999 (1252)
++.. .+ ....+
T Consensus 237 ------------------MvG~-~v-------------------------------------------~~~~~------- 247 (501)
T COG3845 237 ------------------MVGR-EV-------------------------------------------VLRVV------- 247 (501)
T ss_pred ------------------hcCC-cc-------------------------------------------ccccc-------
Confidence 0000 00 00000
Q ss_pred CCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCccc-CC
Q 000856 1000 AEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDI-RR 1078 (1252)
Q Consensus 1000 ~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di-~~ 1078 (1252)
..+..|.+.-++++|++..-+ + +.+.+++|||++++||++||.|-.|.|-+.|+.+|+|+.+|.+|+|.++|.|+ ..
T Consensus 248 ~~~~~pg~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~ 325 (501)
T COG3845 248 KPPSTPGEVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGR 325 (501)
T ss_pred cCCCCCCCeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEecccc
Confidence 001112233589999998643 2 34689999999999999999999999999999999999999999999999997 66
Q ss_pred CCHHHHh-cccEEEccccc----cCcccHHHHhccCCCC---------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCC
Q 000856 1079 LNLKSLR-LKIGLVQQEPA----LFAASIFDNIAYGKEG---------ATEAEVVEAARAANVHGFVSALPNAYKTPVGE 1144 (1252)
Q Consensus 1079 ~~~~~lR-~~i~~VpQd~~----lf~gTIreNl~~~~~~---------~~deei~~al~~~~l~~~i~~lp~gldt~vge 1144 (1252)
.++...| ..++|||.|.+ ....|+.||+.++... ..-.++.+.++.. +.+| +=.+.+.++++
T Consensus 326 ~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~l-i~~f-dVr~~~~~~~a-- 401 (501)
T COG3845 326 LSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAREL-IEEF-DVRAPSPDAPA-- 401 (501)
T ss_pred CCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHH-HHHc-CccCCCCCcch--
Confidence 6777654 56999999985 6788999999765321 1223333222211 1111 11134555555
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh-hccCEEEEEeCC
Q 000856 1145 RGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTI-RGVDCIGVVQDG 1222 (1252)
Q Consensus 1145 ~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti-~~~DrI~vl~~G 1222 (1252)
.+||||+.||+-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|++|+-+++.+ .-||||.||.+|
T Consensus 402 --~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~G 479 (501)
T COG3845 402 --RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEG 479 (501)
T ss_pred --hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCC
Confidence 4699999999999999999999999999999999999999999998876 689999999999988 458999999999
Q ss_pred EEEEecChhh
Q 000856 1223 RIVEQGSHSE 1232 (1252)
Q Consensus 1223 ~Ive~G~~~e 1232 (1252)
+|+...++++
T Consensus 480 ri~~~~~~~~ 489 (501)
T COG3845 480 RIVGIVPPEE 489 (501)
T ss_pred ceeccccccc
Confidence 9998877765
No 101
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.5e-60 Score=595.66 Aligned_cols=530 Identities=14% Similarity=0.133 Sum_probs=435.1
Q ss_pred HHHHHHHhhCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHHHHHH
Q 000856 672 YFLRLLKLNAPEWP-----YSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYL 746 (1252)
Q Consensus 672 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1252)
.+++++++..|.+. .+++.+++.++..++....+++.+.+++.....+..........+.++++++.++..+..+
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777765 4556666667777778888888888888765433221111122344444555555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 747 IQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAF 826 (1252)
Q Consensus 747 ~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 826 (1252)
+..++......++..++|++.+++....++.|||. +.|++.+|+++|++.+.+.+...+..++..++.++++++.++
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~ 234 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLL 234 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777778888888899999999888889999974 679999999999999999999999999999999998888777
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHH
Q 000856 827 I-VEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQ 905 (1252)
Q Consensus 827 ~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~ 905 (1252)
. .+|.+++++++.+|+.+++..+..+...+..++.++..+...+.+.|.++|+++||+|+.++.+.+++.+..++..+.
T Consensus 235 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~ 314 (659)
T TIGR00954 235 TALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEH 314 (659)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-c----CCCCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHH
Q 000856 906 TLRRSLTAGILFGISQFALHA--SEALILWYGVHLVG-K----GVSTFSKVIKV-FVV---LVVTANSVAETVSLAPEII 974 (1252)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv~-~----g~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~ 974 (1252)
..+..+.......+..++... ...+.++.|...+. . |.++.|.+++. ..+ ......|+..+.....++.
T Consensus 315 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~ 394 (659)
T TIGR00954 315 LNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMT 394 (659)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888888877777543 23333334443332 2 67888877663 333 4455788999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCC------CCCCC---C-------------CCCCCccccEEEEeEEEECCCCCCccceeeee
Q 000856 975 RGGESVGSVFSTLDRSTRID------PDDPD---A-------------EPVETIRGEIELRHVDFAYPSRPDVVVFKDFN 1032 (1252)
Q Consensus 975 ~~~~s~~ri~~~~~~~~~~~------~~~~~---~-------------~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~is 1032 (1252)
+...+.+|+.++++.+++.. +..++ . .......+.|+++||+|+|+++ .++|+|+|
T Consensus 395 ~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~is 472 (659)
T TIGR00954 395 RLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecce
Confidence 99999999999987533211 00000 0 0011133569999999999632 36999999
Q ss_pred EEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCC--
Q 000856 1033 LRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGK-- 1110 (1252)
Q Consensus 1033 l~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~-- 1110 (1252)
|+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++||+.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999874 67899999999999999999999863
Q ss_pred -----CCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHH
Q 000856 1111 -----EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESEC 1185 (1252)
Q Consensus 1111 -----~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~ 1185 (1252)
++.++++++++++.+++.++++. |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 34678899999999999999987 999999986 46799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeC
Q 000856 1186 VLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQD 1221 (1252)
Q Consensus 1186 ~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1221 (1252)
.+++.+++. ++|+|+||||++++..||+|++|+.
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999874 8999999999999999999999973
No 102
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.1e-62 Score=579.39 Aligned_cols=485 Identities=27% Similarity=0.417 Sum_probs=348.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ +++|+|+||++.+|+++||||+||||||||+|+|+|...|++|+|...+. -++
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 4889999999964 45999999999999999999999999999999999999999999998762 269
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCCC--HHHHHHHH------------------H-------HhcHHHHHhhCCCCccc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEAT--MAEVEAAA------------------S-------AANAHSFITLLPNGYST 495 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~~--~~~~~~~~------------------~-------~~~~~~~~~~~~~g~~~ 495 (1252)
+|++|++.+.+. ||.+.+..+..... ..+.+.+. . .+.+...+..+ |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999866 99999987743210 01111110 0 01222333333 5555
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEE
Q 000856 496 QVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVI 574 (1252)
Q Consensus 496 ~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l 574 (1252)
. .....+||||||.||+|||||+.+||+|||||||++||.++..++.+.|.+.. | |+|+||||.+++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~-g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP-G-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC-C-cEEEEeCCHHHHHHHhhheEEe
Confidence 4 66778999999999999999999999999999999999999999999998764 5 99999999999988 7999999
Q ss_pred eCCEEE-EecChHHHHhcccchHHHHHHHHhhcccCCCCCCcccccccccccccccccccccccccccCCccccCCCCcc
Q 000856 575 QQGQVV-ETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGR 653 (1252)
Q Consensus 575 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (1252)
+.|++. +.|+++..++.. ..........
T Consensus 224 d~g~l~~y~Gny~~~~~~r----------~~~~~~~~~~----------------------------------------- 252 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQK----------AERLRQEAAA----------------------------------------- 252 (530)
T ss_pred cCCceeEecCCHHHHHHHH----------HHHHHHHHHH-----------------------------------------
Confidence 999875 455554443321 1000000000
Q ss_pred cccccccccccCCCCCchHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHH
Q 000856 654 IEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFI 733 (1252)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1252)
+.+
T Consensus 253 -------------------~~~---------------------------------------------------------- 255 (530)
T COG0488 253 -------------------YEK---------------------------------------------------------- 255 (530)
T ss_pred -------------------HHH----------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHHH
Q 000856 734 YIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQ 813 (1252)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~~ 813 (1252)
.++..++.. ..+.|+
T Consensus 256 ------------------------------~~~~~~~~~---------------~~i~r~-------------------- 270 (530)
T COG0488 256 ------------------------------QQKELAKEQ---------------EWIRRG-------------------- 270 (530)
T ss_pred ------------------------------HHHHHHHHH---------------HHHHHH--------------------
Confidence 000000000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHHH
Q 000856 814 NMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILS 893 (1252)
Q Consensus 814 ~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~ 893 (1252)
T Consensus 271 -------------------------------------------------------------------------------- 270 (530)
T COG0488 271 -------------------------------------------------------------------------------- 270 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 894 LFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEI 973 (1252)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1252)
........++
T Consensus 271 --~~~~~~~k~a-------------------------------------------------------------------- 280 (530)
T COG0488 271 --KAAASKAKKA-------------------------------------------------------------------- 280 (530)
T ss_pred --HhccchHHHH--------------------------------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCC---CCCC--CCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCC
Q 000856 974 IRGGESVGSVFSTLDRSTRIDPDDPD---AEPV--ETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASG 1048 (1252)
Q Consensus 974 ~~~~~s~~ri~~~~~~~~~~~~~~~~---~~~~--~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SG 1048 (1252)
..-....+++.+......+.....+. .++. ...+.-++++|++++|++. +++++++||.|.+|++||||||||
T Consensus 281 ~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG 358 (530)
T COG0488 281 KSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNG 358 (530)
T ss_pred HHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCC
Confidence 00000011111000000000000000 0011 1223468999999999643 469999999999999999999999
Q ss_pred CChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEcccc-ccC-cccHHHHhccCCCCCCHHHHHHHHHHcC
Q 000856 1049 SGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEP-ALF-AASIFDNIAYGKEGATEAEVVEAARAAN 1126 (1252)
Q Consensus 1049 SGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~-~lf-~gTIreNl~~~~~~~~deei~~al~~~~ 1126 (1252)
+|||||+++|.|-..|.+|+|.++- .-++||.+|+. .++ +.|+-|++.-..++..+.++...|.+.+
T Consensus 359 ~GKSTLlk~l~g~~~~~~G~v~~g~-----------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~ 427 (530)
T COG0488 359 AGKSTLLKLLAGELGPLSGTVKVGE-----------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFG 427 (530)
T ss_pred CCHHHHHHHHhhhcccCCceEEeCC-----------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcC
Confidence 9999999999999999999999863 13599999998 344 4489999987666666889999999988
Q ss_pred chhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecC
Q 000856 1127 VHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHR 1206 (1252)
Q Consensus 1127 l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHr 1206 (1252)
+..- -..++|+ .||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.+. .-|||+|||+
T Consensus 428 F~~~------~~~~~v~----~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHD 495 (530)
T COG0488 428 FTGE------DQEKPVG----VLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHD 495 (530)
T ss_pred CChH------HHhCchh----hcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCC
Confidence 8642 2345554 59999999999999999999999999999999999999999999886 4499999999
Q ss_pred chhhhc-cCEEEEEeCCEEEEe-cChhhhhcC
Q 000856 1207 LSTIRG-VDCIGVVQDGRIVEQ-GSHSELVSR 1236 (1252)
Q Consensus 1207 l~ti~~-~DrI~vl~~G~Ive~-G~~~eLl~~ 1236 (1252)
.+.+.. |++|+++++ ++.++ |.+++..+.
T Consensus 496 r~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 496 RYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 999976 699999999 88877 788777654
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9.3e-53 Score=468.31 Aligned_cols=237 Identities=23% Similarity=0.424 Sum_probs=223.3
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
|+|+|+||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++ ++|+|++||+++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999632 3469999999999999999999999999999999999998 79999999999999999999999
Q ss_pred cEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1088 IGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
++||||+|.+|++|+++|+++.. ..++++++++++.+++.+++..+|+++++.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998543 36789999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHH
Q 000856 1168 AILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQL 1247 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~ 1247 (1252)
+||||||||++||+.++..+++.|++.+.++|+|+||||++++..||||++|++|++++.|+|++|+++ .+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999999999999999999999999988889999999999999999999999999999999999999996 6888888875
Q ss_pred h
Q 000856 1248 Q 1248 (1252)
Q Consensus 1248 q 1248 (1252)
.
T Consensus 237 ~ 237 (275)
T cd03289 237 S 237 (275)
T ss_pred c
Confidence 4
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-52 Score=417.36 Aligned_cols=219 Identities=33% Similarity=0.545 Sum_probs=190.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC-CCHHHHhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT-LQLRWLRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~-~~~~~~~~~ 442 (1252)
.|+++|++++|++ ..+|+|||++|++||+++|+||||||||||+++|+|+..|++|+|.+||.++.. .+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 3899999999974 359999999999999999999999999999999999999999999999987743 367889999
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE---ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
+|+|||+..||+. ||.||+.++.-. ...++..+ .+.+.++.. |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~-----~A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE-----KALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHH-----HHHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999987 999999987431 11222211 112344444 677677777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
+.+|+++|+|||||||||+...++.+.++++. .|.|.|+|||.+.+++. ||||+.|++|+|+++|+++++..+.
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 99999999999999999999999999999986 58999999999999988 6999999999999999999987653
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-50 Score=405.45 Aligned_cols=218 Identities=31% Similarity=0.564 Sum_probs=196.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC-CCCHHHHhcc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR-RLNLKSLRLK 1087 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~-~~~~~~lR~~ 1087 (1252)
-|+++||+.+|. +..||+|||++|++||+++|+||||||||||+++|.+|.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999996 346999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred cEEEccccccCc-ccHHHHhccCCC---CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGKE---GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~~---~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
+|+|+|+..||+ -|+.||+.++.- ..+ ++...+.|+++|+.|..+..| ..|||||+||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999995 699999987621 122 344577889999999888877 4699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
||||.-+|+++++|||||||||+.-.++.+.++++. .|.|.|+|||.+..+++ +|||+.||+|+|+|.|+|+++..+|
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999987 58899999999999987 5999999999999999999999987
Q ss_pred Cch
Q 000856 1238 DGA 1240 (1252)
Q Consensus 1238 ~g~ 1240 (1252)
...
T Consensus 228 ~~~ 230 (240)
T COG1126 228 KSE 230 (240)
T ss_pred CCH
Confidence 654
No 106
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=437.31 Aligned_cols=194 Identities=30% Similarity=0.424 Sum_probs=164.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|.|+||+|.|++.+ .+++++||-|..++++|+|||||+|||||+|++.|...|+.|.|.-.- .-++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~-----------H~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS-----------HNKL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc-----------cccc
Confidence 599999999997543 689999999999999999999999999999999999999999886542 2234
Q ss_pred EEEcccc---ccCcccHHHHhccCCCC-CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1089 GLVQQEP---ALFAASIFDNIAYGKEG-ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1089 ~~VpQd~---~lf~gTIreNl~~~~~~-~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
++..|+- .-++-|.-|++.+-.++ ...+++...+.+.|+..-.+.. ++ .+||+|||.|++.||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHh
Confidence 4444543 35677888898766553 6778889999999997544433 34 369999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~ 1227 (1252)
+.|.||+|||||+|||.++-..+.++|+++ ..+||+|||+...|.. +++|++.+||.+...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 999999999999999999999999999986 4589999999999976 599999999998653
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-49 Score=419.64 Aligned_cols=220 Identities=40% Similarity=0.639 Sum_probs=194.8
Q ss_pred EEEEeEEEECCCC--CCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC---HHHH
Q 000856 1010 IELRHVDFAYPSR--PDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN---LKSL 1084 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~--~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~---~~~l 1084 (1252)
|+++|||+.|+.. ....+|+||||+|++||+.||+|+||||||||++++.++-+|++|+|.+||+|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999752 1246999999999999999999999999999999999999999999999999887766 5667
Q ss_pred hcccEEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1085 RLKIGLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1085 R~~i~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
|++||+|+|++.|++ .|+.+|++|+.. ..+ ++.+.+.|+.+|+.|+...-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 899999999999997 899999998632 233 345667778888887766655 58999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
+|||||..+|+||+.|||||||||+|-+.|.+.|++.- -|-|+++|||-++.+++ |||+.||++|+|+|.|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998864 38899999999999976 8999999999999999999999
Q ss_pred cCCCch
Q 000856 1235 SRPDGA 1240 (1252)
Q Consensus 1235 ~~~~g~ 1240 (1252)
.+|...
T Consensus 231 ~~Pk~~ 236 (339)
T COG1135 231 ANPKHA 236 (339)
T ss_pred cCcchH
Confidence 887543
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-49 Score=420.16 Aligned_cols=223 Identities=38% Similarity=0.581 Sum_probs=193.1
Q ss_pred EEEEeEEEECCCC--CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HH
Q 000856 365 IEFKNVTFSYPSR--PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WL 439 (1252)
Q Consensus 365 i~~~~v~~~y~~~--~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 439 (1252)
|+++||++.|+.. ....+|+|+||+|++||+.||+|.||+|||||++++.++..|++|+|.+||+|+..++.. ..
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999853 235699999999999999999999999999999999999999999999999998877654 56
Q ss_pred hhhceEEccCCCCch-hcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 440 RDQIGLVNQEPALFA-TTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 440 ~~~i~~v~Q~~~l~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
|++|||+||++.|++ .||.+|++|+.+-+...+-+...+..++.+.+ |+....+..+.+|||||||||+|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV-----gL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV-----GLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc-----CChhhhccCchhcCcchhhHHHHHHHH
Confidence 778999999999997 59999999986543322222222333333333 777777888899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
+.+|+|||+|||||||||++.+.+.+.|+++. .|-|+++|||.++.++. ||||.||++|+++|+|+..++..+.
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 99999999999999999999999999999885 38999999999999988 8999999999999999999987764
No 109
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-49 Score=402.27 Aligned_cols=218 Identities=34% Similarity=0.544 Sum_probs=191.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+|+|||++|.+ ..+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++..++|++||
T Consensus 2 I~~~nvsk~y~~---~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYGN---KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcCC---ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 789999999973 45899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCchh-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccc--cccCCCCCCChHHHHHHHHHHHhc
Q 000856 445 LVNQEPALFAT-TILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYST--QVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
||-|...||+. ||.|||.+-..-. +.+++.+ + +.+.+..+ |++. ...+.+.+|||||+|||.+||||+
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~--r---~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKK--R---ADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH--H---HHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHh
Confidence 99999999976 9999999754322 2222222 1 22333333 5543 466778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
.+|+|+++|||++||||.+++.+++.+.++.+ ++|+|+||||+++... +|||.+|++|+++..++|++++.+.
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999999999988854 8999999999999865 8999999999999999999998764
No 110
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-48 Score=443.24 Aligned_cols=228 Identities=32% Similarity=0.538 Sum_probs=201.6
Q ss_pred CCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccC-
Q 000856 1004 ETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIR- 1077 (1252)
Q Consensus 1004 ~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~- 1077 (1252)
|+..+.|+|+|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+|+.
T Consensus 75 ~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 5666789999999999632 3469999999999999999999999999999999999997 57999999999997
Q ss_pred -CCCHHHHhcccEEEccccccCcccHHHHhccCCC--CCCHHHH-----HHHHHHcCchhhHhhCCCcCCCccCCCCCCC
Q 000856 1078 -RLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GATEAEV-----VEAARAANVHGFVSALPNAYKTPVGERGVQL 1149 (1252)
Q Consensus 1078 -~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~~deei-----~~al~~~~l~~~i~~lp~gldt~vge~G~~L 1149 (1252)
..++..+|++++||||+|.+|++|+++||.++.. ..++++. .++++.+++ +.++++.++++|.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccC
Confidence 4566789999999999999999999999997532 2444443 445566665 345667889999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1150 SGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1150 SgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
|||||||+|||||++++|+|||||||||+||+++...+++.|++.++++|+|+|||+++++.. ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999999888999999999999987 9999999999999999
Q ss_pred ChhhhhcCCCc
Q 000856 1229 SHSELVSRPDG 1239 (1252)
Q Consensus 1229 ~~~eLl~~~~g 1239 (1252)
+|++++..+..
T Consensus 307 ~~~~l~~~~~~ 317 (329)
T PRK14257 307 ETKTIFIHPKN 317 (329)
T ss_pred CHHHHhcCCCc
Confidence 99999876543
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-49 Score=392.19 Aligned_cols=220 Identities=35% Similarity=0.567 Sum_probs=199.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC-----ceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTA-----GKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~-----G~I~idG~di~~--~~~ 1081 (1252)
.++++|+++.|. +..+|+|||++|++++++|++|||||||||++++|.|+.+..+ |+|.+||.||.+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 3469999999999999999999999999999999999999886 999999999975 678
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
-.+|+++|+|+|.|.-|+.||+||+.||.. ..-||-+.++|+.+.|||.+... +.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDr-------L~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDR-------LHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHH-------hhCCccCCChhHHH
Confidence 899999999999999999999999999832 12245678999999999988642 34566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
||||||||.-+|+||+||||||+|||.+-..|.+.|.++.++-||++|||.+.-..+ +|+...|-+|+++|+|+-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999997755 6999999999999999999999
Q ss_pred cCCC
Q 000856 1235 SRPD 1238 (1252)
Q Consensus 1235 ~~~~ 1238 (1252)
.+|.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 112
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-47 Score=393.08 Aligned_cols=221 Identities=35% Similarity=0.574 Sum_probs=198.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccccCc-ccHHHHhccCC------CCCCHHHHHHHHHHcCch--hhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGK------EGATEAEVVEAARAANVH--GFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~------~~~~deei~~al~~~~l~--~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
||-|..-||+ .||.|||+.-. ....++.+.+.++.+++. +|....| ..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999999995 69999998531 122345667788888886 3666666 46999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
|||..+|+|+++|||.+|||+-+...+|+.+.+..+ ++|+|+|||++++. +-+|||.+|++|+|+.+|+|++++++|
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999988653 89999999999876 668999999999999999999999998
Q ss_pred CchhHHH
Q 000856 1238 DGAYSRL 1244 (1252)
Q Consensus 1238 ~g~y~~l 1244 (1252)
...|-+-
T Consensus 228 an~FV~~ 234 (309)
T COG1125 228 ANDFVED 234 (309)
T ss_pred cHHHHHH
Confidence 7776543
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-48 Score=384.63 Aligned_cols=219 Identities=32% Similarity=0.485 Sum_probs=195.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCC-----cEEEECCccccC--CC
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNA-----GHVLLDNVDIKT--LQ 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~-----G~i~~~g~~~~~--~~ 435 (1252)
..++++|+++.|++ ..+|+|||++|++++++|++||||||||||++++.+..+..+ |+|.++|+|+.+ .+
T Consensus 6 ~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 35899999999974 459999999999999999999999999999999999998765 999999999966 57
Q ss_pred HHHHhhhceEEccCCCCchhcHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 436 LRWLRDQIGLVNQEPALFATTILENILYGKPEA------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
...+|++||+|+|.|.-|+.||+||+.||.... -++.++.+++.+.+.+.+.. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 889999999999999999999999999984321 13446777888887776543 34567888999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||+||||||+-+|+|||||||||||||.+..+|.+.|.+++++-|||+|||.+....+ .|+..++..|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999999999999999999887 599999999999999999988
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
..+
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 764
No 114
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2e-46 Score=417.55 Aligned_cols=235 Identities=24% Similarity=0.395 Sum_probs=216.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++. +.++|+|+||+|++||+++|+||||||||||+++|+|+++ ++|+|++||.++..++...+|+.|
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 58999999999642 3458999999999999999999999999999999999997 799999999999988888999999
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPK 523 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ 523 (1252)
+||||+|.+|++|+++|+....+ .+.++++++++.+++.+++..+|.|+++.++++|.+||||||||++||||++++|+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999963322 45678888999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHHHH
Q 000856 524 ILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRF 601 (1252)
Q Consensus 524 illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 601 (1252)
|+||||||++||+.+++.+++.|++..+++|+|+||||++++..||||++|++|++++.|+++++.+..+.|+.+...
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 999999999999999999999999887789999999999999889999999999999999999999977766666643
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.4e-46 Score=411.44 Aligned_cols=235 Identities=49% Similarity=0.789 Sum_probs=217.5
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999632 246999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|+||++.+|+.|++||+.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999886554566777888888999999999999999998888899999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHH
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~ 1246 (1252)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|++++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 9999999999999999999999998778999999999999988999999999999999999999987 788888765
No 116
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7e-46 Score=413.65 Aligned_cols=241 Identities=34% Similarity=0.520 Sum_probs=222.8
Q ss_pred ccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHh
Q 000856 1006 IRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1006 ~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1085 (1252)
..+.|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 45789999999999642 24699999999999999999999999999999999999999999999999999998888999
Q ss_pred cccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHcc
Q 000856 1086 LKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLK 1165 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~ 1165 (1252)
++++|++|+|.+|++|+++|+.+.. ...+++++++++..++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998643 235667888999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHH
Q 000856 1166 NPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1166 ~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~ 1245 (1252)
+|++|||||||++||+.++..+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++++..++.|+.++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999987778999999999999988999999999999999999999987678888887
Q ss_pred HHh
Q 000856 1246 QLQ 1248 (1252)
Q Consensus 1246 ~~q 1248 (1252)
..+
T Consensus 254 ~~~ 256 (257)
T cd03288 254 RTD 256 (257)
T ss_pred hcc
Confidence 643
No 117
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-43 Score=375.34 Aligned_cols=470 Identities=19% Similarity=0.220 Sum_probs=343.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000856 91 VYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYL 170 (1252)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~s~l~~d~~~i~~~~~~~~~~~~~~~ 170 (1252)
..+.++..+++.+........+++.+.++|.++.++++.-|+..+++ .++++++.++++|+..|. +-...++.+.++.
T Consensus 55 ~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier-~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~ 132 (546)
T COG4615 55 LGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER-LGSARLLAGLTSDVRNIS-FAFSRLPELVQAI 132 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-hcccchhhhhccccccee-ehHhhhHHHHHHH
Confidence 33334445566666777788899999999999999999999999986 489999999999999999 4455678899999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcchHH--HHH
Q 000856 171 STFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESK--ALN 248 (1252)
Q Consensus 171 ~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~--~~~ 248 (1252)
..++++.+...++|+++.+++++.+.+.+....+...+.-+.....++..+++.+..+..+.|.|.++...--.+ ..+
T Consensus 133 il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~ 212 (546)
T COG4615 133 ILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNN 212 (546)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhh
Confidence 999999999999999998888877777777777777777777778888888999999999999999987533221 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 249 SYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAF 328 (1252)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (1252)
.|....++.++...+............+.+......+++|.... -+.-+...+.+..+..++...|+.+....++.+
T Consensus 213 ~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~---~~w~st~~a~tivlvlLflr~pL~s~vgilP~l 289 (546)
T COG4615 213 LYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALS---LGWASTNVAATIVLVLLFLRTPLLSAVGILPTL 289 (546)
T ss_pred hcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---hccchhhHHHHHHHHHHHHhhHHHHHHhhhhHH
Confidence 22222222222111111110000111111111122222332221 123333344444455555566888888888999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHH
Q 000856 329 SKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKST 408 (1252)
Q Consensus 329 ~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKST 408 (1252)
.++.+|.++|.++-..++..+ .+ ...+.++ -..|+++||.|+|+.. ..-+..||++|++||++-|+|.|||||||
T Consensus 290 ~~AqvA~~kiakle~~~~~a~-~~-~~q~~p~-~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST 364 (546)
T COG4615 290 LTAQVAFNKIAKLELAPYKAD-FP-RPQAFPD-WKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKST 364 (546)
T ss_pred HHHHHHHHHHHHhhcCCcccc-CC-CCCcCCc-ccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHH
Confidence 999999999999865433211 11 1111111 2359999999999743 24568899999999999999999999999
Q ss_pred HHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchhcHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHh
Q 000856 409 VVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPE-ATMAEVEAAASAANAHSFIT 487 (1252)
Q Consensus 409 ll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~-~~~~~~~~~~~~~~~~~~~~ 487 (1252)
+++++.|+|.|++|+|++||+++..-+++++|+-++-|+-|-|||+.++ |.+. ++.+.+...+....+.....
T Consensus 365 ~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~kts 438 (546)
T COG4615 365 LAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHKTS 438 (546)
T ss_pred HHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999999999999999999999999998754 3333 45555555554443333222
Q ss_pred hCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHh-c-CCCeEEEEccCccch
Q 000856 488 LLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRL-M-VGRTTVVVAHRLSTI 565 (1252)
Q Consensus 488 ~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~-~-~~~tvi~itH~~~~~ 565 (1252)
. .+|-- ....||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+..+ + .||||+.||||-.+.
T Consensus 439 l-~d~~f-----s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF 512 (546)
T COG4615 439 L-NDGRF-----SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYF 512 (546)
T ss_pred c-cCCcc-----cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhh
Confidence 1 11111 12369999999999999999999999999999999999988888776544 3 499999999999999
Q ss_pred hccCEEEEEeCCEEEEe
Q 000856 566 RNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 566 ~~~d~i~~l~~G~i~~~ 582 (1252)
..|||++.+++|+++|.
T Consensus 513 ~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 513 IHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhHHHHHHHhcCceeec
Confidence 99999999999999875
No 118
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.9e-45 Score=408.02 Aligned_cols=195 Identities=29% Similarity=0.403 Sum_probs=163.7
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
..+++.+|+|.|+..+. +.+.++++.+..-+++++||++|.||||+++++.+-..|..|-+.+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 36999999999964433 689999999999999999999999999999999999999999988875 788
Q ss_pred cEEEccccccC-cccHH--HHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1088 IGLVQQEPALF-AASIF--DNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1088 i~~VpQd~~lf-~gTIr--eNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
|+|-.|.-.=| +-++- +-+.-..|+.+++|+++.|...|+..-+...+ + ..||||||-|+++|-...
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s------i----~~LSGGQKsrvafA~~~~ 498 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS------I----ASLSGGQKSRVAFAACTW 498 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc------c----cccCCcchhHHHHHHHhc
Confidence 99999976533 22111 11111235669999999999999876554322 2 359999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVE 1226 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive 1226 (1252)
.+|.+|||||||.+||.++-..+-++|+... .-||+|||+.+.+.. |+.+++.++|+|..
T Consensus 499 ~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~--GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 499 NNPHLLVLDEPTNHLDRDSLGALAKALKNFN--GGVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred CCCcEEEecCCCccccHHHHHHHHHHHHhcC--CcEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 9999999999999999999999999998763 379999999999965 89999999999976
No 119
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-44 Score=445.20 Aligned_cols=198 Identities=23% Similarity=0.394 Sum_probs=168.4
Q ss_pred CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--CCCceEEECCcccCCCCHHHHhcccEEEcccc-ccCcc
Q 000856 1024 DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD--PTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEP-ALFAA 1100 (1252)
Q Consensus 1024 ~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~--p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~-~lf~g 1100 (1252)
.+..|+|||=-++||..+|++|+||||||||++.|.|-.. ..+|+|+|||.+..+ +..++.+|||.|++ |+=.-
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCccc
Confidence 3469999999999999999999999999999999998754 247899999998765 78999999999977 56677
Q ss_pred cHHHHhccCC-----CCCCHHH----HHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC-CEE
Q 000856 1101 SIFDNIAYGK-----EGATEAE----VVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP-AIL 1170 (1252)
Q Consensus 1101 TIreNl~~~~-----~~~~dee----i~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p-~IL 1170 (1252)
||||-|.+.. .+.+++| +.++.+..++.++-+ ..||..|..||..||.||.||=-|+.|| .||
T Consensus 880 TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~d-------aiVG~~G~GLs~eQRKrLTIgVELvA~P~~il 952 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYAD-------ALVGLPGSGLSTEQRKRLTIGVELVANPSSIL 952 (1391)
T ss_pred chHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhh-------hhccCCCCCCCHHHhceeeEEEEEecCCceeE
Confidence 9999997641 2334333 456666666665543 4589889999999999999999999999 999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchh--hhccCEEEEEe-CCEEEEecChh
Q 000856 1171 LLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLST--IRGVDCIGVVQ-DGRIVEQGSHS 1231 (1252)
Q Consensus 1171 iLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~t--i~~~DrI~vl~-~G~Ive~G~~~ 1231 (1252)
+|||||||||+.+...|.+.++++. .|+||++.=|.++. .+.+|+++.|. .|+.|-+|+..
T Consensus 953 FLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG 1017 (1391)
T KOG0065|consen 953 FLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLG 1017 (1391)
T ss_pred EecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcc
Confidence 9999999999999999999999986 69999999999984 36789999996 58999998864
No 120
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-46 Score=380.79 Aligned_cols=223 Identities=35% Similarity=0.561 Sum_probs=190.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HH
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WL 439 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 439 (1252)
..|++++|+++|++ +.+++|+||+|++||+++|+||||||||||+|+|.|+++|++|+|.++|+|+.+.+.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 46999999999974 4599999999999999999999999999999999999999999999999999888754 57
Q ss_pred hhhceEEccCCCCchh-cHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHhhCCCCcccc-ccCCCCCCChHHHHHHHH
Q 000856 440 RDQIGLVNQEPALFAT-TILENILYGKPEA---TMAEVEAAASAANAHSFITLLPNGYSTQ-VGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 440 ~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~LSgGqkqRv~l 514 (1252)
|+++|+++|.-.||+. ||+||+.|...+. ....+.+.. ...++.. |+... ....+++||||+++|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv-----~~KL~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELV-----LMKLELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHH-----HHHHHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8899999999999977 9999999964322 222222211 1122222 55554 445678999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||++.+|+|+++|||||+|||.+...+.+.|+++++ |.|+++||||++++.. ||||+++.+|+|+.+|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998864 8999999999999987 699999999999999999999887
Q ss_pred ccch
Q 000856 592 AGAY 595 (1252)
Q Consensus 592 ~~~~ 595 (1252)
+..|
T Consensus 237 d~P~ 240 (263)
T COG1127 237 DDPW 240 (263)
T ss_pred CCHH
Confidence 6544
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.2e-46 Score=396.76 Aligned_cols=214 Identities=35% Similarity=0.536 Sum_probs=188.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++|+|++ +++++|+||++++||+++|+||||||||||+|+|+|+++|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999974 4599999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEccCCCC-chhcHHHHHhcCCCCC-------CH---HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHH
Q 000856 444 GLVNQEPAL-FATTILENILYGKPEA-------TM---AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRI 512 (1252)
Q Consensus 444 ~~v~Q~~~l-~~~tv~~ni~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv 512 (1252)
|||||++.. +.-||+|-+.+|+... +. +.+.++++.. |+.....+...+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~-----------~~~~la~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELL-----------GLEHLADRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHh-----------CcHHHhcCcccccChhHHHHH
Confidence 999999754 4559999999985321 11 2344445544 444455666779999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchh-ccCEEEEEeCCEEEEecChHHHH
Q 000856 513 AIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIR-NVDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 513 ~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
.|||||+++|+||+||||||+||...+-++++.++++. +|+|+|++.||++... .||++++|++|+++.+|+++|++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 4899999999999874 59999999999999999999887
Q ss_pred hc
Q 000856 590 AK 591 (1252)
Q Consensus 590 ~~ 591 (1252)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 65
No 122
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-44 Score=399.85 Aligned_cols=233 Identities=58% Similarity=0.924 Sum_probs=214.4
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++. ..++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999643 235999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|+||++.+|..|++||+.++....+.+++.+.++..++.++++.+|.|+++..+.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555566777778888899999999999999999888999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHH
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l 1244 (1252)
+||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 9999999999999999999999998788999999999999988999999999999999999999876 6666654
No 123
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5e-45 Score=389.78 Aligned_cols=214 Identities=34% Similarity=0.563 Sum_probs=192.7
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++|++|+|+ ++++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999996 34699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccc-ccCcccHHHHhccCCCC----------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1089 GLVQQEP-ALFAASIFDNIAYGKEG----------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1089 ~~VpQd~-~lf~gTIreNl~~~~~~----------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
+||||++ .-|.-|++|=+.+|+.. .+++.+.+|++.+++.++..+. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 9999996 56778999999887421 1233578899999999886542 3 35999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhh
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
.|||||.++|+||+||||||+||...+.++++.++++. +++|+|+|.|+++.. +.||++++|++|+|+..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 379999999999865 678999999999999999999988
Q ss_pred cC
Q 000856 1235 SR 1236 (1252)
Q Consensus 1235 ~~ 1236 (1252)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 53
No 124
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-44 Score=398.70 Aligned_cols=235 Identities=53% Similarity=0.839 Sum_probs=217.4
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|+||++.+|++|+++|+.++....+++++.++++.+++.+++..+|.|+++.+......||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555667778888899999999999999999999988999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHHH
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQL 1247 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~~ 1247 (1252)
|||||||++||+.+...+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++..+ .+.|+.++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 9999999999999999999999987668899999999999988999999999999999999999875 6777777654
No 125
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.6e-44 Score=399.18 Aligned_cols=236 Identities=62% Similarity=1.002 Sum_probs=214.5
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++..+.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999996432346999999999999999999999999999999999999999999999999998888878888999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|+||++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.......+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999986555566777788888899999999999999999888899999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHHHH
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~~ 1246 (1252)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.++.++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 236 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLVK 236 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHhh
Confidence 9999999999999999999999987778999999999999988999999999999999999999875 555655543
No 126
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.7e-44 Score=398.72 Aligned_cols=234 Identities=48% Similarity=0.800 Sum_probs=211.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 245899999999999999999999999999999999999999999999999988777777888899
Q ss_pred EEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000856 445 LVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKI 524 (1252)
Q Consensus 445 ~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~i 524 (1252)
|++|++++++.|++||+.++.+.....++...++..++.+.+..+|.|+++..++.+.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999988999999986543445556666677788888999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHHH
Q 000856 525 LLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLI 599 (1252)
Q Consensus 525 lllDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~ 599 (1252)
+||||||++||+.+++.+.+.|+++.+|+|+|++||+++.+..||++++|++|++++.|+++++..+.+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 999999999999999999999999877899999999999998799999999999999999999988877776644
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-45 Score=406.73 Aligned_cols=213 Identities=33% Similarity=0.541 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++.. +++|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|.++++.++.. +.|
T Consensus 3 ~i~l~~v~K~yg~~~---~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSFE---VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCce---eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 489999999997431 899999999999999999999999999999999999999999999999999988875 689
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCCC------HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEAT------MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
|+|||+..||+. ||+|||.|+..... +.++.++++.. +++..+.+++.+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L-----------~l~~lL~r~P~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLL-----------GLEHLLNRKPLQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHc-----------CChhHHhcCcccCChhhHHHHHHHH
Confidence 999999999987 99999999865322 23344444443 5555666677799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
||+++|+++|||||+|+||++.+..+...|+++.+ +.|+|+||||..++.. +|||.||++|+|.+.|++.|+.++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999999999999988753 7999999999999876 8999999999999999999998764
No 128
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4e-45 Score=355.21 Aligned_cols=210 Identities=35% Similarity=0.567 Sum_probs=187.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
+.+++|.|+|+..+ =.++++|++||++||+||||||||||+++|+||..|.+|+|.+||+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999997533 368999999999999999999999999999999999999999999999876665 35699
Q ss_pred EEccCCCCchh-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 445 LVNQEPALFAT-TILENILYGKPE------ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
+++||..||.. ||.+|+.+|... ...++++.++...++..+.+++|. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999976 999999998531 234667888888888888888876 899999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
|+++-+|++||||+|+|||.-+.++...+.++. ++.|++||||+++.+.. +|+++++++|+|.++|+.+++....
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 999999999999999999999999999998885 47899999999999977 7999999999999999999887654
No 129
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.9e-44 Score=394.17 Aligned_cols=221 Identities=35% Similarity=0.593 Sum_probs=206.7
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
|.++++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999632 2469999999999999999999999999999999999999999999999999998888889999
Q ss_pred cEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1088 IGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
++|+||++.+|++|++||+.+.. ..+.+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998754 35678889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000856 1168 AILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~ 1230 (1252)
++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999988778899999999999988999999999999998863
No 130
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-45 Score=374.07 Aligned_cols=217 Identities=34% Similarity=0.552 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC---HHHHh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ---LRWLR 440 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~ 440 (1252)
.|+++|+++.||+ ++.+|+||||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|.++...+ ...+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 456999999999999999999999999999999999999999999999999988776 45677
Q ss_pred hhceEEccCCCCchh-cHHHHHhcCCCCC-----------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHH
Q 000856 441 DQIGLVNQEPALFAT-TILENILYGKPEA-----------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQ 508 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGq 508 (1252)
++|||++|++.|.+. ||.+|++.|.... +.++.. .+.+.++.+ |+......+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~------~Al~aLerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKA------QALDALERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHH------HHHHHHHHc--CcHHHHHHHhccCCcch
Confidence 899999999999876 9999999875422 122222 222334444 66666667788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecCh
Q 000856 509 KQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 509 kqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 585 (1252)
+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|+++. .|.|+|+.-|+++.+++ ||||+-|++|+|+.+|+.
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999999885 48999999999999966 899999999999999999
Q ss_pred HHHHh
Q 000856 586 EELIA 590 (1252)
Q Consensus 586 ~~l~~ 590 (1252)
+|+-+
T Consensus 233 ~el~~ 237 (258)
T COG3638 233 SELTD 237 (258)
T ss_pred hhhhH
Confidence 88643
No 131
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9.8e-45 Score=414.61 Aligned_cols=225 Identities=34% Similarity=0.599 Sum_probs=194.3
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---Hh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---LR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1085 (1252)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996321 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1086 LKIGLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
++|+||||++.+|. .|++||+.++.. ..+ ++.+.++++.+++.++....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999985 799999986421 222 345677888888877655443 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||+.+|++||||||||+||+.+...+++.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999753 7899999999999965 89999999999999999999987
Q ss_pred CCCchh-HHHH
Q 000856 1236 RPDGAY-SRLL 1245 (1252)
Q Consensus 1236 ~~~g~y-~~l~ 1245 (1252)
.+...+ ++++
T Consensus 231 ~p~~~~~~~~~ 241 (343)
T TIGR02314 231 HPKTPLAQKFI 241 (343)
T ss_pred CCCcHHHHHHH
Confidence 655444 4444
No 132
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7e-45 Score=381.00 Aligned_cols=209 Identities=36% Similarity=0.536 Sum_probs=173.1
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HH-
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WL- 439 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~- 439 (1252)
++++|+++.|.... ...+|+++||+|++||+++|+|||||||||||++|.|+..|++|+|.++|+|+...+.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 25699999999999999999999999999999999999999999999999999887643 34
Q ss_pred hhhceEEccCCCCchh-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCcccccc-CCCCCCChHHHHHHHHH
Q 000856 440 RDQIGLVNQEPALFAT-TILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVG-ERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 440 ~~~i~~v~Q~~~l~~~-tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~LSgGqkqRv~lA 515 (1252)
|++||||+|+..|++. |++||+.++.. .....+..+ ...+.++.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~-----~~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKR-----AAEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHH-----HHHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 4579999999999876 99999986321 111111111 111222332 5554444 66889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCCEEE
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQGQVV 580 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 580 (1252)
|||+.+|++++.||||++||.++.+.+++.++++. .|+|+|+||||......|||++.|+||++.
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999984 389999999999999999999999999954
No 133
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-45 Score=380.21 Aligned_cols=202 Identities=36% Similarity=0.520 Sum_probs=170.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.+++++++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+++.- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4789999999975 5699999999999999999999999999999999999999999999999887432 3479
Q ss_pred eEEccCCCCch-hcHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFA-TTILENILYGKPEAT--MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~-~tv~~ni~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+||+|++.||+ -||+||+.++..... .++-.+ .+.+.++.. |+...-+..+.+|||||||||||||||+.
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~-----~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARE-----RAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALAT 147 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHH-----HHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhc
Confidence 99999999996 499999999875432 111111 222334433 66656666777999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeC--CEEE
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQ--GQVV 580 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~--G~i~ 580 (1252)
+|++|+||||++|||+.|+..+++.+.++. .++|+++|||++++.-. +|||++|.+ |+|.
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999998885 37999999999999866 899999998 4553
No 134
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.8e-45 Score=359.10 Aligned_cols=206 Identities=32% Similarity=0.490 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH---HHHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL---RWLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 441 (1252)
|+|+||+++|++. .++|+|+||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|.|+..+.. ..+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999864 569999999999999999999999999999999999999999999999999987654 46899
Q ss_pred hceEEccCCCCchh-cHHHHHhcCCCCCC------HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 442 QIGLVNQEPALFAT-TILENILYGKPEAT------MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~-tv~~ni~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
+||+|+||..|... ||+||++|...-.. .+++..+++.+++.+....+ +.+|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~l-----------P~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARAL-----------PSQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcC-----------ccccCchHHHHHHH
Confidence 99999999988765 99999999754222 23455555555555544444 45999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhcc-CEEEEEeCCEEEEec
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRNV-DTVAVIQQGQVVETG 583 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~~-d~i~~l~~G~i~~~g 583 (1252)
|||+..+|++||-||||.+|||.....+++.+.++. .|.||++.||+.+.+..+ -|++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999999999985 599999999999999886 799999999998654
No 135
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.7e-45 Score=358.41 Aligned_cols=208 Identities=34% Similarity=0.543 Sum_probs=188.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~ 1086 (1252)
|+|+||+.+|+.. .++|+||||+|++||.+-++||||||||||+|+|++...|++|+|.++|.|+.++.-. -||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999854 4699999999999999999999999999999999999999999999999999887754 4899
Q ss_pred ccEEEccccccC-cccHHHHhccCCC------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1087 KIGLVQQEPALF-AASIFDNIAYGKE------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1087 ~i~~VpQd~~lf-~gTIreNl~~~~~------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
+||+|+||..|+ +-|+.||+++.-. ..-.+.+.++|+.+||.+....+| ..|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 999999999876 5699999997632 122466788999999999999998 4699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhcc-CEEEEEeCCEEEEecCh
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRGV-DCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~-DrI~vl~~G~Ive~G~~ 1230 (1252)
|||++.+|++||-||||-+||+++...|++.+.+.- .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999999875 599999999999999887 78999999999976654
No 136
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=373.27 Aligned_cols=226 Identities=31% Similarity=0.503 Sum_probs=189.8
Q ss_pred cEEEEeEEEECCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC-HHHHhc
Q 000856 1009 EIELRHVDFAYPSRPD-VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN-LKSLRL 1086 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~-~~~lR~ 1086 (1252)
.++++|+++.|+.... .++|+||||+|.+||++||||+||||||||+++|.|+.+|++|+|.+||.+..... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4899999999974310 15999999999999999999999999999999999999999999999998775533 346788
Q ss_pred ccEEEcccccc-C--cccHHHHhc----cCCCCCCHHHHHHHHHHcCchhhH-hhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1087 KIGLVQQEPAL-F--AASIFDNIA----YGKEGATEAEVVEAARAANVHGFV-SALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1087 ~i~~VpQd~~l-f--~gTIreNl~----~~~~~~~deei~~al~~~~l~~~i-~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
.+.+|+|||.- + ..||++-|. ...-...+.+++++++.+|+.+-+ ...| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 99999999952 2 245555553 322234566799999999997543 3444 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||.-+|++||||||||+||...+++|++.+.+..+ +-|.|+|||+++.+.. ||||+||++|+++|.++-.++.+
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999999875 4599999999999965 89999999999999999999998
Q ss_pred CCCchhHHHH
Q 000856 1236 RPDGAYSRLL 1245 (1252)
Q Consensus 1236 ~~~g~y~~l~ 1245 (1252)
.+...|.+.+
T Consensus 232 ~~~h~ytr~L 241 (252)
T COG1124 232 HPSHPYTREL 241 (252)
T ss_pred CCccHHHHHH
Confidence 7666776543
No 137
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-44 Score=394.93 Aligned_cols=227 Identities=51% Similarity=0.875 Sum_probs=211.4
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
+.|+++|++++|++ ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 36899999999963 2359999999999999999999999999999999999999999999999999988888889999
Q ss_pred cEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1088 IGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
++|+||++.+|.+|++||+.++.+...++++.++++..++.++++.+|.|+++.++.....||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999875555667888888999999999999999999998888999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1168 AILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999888765
No 138
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=412.39 Aligned_cols=223 Identities=29% Similarity=0.471 Sum_probs=193.0
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--
Q 000856 361 VNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT-- 433 (1252)
Q Consensus 361 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~-- 433 (1252)
..+.|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 77 ~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34679999999999642 3468999999999999999999999999999999999996 579999999999974
Q ss_pred CCHHHHhhhceEEccCCCCchhcHHHHHhcCCCC--CCHHH-----HHHHHHHhcHHHHHhhCCCCccccccCCCCCCCh
Q 000856 434 LQLRWLRDQIGLVNQEPALFATTILENILYGKPE--ATMAE-----VEAAASAANAHSFITLLPNGYSTQVGERGVQLSG 506 (1252)
Q Consensus 434 ~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSg 506 (1252)
.+...+|+.++||||+|++|++|++||+.|+... .++++ +..+++.++ ++.++++.+++++.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCH
Confidence 3456778899999999999999999999986421 22222 222333333 344566788999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecCh
Q 000856 507 GQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 507 GqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 585 (1252)
|||||++||||++++|+||||||||++||+++.+.+.+.|+++.+++|+|+|||+++++.. ||||++|++|++++.|++
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998888999999999999987 899999999999999999
Q ss_pred HHHHhc
Q 000856 586 EELIAK 591 (1252)
Q Consensus 586 ~~l~~~ 591 (1252)
+++...
T Consensus 309 ~~l~~~ 314 (329)
T PRK14257 309 KTIFIH 314 (329)
T ss_pred HHHhcC
Confidence 998764
No 139
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-44 Score=368.56 Aligned_cols=224 Identities=32% Similarity=0.589 Sum_probs=195.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHh
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLR 1085 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1085 (1252)
.|++++|+++|.+ +.|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.++|.|+.+++.+ .+|
T Consensus 8 ~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 5999999999963 4699999999999999999999999999999999999999999999999999988854 579
Q ss_pred cccEEEccccccCcc-cHHHHhccCCC---CCCHHHH----HHHHHHcCchhh-HhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1086 LKIGLVQQEPALFAA-SIFDNIAYGKE---GATEAEV----VEAARAANVHGF-VSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~g-TIreNl~~~~~---~~~deei----~~al~~~~l~~~-i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
+++|+++|+..||+. ||+||+.+.-. ..+++++ ...++.+||..- .+..| ..||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999965 99999998533 2344444 345566777665 33344 5799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
+||||||.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+++|||+++++.. ||||+++.||+|+-.|+++|+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988764 7899999999999865 699999999999999999999
Q ss_pred hcCCCchhHHHHH
Q 000856 1234 VSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1234 l~~~~g~y~~l~~ 1246 (1252)
.+..+...++.++
T Consensus 234 ~~sd~P~v~qf~~ 246 (263)
T COG1127 234 LASDDPWVRQFFN 246 (263)
T ss_pred HhCCCHHHHHHhc
Confidence 9976666666654
No 140
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-45 Score=407.39 Aligned_cols=214 Identities=37% Similarity=0.556 Sum_probs=188.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..++++|++++|+ +..+++|+||+|++||+++++|||||||||+|++|+||..|++|+|.++|+++...++. ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3589999999997 34699999999999999999999999999999999999999999999999999998876 568
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE---ATM----AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
|++|||+..||+. ||+|||.||... ... +++.++++.. |+...-.+++.+|||||||||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV-----------~L~~~~~R~p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELV-----------GLEGFADRKPHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHc-----------CchhhhhhChhhhChHHHHHHHH
Confidence 9999999999976 999999999751 111 2344444444 44445566677999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
||||..+|++||||||+|+||.+-+..++..++++. .|.|.|+||||.++... +|||+||++|+|...|+++|++..
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999998874 38999999999999866 799999999999999999999876
Q ss_pred c
Q 000856 592 A 592 (1252)
Q Consensus 592 ~ 592 (1252)
.
T Consensus 228 P 228 (352)
T COG3842 228 P 228 (352)
T ss_pred c
Confidence 4
No 141
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-44 Score=398.99 Aligned_cols=219 Identities=37% Similarity=0.610 Sum_probs=198.8
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++||+.+|.+. .+++|+||+|+.||.++|+||||||||||+++|+||.+|++|+|.|||.|++++++++ ++|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2899999999999999999999999999999999999999999999999999999877 789
Q ss_pred EEEccccccCcc-cHHHHhccCCCC------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKEG------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~~------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
++|+|+..||+- ||+|||.|+... -.++++.++++..++..+++..| ..||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999965 999999987432 23677889999999999988877 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
||+++|++++||||.|+||+.....+...|+++.+ +.|+|.|||+...+. -+|||.||.+|+|.+.|+|.|+..+|.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988653 689999999998875 579999999999999999999999887
Q ss_pred chhHH
Q 000856 1239 GAYSR 1243 (1252)
Q Consensus 1239 g~y~~ 1243 (1252)
..|-.
T Consensus 227 n~fVA 231 (338)
T COG3839 227 NLFVA 231 (338)
T ss_pred chhhh
Confidence 76643
No 142
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-44 Score=386.03 Aligned_cols=215 Identities=35% Similarity=0.593 Sum_probs=190.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCcccc-CCCHHHHhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIK-TLQLRWLRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~-~~~~~~~~~~ 442 (1252)
.++++|++|+|++. .++|+|+||+|++||.++|+|+||||||||+++++|+++|++|+|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999864 56999999999999999999999999999999999999999999999999988 4778889999
Q ss_pred ceEEccCC--CCchhcHHHHHhcCCCCCC--HHH----HHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 443 IGLVNQEP--ALFATTILENILYGKPEAT--MAE----VEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 443 i~~v~Q~~--~l~~~tv~~ni~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
+|||+|+| ++|..||.|.+.||..+.. .++ +..+++.+ |+.....+...+|||||||||||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~v-----------gl~~~~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELV-----------GLEELLDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHc-----------CchhhccCCccccCCcceeeHHh
Confidence 99999999 7899999999999976432 222 33333333 55555667778999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|.+|+.+|++||||||||+||+..++.+.+.++++.+ |+|+|++|||++.+.. |||+++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999964 5899999999999977 999999999999999999888765
No 143
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-44 Score=384.29 Aligned_cols=215 Identities=39% Similarity=0.660 Sum_probs=195.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC-CCCHHHHhcc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR-RLNLKSLRLK 1087 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~-~~~~~~lR~~ 1087 (1252)
-++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999754 47999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred cEEEcccc--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEP--ALFAASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~--~lf~gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
+|+|.|+| ++|..||.+.++||.. ..+.+ .+.++++.+++.++.+..| .+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 99999999 8999999999999853 23443 4677888888887754433 5799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|.+|..+|++||||||||+||+...+.+.+.++++.. ++|+|+|||+++.+.. |||++||++|+++.+|+|++++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 5799999999999977 899999999999999999999876
No 144
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.6e-40 Score=389.96 Aligned_cols=473 Identities=16% Similarity=0.155 Sum_probs=363.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCC----hHHHHHHHhhcHHHHHHHHH
Q 000856 730 FVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHN----SSLVAARLATDAADVKSAIA 805 (1252)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~----~g~l~~r~~~D~~~i~~~~~ 805 (1252)
...+|..++++.......+.|+...+..+...-+.+.++++-+...-.|+.. ..+ .-..-.|+..|+..+-+.-.
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~-~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA-QAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH-hcccccCCCChHHhHHHHHHHHHhhHH
Confidence 3455666666666667778888888888888888888888888777444322 221 01233788999888777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000856 806 DRISVILQNMTSLLTSFIVAFI---------------VEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSM 870 (1252)
Q Consensus 806 ~~~~~~~~~~~~~~~~~i~~~~---------------~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (1252)
.....++.++++++...++++- +...+.+++++.++..-++.++..+.+.+..-+..+..+.+..
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 6666667777766666665552 2223334444444555555667777888888888888888888
Q ss_pred HHHHHhccHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Q 000856 871 IAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVI 950 (1252)
Q Consensus 871 ~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~ 950 (1252)
.+.-.-++...|..++.|+...++..+..+.......+.......+..+......+...+-+.++......|.+++|.++
T Consensus 247 ~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lm 326 (604)
T COG4178 247 SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLM 326 (604)
T ss_pred HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHH
Confidence 88888899999999999998888887777766665555554444444444444444445555666667789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCCCCCCC--CCC---CCccccEEEEeEEEECCCCC
Q 000856 951 KVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRST--RIDPDDPDA--EPV---ETIRGEIELRHVDFAYPSRP 1023 (1252)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~~~~~~--~~~~~~~~~--~~~---~~~~g~I~~~nvsf~Y~~~~ 1023 (1252)
....++......+..++...+.+..-.....|+.++.+... +.++..+.. ... ...+..|+|+|++..-|+.
T Consensus 327 qa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~- 405 (604)
T COG4178 327 QAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC-
Confidence 99999999999999999999999999999999987764322 111111111 000 1114679999999998754
Q ss_pred CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHH
Q 000856 1024 DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIF 1103 (1252)
Q Consensus 1024 ~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIr 1103 (1252)
.+.++++||+|++||.+-|.|+||||||||+++|.|+++--+|+|.+-. -..+-|+||.|.+-.||+|
T Consensus 406 -~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLr 473 (604)
T COG4178 406 -QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLR 473 (604)
T ss_pred -CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHH
Confidence 3689999999999999999999999999999999999999999987741 1458899999999999999
Q ss_pred HHhccCCCC--CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCH
Q 000856 1104 DNIAYGKEG--ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDA 1181 (1252)
Q Consensus 1104 eNl~~~~~~--~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~ 1181 (1252)
|=|+|+... .+|+++.++|.+++|.++++++.+ . ..-..-||+|||||||+||.|+++|++++|||+||+||+
T Consensus 474 e~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe 548 (604)
T COG4178 474 EALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-E----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDE 548 (604)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-c----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccCh
Confidence 999987654 899999999999999999998743 2 224567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeC
Q 000856 1182 ESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQD 1221 (1252)
Q Consensus 1182 ~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~ 1221 (1252)
++|..+++.+++..+++|+|.|+||.....-.++.+-+++
T Consensus 549 ~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 549 ETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 9999999999999999999999999888777777666653
No 145
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.6e-43 Score=386.43 Aligned_cols=220 Identities=45% Similarity=0.743 Sum_probs=202.3
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
+.++++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999632 2469999999999999999999999999999999999999999999999999988787778889
Q ss_pred cEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1088 IGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
++|+||++.+|..|++||+.++....+++++.++++..++.+.+..+|.|++|.+.+....||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999998765445566788889999999999999999999998888899999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEec
Q 000856 1168 AILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G 1228 (1252)
++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988889999999999998764
No 146
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-41 Score=360.03 Aligned_cols=473 Identities=20% Similarity=0.284 Sum_probs=350.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCChHHHHHHHhhcHHHHHHHHHHHHHHHH
Q 000856 733 IYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVIL 812 (1252)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~ff~~~~~~~g~l~~r~~~D~~~i~~~~~~~~~~~~ 812 (1252)
.+.++.++..+...+........+.++..++|.++.++++..|+.-++ +.+++.++.++++|+..+. +-...++.+.
T Consensus 53 ~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerie--r~~~~rlla~L~~Dvr~IS-f~~s~lp~~~ 129 (546)
T COG4615 53 EFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIE--RLGSARLLAGLTSDVRNIS-FAFSRLPELV 129 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--Hhcccchhhhhccccccee-ehHhhhHHHH
Confidence 344444445555566677778899999999999999999999999996 4789999999999999998 5556677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccHHHHHHhccHHHHH
Q 000856 813 QNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKIL 892 (1252)
Q Consensus 813 ~~~~~~~~~~i~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~ 892 (1252)
++....+++...+.+.++++.+++.+.+.+.++..++...+.-+..+..++...+...+.+-.++|-+.++...-..+..
T Consensus 130 qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~ 209 (546)
T COG4615 130 QAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYV 209 (546)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHH
Confidence 99999999999999999999888888887777777776666666566667777888888888999999988765433222
Q ss_pred --HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 893 --SLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLA 970 (1252)
Q Consensus 893 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 (1252)
+.+...-+...+...+............+.+.+....+.+|+....... +......+.+.+.+.-.|+...+...
T Consensus 210 h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~---st~~a~tivlvlLflr~pL~s~vgil 286 (546)
T COG4615 210 HNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWA---STNVAATIVLVLLFLRTPLLSAVGIL 286 (546)
T ss_pred HhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---hhhHHHHHHHHHHHHhhHHHHHHhhh
Confidence 2222211111111111111111111222333333333344444333221 12233334455566678999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCC
Q 000856 971 PEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSG 1050 (1252)
Q Consensus 971 ~~~~~~~~s~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSG 1050 (1252)
|.+..+..+.+++.++-..+...+-..+...|.| ..||++||.|+|+.. .--+..||++|++||.|=|+|.||||
T Consensus 287 P~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~---~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsG 361 (546)
T COG4615 287 PTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDW---KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSG 361 (546)
T ss_pred hHHHHHHHHHHHHHHhhcCCccccCCCCCcCCcc---cceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCc
Confidence 9999999999999877543222111111112222 369999999999743 13578999999999999999999999
Q ss_pred hHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHHHHhccCCCC-CCHHHHHHHHHHcCchh
Q 000856 1051 KSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEG-ATEAEVVEAARAANVHG 1129 (1252)
Q Consensus 1051 KSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~-~~deei~~al~~~~l~~ 1129 (1252)
|||++++|.|+|.|++|+|++||.+++.-+++++|+-++.|+-|.++|+.++ +.+. ++++.+..-+++..+..
T Consensus 362 KST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~ 435 (546)
T COG4615 362 KSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAH 435 (546)
T ss_pred HHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999998764 3333 67777766666665544
Q ss_pred hHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCc
Q 000856 1130 FVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRL 1207 (1252)
Q Consensus 1130 ~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl 1207 (1252)
... +.+|==++ ..||-|||.|+|+--|++.+.+|++|||=.+--||.=++...+.+--.. .||||+.|||+-
T Consensus 436 kts-l~d~~fs~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 436 KTS-LNDGRFSN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hhc-ccCCcccc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 322 33332222 3699999999999999999999999999999999999999998865433 499999999999
Q ss_pred hhhhccCEEEEEeCCEEEEec
Q 000856 1208 STIRGVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1208 ~ti~~~DrI~vl~~G~Ive~G 1228 (1252)
.-...+||++.|++|+++|.-
T Consensus 510 ~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred hhhhhHHHHHHHhcCceeecc
Confidence 999999999999999999863
No 147
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-43 Score=386.81 Aligned_cols=226 Identities=51% Similarity=0.866 Sum_probs=207.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ...+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 5899999999963 23489999999999999999999999999999999999999999999999998877777788889
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPK 523 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ 523 (1252)
+|++|++++++.|++||+.++.+.....++..+++..++.++++.+|.|+++..+....+||||||||++|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999998765555566777777788889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 524 ILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 524 illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++..+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999998778999999999999988999999999999999988877554
No 148
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.9e-43 Score=389.22 Aligned_cols=231 Identities=72% Similarity=1.087 Sum_probs=207.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346899999999999999999999999999999999999999999999999987777777777899
Q ss_pred EEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000856 445 LVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKI 524 (1252)
Q Consensus 445 ~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~i 524 (1252)
|++|++.+++.|++||+.++.+....++....++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999888999999987554445556666667778888899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccch
Q 000856 525 LLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAY 595 (1252)
Q Consensus 525 lllDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 595 (1252)
+||||||++||+.+++.+.+.|+++.+|+|+|++||+++.+..||++++|++|++++.|+.+++......+
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~ 231 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVY 231 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhH
Confidence 99999999999999999999999887789999999999999889999999999999999988887654433
No 149
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-43 Score=344.64 Aligned_cols=211 Identities=36% Similarity=0.574 Sum_probs=189.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|.+++|.|+|...+ =.++++|++||++||+||||||||||++++.||..|.+|+|.|+|+|....++.+ +-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChh
Confidence 56789999996432 3689999999999999999999999999999999999999999999998877644 6699
Q ss_pred EEccccccCc-ccHHHHhccCCC-C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE-G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~-~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
+++||..||. -||.+|+.+|.. . ...+.+..++.++|+.++.+.+|. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999996 599999998842 2 234678899999999999999983 699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
|+|+-+||+||||.|+||+.-.+++...+.+.+ ++.|+++|||.++.++ .+|+++++++|||+..|+-+++++..+
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 999999999999999999999999999998876 4789999999999875 579999999999999999999998643
No 150
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-43 Score=388.01 Aligned_cols=231 Identities=62% Similarity=0.943 Sum_probs=208.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 235899999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000856 445 LVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKI 524 (1252)
Q Consensus 445 ~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~i 524 (1252)
|++|++.+++.|++||+.++.......+....++..++.+.++.+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987654445566666777788889999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchH
Q 000856 525 LLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYA 596 (1252)
Q Consensus 525 lllDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 596 (1252)
+||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++....+.|.
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~ 231 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYA 231 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchh
Confidence 999999999999999999999999877899999999999998899999999999999999998876655443
No 151
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=374.81 Aligned_cols=210 Identities=31% Similarity=0.571 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++|++|+|.++ +||+||||+|++|+.+||+||||||||||+|+++|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999632 59999999999999999999999999999999999999999999999998776433 5789
Q ss_pred EEEccccc---cCcccHHHHhccCCCC----------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1089 GLVQQEPA---LFAASIFDNIAYGKEG----------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1089 ~~VpQd~~---lf~gTIreNl~~~~~~----------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
|||||... -|+-||+|=+.+|... .+.+++.+||+++++.++..+ ++|+ |||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~~----LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIGE----LSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------cccc----cCcHHHH
Confidence 99999663 5889999999887321 234889999999999987643 4665 9999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR-GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. +|+|+.|. ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999874 8999999999999865 79999886 567889999999
Q ss_pred hcC
Q 000856 1234 VSR 1236 (1252)
Q Consensus 1234 l~~ 1236 (1252)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 863
No 152
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-43 Score=387.64 Aligned_cols=232 Identities=56% Similarity=0.850 Sum_probs=209.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 34899999999999999999999999999999999999999999999999998887777888899
Q ss_pred EEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000856 445 LVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKI 524 (1252)
Q Consensus 445 ~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~i 524 (1252)
|++|++++++.|++||+.++.+.....++...++..++.+.+..+|.|+++.+++++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655555566666777788888899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccchHHH
Q 000856 525 LLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASL 598 (1252)
Q Consensus 525 lllDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 598 (1252)
+||||||++||+.+.+.+.+.|.++.+|+|+|++||+++.+..||++++|++|++++.|+.+++......|...
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~ 232 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEM 232 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHH
Confidence 99999999999999999999999886689999999999999889999999999999999998887765554443
No 153
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-43 Score=389.96 Aligned_cols=218 Identities=37% Similarity=0.600 Sum_probs=187.0
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH---HHHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL---KSLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~---~~lR~ 1086 (1252)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999987764 56788
Q ss_pred ccEEEccccccCcc-cHHHHhccCCC---CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1087 KIGLVQQEPALFAA-SIFDNIAYGKE---GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~g-TIreNl~~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
.++||||++.+|.+ |++||+.++.. ..+. +++.++++..++.++... .+ ..||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDL-------YP----AELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcC-------Ch----hhCCHHHHHHHH
Confidence 99999999999875 99999986421 1232 345666777776554332 22 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999998865 89999999999999999999986
Q ss_pred CCCchhH
Q 000856 1236 RPDGAYS 1242 (1252)
Q Consensus 1236 ~~~g~y~ 1242 (1252)
. ...|.
T Consensus 227 ~-~~~~~ 232 (235)
T cd03261 227 S-DDPLV 232 (235)
T ss_pred C-CChhh
Confidence 4 44443
No 154
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-43 Score=399.73 Aligned_cols=222 Identities=23% Similarity=0.428 Sum_probs=184.6
Q ss_pred ccEEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC------
Q 000856 1008 GEIELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL------ 1079 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~------ 1079 (1252)
..|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999996421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcccEEEcccc--ccCcccHHHHhccCCC--CCCHHHHHHHHHHcCchhhHhhCCCcCC-CccCC
Q 000856 1080 ----------NLKSLRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATEAEVVEAARAANVHGFVSALPNAYK-TPVGE 1144 (1252)
Q Consensus 1080 ----------~~~~lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~deei~~al~~~~l~~~i~~lp~gld-t~vge 1144 (1252)
+...+|++++||+|+| .+|++|++||+.++.. ..++++..+.. .++++.+ |++ .....
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLA-----KFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHH-----HHHHHHc--CCChhHhcC
Confidence 3567899999999998 6899999999987631 23333322111 1222222 332 23455
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh-hccCEEEEEeCC
Q 000856 1145 RGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTI-RGVDCIGVVQDG 1222 (1252)
Q Consensus 1145 ~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti-~~~DrI~vl~~G 1222 (1252)
.+.+||||||||++|||||+++|+||||||||++||+.++..+++.|++.. +++|||+|||+++.+ ..||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 667899999999999999999999999999999999999999999998864 589999999999987 569999999999
Q ss_pred EEEEecChhhhhcC
Q 000856 1223 RIVEQGSHSELVSR 1236 (1252)
Q Consensus 1223 ~Ive~G~~~eLl~~ 1236 (1252)
++++.|+|+++++.
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999987643
No 155
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=376.06 Aligned_cols=210 Identities=30% Similarity=0.495 Sum_probs=180.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|+++ ++|+||||++++|++++|+||||||||||+|+|+|+++|++|+|.+.|.+.+.... +..|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999743 49999999999999999999999999999999999999999999999988755322 3579
Q ss_pred eEEccCC---CCchhcHHHHHhcCCCCC----------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHH
Q 000856 444 GLVNQEP---ALFATTILENILYGKPEA----------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 444 ~~v~Q~~---~l~~~tv~~ni~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkq 510 (1252)
|||||.. |-|+-||+|-+.+|.... +.+++.++++.+++. ...++...+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-----------~~~~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-----------DLRDRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-----------hhhCCcccccCcHHHH
Confidence 9999965 568889999999984321 124556666655444 4455667799999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC-CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV-GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||.|||||+++|++|+|||||+++|+.++..+.+.|+++++ |+||++||||++.+.. +|+|+.|++ +++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhc
Confidence 99999999999999999999999999999999999999964 9999999999999866 899999964 67889999988
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 664
No 156
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=362.35 Aligned_cols=213 Identities=34% Similarity=0.567 Sum_probs=189.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC---HHHHh
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN---LKSLR 1085 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~---~~~lR 1085 (1252)
.|+++||+.+||+ ++.+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++...+ +.++|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999998877 66789
Q ss_pred cccEEEccccccCc-ccHHHHhccCCC--------------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1086 LKIGLVQQEPALFA-ASIFDNIAYGKE--------------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~-gTIreNl~~~~~--------------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
++||+|+|++.|-. .|+.+|+..|.- ..+.....+||+++|+.++.-. +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 99999999998874 589999975531 1233456888999999887653 235799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~ 1227 (1252)
|||+||++|||||..+|+|++-|||+|+|||.+...+++.|++.. .|.|||+.-|.++.++. ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999875 47999999999999865 699999999999999
Q ss_pred cChhhhh
Q 000856 1228 GSHSELV 1234 (1252)
Q Consensus 1228 G~~~eLl 1234 (1252)
|+++||-
T Consensus 230 g~~~el~ 236 (258)
T COG3638 230 GPASELT 236 (258)
T ss_pred CChhhhh
Confidence 9999864
No 157
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-44 Score=377.65 Aligned_cols=213 Identities=34% Similarity=0.499 Sum_probs=180.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCc---cccCCCHHHHh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNV---DIKTLQLRWLR 440 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~---~~~~~~~~~~~ 440 (1252)
.|.++|+++.|+. ..+++|||++|+.||.+|+.|||||||||||++|+|+..|++|+|.+||. |.++.. ...
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 3788999999974 34899999999999999999999999999999999999999999999999 555432 334
Q ss_pred hhceEEccCCCCchh-cHHHHHhcCCCCC--------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHH
Q 000856 441 DQIGLVNQEPALFAT-TILENILYGKPEA--------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
++||||+|+..||.. ||++||.||.... ...++.+.++.+++. ..-.+.+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~-----------~la~ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLE-----------GLADRYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhccc-----------chhhcCchhcChHHHHH
Confidence 579999999999865 9999999997311 122333334444333 33345567999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
|||||||+.+|++||||||+++||++.++.+.+.|+++. -|.|+++||||.+++.. ||||++|++|+|...|+++|+
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999999998875 38999999999999866 899999999999999999999
Q ss_pred Hhcc
Q 000856 589 IAKA 592 (1252)
Q Consensus 589 ~~~~ 592 (1252)
..+.
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 7654
No 158
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.5e-43 Score=368.24 Aligned_cols=206 Identities=38% Similarity=0.571 Sum_probs=176.4
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---H-
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---L- 1084 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---l- 1084 (1252)
++++||+..|.... ..++|+++||+|++||.+||+||||||||||+++|.++..|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246999999999999999999999999999999999999999999999999999888443 3
Q ss_pred hcccEEEccccccCc-ccHHHHhccC----CCC--CCHHHHHHHHHHcCchhhHh-hCCCcCCCccCCCCCCCChhHHHH
Q 000856 1085 RLKIGLVQQEPALFA-ASIFDNIAYG----KEG--ATEAEVVEAARAANVHGFVS-ALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1085 R~~i~~VpQd~~lf~-gTIreNl~~~----~~~--~~deei~~al~~~~l~~~i~-~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
|++||+|+|+..|++ -|++||+.++ ... ..++...+.++..|+.+... ..| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 567999999998874 6999999842 111 12445566677778776554 333 5799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEEE
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVE 1226 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive 1226 (1252)
+||||||+.+|+|++.||||.+||.+|...|++.+++.. .|+|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999985 3789999999999999999999999999543
No 159
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=364.60 Aligned_cols=222 Identities=31% Similarity=0.492 Sum_probs=181.7
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC-HHHHhh
Q 000856 364 NIEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ-LRWLRD 441 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~~ 441 (1252)
.++++|+++.|+.+. -.++++||||+|.+||+.+|||+||||||||.++|+|+.+|++|+|.++|.++.... ....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 479999999997532 124899999999999999999999999999999999999999999999998775542 346778
Q ss_pred hceEEccCCC--Cchh-cHHHHHhcCCCC----CCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000856 442 QIGLVNQEPA--LFAT-TILENILYGKPE----ATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 442 ~i~~v~Q~~~--l~~~-tv~~ni~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~ 513 (1252)
.|-+|||||. |-+- ||++-|.-+... ....++.++++.+ |+. ....+.+.+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~V-----------gL~~~~l~R~P~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQV-----------GLPPSFLDRRPHELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHc-----------CCCHHHHhcCchhcChhHHHHHH
Confidence 8999999995 3332 777777543221 1122333333333 333 3456677799999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
|||||..+|++||||||||+||+.....+++.+.++++ +-|.|+||||+..+.+ ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999999875 6699999999999988 89999999999999999999877
Q ss_pred c-ccchH
Q 000856 591 K-AGAYA 596 (1252)
Q Consensus 591 ~-~~~~~ 596 (1252)
. ...|.
T Consensus 232 ~~~h~yt 238 (252)
T COG1124 232 HPSHPYT 238 (252)
T ss_pred CCccHHH
Confidence 6 33443
No 160
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-43 Score=404.65 Aligned_cols=220 Identities=34% Similarity=0.553 Sum_probs=187.0
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HHh
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WLR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 440 (1252)
|+++|++++|++.. ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 24699999999999999999999999999999999999999999999999999887654 357
Q ss_pred hhceEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 441 DQIGLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
++|+|+||++.+++ .|++||+.++... ....+..+ .+.+.++.+ |+....+..+.+|||||||||+||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 78999999999986 5999999985321 12222111 112333333 66666677888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+.+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~ 231 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSH 231 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 9999999999999999999999999999999853 8999999999999966 899999999999999999998764
No 161
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5.2e-43 Score=383.94 Aligned_cols=219 Identities=53% Similarity=0.826 Sum_probs=199.2
Q ss_pred ccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHh
Q 000856 1006 IRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1006 ~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1085 (1252)
..+.++++|++++|+++...++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35679999999999743224699999999999999999999999999999999999999999999999999888877888
Q ss_pred cccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHcc
Q 000856 1086 LKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLK 1165 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~ 1165 (1252)
++++|+||++.+|.+|++||+.++......+++++..+..++.++++.+|.|+++.+.+....||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999997654445556666667778889999999899998888899999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEE
Q 000856 1166 NPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRI 1224 (1252)
Q Consensus 1166 ~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1224 (1252)
+|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998777899999999999988999999999974
No 162
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.3e-43 Score=385.83 Aligned_cols=212 Identities=40% Similarity=0.642 Sum_probs=185.3
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccC-----CCCCceEEECCcccCCCC--HH
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFY-----DPTAGKVMIDGKDIRRLN--LK 1082 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~-----~p~~G~I~idG~di~~~~--~~ 1082 (1252)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999963 35999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCC--CC-----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
.+|++++|+||++.+|..|++||+.++.. .. .++++.++++..++.+.....++ +..|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 78889999999999998899999986421 11 23456778888888765544321 3579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999999865589999999999876 5899999999999999998764
No 163
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-42 Score=387.10 Aligned_cols=237 Identities=32% Similarity=0.523 Sum_probs=212.2
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHh
Q 000856 361 VNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLR 440 (1252)
Q Consensus 361 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~ 440 (1252)
..+.|+++|++++|++. +..+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...++
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 35679999999999742 24589999999999999999999999999999999999999999999999999888887888
Q ss_pred hhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 441 DQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+.++|++|+|++|++|++||+..... ...+++..+.+..++.+.+..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999975432 23455666777778888999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcc-cchHHHH
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKA-GAYASLI 599 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~ 599 (1252)
+|+++||||||++||+.+++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+.. +.|.+++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 999999999999999999999999999887789999999999999889999999999999999999987654 4444443
No 164
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=394.62 Aligned_cols=222 Identities=36% Similarity=0.586 Sum_probs=199.9
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
..|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++. +.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~k--R~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEK--RP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhh--cc
Confidence 3599999999996 346999999999999999999999999999999999999999999999999999998865 78
Q ss_pred cEEEccccccCc-ccHHHHhccCCC---CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGKE---GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~~---~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
|++|+|+..||+ .||+||+.||.. ... ++.+.++++.+++.++-...| ..|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 999999999995 799999999854 122 247889999999999877766 4699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||||..+|++|+||||-|+||..-...++..+++.. -|.|.|+|||+.++. .-+|||.||.+|+|...|+|+|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999998875 388999999999876 56799999999999999999999999
Q ss_pred CCchhHHHH
Q 000856 1237 PDGAYSRLL 1245 (1252)
Q Consensus 1237 ~~g~y~~l~ 1245 (1252)
|...|-.-+
T Consensus 228 P~~~fVA~F 236 (352)
T COG3842 228 PATRFVADF 236 (352)
T ss_pred cchHHHHHH
Confidence 887775443
No 165
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-43 Score=393.65 Aligned_cols=217 Identities=33% Similarity=0.565 Sum_probs=192.2
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999632223599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+||+|+| .++..|++|||.++.. ..+ ++.+.++++.+++.++.+..| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4667899999987632 122 345778888888877665443 47999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||+++|++|||||||++||+.+...+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7999999999999888999999999999999999998765
No 166
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-42 Score=386.18 Aligned_cols=220 Identities=33% Similarity=0.542 Sum_probs=192.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC---CCCceEEECCcccCCCCHHHHh
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD---PTAGKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~---p~~G~I~idG~di~~~~~~~lR 1085 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 359999999999999999999999999999999999985 6999999999999988888889
Q ss_pred cccEEEccccccCcccHHHHhccCCC--------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1086 LKIGLVQQEPALFAASIFDNIAYGKE--------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~gTIreNl~~~~~--------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
++++|+||++.+|..|++||+.++.. ...++++.++++.+++.+++..+ ....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHH
Confidence 99999999999999999999986521 11234567788888886655432 2344568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
+|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999998877899999999999885 5899999999999999999999875
Q ss_pred CC
Q 000856 1237 PD 1238 (1252)
Q Consensus 1237 ~~ 1238 (1252)
+.
T Consensus 232 ~~ 233 (246)
T PRK14269 232 PK 233 (246)
T ss_pred CC
Confidence 43
No 167
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-42 Score=383.37 Aligned_cols=223 Identities=34% Similarity=0.606 Sum_probs=193.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccccccCcccHHHHhccCCC--CCCHHHHHHHHHHcCch-hhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHcc
Q 000856 1089 GLVQQEPALFAASIFDNIAYGKE--GATEAEVVEAARAANVH-GFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLK 1165 (1252)
Q Consensus 1089 ~~VpQd~~lf~gTIreNl~~~~~--~~~deei~~al~~~~l~-~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~ 1165 (1252)
+|+||++.+|+.|+++|+.++.. ...++++.+.++..++. ++.. .....||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999986532 12244566777777764 2222 2345799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCchhH
Q 000856 1166 NPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDGAYS 1242 (1252)
Q Consensus 1166 ~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~ 1242 (1252)
+|++|||||||++||+.+...+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|++++++..+...|.
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 228 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVT 228 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHH
Confidence 999999999999999999999999999874 37899999999999865 899999999999999999999876554565
Q ss_pred HHH
Q 000856 1243 RLL 1245 (1252)
Q Consensus 1243 ~l~ 1245 (1252)
+.+
T Consensus 229 ~~~ 231 (241)
T PRK14250 229 KLF 231 (241)
T ss_pred HHH
Confidence 444
No 168
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2e-42 Score=378.18 Aligned_cols=219 Identities=35% Similarity=0.561 Sum_probs=201.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|+.. +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 58999999999743 24589999999999999999999999999999999999999999999999999888888888899
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPK 523 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ 523 (1252)
+|++|++.+++.|++||+.+... ...+++..+++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|+
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 159 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSK 159 (221)
T ss_pred EEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999986543 34567777888888889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 524 ILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 524 illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
++||||||++||+.+++.+.+.|+++.++.|+|++||+++.+..||++++|++|++++.|+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 160 ILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999999999999877899999999999998899999999999998775
No 169
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=401.36 Aligned_cols=222 Identities=39% Similarity=0.622 Sum_probs=189.7
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---Hh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---LR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1085 (1252)
|+++||+++|+... +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 346999999999999999999999999999999999999999999999999998877654 57
Q ss_pred cccEEEccccccCc-ccHHHHhccCCC--CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1086 LKIGLVQQEPALFA-ASIFDNIAYGKE--GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~-gTIreNl~~~~~--~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
++++||||++.+|. .|++||+.++.. ..+. +++.++++..++.++.... ...||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRY-----------PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999886 799999986421 1222 3456677777765544332 3469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||+++|+||||||||++||+.+...+++.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999865 89999999999999999999987
Q ss_pred CCCchhH
Q 000856 1236 RPDGAYS 1242 (1252)
Q Consensus 1236 ~~~g~y~ 1242 (1252)
.+...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 6544443
No 170
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-42 Score=373.45 Aligned_cols=206 Identities=34% Similarity=0.575 Sum_probs=183.9
Q ss_pred CccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH
Q 000856 1005 TIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1005 ~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l 1084 (1252)
+..+.++++|++++|+.. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+
T Consensus 2 ~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 2 PEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 445679999999999642 2369999999999999999999999999999999999999999999999999988888888
Q ss_pred hcccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1085 RLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1085 R~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
|++++||||+|.+|++|+++|+.+.. ..+++++.++++ +......|||||+||++||||++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998653 245555555443 22345679999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecCh
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~ 1230 (1252)
++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999999998778999999999999988999999999999998874
No 171
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=399.82 Aligned_cols=219 Identities=32% Similarity=0.520 Sum_probs=193.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++|++++|++ +.++|+|+||+|++||.+||+||||||||||+++|+|+.+|++|+|.+||.++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 23699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||||++.+|. .|++||+.++.. ..+ ++++.++++..++.++....| ..||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 699999997632 122 245678888889887766655 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.+++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998753 789999999999774 589999999999999999999998876
Q ss_pred chhH
Q 000856 1239 GAYS 1242 (1252)
Q Consensus 1239 g~y~ 1242 (1252)
..|.
T Consensus 228 ~~~~ 231 (356)
T PRK11650 228 STFV 231 (356)
T ss_pred cHHH
Confidence 5554
No 172
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=362.91 Aligned_cols=197 Identities=38% Similarity=0.573 Sum_probs=176.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999964 4699999999999999999999999999999999999999999999999988443 4679
Q ss_pred EEEccccccCc-ccHHHHhccCCCCC------CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKEGA------TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~~~------~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||+|++.||+ -|+++|+.++.... ..+.+.+.++.+|+.+|-+..| ..||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999997 59999999874421 2456888999999999988877 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hccCEEEEEeC--CEE
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTI-RGVDCIGVVQD--GRI 1224 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~--G~I 1224 (1252)
||+.+|+||+||||.+|||+.|...+++.+.+.. .++||++|||++++. .-+|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998865 369999999999876 55799999999 555
No 173
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=398.62 Aligned_cols=219 Identities=33% Similarity=0.547 Sum_probs=193.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++++
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 3589999999999999999999999999999999999999999999999999877653 5789
Q ss_pred EEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||+|++.+|. .|++||+.++.. ..+ ++++.++++..++.++....| ..||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998632 122 356678888888876654443 479999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
||+++|++|+||||||+||+.+...+++.|+++.+ ++|+|+|||+++.+. -||||++|++|+|++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 789999999999874 589999999999999999999998877
Q ss_pred chhHH
Q 000856 1239 GAYSR 1243 (1252)
Q Consensus 1239 g~y~~ 1243 (1252)
..|..
T Consensus 230 ~~~~a 234 (351)
T PRK11432 230 SRFMA 234 (351)
T ss_pred chHHH
Confidence 65543
No 174
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.8e-42 Score=375.68 Aligned_cols=219 Identities=43% Similarity=0.708 Sum_probs=198.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++. +..+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 58999999999642 24589999999999999999999999999999999999999999999999998777766677889
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPK 523 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ 523 (1252)
+|++|+++++..|++||+.++......+++...++..++.+.++..|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999988899999988754444556677778888888889999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEec
Q 000856 524 ILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 524 illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999986668999999999988779999999999998654
No 175
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=394.44 Aligned_cols=222 Identities=27% Similarity=0.457 Sum_probs=188.3
Q ss_pred ccEEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC------
Q 000856 363 GNIEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL------ 434 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~------ 434 (1252)
..|+++|++|+|++.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3589999999997432 23599999999999999999999999999999999999999999999999988653
Q ss_pred ----------CHHHHhhhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccC
Q 000856 435 ----------QLRWLRDQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYS-TQVGE 499 (1252)
Q Consensus 435 ----------~~~~~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~ 499 (1252)
....+|++++||+|+| ++|+.|++||+.++... .+.++... .+.+.++.+ |+. ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3456788999999998 68888999999987421 22222211 122444554 664 46788
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchh-ccCEEEEEeCC
Q 000856 500 RGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIR-NVDTVAVIQQG 577 (1252)
Q Consensus 500 ~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~-~~d~i~~l~~G 577 (1252)
.+.+||||||||++|||||+++|++|||||||++||+.+++.+.+.|.++. +|+|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 899999999999999999999999999999999999999999999998874 5899999999999875 59999999999
Q ss_pred EEEEecChHHHHhc
Q 000856 578 QVVETGTHEELIAK 591 (1252)
Q Consensus 578 ~i~~~g~~~~l~~~ 591 (1252)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999988654
No 176
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.1e-42 Score=398.64 Aligned_cols=218 Identities=34% Similarity=0.537 Sum_probs=191.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999887764 6789
Q ss_pred EEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||+|++.+|. .|++||+.++.. ..+ ++.+.++++..++.++.+..| ..||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 699999997632 112 345677778887776655433 579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
||+++|++|+||||||+||..+...+++.|++..+ +.|+|+|||+++.+. -||+|++|++|++++.|+|+++.+++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998753 789999999999874 589999999999999999999998876
Q ss_pred chhH
Q 000856 1239 GAYS 1242 (1252)
Q Consensus 1239 g~y~ 1242 (1252)
..|.
T Consensus 228 ~~~~ 231 (353)
T TIGR03265 228 TPFV 231 (353)
T ss_pred CHHH
Confidence 6553
No 177
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=390.02 Aligned_cols=216 Identities=33% Similarity=0.552 Sum_probs=185.5
Q ss_pred EEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC--HHHHh
Q 000856 1010 IELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN--LKSLR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~--~~~lR 1085 (1252)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996421 136999999999999999999999999999999999999999999999999998743 45788
Q ss_pred cccEEEcccc--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHcCch--hhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1086 LKIGLVQQEP--ALFAASIFDNIAYGKE--GATE----AEVVEAARAANVH--GFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1086 ~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~d----eei~~al~~~~l~--~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
++++||||+| .+|..|++||+.++.. ..+. +.+.++++.+++. ++ .......|||||||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~~LSgGq~q 151 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDY-----------KDKSPFELSGGQKR 151 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhh-----------ccCCcccCCHHHHH
Confidence 9999999998 5789999999986521 2333 3456677777764 22 22334579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|++|||||+.+|++|||||||++||+.+...+++.|+++.+ ++|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 789999999999885 589999999999999999999
Q ss_pred hhcC
Q 000856 1233 LVSR 1236 (1252)
Q Consensus 1233 Ll~~ 1236 (1252)
+++.
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8753
No 178
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8e-39 Score=375.66 Aligned_cols=470 Identities=18% Similarity=0.169 Sum_probs=350.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCchhH------HHHHHhhHHHH
Q 000856 82 EVCKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDI------VFSVSTDTLLV 155 (1252)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l------~s~l~~d~~~i 155 (1252)
.++..+..|..++.+.......+.|+......+.-.-|-+.++++-++..-.|+.. ..|.+ =.|++.|+...
T Consensus 84 ~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~~~~~~dNpDQRi~eDi~~~ 161 (604)
T COG4178 84 AFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAGGIGLIDNPDQRIQEDIRNF 161 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcccccCCCChHHhHHHHHHHH
Confidence 34444556666666666677777777777777777888888888888887444432 23322 36999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000856 156 QDAISEKVGNFIHYLSTFLAGLVVGFVSAW---------------RLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESY 220 (1252)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 220 (1252)
.+...+....++.++.+++...+++.-.+- .+..++++.+++--++..+++|.+.+..-+..+..
T Consensus 162 t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~E 241 (604)
T COG4178 162 TETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLE 241 (604)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHH
Confidence 998888878888887776665555442221 12223334444445566688888888888888888
Q ss_pred HHHHHHHHHHHhhHHHHHHHcchHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000856 221 ANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLK----LGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRN 296 (1252)
Q Consensus 221 ~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (1252)
+++-....-..++...|-.|+.|+.+.++.++......+ ...+..++..+..+ ...++.++-+..++.....
T Consensus 242 A~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~g----y~~~s~v~P~li~ap~~f~ 317 (604)
T COG4178 242 ADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLG----YGWLSVVLPILIAAPRYFS 317 (604)
T ss_pred HHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhh----hhHHHHHHHHHhccHhhhc
Confidence 888888888889999999999999888776655544443 33333333333333 3333333334455666778
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-----CCCCCCCCCC--cCCCCcccEEEEe
Q 000856 297 GVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKP-----SIIQDPTNGR--CLDEVNGNIEFKN 369 (1252)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~-----~~~~~~~~~~--~~~~~~~~i~~~~ 369 (1252)
|.++.|.+..+..........++-+...+..+..-++...|+.++.+.-. .......... ..+..+..|+++|
T Consensus 318 g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n 397 (604)
T COG4178 318 GQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLEN 397 (604)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEee
Confidence 99999988776655555556777777888889999999999998874321 1000010000 0011146799999
Q ss_pred EEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccC
Q 000856 370 VTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQE 449 (1252)
Q Consensus 370 v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~ 449 (1252)
++..-|+. ...+++.||++++||.+.|.||||||||||+|+|+|+++--+|+|.... ...+-|+||.
T Consensus 398 l~l~~p~~--~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~ 464 (604)
T COG4178 398 LSLRTPDG--QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQR 464 (604)
T ss_pred eeEECCCC--CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCC
Confidence 99998754 3689999999999999999999999999999999999999999997752 1358999999
Q ss_pred CCCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 000856 450 PALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLL 527 (1252)
Q Consensus 450 ~~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illl 527 (1252)
|.+-.||.||-++|+... .+++++.+++.+|++.+.++++.+ ..+-...||+|||||+|+||.++++|++++|
T Consensus 465 PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-----~~~W~~vLS~GEqQRlafARilL~kP~~v~L 539 (604)
T COG4178 465 PYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-----EDRWDRVLSGGEQQRLAFARLLLHKPKWVFL 539 (604)
T ss_pred CCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-----cCcHhhhcChhHHHHHHHHHHHHcCCCEEEE
Confidence 999999999999998654 689999999999999999988743 2234567999999999999999999999999
Q ss_pred eCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEe
Q 000856 528 DEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQ 575 (1252)
Q Consensus 528 DEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~ 575 (1252)
||+|||||++++..+.+.+++...+.|+|-|.||.......++.+-+.
T Consensus 540 DEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 540 DEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred ecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999999999999999888999999999988777777766554
No 179
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-42 Score=383.34 Aligned_cols=224 Identities=33% Similarity=0.522 Sum_probs=191.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1081 (1252)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3599999999999999999999999999999999999997 48999999999853 345
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--C-C----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-A----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|++||+.++.. . . .++.+.++++.+++.+.+ ++.+++. ..+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNTN----ALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhCC----cccCCHHHH
Confidence 567899999999999999999999986521 1 1 134566777777775433 2344554 457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|++|||||||++||+.+...+++.|+++.+++|+|+|||+++.+. .||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 4899999999999999999999
Q ss_pred hcCCCchhH
Q 000856 1234 VSRPDGAYS 1242 (1252)
Q Consensus 1234 l~~~~g~y~ 1242 (1252)
.+++...|.
T Consensus 237 ~~~~~~~~~ 245 (254)
T PRK14273 237 FFNPKNTKT 245 (254)
T ss_pred HhCCCChHH
Confidence 876554443
No 180
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.4e-42 Score=396.82 Aligned_cols=208 Identities=36% Similarity=0.572 Sum_probs=184.3
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH----hcccEEEccccccCc-
Q 000856 1025 VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL----RLKIGLVQQEPALFA- 1099 (1252)
Q Consensus 1025 ~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l----R~~i~~VpQd~~lf~- 1099 (1252)
.++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|++||.|+...+...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 358999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000856 1100 ASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLD 1173 (1252)
Q Consensus 1100 gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLD 1173 (1252)
.|++||+.++.. .. ..+++.++++.+++.++....| .+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987532 11 2356778888888876655544 479999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhcCCCchhHH
Q 000856 1174 EATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSR 1243 (1252)
Q Consensus 1174 EpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~ 1243 (1252)
||||+||+.+...+++.+.++. .++|+|+|||+++.+ +.||||++|++|++++.|+|+++++++...|.+
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 227 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVE 227 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHH
Confidence 9999999999999999998874 379999999999986 558999999999999999999999876555543
No 181
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.7e-42 Score=380.66 Aligned_cols=222 Identities=36% Similarity=0.576 Sum_probs=189.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CceEEECCcccCCC--CHH
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT-----AGKVMIDGKDIRRL--NLK 1082 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~-----~G~I~idG~di~~~--~~~ 1082 (1252)
++++||+++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCC--C-CC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKE--G-AT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
.+|++++|+||++.+|..|++||+.++.. . .+ ++++.++++..++.+++.. .++ .....|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD---RLH----DSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh---Hhh----CCcccCCHHHHH
Confidence 77889999999999999999999986421 1 11 2456777888888644321 122 234579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|++|||||+++|+++||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998876789999999999885 48999999999999999999998
Q ss_pred cCCCchh
Q 000856 1235 SRPDGAY 1241 (1252)
Q Consensus 1235 ~~~~g~y 1241 (1252)
..+...+
T Consensus 232 ~~~~~~~ 238 (247)
T TIGR00972 232 TNPKEKR 238 (247)
T ss_pred hCCCChH
Confidence 7544444
No 182
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-42 Score=385.86 Aligned_cols=213 Identities=33% Similarity=0.590 Sum_probs=188.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+||||+| .+|..|+++|+.++.. ..+ ++++.++++.+++.++....| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6788999999987521 122 345677888888876655544 36999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhh
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999875 4799999999999984 58999999999999999987653
No 183
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-42 Score=386.45 Aligned_cols=216 Identities=33% Similarity=0.561 Sum_probs=191.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-++++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.+
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999632 24699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+|+||++ .++..|++|||.++.. ..+ ++++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4678899999987521 122 244677788888877766554 36999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||+.+|+||||||||++||+.+...+++.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998763 7899999999999988999999999999999999988764
No 184
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-42 Score=378.20 Aligned_cols=213 Identities=36% Similarity=0.543 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 369999999999999999999999999999999999999999999999999876553 367899
Q ss_pred EEccccccCc-ccHHHHhccCCCC--C----C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKEG--A----T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~~--~----~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
|+||+|.+|. .|++||+.++... . . ++++.++++..++.++.... ..+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 9999999885 6999999875321 1 1 23455667777765544332 3479999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||+++|++|||||||++||+++...+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 789999999999875 489999999999999999999986
Q ss_pred CCC
Q 000856 1236 RPD 1238 (1252)
Q Consensus 1236 ~~~ 1238 (1252)
.+.
T Consensus 227 ~~~ 229 (239)
T cd03296 227 HPA 229 (239)
T ss_pred CCC
Confidence 533
No 185
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-42 Score=382.52 Aligned_cols=220 Identities=33% Similarity=0.567 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1081 (1252)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 359999999999999999999999999999999999975 689999999999865 345
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|++||+.++.. . ..++++.++++.+++.+++.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 1 123456777888887654432 12334567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+. .||+|++|++|+|++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999866789999999999985 5899999999999999999999
Q ss_pred hcCCC
Q 000856 1234 VSRPD 1238 (1252)
Q Consensus 1234 l~~~~ 1238 (1252)
.+.+.
T Consensus 236 ~~~~~ 240 (253)
T PRK14242 236 FTRPR 240 (253)
T ss_pred HcCCC
Confidence 86544
No 186
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6e-42 Score=375.58 Aligned_cols=219 Identities=51% Similarity=0.837 Sum_probs=194.8
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHh
Q 000856 361 VNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLR 440 (1252)
Q Consensus 361 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~ 440 (1252)
..+.++++|++++|++..+..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...++
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 34679999999999753234589999999999999999999999999999999999999999999999998777777777
Q ss_pred hhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 441 DQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+.++|++|++.+|+.|++||+.++.......+.........+.++++.+|.|+++.+++.+.+||||||||++|||||+.
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 88999999999998999999998754444444444445556778888998899988999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEE
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQV 579 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i 579 (1252)
+|+++||||||++||+.+++.+.+.++++.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998777999999999999988999999999874
No 187
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.2e-42 Score=395.48 Aligned_cols=217 Identities=35% Similarity=0.541 Sum_probs=190.0
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|++||.++...+. .+++++
T Consensus 3 L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 3 IEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 889999999963 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEccccccCc-ccHHHHhccCCC------CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE------GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~------~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
||+|++.+|. .|++||+.++.. ..+ ++++.++++..++.++....| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 9999999997 599999987632 112 345677788888866554433 469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|+|++.|+++++.+
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998763 789999999999875 489999999999999999999998
Q ss_pred CCCchhH
Q 000856 1236 RPDGAYS 1242 (1252)
Q Consensus 1236 ~~~g~y~ 1242 (1252)
++...|.
T Consensus 227 ~p~~~~~ 233 (353)
T PRK10851 227 EPATRFV 233 (353)
T ss_pred CccchHH
Confidence 7665553
No 188
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-42 Score=387.71 Aligned_cols=216 Identities=29% Similarity=0.541 Sum_probs=184.9
Q ss_pred EEEEeEEEECCCCCC--ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC----CCHHH
Q 000856 1010 IELRHVDFAYPSRPD--VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR----LNLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~----~~~~~ 1083 (1252)
|+++||+|+|+.... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999963211 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEcccc--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHcCch-hhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1084 LRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATE----AEVVEAARAANVH-GFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1084 lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~d----eei~~al~~~~l~-~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
+|++++||+|+| .+|..|+.+|+.++.. ..+. +++.++++.+++. ++.. .....||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWE-----------KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhcc-----------CCcccCCHHHH
Confidence 899999999998 7899999999987632 1222 3355666666763 2322 23457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
||++|||||+.+|++|||||||++||+.+...+.+.|+++. +++|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998875 4889999999999885 599999999999999999999
Q ss_pred hhcC
Q 000856 1233 LVSR 1236 (1252)
Q Consensus 1233 Ll~~ 1236 (1252)
+.++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 189
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.1e-42 Score=379.68 Aligned_cols=213 Identities=31% Similarity=0.556 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH-hccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL-RLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~i 1088 (1252)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 359999999999999999999999999999999999999999999999999988876654 5779
Q ss_pred EEEccccccCcc-cHHHHhccCCCCC------------C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKEGA------------T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~~~------------~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
+|+||++.+|.+ |++||+.++.... . .+.+.++++..++.+ ........|||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 146 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-----------LADRPAGELSY 146 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-----------hhhCChhhCCH
Confidence 999999999886 9999998653211 0 123344444444432 23334457999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~ 1229 (1252)
|||||++|||||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 147 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (236)
T cd03219 147 GQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGT 226 (236)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecC
Confidence 99999999999999999999999999999999999999999875 68899999999999865 89999999999999999
Q ss_pred hhhhhcC
Q 000856 1230 HSELVSR 1236 (1252)
Q Consensus 1230 ~~eLl~~ 1236 (1252)
+++++..
T Consensus 227 ~~~~~~~ 233 (236)
T cd03219 227 PDEVRNN 233 (236)
T ss_pred HHHhccC
Confidence 9998754
No 190
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-42 Score=381.33 Aligned_cols=224 Identities=33% Similarity=0.562 Sum_probs=191.5
Q ss_pred cccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--C
Q 000856 1007 RGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--L 1079 (1252)
Q Consensus 1007 ~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~ 1079 (1252)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 356999999999963 359999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhcccEEEccccccCcccHHHHhccCCC---CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1080 NLKSLRLKIGLVQQEPALFAASIFDNIAYGKE---GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1080 ~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~---~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
+...+|++++|+||++.+|+.|+++|+.++.. ..+ +++++++++.+++.+.+.. .......+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHH
Confidence 56678999999999999999999999986421 122 2456777888877543322 233445679999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChh
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999999877789999999999885 58999999999999999999
Q ss_pred hhhcCCCch
Q 000856 1232 ELVSRPDGA 1240 (1252)
Q Consensus 1232 eLl~~~~g~ 1240 (1252)
++.+.+...
T Consensus 241 ~~~~~~~~~ 249 (260)
T PRK10744 241 TIFTKPAKK 249 (260)
T ss_pred HHHhCCCcH
Confidence 998754333
No 191
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-42 Score=379.53 Aligned_cols=218 Identities=33% Similarity=0.527 Sum_probs=184.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH---HHHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL---RWLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 441 (1252)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 358999999999999999999999999999999999999999999999999877654 45678
Q ss_pred hceEEccCCCCchh-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 442 QIGLVNQEPALFAT-TILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~-tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
.++||+|++.+|+. |++||+.++.. ....++... .+.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 89999999999876 99999987532 112222211 112233333 55555667778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
|+.+|+++||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 228 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRASD 228 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCCC
Confidence 9999999999999999999999999999998753 7999999999999876 8999999999999999998876543
No 192
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.1e-42 Score=397.52 Aligned_cols=221 Identities=29% Similarity=0.513 Sum_probs=195.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+++
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 3899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccccc-CcccHHHHhccCCC----------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1089 GLVQQEPAL-FAASIFDNIAYGKE----------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1089 ~~VpQd~~l-f~gTIreNl~~~~~----------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
++|||++.+ |..|++||+.++.. ..+++.+.++++.+++.++... ++ ..||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-------~~----~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-------PV----TSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-------Ch----hhCCHHHHHHH
Confidence 999999987 68899999987531 1124567888999998776543 22 46999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhc
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|||+++|+++.+ +.||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 478999999999999 5589999999999999999999885
Q ss_pred CCCchhHHHH
Q 000856 1236 RPDGAYSRLL 1245 (1252)
Q Consensus 1236 ~~~g~y~~l~ 1245 (1252)
. ....+++
T Consensus 229 ~--~~l~~~~ 236 (402)
T PRK09536 229 A--DTLRAAF 236 (402)
T ss_pred c--HHHHHHh
Confidence 4 3444544
No 193
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-42 Score=384.21 Aligned_cols=217 Identities=33% Similarity=0.522 Sum_probs=190.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743234599999999999999999999999999999999999999999999999999887878889999
Q ss_pred EEEcccc--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEP--ALFAASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~--~lf~gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+|+||+| .++..|+.|||.++.. ..+.+ .+.++++.+++.++.... ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4778899999986421 22333 346777788877654432 246999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||+++|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999998864
No 194
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-42 Score=387.97 Aligned_cols=216 Identities=30% Similarity=0.478 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC----CHHH
Q 000856 1010 IELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL----NLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~----~~~~ 1083 (1252)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996322 13699999999999999999999999999999999999999999999999999653 3457
Q ss_pred HhcccEEEcccc--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCC-ccCCCCCCCChhHH
Q 000856 1084 LRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKT-PVGERGVQLSGGQK 1154 (1252)
Q Consensus 1084 lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt-~vge~G~~LSgGQr 1154 (1252)
+|++|+||||+| .+|..|++||+.++.. ..+.+ .+.++++.+++ ++ .......+||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~~LSgGq~ 151 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGF-----------SRDVMSQSPFQMSGGQM 151 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCC-----------ChhhhhCCcccCCHHHH
Confidence 899999999998 5888999999987532 22333 23344444444 32 12344568999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
||++|||||+.+|+||||||||++||+.+...+.+.|+++. .++|||+|||+++.+. .||||++|++|+|++.|+++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999874 4799999999999885 58999999999999999999
Q ss_pred hhhcC
Q 000856 1232 ELVSR 1236 (1252)
Q Consensus 1232 eLl~~ 1236 (1252)
+++++
T Consensus 232 ~~~~~ 236 (286)
T PRK13646 232 ELFKD 236 (286)
T ss_pred HHHhC
Confidence 98764
No 195
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.9e-42 Score=394.65 Aligned_cols=219 Identities=33% Similarity=0.538 Sum_probs=192.2
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC--ceEEECCcccCCCCHHHHh
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTA--GKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~--G~I~idG~di~~~~~~~lR 1085 (1252)
+.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++ |+|.+||.++.+.++ .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 57999999999963 359999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cccEEEccccccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1086 LKIGLVQQEPALFAA-SIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~g-TIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
++++||+|++.+|.. |++||+.++.. ..+ ++.+.++++..++.++....| ..||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999965 99999987532 122 245667788888877665554 479999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC---CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhh
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR---GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~---~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|||||+++|++|+||||||+||+.+...+++.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988753 689999999999875 58999999999999999999999
Q ss_pred cCCCchhH
Q 000856 1235 SRPDGAYS 1242 (1252)
Q Consensus 1235 ~~~~g~y~ 1242 (1252)
+++...|.
T Consensus 228 ~~p~~~~~ 235 (362)
T TIGR03258 228 DAPADGFA 235 (362)
T ss_pred hCcCcHHH
Confidence 88765553
No 196
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-42 Score=379.84 Aligned_cols=212 Identities=35% Similarity=0.579 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC---HHHHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN---LKSLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~---~~~lR~ 1086 (1252)
++++||+++|++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 146999999999999999999999999999999999999999999999999998876 456788
Q ss_pred ccEEEccccccCc-ccHHHHhccCCC--------------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1087 KIGLVQQEPALFA-ASIFDNIAYGKE--------------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~-gTIreNl~~~~~--------------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
+++|+||++.+|. .|+++|+.++.. ...++++.++++..++.+.. ...+..|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-----------YQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-----------CCCcccCCH
Confidence 9999999998886 699999976421 11233456666666665432 233457999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1228 (1252)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3799999999999987 58999999999999999
Q ss_pred Chhhhh
Q 000856 1229 SHSELV 1234 (1252)
Q Consensus 1229 ~~~eLl 1234 (1252)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 999874
No 197
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.3e-42 Score=375.27 Aligned_cols=211 Identities=27% Similarity=0.473 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++||+++|++. ..++|+|+||+|++||.+||+||||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999632 14699999999999999999999999999999999999999999999999998764 356788999
Q ss_pred EEccccccC-cccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALF-AASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf-~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+| ..|+++|+.++.. ..+ ++++.++++..++.+.. ++.+ ..||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NKRA----RTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hChh----hhCCHHHHHHHHHHHH
Confidence 999999988 6799999976321 112 23456677777765443 2333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
++++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998777999999999999865 899999999999999998875
No 198
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.2e-42 Score=374.92 Aligned_cols=203 Identities=34% Similarity=0.568 Sum_probs=176.3
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~ 1086 (1252)
|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 23599999999999999999999999999999999999999999999999999776543 4788
Q ss_pred ccEEEccccccCc-ccHHHHhccCCC------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1087 KIGLVQQEPALFA-ASIFDNIAYGKE------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~-gTIreNl~~~~~------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
+++|+||++.+|. .|++||+.++.. ...++++.++++..++.++....| ..||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 599999986411 112456778888888876655443 3699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRI 1224 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1224 (1252)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999865 899999999985
No 199
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=396.25 Aligned_cols=217 Identities=27% Similarity=0.430 Sum_probs=184.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.+.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24589999999999999999999999999999999999999999999999999877654 3689
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+||+|++.+|+. ||+||+.|+... ....+... .+.+.++.+ |++...++.+.+|||||||||+|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~ 151 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVR 151 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999965 999999987431 12122111 112333333 56666677778999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++.++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 152 EPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999998753 8999999999998865 899999999999999999998765
No 200
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-42 Score=376.66 Aligned_cols=216 Identities=37% Similarity=0.589 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1085 (1252)
|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996421 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cccEEEccccccCc-ccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1086 LKIGLVQQEPALFA-ASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~-gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
+.++|+||++.+|. .|++||+.++.. .. ..+++.++++..++.+..... ...||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAY-----------PAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 88999999999986 699999976421 11 234567777777776554433 2579999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLM-R-GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
||||++++|++|||||||++||+.+...+.+.|++.. + ++|+|++||+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999875 3 7899999999999865 89999999999999999998875
Q ss_pred C
Q 000856 1236 R 1236 (1252)
Q Consensus 1236 ~ 1236 (1252)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 201
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-42 Score=381.19 Aligned_cols=225 Identities=31% Similarity=0.478 Sum_probs=189.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccC--CCCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIR--RLNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~--~~~~ 1081 (1252)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999987 4556
Q ss_pred HHHhcccEEEccccccCcc-cHHHHhccCCC--C--CC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1082 KSLRLKIGLVQQEPALFAA-SIFDNIAYGKE--G--AT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~g-TIreNl~~~~~--~--~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
..+|++++|+||++.+|.+ |++||+.++.. . .. ++++.++++..++.+.+.. .+ ......||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~----~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD---RL----NDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh---hh----ccChhhCCHH
Confidence 6788999999999999975 99999986421 1 11 2346677777776544321 12 3344579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~ 1231 (1252)
||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998767999999999999764 8999999999999999999
Q ss_pred hhhcCCCchhHH
Q 000856 1232 ELVSRPDGAYSR 1243 (1252)
Q Consensus 1232 eLl~~~~g~y~~ 1243 (1252)
++++.+...|.+
T Consensus 234 ~~~~~~~~~~~~ 245 (253)
T PRK14267 234 KVFENPEHELTE 245 (253)
T ss_pred HHHhCCCcHHHH
Confidence 998654333433
No 202
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-41 Score=393.73 Aligned_cols=218 Identities=38% Similarity=0.602 Sum_probs=193.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 3589999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccccccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||+|++.+|.. |++|||.++.. ..+ ++++.++++..++.++....| ..||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999987632 122 345677888888887776655 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
||+++|++||||||||+||..+...+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|+|++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 789999999999875 589999999999999999999998876
Q ss_pred chhH
Q 000856 1239 GAYS 1242 (1252)
Q Consensus 1239 g~y~ 1242 (1252)
..|.
T Consensus 238 ~~~~ 241 (375)
T PRK09452 238 NLFV 241 (375)
T ss_pred cHHH
Confidence 5553
No 203
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1e-41 Score=390.11 Aligned_cols=224 Identities=27% Similarity=0.409 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCC----------CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC
Q 000856 1009 EIELRHVDFAYPSRP----------DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR 1078 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~----------~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~ 1078 (1252)
-++++|++++|+.+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HHhcccEEEcccc--ccC-cccHHHHhccCC----CCCCHH----HHHHHHHHcCchh-hHhhCCCcCCCccC
Q 000856 1079 LNLK---SLRLKIGLVQQEP--ALF-AASIFDNIAYGK----EGATEA----EVVEAARAANVHG-FVSALPNAYKTPVG 1143 (1252)
Q Consensus 1079 ~~~~---~lR~~i~~VpQd~--~lf-~gTIreNl~~~~----~~~~de----ei~~al~~~~l~~-~i~~lp~gldt~vg 1143 (1252)
++.. .+|++++||+|+| .++ ..|+.+|+.++. +..+.+ .+.++++.+++.+ ...
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~----------- 156 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLIN----------- 156 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhc-----------
Confidence 8754 3678999999998 466 579999986421 123333 3455666666632 222
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEe
Q 000856 1144 ERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQ 1220 (1252)
Q Consensus 1144 e~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~ 1220 (1252)
.....||||||||++|||||+.+|++||+||||++||..+...+.+.|+++.+ +.|+|+|||+++.+.. ||||+||+
T Consensus 157 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 157 RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 23357999999999999999999999999999999999999999999998753 7899999999999975 89999999
Q ss_pred CCEEEEecChhhhhcCCCchhHH
Q 000856 1221 DGRIVEQGSHSELVSRPDGAYSR 1243 (1252)
Q Consensus 1221 ~G~Ive~G~~~eLl~~~~g~y~~ 1243 (1252)
+|+|+|.|+++++++++...|.+
T Consensus 237 ~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 237 LGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CCEEEEEcCHHHHHcCCCCHHHH
Confidence 99999999999999876666765
No 204
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-42 Score=383.89 Aligned_cols=219 Identities=37% Similarity=0.588 Sum_probs=187.3
Q ss_pred EEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH----hc
Q 000856 1011 ELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL----RL 1086 (1252)
Q Consensus 1011 ~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l----R~ 1086 (1252)
.++|++++|.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777742 358999999999999999999999999999999999999999999999999987765543 46
Q ss_pred ccEEEccccccC-cccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1087 KIGLVQQEPALF-AASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1087 ~i~~VpQd~~lf-~gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
+++|+||++.+| ..|++||+.++.. .. .++++.++++.+++.++....| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 899999999888 4699999976421 11 2345677888888877665544 3699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||||+++|+||||||||++||+.+...+.+.|++.. .++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999875 3789999999999875 5899999999999999999999876
Q ss_pred CCchhHH
Q 000856 1237 PDGAYSR 1243 (1252)
Q Consensus 1237 ~~g~y~~ 1243 (1252)
+...|.+
T Consensus 252 ~~~~~~~ 258 (269)
T cd03294 252 PANDYVR 258 (269)
T ss_pred cCcHHHH
Confidence 5555544
No 205
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=378.33 Aligned_cols=226 Identities=33% Similarity=0.505 Sum_probs=193.3
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCCCCHHH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRRLNLKS 1083 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~~~~~~ 1083 (1252)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3599999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcccEEEccccccC-cccHHHHhccCCC--C------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1084 LRLKIGLVQQEPALF-AASIFDNIAYGKE--G------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1084 lR~~i~~VpQd~~lf-~gTIreNl~~~~~--~------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
+|++++|+||++.+| ..|++||+.++.. . ..++++.++++.+++.+.+. ..++..+ .+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~~----~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAPA----GKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCCc----ccCCHHHH
Confidence 999999999999754 6899999976421 1 11345678888888765432 2234444 46999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999885 5899999999999999999999
Q ss_pred hcCCCchhHHH
Q 000856 1234 VSRPDGAYSRL 1244 (1252)
Q Consensus 1234 l~~~~g~y~~l 1244 (1252)
.+.+...+.+.
T Consensus 233 ~~~~~~~~~~~ 243 (250)
T PRK14247 233 FTNPRHELTEK 243 (250)
T ss_pred HcCCccHHHHH
Confidence 87654445433
No 206
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-42 Score=394.19 Aligned_cols=216 Identities=30% Similarity=0.473 Sum_probs=184.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999963 3589999999999999999999999999999999999999999999999999876543 4689
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+||+|++.+|+. ||+||+.|+... ....+..+ .+.+.++.+ |+.....+.+.+|||||||||+|||||+.
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~ 153 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQ-----RVKEALELV--DLAGFEDRYVDQISGGQQQRVALARALIL 153 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999999976 999999987431 12222211 112233333 55555677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|++||||||||+||+.+++.+.+.|+++.+ |+|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 154 ~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 154 KPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999998853 8999999999999865 899999999999999999998765
No 207
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=380.26 Aligned_cols=223 Identities=33% Similarity=0.547 Sum_probs=190.9
Q ss_pred cccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--C
Q 000856 1007 RGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--L 1079 (1252)
Q Consensus 1007 ~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~ 1079 (1252)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 357999999999963 3699999999999999999999999999999999999975 89999999999865 3
Q ss_pred CHHHHhcccEEEccccccCcccHHHHhccCCC--C-----C-CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1080 NLKSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-----A-TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1080 ~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-----~-~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
+...+|++++|+||++.+|..|++||+.++.. . . .++++.++++.+++.+.+.. ........|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 56678899999999999998999999986421 1 1 13456778888887654321 12234457999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecCh
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~ 1230 (1252)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999998876789999999999985 4799999999999999999
Q ss_pred hhhhcCCCc
Q 000856 1231 SELVSRPDG 1239 (1252)
Q Consensus 1231 ~eLl~~~~g 1239 (1252)
++++..+..
T Consensus 247 ~~~~~~~~~ 255 (267)
T PRK14235 247 EKMFTNPDD 255 (267)
T ss_pred HHHHhCCCC
Confidence 999865433
No 208
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-41 Score=376.80 Aligned_cols=219 Identities=35% Similarity=0.563 Sum_probs=187.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999631 35999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchh--hHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHG--FVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~--~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.+ +. .....+||||||||++||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-----------~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFA-----------DRYPHELSGGQQQRVGVA 147 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHH-----------hcChhhCCHHHHHHHHHH
Confidence 9999999885 699999976421 112 234566666666643 22 233467999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
||++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.+.+
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 227 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSP 227 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999999999999998753 799999999999875 58999999999999999999997653
Q ss_pred Cchh
Q 000856 1238 DGAY 1241 (1252)
Q Consensus 1238 ~g~y 1241 (1252)
...+
T Consensus 228 ~~~~ 231 (242)
T cd03295 228 ANDF 231 (242)
T ss_pred CChH
Confidence 3333
No 209
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-42 Score=386.14 Aligned_cols=217 Identities=32% Similarity=0.512 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC----CCHHH
Q 000856 1010 IELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR----LNLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~----~~~~~ 1083 (1252)
++++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 1369999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEcccc--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1084 LRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1084 lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
.|++++||||+| .+|..|++||+.++.. ..+.+ .+.++++.+++.+.+ .+ .....|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~------~~----~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL------LA----RSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh------hh----CCcccCCHHHHH
Confidence 888999999998 6888999999987532 22332 345566666664221 12 234579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 789999999999885 589999999999999999999
Q ss_pred hhcC
Q 000856 1233 LVSR 1236 (1252)
Q Consensus 1233 Ll~~ 1236 (1252)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 210
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=8.9e-42 Score=373.50 Aligned_cols=213 Identities=28% Similarity=0.447 Sum_probs=179.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH-hccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL-RLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~i 1088 (1252)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.... |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776654 6789
Q ss_pred EEEccccccCcc-cHHHHhccCCCCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHH
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKEGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAV 1163 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARAL 1163 (1252)
+|+||++.+|.+ |+++|+.++..... .+++.++++.. ..++..+++ ....||||||||++||||+
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l~~~~~~----~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRLKERRKQ----LAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------HhhhhhhhC----chhhCCHHHHHHHHHHHHH
Confidence 999999999886 99999987533221 11222333332 112223333 3456999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhc
Q 000856 1164 LKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1164 l~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999999999999875 57899999999998755 89999999999999999988763
No 211
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-42 Score=362.74 Aligned_cols=217 Identities=36% Similarity=0.591 Sum_probs=190.8
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCc---ccCCCCHHHHh
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGK---DIRRLNLKSLR 1085 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~---di~~~~~~~lR 1085 (1252)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++... -.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hh
Confidence 3788899988863 35899999999999999999999999999999999999999999999999 7777443 34
Q ss_pred cccEEEccccccC-cccHHHHhccCCC--------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1086 LKIGLVQQEPALF-AASIFDNIAYGKE--------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf-~gTIreNl~~~~~--------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
++||+|+||..+| ..||++||+||.. ......+.+.|+.+++..+-+..| ..||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 6799999999887 6799999999852 123456677788888877766666 5799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhh
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-R-GRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~-~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
+||||||..+|++|+||||.++||+.-...+.+-|++.. + ++|+++|||+.+.+ +-||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999999998875 3 89999999999877 56899999999999999999999
Q ss_pred hcCCCchh
Q 000856 1234 VSRPDGAY 1241 (1252)
Q Consensus 1234 l~~~~g~y 1241 (1252)
...|++.|
T Consensus 226 ~~~P~s~f 233 (345)
T COG1118 226 YDHPASRF 233 (345)
T ss_pred hcCCCccc
Confidence 98887765
No 212
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-42 Score=372.46 Aligned_cols=203 Identities=39% Similarity=0.644 Sum_probs=175.0
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999999876543 567899
Q ss_pred EEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++....| .+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHH
Confidence 9999998885 699999986422 111 244667777777765544332 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
|+++|++|||||||++||+.+...+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999998754 8999999999998865
No 213
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.1e-41 Score=374.36 Aligned_cols=220 Identities=30% Similarity=0.457 Sum_probs=195.7
Q ss_pred ccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHh
Q 000856 1006 IRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1006 ~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1085 (1252)
..+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999852 3599999999999999999999999999999999999999999999998
Q ss_pred cccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHcc
Q 000856 1086 LKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLK 1165 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~ 1165 (1252)
+++|+||++.+|++|++||+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+..||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999987532 34456677788889999999999999999998899999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHH-HHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcCCCchhHHH
Q 000856 1166 NPAILLLDEATSALDAESECVLQEAL-ERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1166 ~p~ILiLDEpTS~LD~~te~~i~~~l-~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l 1244 (1252)
+|++|||||||++||+.+...+.+.+ ++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+. ...|.+.
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 99999999999999999999998754 555568999999999999988999999999999999999999864 4455544
Q ss_pred H
Q 000856 1245 L 1245 (1252)
Q Consensus 1245 ~ 1245 (1252)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 3
No 214
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=374.24 Aligned_cols=210 Identities=29% Similarity=0.461 Sum_probs=179.9
Q ss_pred cEEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---H
Q 000856 1009 EIELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---L 1084 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---l 1084 (1252)
-++++||+++|++.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999996421 146999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cccEEEccccccCcc-cHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1085 R-LKIGLVQQEPALFAA-SIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1085 R-~~i~~VpQd~~lf~g-TIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
| +.++|+||++.+|.. |++||+.++.. .. .++++.++++..++.++... ...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANH-----------RPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHH
Confidence 3 679999999998875 99999976311 11 22456677777776554332 235799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEEEecC
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~ 1229 (1252)
++||||++++|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999899999999999998775
No 215
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=383.67 Aligned_cols=215 Identities=28% Similarity=0.545 Sum_probs=186.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC--CCCHHHHhc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR--RLNLKSLRL 1086 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~--~~~~~~lR~ 1086 (1252)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999952 236999999999999999999999999999999999999999999999999984 344667889
Q ss_pred ccEEEcccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1087 KIGLVQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1087 ~i~~VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
+++|+||+| .+|+.|++||+.++.. ..+ ++.+.++++..++.++.. ....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKD-----------KPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------CCcccCCHHHHHHHH
Confidence 999999998 5788999999986421 122 234566777777765432 234579999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 799999999999986 599999999999999999999876
Q ss_pred C
Q 000856 1236 R 1236 (1252)
Q Consensus 1236 ~ 1236 (1252)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 216
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=384.95 Aligned_cols=216 Identities=25% Similarity=0.471 Sum_probs=183.9
Q ss_pred EEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC---------
Q 000856 1010 IELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR--------- 1078 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~--------- 1078 (1252)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999996431 1259999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhcccEEEcccc--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHcCch-hhHhhC
Q 000856 1079 ---------------LNLKSLRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATE----AEVVEAARAANVH-GFVSAL 1134 (1252)
Q Consensus 1079 ---------------~~~~~lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~d----eei~~al~~~~l~-~~i~~l 1134 (1252)
.+...+|++++||||+| .+|..|++|||.++.. ..+. +++.++++.+++. ++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-- 160 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ-- 160 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh--
Confidence 13457889999999986 6888999999987632 2232 3456677777764 3332
Q ss_pred CCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh-hc
Q 000856 1135 PNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTI-RG 1212 (1252)
Q Consensus 1135 p~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti-~~ 1212 (1252)
.....||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|||+|||+++.+ ..
T Consensus 161 ---------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 161 ---------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred ---------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 2345799999999999999999999999999999999999999999998875 489999999999987 55
Q ss_pred cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1213 VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1213 ~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||||++|++|++++.|+++++.++
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 899999999999999999998765
No 217
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=394.94 Aligned_cols=218 Identities=34% Similarity=0.540 Sum_probs=189.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.. ++++
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876653 5689
Q ss_pred EEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||||++.+|. .|++||+.++.. ..+ ++++.++++..++.++....| ..||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999987532 122 245677788888766554433 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPD 1238 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~ 1238 (1252)
||+++|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|+|++.|+++++.+.+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999988753 789999999999875 589999999999999999999988765
Q ss_pred chhH
Q 000856 1239 GAYS 1242 (1252)
Q Consensus 1239 g~y~ 1242 (1252)
..|-
T Consensus 227 ~~~~ 230 (369)
T PRK11000 227 NRFV 230 (369)
T ss_pred cHHH
Confidence 5543
No 218
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-41 Score=377.58 Aligned_cols=212 Identities=32% Similarity=0.554 Sum_probs=182.2
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH---HHHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL---KSLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~---~~lR~ 1086 (1252)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999961 2359999999999999999999999999999999999999999999999999887654 34688
Q ss_pred ccEEEccccccCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1087 KIGLVQQEPALFA-ASIFDNIAYGKEG--------------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~-gTIreNl~~~~~~--------------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
+++|+||++.+|. .|+++|+.++... ..++++.++++..++.++.. .....|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-----------QRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCH
Confidence 9999999998886 6999999764211 11234566677776654433 23457999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1228 (1252)
|||||++|||||+++|++|||||||++||+.+...+.+.|++.. .++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999874 3789999999999985 58999999999999999
Q ss_pred Chhhhh
Q 000856 1229 SHSELV 1234 (1252)
Q Consensus 1229 ~~~eLl 1234 (1252)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999873
No 219
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=383.00 Aligned_cols=221 Identities=31% Similarity=0.500 Sum_probs=186.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++.....+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224589999999999999999999999999999999999999999999999999877777788899
Q ss_pred eEEccCCC--CchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEPA--LFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~~--l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+||+|+|. ++..||+|||.++... .+.++.... +.+.++.+ |++....+.+.+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKER-----VNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 4566999999987422 122221111 12233333 5555566677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999998853 8999999999999977999999999999999999887654
No 220
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.3e-42 Score=394.22 Aligned_cols=217 Identities=31% Similarity=0.493 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999974 3489999999999999999999999999999999999999999999999999876653 5679
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+||+|++.+|+. ||+||+.|+.... ...+.. ..+.+.++.+ |++....+.+.+|||||||||+|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 9999999874321 112211 1223445555 67777788889999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
+|+++|||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++.++.
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999998753 8999999999999865 8999999999999999999998653
No 221
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.7e-41 Score=380.72 Aligned_cols=224 Identities=29% Similarity=0.496 Sum_probs=189.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHh
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLR 1085 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1085 (1252)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999953 3699999999999999999999999999999999999999999999999998876543 357
Q ss_pred cccEEEccccccCcc-cHHHHhccCCC---CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1086 LKIGLVQQEPALFAA-SIFDNIAYGKE---GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~g-TIreNl~~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
++++|+||++.+|.+ |++||+.++.. ..+. +.+.++++..++.+.... . ...||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKL-------M----PSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhC-------C----hhhCCHHHHHHH
Confidence 889999999999976 99999975321 1222 244556666666543322 2 246999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998865 8999999999999999999998
Q ss_pred cCCCchhHHHHH
Q 000856 1235 SRPDGAYSRLLQ 1246 (1252)
Q Consensus 1235 ~~~~g~y~~l~~ 1246 (1252)
+++...+..++.
T Consensus 233 ~~~~~~~~~~~~ 244 (269)
T PRK11831 233 ANPDPRVRQFLD 244 (269)
T ss_pred cCCcHHHHHHHH
Confidence 764445555554
No 222
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.3e-41 Score=373.13 Aligned_cols=212 Identities=29% Similarity=0.543 Sum_probs=181.9
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 36999999999999999999999999999999999999999999999999998776544 45899
Q ss_pred EEcccccc-CcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPAL-FAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~l-f~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+ +..|+++|+.++.. ..+ ++++.+.++..++.+. .......||||||||++||||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARA 146 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 99999987 57899999976421 122 2334455555554332 333445799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
++++|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999999999875 47899999999999988999999999999999999999864
No 223
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=378.19 Aligned_cols=223 Identities=35% Similarity=0.569 Sum_probs=189.2
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCCC--CH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRRL--NL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1081 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3599999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
..+|+.++|+||++.+|..|++||+.++.. ..+. +++.++++.+++.+.+. ..++++ ...|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLKSP----ALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----hhhCCHHHHH
Confidence 567889999999999999999999986421 1222 34566777777654321 223433 4579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988668999999999999855 8999999999999999999998
Q ss_pred cCCCchh
Q 000856 1235 SRPDGAY 1241 (1252)
Q Consensus 1235 ~~~~g~y 1241 (1252)
+++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 7654444
No 224
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.1e-41 Score=377.34 Aligned_cols=218 Identities=32% Similarity=0.521 Sum_probs=186.9
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC---------
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN--------- 1080 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~--------- 1080 (1252)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 36999999999999999999999999999999999999999999999999987553
Q ss_pred ----HHHHhcccEEEccccccCc-ccHHHHhccCC---CCC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCC
Q 000856 1081 ----LKSLRLKIGLVQQEPALFA-ASIFDNIAYGK---EGA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQ 1148 (1252)
Q Consensus 1081 ----~~~lR~~i~~VpQd~~lf~-gTIreNl~~~~---~~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~ 1148 (1252)
...+|+.++|++|++.+|. .|+++|+.++. ... .++++.++++..++.++.... ...
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----------PAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----------hhh
Confidence 2467889999999998885 79999998641 111 234566777777776554433 357
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEE
Q 000856 1149 LSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIV 1225 (1252)
Q Consensus 1149 LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Iv 1225 (1252)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 789999999999985 58999999999999
Q ss_pred EecChhhhhcCCCchh
Q 000856 1226 EQGSHSELVSRPDGAY 1241 (1252)
Q Consensus 1226 e~G~~~eLl~~~~g~y 1241 (1252)
+.|+++++.+.+...|
T Consensus 227 ~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 227 EQGKPDEIFRQPKEER 242 (252)
T ss_pred EeCCHHHHhcCCCcHH
Confidence 9999999987644334
No 225
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=380.03 Aligned_cols=216 Identities=31% Similarity=0.574 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999887878889999
Q ss_pred EEEcccc--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEP--ALFAASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~--~lf~gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+|+||+| .++..|++||+.++.. ..+.+ .+.++++..++.++....+ .+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP-----------QNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4567899999986421 12322 3556677777766554433 57999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||+++|++|||||||++||+.+.+.+++.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 4899999999999888999999999999999999988764
No 226
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=383.58 Aligned_cols=220 Identities=26% Similarity=0.507 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCCC--CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC----CCHHH
Q 000856 365 IEFKNVTFSYPSRPD--VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT----LQLRW 438 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 438 (1252)
|+++|++|+|+.... ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974321 258999999999999999999999999999999999999999999999999853 23456
Q ss_pred HhhhceEEccCC--CCchhcHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000856 439 LRDQIGLVNQEP--ALFATTILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 439 ~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~ 513 (1252)
+++.++||+|+| .+|..|+.||+.|+.... ..++... .+.+.++.+ |+. ...++.+.+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 788889999999874321 1222211 112333333 553 3456778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||+.+|+++||||||++||+.+++.+.+.++++. +|+|||++||+++.+.. ||+|++|++|+++++|+++++...
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999999999999875 48999999999999865 999999999999999999998653
No 227
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=377.27 Aligned_cols=224 Identities=31% Similarity=0.530 Sum_probs=188.7
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1081 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 369999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--CC-----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|+.++|++|++.+|+.|++||+.++.. .. .++++.++++..+++... +..++ ....+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~----~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNLD----RNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHhc----cChhhCCHHHH
Confidence 567889999999999999999999986421 11 123456667777764321 11223 34457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 899999999999999999999
Q ss_pred hcCCCchhH
Q 000856 1234 VSRPDGAYS 1242 (1252)
Q Consensus 1234 l~~~~g~y~ 1242 (1252)
...+...|.
T Consensus 234 ~~~~~~~~~ 242 (251)
T PRK14251 234 FIAPKKQIT 242 (251)
T ss_pred HhCCCCHHH
Confidence 876444444
No 228
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=382.35 Aligned_cols=220 Identities=30% Similarity=0.523 Sum_probs=184.6
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC--HHHHh
Q 000856 365 IEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ--LRWLR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~--~~~~~ 440 (1252)
|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997422 136999999999999999999999999999999999999999999999999987643 34677
Q ss_pred hhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCcc--ccccCCCCCCChHHHHHHHH
Q 000856 441 DQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYS--TQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 441 ~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~g~~LSgGqkqRv~l 514 (1252)
++|+||+|+| .+++.|++||+.++... ...++.... +.+.++.+ |+. +..++.+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 56788999999986321 222222211 12233333 554 45677889999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998853 8999999999999854 899999999999999999987653
No 229
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=340.75 Aligned_cols=219 Identities=32% Similarity=0.483 Sum_probs=186.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
+++.+++++|++ ...+++|+||+++.||+++|.||||+||||++++|++++.|++|.|++||.|... ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 688999999975 3458999999999999999999999999999999999999999999999999865 4556788999
Q ss_pred EEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 000856 445 LVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPK 523 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~ 523 (1252)
.++-+..++.. |++|||.|...-....+.....+.+ +..+.+ +++...+++..++|-|+||||+|||||.++|+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~---~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIA---ELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHH---HHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 99988888866 9999998742211111111122222 333333 56666777888999999999999999999999
Q ss_pred EEEEeCCCCCCChHhHHHHHHHHHHhcC-CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 524 ILLLDEATSALDAGSESIVQEALDRLMV-GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 524 illlDEpts~LD~~~~~~~~~~l~~~~~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+++||||||+||..+.+.+.+.+.+++. |++||+.||.+++++. ||+|+++++|+++..|+.+++.+.
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999975 9999999999999986 999999999999999999998665
No 230
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=381.26 Aligned_cols=217 Identities=30% Similarity=0.516 Sum_probs=190.0
Q ss_pred cEEEEeEEEECCCCC---CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC-HHHH
Q 000856 1009 EIELRHVDFAYPSRP---DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN-LKSL 1084 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~---~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~-~~~l 1084 (1252)
-++++|++++|++.. .+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999996421 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEccccc--cCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1085 RLKIGLVQQEPA--LFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1085 R~~i~~VpQd~~--lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++....| ..||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987521 112 355778888888877765544 4699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
++|||||+++|++|||||||++||+.+...+.+.|+++. .++|||++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 378999999999999889999999999999999999987
Q ss_pred cC
Q 000856 1235 SR 1236 (1252)
Q Consensus 1235 ~~ 1236 (1252)
++
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 231
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-41 Score=377.26 Aligned_cols=221 Identities=31% Similarity=0.512 Sum_probs=190.5
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~ 1080 (1252)
..|+++||+++|++ +++|+|+||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 36999999999953 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCCC--CC-----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
...+|+.++|+||++.+|.+|++||+.++.. .. .++++.++++..++.+.+.. ........|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHH
Confidence 6678899999999999999999999986421 11 23456677788877654432 2334556799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999877889999999999885 589999999999999999999
Q ss_pred hhcCCC
Q 000856 1233 LVSRPD 1238 (1252)
Q Consensus 1233 Ll~~~~ 1238 (1252)
+.+.+.
T Consensus 249 ~~~~~~ 254 (267)
T PRK14237 249 IFTNPK 254 (267)
T ss_pred HhcCCC
Confidence 986533
No 232
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=378.36 Aligned_cols=222 Identities=32% Similarity=0.552 Sum_probs=188.9
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCCCC--HH
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRRLN--LK 1082 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~~~--~~ 1082 (1252)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999953 369999999999999999999999999999999999986 47999999999987543 34
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCC--C------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKE--G------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
.+|++++|+||++.+|.+|+++|+.++.. . ..++++.++++..++.+++. +.+...+..||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 67889999999999999999999986411 1 12345667778877755322 122334567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999864 899999999999999999999
Q ss_pred hcCCCchh
Q 000856 1234 VSRPDGAY 1241 (1252)
Q Consensus 1234 l~~~~g~y 1241 (1252)
++.+...|
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 87655544
No 233
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-41 Score=367.09 Aligned_cols=199 Identities=28% Similarity=0.522 Sum_probs=174.3
Q ss_pred EEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000856 1011 ELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGL 1090 (1252)
Q Consensus 1011 ~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1090 (1252)
+++|++++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999631 369999999999999999999999999999999999999999999999998864 456788999
Q ss_pred Ecccc--ccCcccHHHHhccCCCC--CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1091 VQQEP--ALFAASIFDNIAYGKEG--ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1091 VpQd~--~lf~gTIreNl~~~~~~--~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
+||++ .+|..|++||+.++... ..++++.++++..++.++....| ..||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 46789999999875332 23457888899998877655443 36999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEE
Q 000856 1167 PAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIV 1225 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv 1225 (1252)
|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999864 8999999999985
No 234
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=376.51 Aligned_cols=224 Identities=33% Similarity=0.519 Sum_probs=189.9
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~ 1080 (1252)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 359999999999999999999999999999999999998 689999999999863 56
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCCC--CC---CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA---TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~---~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
...+|++++|+||++.+|..|++||+.++.. .. .++++.++++.+++.+.+. .........|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHHHH
Confidence 6778899999999999998999999987532 11 1345666777777654322 1223334579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeC-----------CE
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQD-----------GR 1223 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~-----------G~ 1223 (1252)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999999999999877789999999999885 5899999996 77
Q ss_pred EEEecChhhhhcCCCchh
Q 000856 1224 IVEQGSHSELVSRPDGAY 1241 (1252)
Q Consensus 1224 Ive~G~~~eLl~~~~g~y 1241 (1252)
+++.|++++++..+...|
T Consensus 242 ~~~~~~~~~~~~~~~~~~ 259 (269)
T PRK14259 242 LVEFNETKKIFNSPKQKA 259 (269)
T ss_pred EEEeCCHHHHHhCcCChH
Confidence 999999999987544333
No 235
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=367.52 Aligned_cols=203 Identities=26% Similarity=0.502 Sum_probs=177.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++||+++|++ .++++|+||+|++| ++||+|+||||||||+++|+|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 36999999999999 99999999999999999999999999999999999998776 67889999
Q ss_pred EEccccccCcc-cHHHHhccCC--CCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGK--EGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~--~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |++||+.+.. ...+ ++++.++++..++.++.+ +.+ ..||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------KKI----GSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------Cch----hhCCHHHHHHHHHHHH
Confidence 99999999876 9999997531 1111 345677788888765533 333 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1228 (1252)
++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .|||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999876799999999999986 48999999999998865
No 236
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.3e-41 Score=373.15 Aligned_cols=213 Identities=35% Similarity=0.580 Sum_probs=177.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhccc-----CCCCcEEEECCccccCCC--HH
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFY-----DPNAGHVLLDNVDIKTLQ--LR 437 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~-----~~~~G~i~~~g~~~~~~~--~~ 437 (1252)
|+++|++++|+++ ++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ..
T Consensus 1 i~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGDK---HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCCc---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 4789999999743 5899999999999999999999999999999999999 999999999999987765 45
Q ss_pred HHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHhhCCCCccccccCC--CCCCChHHHHHH
Q 000856 438 WLRDQIGLVNQEPALFATTILENILYGKPEA---TMAEVEAAASAANAHSFITLLPNGYSTQVGER--GVQLSGGQKQRI 512 (1252)
Q Consensus 438 ~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--g~~LSgGqkqRv 512 (1252)
.++++++|++|++.++..|++||+.++.... ..++..+ .+.+.++.+ |+.....+. +.+||||||||+
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 150 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDE-----RVEEALRKA--ALWDEVKDRLHALGLSGGQQQRL 150 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHH-----HHHHHHHHc--CCChHHhccCCcccCCHHHHHHH
Confidence 6778899999999988779999998753211 1111111 112223333 444434444 579999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHH
Q 000856 513 AIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEE 587 (1252)
Q Consensus 513 ~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 587 (1252)
+|||||+.+|+++||||||++||+.+++.+.+.|+++.+.+|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 151 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 151 CLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 9999999999999999999999999999999999998655899999999999865 89999999999999998765
No 237
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-41 Score=375.78 Aligned_cols=223 Identities=33% Similarity=0.532 Sum_probs=189.2
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhcc---CCC--CCceEEECCcccCCC--CH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERF---YDP--TAGKVMIDGKDIRRL--NL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl---~~p--~~G~I~idG~di~~~--~~ 1081 (1252)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 3599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|+++|+.++.. . ..++++.++++.+++.+.+.. .....+..||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHH
Confidence 677889999999999999999999976421 1 123456677777777554432 12344567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|||+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 5899999999999999999999
Q ss_pred hcCCCchh
Q 000856 1234 VSRPDGAY 1241 (1252)
Q Consensus 1234 l~~~~g~y 1241 (1252)
.+++...|
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14245 233 FTNPEKEA 240 (250)
T ss_pred hcCCCChH
Confidence 87644433
No 238
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=392.35 Aligned_cols=206 Identities=38% Similarity=0.625 Sum_probs=180.4
Q ss_pred cceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH----hcccEEEccccccCc-c
Q 000856 1026 VVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL----RLKIGLVQQEPALFA-A 1100 (1252)
Q Consensus 1026 ~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l----R~~i~~VpQd~~lf~-g 1100 (1252)
.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.|+.+.+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 468999999999986 5
Q ss_pred cHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000856 1101 SIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDE 1174 (1252)
Q Consensus 1101 TIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDE 1174 (1252)
|++||+.++.. ..+ ++++.++++.+++.++....| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999986521 112 345677888888877665544 4699999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCCCchhH
Q 000856 1175 ATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRPDGAYS 1242 (1252)
Q Consensus 1175 pTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~ 1242 (1252)
||++||+.+...+++.|++.. .++|+|+|||+++.+. .||+|++|++|+|++.|++++++.++...|.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHH
Confidence 999999999999999999874 4789999999999885 5899999999999999999999877555453
No 239
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=379.77 Aligned_cols=214 Identities=31% Similarity=0.529 Sum_probs=188.6
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEcccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1090 LVQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1090 ~VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
||||++ .+|..|+++|+.++.. ..+ ++.+.++++.+++.++....| ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 4788999999986421 222 234677788888876655443 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||+.+|++|||||||++||+.+...+.+.+++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 789999999999984 6899999999999999999999764
No 240
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=379.76 Aligned_cols=217 Identities=31% Similarity=0.549 Sum_probs=191.3
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCC---ceEEECCcccCCCCHHHH
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTA---GKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~---G~I~idG~di~~~~~~~l 1084 (1252)
+.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999632 2359999999999999999999999999999999999999998 899999999988777788
Q ss_pred hcccEEEcccc--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1085 RLKIGLVQQEP--ALFAASIFDNIAYGKE--GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1085 R~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
|++++||||+| .+++.|++|||.++.. ..+. +++.++++.+++.++....| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 89999999998 4678999999986522 2333 34677888888877655544 4799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhh
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|||++||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 78999999999999889999999999999999999887
Q ss_pred cC
Q 000856 1235 SR 1236 (1252)
Q Consensus 1235 ~~ 1236 (1252)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 54
No 241
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.9e-42 Score=392.06 Aligned_cols=205 Identities=33% Similarity=0.506 Sum_probs=177.5
Q ss_pred CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH----hhhceEEccCCCCchh
Q 000856 380 VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL----RDQIGLVNQEPALFAT 455 (1252)
Q Consensus 380 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~~ 455 (1252)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++...+...+ |++++||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999998888776 6789999999999975
Q ss_pred -cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 000856 456 -TILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATS 532 (1252)
Q Consensus 456 -tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts 532 (1252)
||+||+.++.... ..++..+ .+.+.++.+ |++...++.+.+|||||||||+|||||+.+|+|+|||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 9999999864321 1111111 112333333 66667788888999999999999999999999999999999
Q ss_pred CCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 533 ALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 533 ~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+||+.+++.+++.+.++. .++|+|+|||+++++.. ||+|++|++|++++.|++++++.+
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999999874 38999999999998755 899999999999999999998765
No 242
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-41 Score=375.18 Aligned_cols=221 Identities=31% Similarity=0.506 Sum_probs=185.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH-hhhc
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL-RDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 443 (1252)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 358999999999999999999999999999999999999999999999999887765543 5679
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCCCHHHH-------HHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEATMAEV-------EAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
+|++|++.++++ |++||+.++........+ ........+.+.++.+ |++...+..+.+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999876 999999876421110000 0001111234455555 777777888899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
|||+.+|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999999875 58999999999999866 89999999999999999888754
No 243
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=375.44 Aligned_cols=224 Identities=32% Similarity=0.507 Sum_probs=189.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD--P---TAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~--p---~~G~I~idG~di~~--~~~ 1081 (1252)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 359999999999999999999999999999999999997 3 59999999999864 445
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--C-CCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-ATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|.+|++||+.++.. . .++ +++.++++..++.+++.. ........||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHH
Confidence 678899999999999999999999976421 1 122 234556667776544321 12334457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||||++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877889999999999985 5899999999999999999999
Q ss_pred hcCCCchhH
Q 000856 1234 VSRPDGAYS 1242 (1252)
Q Consensus 1234 l~~~~g~y~ 1242 (1252)
++++...|.
T Consensus 242 ~~~~~~~~~ 250 (259)
T PRK14274 242 FSNPDDQRT 250 (259)
T ss_pred hhCCCCHHH
Confidence 876554443
No 244
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=384.63 Aligned_cols=226 Identities=27% Similarity=0.441 Sum_probs=190.0
Q ss_pred cEEEEeEEEECCCCC-------CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH
Q 000856 1009 EIELRHVDFAYPSRP-------DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~-------~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~ 1081 (1252)
-|+++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhcccEEEccccc--cCc-ccHHHHhccC---CCCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCC
Q 000856 1082 K---SLRLKIGLVQQEPA--LFA-ASIFDNIAYG---KEGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQ 1148 (1252)
Q Consensus 1082 ~---~lR~~i~~VpQd~~--lf~-gTIreNl~~~---~~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~ 1148 (1252)
. .+|++++||||||. ++. .|+.+|+... ..... .+.+.++++.+++.+ .+++... ..
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~~p----~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDRYP----HM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcCCC----cc
Confidence 3 56889999999994 444 4888888531 11112 345677788887742 1233333 46
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEE
Q 000856 1149 LSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIV 1225 (1252)
Q Consensus 1149 LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Iv 1225 (1252)
||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ ++|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999964 8999999999999
Q ss_pred EecChhhhhcCCCchhHHH
Q 000856 1226 EQGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1226 e~G~~~eLl~~~~g~y~~l 1244 (1252)
|.|+++++++++...|.+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EECCHHHHhcCCCCHHHHH
Confidence 9999999998766667653
No 245
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-41 Score=378.20 Aligned_cols=220 Identities=30% Similarity=0.499 Sum_probs=186.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1081 (1252)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999875 789999999999865 344
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|.+|+++|+.++.. . ..++.+.++++..++.+.+.. .......+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKD-------RLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHH-------HHhcCcccCCHHHH
Confidence 567889999999999999999999986421 1 112445667777766432211 12234457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|||++||+++.+. .||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999876789999999999875 5899999999999999999999
Q ss_pred hcCCC
Q 000856 1234 VSRPD 1238 (1252)
Q Consensus 1234 l~~~~ 1238 (1252)
..++.
T Consensus 251 ~~~~~ 255 (268)
T PRK14248 251 FTSPK 255 (268)
T ss_pred HhCCC
Confidence 87643
No 246
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-41 Score=370.89 Aligned_cols=204 Identities=35% Similarity=0.503 Sum_probs=174.2
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH----H
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS----L 1084 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~----l 1084 (1252)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996321 146999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcccEEEccccccCcc-cHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1085 RLKIGLVQQEPALFAA-SIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1085 R~~i~~VpQd~~lf~g-TIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
|++++|+||++.+|.+ |++||+.++.. .. .++++.++++..++.+.... ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNH-----------YPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhc-----------ChhhcCHHHHHHH
Confidence 6789999999999876 99999987422 11 13456667777776554433 2357999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEE
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRI 1224 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1224 (1252)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888899999999974
No 247
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.6e-41 Score=391.60 Aligned_cols=217 Identities=28% Similarity=0.469 Sum_probs=186.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCC--cEEEECCccccCCCHHHHh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNA--GHVLLDNVDIKTLQLRWLR 440 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~--G~i~~~g~~~~~~~~~~~~ 440 (1252)
+.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|+++...+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 56999999999974 358999999999999999999999999999999999999999 999999999876554 35
Q ss_pred hhceEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 441 DQIGLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
+.|+||+|++.+|+. ||+||+.|+... ....+... .+.+.++.+ |++...++.+.+|||||||||+||||
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARA 151 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARA 151 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHH
Confidence 679999999999976 999999986421 12222211 122334444 67667788888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC---CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV---GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~---~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+.+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++.++
T Consensus 152 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 152 IAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999866 899999999999999999999765
No 248
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.5e-41 Score=384.50 Aligned_cols=213 Identities=28% Similarity=0.512 Sum_probs=184.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|+++
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999997654 4578999
Q ss_pred EEEccccccCc-ccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+|+||++.+|. .|++||+.+... ..+.. .+.++++..++. +..+++++ +||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~----~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-------NKADAKVG----ELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-------hHhcCchh----hCCHHHHHHHHHHH
Confidence 99999999885 699999985321 12322 334555555543 34455554 69999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||+++|++|+|||||++||+.+...+++.|+++. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999975 47899999999999865 899999999999999999999754
No 249
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.6e-41 Score=368.49 Aligned_cols=207 Identities=26% Similarity=0.476 Sum_probs=177.9
Q ss_pred EEEEeEEEECCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1010 IELRHVDFAYPSRPD-VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
|+++||+++|++... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999964311 159999999999999999999999999999999999999999999999999875 456778999
Q ss_pred EEEccccccCcc-cHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+|+||++.+|.+ |++||+.+... .. .++++.++++..++.+.... ....||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999885 99999975321 11 23456677777777655433 33579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
|++++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999998765 8999999999998764
No 250
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-41 Score=377.52 Aligned_cols=223 Identities=33% Similarity=0.550 Sum_probs=191.0
Q ss_pred cccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--C
Q 000856 1007 RGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--L 1079 (1252)
Q Consensus 1007 ~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~ 1079 (1252)
.+.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3599999999999999999999999999999999999984 89999999999865 3
Q ss_pred CHHHHhcccEEEccccccCcccHHHHhccCCC--CC-C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1080 NLKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1080 ~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
+...+|++++|+||++.+|.+|++||+.++.. .. . ++++.++++.+++.+.+.. ..+..+..||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHH
Confidence 45678899999999999999999999986421 11 1 2446777777777654432 233445679999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChh
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
||||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999999999999877889999999999985 58999999999999999999
Q ss_pred hhhcCCCc
Q 000856 1232 ELVSRPDG 1239 (1252)
Q Consensus 1232 eLl~~~~g 1239 (1252)
++.+.+..
T Consensus 253 ~~~~~~~~ 260 (272)
T PRK14236 253 TLFTSPAK 260 (272)
T ss_pred HHhcCCCc
Confidence 99865433
No 251
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-41 Score=368.55 Aligned_cols=209 Identities=27% Similarity=0.509 Sum_probs=180.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999988753 356788999
Q ss_pred EEccccccCcc-cHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.. |+++|+.++.. .. .++++.++++..++.++.... + ..||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-------V----KTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-------h----hhCCHHHHHHHHHHHH
Confidence 99999988874 99999975311 11 234567778888886654433 2 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM-R-GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~-~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
++.+|++|||||||++||+.+...+.+.|++.. + ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999875 3 7899999999998865 899999999999999988764
No 252
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.7e-41 Score=362.19 Aligned_cols=200 Identities=36% Similarity=0.545 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCCC--ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1010 IELRHVDFAYPSRPD--VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
|+++||+++|++... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999964310 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1088 IGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1088 i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
++|+||+|.+|++|++||+.++. ..++++.+++++.+++.+++..+|.|+++.+.+.+..||+|||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGK-PFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCC-CcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999853 34566778888899999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHH-HHHHc-CCCeEEEEecCchhhhccCEEEEEeCCE
Q 000856 1168 AILLLDEATSALDAESECVLQEA-LERLM-RGRTTVLVAHRLSTIRGVDCIGVVQDGR 1223 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~-l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1223 (1252)
+++||||||++||+++...+.+. +++.. +++|||++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99999999999999999988874 56553 4689999999999998899999999985
No 253
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=391.03 Aligned_cols=220 Identities=38% Similarity=0.600 Sum_probs=186.9
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH---Hh
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW---LR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 440 (1252)
|+++|++++|++.. +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999997311 346999999999999999999999999999999999999999999999999998776543 46
Q ss_pred hhceEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 441 DQIGLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
++|+||+|++.+|+ .|++||+.++... ....+... .+.+.++.+ |+.......+.+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 78999999999886 5999999875321 12222111 123344444 66666677888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998853 8999999999999876 899999999999999999998765
No 254
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=378.03 Aligned_cols=221 Identities=28% Similarity=0.454 Sum_probs=191.3
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccccccCc-ccHHHHhccCCC----------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE----------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~----------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
+|+||++.++. .|+++|+.++.. ...++++.++++.+++.++....| ..||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 99999987665 499999986421 112346778888888866544433 36999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhh
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
+|||||+.+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 3799999999999985 58999999999999999999987
Q ss_pred cCCCchhHHHH
Q 000856 1235 SRPDGAYSRLL 1245 (1252)
Q Consensus 1235 ~~~~g~y~~l~ 1245 (1252)
.. ..+..++
T Consensus 237 ~~--~~~~~~~ 245 (265)
T PRK10575 237 RG--ETLEQIY 245 (265)
T ss_pred CH--HHHHHHh
Confidence 52 3344444
No 255
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5e-41 Score=375.16 Aligned_cols=218 Identities=29% Similarity=0.505 Sum_probs=186.6
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC--------
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL-------- 1079 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~-------- 1079 (1252)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 3699999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHHhcccEEEccccccCc-ccHHHHhccCC---CCC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCC
Q 000856 1080 -----NLKSLRLKIGLVQQEPALFA-ASIFDNIAYGK---EGA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERG 1146 (1252)
Q Consensus 1080 -----~~~~lR~~i~~VpQd~~lf~-gTIreNl~~~~---~~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G 1146 (1252)
....+|++++||||++.+|. .|++||+.++. ... .++++.++++..++.++.. ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 13467889999999999997 59999997531 111 1345666777777755431 2234
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000856 1147 VQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRI 1224 (1252)
Q Consensus 1147 ~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1224 (1252)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999999875 48999999999999975 899999999999
Q ss_pred EEecChhhhhcCCC
Q 000856 1225 VEQGSHSELVSRPD 1238 (1252)
Q Consensus 1225 ve~G~~~eLl~~~~ 1238 (1252)
++.|+++++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999986543
No 256
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=375.40 Aligned_cols=221 Identities=31% Similarity=0.496 Sum_probs=186.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCceEEECCcccCCC--CH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD--P---TAGKVMIDGKDIRRL--NL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~--p---~~G~I~idG~di~~~--~~ 1081 (1252)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 359999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCC---CCC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGK---EGA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~---~~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|+.++||||++.+|+.|++||+.++. +.. .++++.++++.+++.+.+.. ........||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHH
Confidence 56788999999999999999999998642 111 13445667777776543322 12334467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998876799999999999875 5899999999999999999999
Q ss_pred hcCCCc
Q 000856 1234 VSRPDG 1239 (1252)
Q Consensus 1234 l~~~~g 1239 (1252)
++.+..
T Consensus 235 ~~~~~~ 240 (252)
T PRK14239 235 FMNPKH 240 (252)
T ss_pred HhCCCC
Confidence 876443
No 257
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=377.64 Aligned_cols=214 Identities=30% Similarity=0.539 Sum_probs=186.3
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC-HHHHhccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN-LKSLRLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~-~~~lR~~i 1088 (1252)
++++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++...+ ...+++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999953 235999999999999999999999999999999999999999999999999998765 46778899
Q ss_pred EEEccccc--cCcccHHHHhccCCCC--CC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEPA--LFAASIFDNIAYGKEG--AT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~~--lf~gTIreNl~~~~~~--~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+|+||+|. ++..|+++|+.++... .+ ++++.++++..++.++.... ...||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRS-----------PKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------cccCCHHHHHHHHHH
Confidence 99999985 6778999999875321 22 34466667777776554332 347999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||+++|+||||||||++||+.+...+++.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998875 48999999999999988999999999999999999998754
No 258
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.8e-41 Score=365.30 Aligned_cols=203 Identities=27% Similarity=0.468 Sum_probs=179.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++||+++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999953 3699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccccccC-cccHHHHhccCC--CCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1090 LVQQEPALF-AASIFDNIAYGK--EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1090 ~VpQd~~lf-~gTIreNl~~~~--~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
|+||++.+| ..|++||+.++. ...+++++.++++..++.+..... ...||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 579999997642 123567788888999887665432 246999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1167 PAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 47899999999999864 8999999999998865
No 259
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-41 Score=389.40 Aligned_cols=220 Identities=33% Similarity=0.521 Sum_probs=191.2
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
..|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+.+|++|+|.+||.++.+.++ .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999953 359999999999999999999999999999999999999999999999999987764 4678
Q ss_pred cEEEccccccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1088 IGLVQQEPALFAA-SIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1088 i~~VpQd~~lf~g-TIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
++||+|++.+|.. |++||+.++.. ..+ .+++.++++..++.++.+..| ..||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999999965 99999997632 122 245667777778766554443 46999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
|||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+ ..||||++|++|++++.|+|+++..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998887764 378999999999987 458999999999999999999999887
Q ss_pred CchhHH
Q 000856 1238 DGAYSR 1243 (1252)
Q Consensus 1238 ~g~y~~ 1243 (1252)
...|..
T Consensus 242 ~~~~~a 247 (377)
T PRK11607 242 TTRYSA 247 (377)
T ss_pred ccHHHH
Confidence 765543
No 260
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-41 Score=373.79 Aligned_cols=225 Identities=29% Similarity=0.506 Sum_probs=189.8
Q ss_pred cccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCceEEECCcccCCC--
Q 000856 1007 RGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD--P---TAGKVMIDGKDIRRL-- 1079 (1252)
Q Consensus 1007 ~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~--p---~~G~I~idG~di~~~-- 1079 (1252)
++.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 356999999999963 359999999999999999999999999999999999986 4 689999999998653
Q ss_pred CHHHHhcccEEEccccccCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1080 NLKSLRLKIGLVQQEPALFA-ASIFDNIAYGKE--G-AT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1080 ~~~~lR~~i~~VpQd~~lf~-gTIreNl~~~~~--~-~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
+...+|++++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+++..+ .......|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCH
Confidence 44567899999999999887 699999986421 1 11 23456777777776544321 2234567999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecCh
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSH 1230 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~ 1230 (1252)
|||||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||++++|++|+|++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999999877789999999999985 5899999999999999999
Q ss_pred hhhhcCCCchh
Q 000856 1231 SELVSRPDGAY 1241 (1252)
Q Consensus 1231 ~eLl~~~~g~y 1241 (1252)
+++...+...|
T Consensus 232 ~~~~~~~~~~~ 242 (252)
T PRK14256 232 KKIFTTPEKKQ 242 (252)
T ss_pred HHHHhCCCcHH
Confidence 99987644433
No 261
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.6e-41 Score=391.17 Aligned_cols=217 Identities=31% Similarity=0.505 Sum_probs=184.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 35899999999974 3489999999999999999999999999999999999999999999999999776654 467
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
++||+|++.+|+. ||+|||.|+.... ...+... .+.+.++.+ |+.....+.+.+|||||||||+|||||+
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~ 160 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVV 160 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999976 9999999874311 1111111 112233333 5556667777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|++++++.+
T Consensus 161 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 161 NKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999998853 8999999999999865 899999999999999999998765
No 262
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-41 Score=374.56 Aligned_cols=227 Identities=33% Similarity=0.530 Sum_probs=191.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCCC--CH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRRL--NL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1081 (1252)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 3899999999963 3699999999999999999999999999999999999984 899999999998653 34
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC---CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE---GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~---~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|++||+.++.. .. .++++.++++..++.+.+.. .......+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHH
Confidence 567889999999999999999999986421 11 23346667777777654322 12344567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999999877899999999999875 5899999999999999999999
Q ss_pred hcCCCchhHHHH
Q 000856 1234 VSRPDGAYSRLL 1245 (1252)
Q Consensus 1234 l~~~~g~y~~l~ 1245 (1252)
.+++...|...+
T Consensus 233 ~~~~~~~~~~~~ 244 (250)
T PRK14262 233 VERPKNKLTEEY 244 (250)
T ss_pred HhCCCChHHHHH
Confidence 876444455443
No 263
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.4e-41 Score=371.35 Aligned_cols=212 Identities=26% Similarity=0.480 Sum_probs=180.5
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH-hccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL-RLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~i 1088 (1252)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 359999999999999999999999999999999999999999999999999988776553 5789
Q ss_pred EEEccccccCcc-cHHHHhccCCC--CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKE--GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~--~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+|+||++.+|.+ |++||+.++.. .... +++.++++..++.+ ........||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHHHH
Confidence 999999999986 99999986422 1121 23344455554433 233344679999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhc
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
|++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999999998875 4789999999998775 589999999999999999999875
No 264
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.5e-41 Score=372.71 Aligned_cols=212 Identities=24% Similarity=0.439 Sum_probs=183.6
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH-Hhccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS-LRLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~i 1088 (1252)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 36999999999999999999999999999999999999999999999999998877664 35679
Q ss_pred EEEccccccCcc-cHHHHhccCCCC--------------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKEG--------------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~~--------------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
+|+||++.+|.+ |++||+.++... ..++++.++++..++.+. .......|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADE-----------ADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHH
Confidence 999999999986 999999874210 012345555666555432 223345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999865 89999999999999999999
Q ss_pred hhc
Q 000856 1233 LVS 1235 (1252)
Q Consensus 1233 Ll~ 1235 (1252)
++.
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 875
No 265
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-41 Score=372.46 Aligned_cols=224 Identities=35% Similarity=0.598 Sum_probs=189.4
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~~ 1080 (1252)
+.|+++||+++|++ .++++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 3599999999999999999999999999999999999863 69999999999874 45
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCCC--CC-----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
...+|++++|+||++.+|+.|+++|+.++.. .. .++++.++++.+++.+.+.. ........|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHH
Confidence 5678899999999999999999999986421 11 23455666777776543321 1233445799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988678899999999998855 89999999999999999999
Q ss_pred hhcCCCchh
Q 000856 1233 LVSRPDGAY 1241 (1252)
Q Consensus 1233 Ll~~~~g~y 1241 (1252)
+...+...+
T Consensus 232 ~~~~~~~~~ 240 (250)
T PRK14240 232 LFTNPKDKR 240 (250)
T ss_pred HHhCCCChH
Confidence 986644443
No 266
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=380.68 Aligned_cols=220 Identities=34% Similarity=0.576 Sum_probs=186.1
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC----CHHH
Q 000856 365 IEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL----QLRW 438 (1252)
Q Consensus 365 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 438 (1252)
++++|++|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 23599999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhhhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccc-cccCCCCCCChHHHHHHH
Q 000856 439 LRDQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYST-QVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 439 ~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~LSgGqkqRv~ 513 (1252)
+|++|+||+|+| .+|..|++||+.++... .+.++... .+.+.+..+ |+++ ..+..+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999997 57888999999986422 12222221 123344444 7763 556788999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
|||||+.+|+++||||||++||+.++..+.+.++++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999884 48999999999999865 89999999999999999988765
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 267
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=376.35 Aligned_cols=216 Identities=30% Similarity=0.482 Sum_probs=188.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999642 23589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccccc--cCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEPA--LFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~~--lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+|+||+|. ++..|+++|+.++.. ... ++++.++++..++.++... ...+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADY-----------EPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHH
Confidence 99999984 556789999976522 112 2355667777777554332 2357999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||++++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999888999999999999999999998764
No 268
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=382.07 Aligned_cols=220 Identities=26% Similarity=0.485 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC---------
Q 000856 365 IEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT--------- 433 (1252)
Q Consensus 365 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--------- 433 (1252)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997432 1358999999999999999999999999999999999999999999999876532
Q ss_pred ---------------CCHHHHhhhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCcc
Q 000856 434 ---------------LQLRWLRDQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYS 494 (1252)
Q Consensus 434 ---------------~~~~~~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~ 494 (1252)
.+...+++.|+||+|+| .+|..||+|||.|+... ...++.... +.+.++.+ |++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCC
Confidence 13356778899999986 57788999999987432 222222211 12333443 664
Q ss_pred -ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEE
Q 000856 495 -TQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTV 571 (1252)
Q Consensus 495 -~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i 571 (1252)
...++.+.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|+++. .|+|||+|||+++.+.. ||||
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 45677888999999999999999999999999999999999999999999999885 48999999999998755 8999
Q ss_pred EEEeCCEEEEecChHHHHhc
Q 000856 572 AVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 572 ~~l~~G~i~~~g~~~~l~~~ 591 (1252)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999988654
No 269
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=381.42 Aligned_cols=220 Identities=31% Similarity=0.539 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC----CCHHH
Q 000856 365 IEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT----LQLRW 438 (1252)
Q Consensus 365 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~~~~~ 438 (1252)
++++|++|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997422 1459999999999999999999999999999999999999999999999999853 23456
Q ss_pred HhhhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000856 439 LRDQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 439 ~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~ 513 (1252)
+++.|+||+|+| .+++.||+||+.++... .+.++... .+.+.++.+ |+. ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 777899999998 57888999999986421 12222211 112333333 554 3346778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
|||||+.+|+++||||||++||+.++..+.+.|+++. .|.|||++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999999999885 38999999999999865 89999999999999999988865
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 4
No 270
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4e-41 Score=367.90 Aligned_cols=205 Identities=28% Similarity=0.488 Sum_probs=174.3
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---Hh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---LR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1085 (1252)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996321 136999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cccEEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1086 -LKIGLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1086 -~~i~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
++++|+||++.+|. .|++||+.++.. ... ++++.++++..++.+.... ....||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINH-----------RPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHH
Confidence 68999999999885 699999976311 111 2345666666666544332 2357999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEeCCEEE
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQDGRIV 1225 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~~G~Iv 1225 (1252)
+||||++++|+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999875 378999999999999889999999999986
No 271
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=388.80 Aligned_cols=215 Identities=33% Similarity=0.522 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .+++++
T Consensus 3 L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 3 IEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 789999999974 358999999999999999999999999999999999999999999999999876543 356799
Q ss_pred EEccCCCCchh-cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 445 LVNQEPALFAT-TILENILYGKPE------ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
||+|++.+|+. |++||+.|+... ....+... .+.+.++.+ |+.....+.+.+|||||||||+||||
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalArA 150 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALARA 150 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999987431 11111111 122334444 56556677888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 151 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 151 LAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999998853 7899999999999866 899999999999999999998765
No 272
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6e-41 Score=373.60 Aligned_cols=218 Identities=33% Similarity=0.519 Sum_probs=183.6
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC--------H
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN--------L 1081 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~--------~ 1081 (1252)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEccccccCc-ccHHHHhccCC---CCCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1082 KSLRLKIGLVQQEPALFA-ASIFDNIAYGK---EGATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~-gTIreNl~~~~---~~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
..+|++++||||++.+|. .|++||+.++. ..... +.+.++++..++.+.. ......|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-----------TSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----------hCChhhCChHH
Confidence 567889999999998885 69999997531 11222 2344555555554332 23345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~ 1231 (1252)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 47899999999999865 8999999999999999999
Q ss_pred hhhcCCCchh
Q 000856 1232 ELVSRPDGAY 1241 (1252)
Q Consensus 1232 eLl~~~~g~y 1241 (1252)
++.+.+.-.|
T Consensus 230 ~~~~~~~~~~ 239 (250)
T PRK11264 230 ALFADPQQPR 239 (250)
T ss_pred HHhcCCCCHH
Confidence 9876543333
No 273
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.3e-41 Score=370.31 Aligned_cols=213 Identities=31% Similarity=0.511 Sum_probs=183.0
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC--CHHHHhcc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL--NLKSLRLK 1087 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~--~~~~lR~~ 1087 (1252)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3599999999999999999999999999999999999999999999999998764 34567889
Q ss_pred cEEEccccccCc-ccHHHHhccCCC---CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGKE---GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~~---~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
++|+||++.+|. .|+++|+.++.. ..+ ++++.++++..++.+.... ....||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHH
Confidence 999999998885 699999986421 112 2334556666666544332 335799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||++++|++|+|||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999998875 47899999999999854 899999999999999999998765
No 274
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.4e-41 Score=366.21 Aligned_cols=203 Identities=35% Similarity=0.610 Sum_probs=175.3
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999963 3699999999999999999999999999999999999999999999999998766543 46899
Q ss_pred EEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++....| ..||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999885 699999986421 112 234566677777766544332 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
++++|++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999998865 8999999999999876
No 275
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.6e-41 Score=353.55 Aligned_cols=178 Identities=34% Similarity=0.642 Sum_probs=165.5
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++. +.++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|+.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999643 23599999999999999999999999999999999999999999999999988766 667889999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|+||++.+|+.|++||+ ...||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 346999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCEEEEec
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~G 1228 (1252)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998765
No 276
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=374.34 Aligned_cols=223 Identities=29% Similarity=0.510 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1081 (1252)
-++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999997 699999999999853 455
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--CCCH-----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--GATE-----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~~d-----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|++||+.++.. +.++ +.+.++++..++.+.+ .......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 1221 2234445555443222 2223345567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999864 899999999999999999999
Q ss_pred hcCCCchh
Q 000856 1234 VSRPDGAY 1241 (1252)
Q Consensus 1234 l~~~~g~y 1241 (1252)
.+.+...|
T Consensus 254 ~~~~~~~~ 261 (271)
T PRK14238 254 FSNPSDKR 261 (271)
T ss_pred HcCCCCHH
Confidence 87644333
No 277
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=375.79 Aligned_cols=221 Identities=33% Similarity=0.563 Sum_probs=188.5
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~ 1080 (1252)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.+ .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999963 359999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCC-----CCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGK-----EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~-----~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
...+|++++||||++.+|..|++||+.++. +...++++.++++..++...+... .......|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQ-------LDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHH-------HhCCcccCCHHHHH
Confidence 567889999999999999899999998642 111245677788888775433221 22344579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEE-EEeCCEEEEecChhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIG-VVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~-vl~~G~Ive~G~~~eL 1233 (1252)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998767899999999999865 89975 5799999999999999
Q ss_pred hcCCC
Q 000856 1234 VSRPD 1238 (1252)
Q Consensus 1234 l~~~~ 1238 (1252)
.+++.
T Consensus 268 ~~~~~ 272 (285)
T PRK14254 268 FENPE 272 (285)
T ss_pred HhCcC
Confidence 86533
No 278
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=372.44 Aligned_cols=217 Identities=31% Similarity=0.461 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC---CCCcEEEECCccccCCCHHHHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD---PNAGHVLLDNVDIKTLQLRWLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~---~~~G~i~~~g~~~~~~~~~~~~~ 441 (1252)
|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+...+++
T Consensus 3 ~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 3 AKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred eeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 789999999974 358999999999999999999999999999999999984 69999999999998877777888
Q ss_pred hceEEccCCCCchhcHHHHHhcCCCCCC--------HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 000856 442 QIGLVNQEPALFATTILENILYGKPEAT--------MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~tv~~ni~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~ 513 (1252)
.++|++|++.+|+.|++||+.++..... .+++...++..++.++ +.+...+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEE-------VKDKLKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChh-------hhHHhcCCcccCCHHHHHHHH
Confidence 9999999999998999999987531100 1112222222222111 123456678899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||+++|+++||||||++||+.++..+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999998778999999999999865 899999999999999999988653
No 279
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-41 Score=368.12 Aligned_cols=205 Identities=38% Similarity=0.570 Sum_probs=176.3
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
|+++|++++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996311 1469999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccccccCc-ccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+||||++.+|. .|++||+.++.. .. .++++.++++..++.++....| ..||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999887 799999976421 11 2345677788888766554433 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEe--CCEEEEecCh
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQ--DGRIVEQGSH 1230 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~--~G~Ive~G~~ 1230 (1252)
||+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 3789999999999875 589999999 7999998764
No 280
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=370.70 Aligned_cols=213 Identities=30% Similarity=0.484 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC------CCCHHH
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR------RLNLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~------~~~~~~ 1083 (1252)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcccEEEccccccCcc-cHHHHhccCC---CCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1084 LRLKIGLVQQEPALFAA-SIFDNIAYGK---EGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1084 lR~~i~~VpQd~~lf~g-TIreNl~~~~---~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
+|++++|+||++.+|.+ |++||+.++. .... .+++.++++..++.++.... ...|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRF-----------PLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHH
Confidence 78899999999999864 9999996421 1112 23345556666665544333 3579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
|++||||++++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 47999999999999864 899999999999999999988
Q ss_pred hcC
Q 000856 1234 VSR 1236 (1252)
Q Consensus 1234 l~~ 1236 (1252)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 654
No 281
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.2e-41 Score=386.41 Aligned_cols=210 Identities=31% Similarity=0.493 Sum_probs=181.0
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCc----ccCCCCHHHHh----cccEEEccccc
Q 000856 1025 VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGK----DIRRLNLKSLR----LKIGLVQQEPA 1096 (1252)
Q Consensus 1025 ~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~----di~~~~~~~lR----~~i~~VpQd~~ 1096 (1252)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+...+| ++++||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999995 67777665543 58999999999
Q ss_pred cCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1097 LFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1097 lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
+|+ .|++||+.++.. ..+ .+.+.++++.+++.++....| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 799999987531 122 245677888888876654433 46999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhcCCCchhHHHH
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l~ 1245 (1252)
||||||||+||+.+...+++.|.++.+ ++|+|+|||+++.+ +.||||++|++|++++.|++++++.++...|.+.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~ 264 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADF 264 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHHHH
Confidence 999999999999999999999998753 78999999999987 55899999999999999999999987666565443
No 282
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-41 Score=376.84 Aligned_cols=216 Identities=29% Similarity=0.526 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 23589999999999999999999999999999999999999999999999999877777888899
Q ss_pred eEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|++|+| .++..|++||+.++... ....+... .+.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 56778999999986321 11111111 112223333 4444456667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
.+|++|||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999885 48999999999999855 899999999999999998654
No 283
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.1e-40 Score=373.67 Aligned_cols=225 Identities=30% Similarity=0.440 Sum_probs=186.0
Q ss_pred EEEEeEEEECCCC------CCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH
Q 000856 1010 IELRHVDFAYPSR------PDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~ 1083 (1252)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1346999999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhcccEEEccccc--cC-cccHHHHhccCCC---C----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1084 ---LRLKIGLVQQEPA--LF-AASIFDNIAYGKE---G----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1084 ---lR~~i~~VpQd~~--lf-~gTIreNl~~~~~---~----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
+|+.++|+||++. ++ ..|++||+.++.. . ..++++.++++..++.+.. .......||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED----------ADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh----------hhCChhhCC
Confidence 6788999999983 44 4799999964211 1 1234556667776664211 123345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEe
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~ 1227 (1252)
||||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||++++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 789999999999986 4899999999999999
Q ss_pred cChhhhhcCCCchhHHH
Q 000856 1228 GSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~~l 1244 (1252)
|++++++...+..++++
T Consensus 233 g~~~~~~~~~~~~~~~~ 249 (265)
T TIGR02769 233 CDVAQLLSFKHPAGRNL 249 (265)
T ss_pred CCHHHHcCCCCHHHHHH
Confidence 99999987433334444
No 284
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=372.05 Aligned_cols=228 Identities=28% Similarity=0.507 Sum_probs=192.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCCC--CH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRRL--NL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1081 (1252)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.+||+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3599999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
...|+.++|+||++.+|+.|++||+.++.. . ..++.+.++++.+++.+.+. +.....+..||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHH
Confidence 677889999999999999999999987521 1 11234566666666644332 223445567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 999999999999999999999999999999999999998877789999999999986 5899999999999999999999
Q ss_pred hcCCCchhHHHHH
Q 000856 1234 VSRPDGAYSRLLQ 1246 (1252)
Q Consensus 1234 l~~~~g~y~~l~~ 1246 (1252)
.+++...+.+.+.
T Consensus 236 ~~~~~~~~~~~~~ 248 (253)
T PRK14261 236 FENPHEELTENYI 248 (253)
T ss_pred HhCCCcHHHHHHh
Confidence 8765444555443
No 285
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.2e-41 Score=382.61 Aligned_cols=218 Identities=27% Similarity=0.461 Sum_probs=183.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 35899999999963 45999999999999999999999999999999999999999999999999987644 356788
Q ss_pred ceEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 443 IGLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 443 i~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
||||||++.++. .|++||+.+.... ....+.... +.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999886 4999999853211 112222111 12233333 4444455666799999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|+++||||||++||+.+++.+++.|+++. +|+|+|++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999985 48999999999999976 899999999999999999998654
No 286
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-41 Score=373.17 Aligned_cols=222 Identities=26% Similarity=0.467 Sum_probs=191.7
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccccccCcc-cHHHHhccCCC----------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE----------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~----------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
|+||++.+|.+ |++||+.++.. ...++++.++++..++.++.... ...||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----------LTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----------cccCCHHHHHHHH
Confidence 99999998876 99999987521 11234566777777776544332 3469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||||++++|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~- 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT- 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC-
Confidence 9999999999999999999999999999999998875 4789999999999985 589999999999999999999875
Q ss_pred CCchhHHHHHH
Q 000856 1237 PDGAYSRLLQL 1247 (1252)
Q Consensus 1237 ~~g~y~~l~~~ 1247 (1252)
...+.+.+..
T Consensus 228 -~~~~~~~~~~ 237 (255)
T PRK11231 228 -PGLLRTVFDV 237 (255)
T ss_pred -HHHHHHHhCC
Confidence 3445555543
No 287
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-41 Score=371.66 Aligned_cols=221 Identities=35% Similarity=0.562 Sum_probs=182.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC---HHHHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ---LRWLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~---~~~~~~ 441 (1252)
++++|++++|++ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999964 135899999999999999999999999999999999999999999999999987765 445677
Q ss_pred hceEEccCCCCch-hcHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 442 QIGLVNQEPALFA-TTILENILYGKPEAT--MAEV---EAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~-~tv~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
.++|++|++.+|. .|++||+.++..... .... ........+.+.++.+ |+....+..+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 8999999998886 599999987532110 0000 0000111122344444 566666778889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
|||+.+|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999875 38999999999999985 8999999999999999988863
No 288
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-41 Score=369.80 Aligned_cols=204 Identities=32% Similarity=0.475 Sum_probs=179.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 35999999999999999999999999999999999999999999999998763 467889
Q ss_pred EEEccccccCc-ccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCC
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNP 1167 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p 1167 (1252)
+|+||++.+|. .|++||+.++.....++++.++++..++.++... ....||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 6999999875332235667788888887655433 23579999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChh
Q 000856 1168 AILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1168 ~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 3789999999999875 58999999999999988764
No 289
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-41 Score=373.32 Aligned_cols=222 Identities=31% Similarity=0.492 Sum_probs=189.0
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~~ 1080 (1252)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 35999999999963 3599999999999999999999999999999999999985 48999999999864 44
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCCC------CCC-HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGKE------GAT-EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~------~~~-deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
...+|++++|+||++.+|+.|++||+.++.. ... ++.+.++++.+++.+.+... + ...+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---L----NKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---h----cCCcccCCHHH
Confidence 5678889999999999999999999976421 111 23456777888876554322 2 23445799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEe-----CCEEEEe
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQ-----DGRIVEQ 1227 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~-----~G~Ive~ 1227 (1252)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998777999999999999865 79999997 5999999
Q ss_pred cChhhhhcCCCc
Q 000856 1228 GSHSELVSRPDG 1239 (1252)
Q Consensus 1228 G~~~eLl~~~~g 1239 (1252)
|+++++.+.+..
T Consensus 236 ~~~~~~~~~~~~ 247 (259)
T PRK14260 236 GVTTQIFSNPLD 247 (259)
T ss_pred CCHHHHhcCCCC
Confidence 999999875444
No 290
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.06 Aligned_cols=219 Identities=32% Similarity=0.527 Sum_probs=187.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCCC--CH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRRL--NL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1081 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--CC-C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|+++|+.++.. .. + ++++.++++.+++.+.+... .......||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 23456777777775433221 2234457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999998865 899999999999999999999
Q ss_pred hcCC
Q 000856 1234 VSRP 1237 (1252)
Q Consensus 1234 l~~~ 1237 (1252)
...+
T Consensus 234 ~~~~ 237 (251)
T PRK14270 234 FLEP 237 (251)
T ss_pred hcCC
Confidence 7653
No 291
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=382.01 Aligned_cols=227 Identities=25% Similarity=0.379 Sum_probs=187.1
Q ss_pred EEEEeEEEECCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC----CCCceEEECCcccCCCCHHHH
Q 000856 1010 IELRHVDFAYPSRPD-VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD----PTAGKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~----p~~G~I~idG~di~~~~~~~l 1084 (1252)
++++|++++|+.... .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999964321 359999999999999999999999999999999999998 489999999999998887665
Q ss_pred hc----ccEEEccccc--cCc-ccHHHH----hccCCC---CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1085 RL----KIGLVQQEPA--LFA-ASIFDN----IAYGKE---GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1085 R~----~i~~VpQd~~--lf~-gTIreN----l~~~~~---~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
|+ .++||||+|. ++. -|+.+| +..... ....+++.++++.+++.+.... .......||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhCC
Confidence 43 6999999995 332 355544 432111 1123557788888888643211 123345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEe
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~ 1227 (1252)
||||||++|||||+.+|++||+||||++||+.+...+++.|+++. .+.|+|+|||+++.+. .||||+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999999875 3789999999999985 5899999999999999
Q ss_pred cChhhhhcCCCchhHHH
Q 000856 1228 GSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~~l 1244 (1252)
|+++++++++...|.+.
T Consensus 236 g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQA 252 (326)
T ss_pred CCHHHHhhCCCChHHHH
Confidence 99999998777677643
No 292
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=372.25 Aligned_cols=221 Identities=32% Similarity=0.496 Sum_probs=188.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1081 (1252)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 369999999999999999999999999999999999986 479999999999853 455
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCCC--C---CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKEG--A---TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~--~---~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
..+|++++|+||++.+|+.|+++|+.++... . .++++.++++.+++.+++... ....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHH
Confidence 6788899999999999989999999875321 1 234456677777776554321 233456799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEe---------CCEEEE
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQ---------DGRIVE 1226 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~---------~G~Ive 1226 (1252)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|||++||+++.+. .||||++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999999877789999999999875 579999998 899999
Q ss_pred ecChhhhhcCCCc
Q 000856 1227 QGSHSELVSRPDG 1239 (1252)
Q Consensus 1227 ~G~~~eLl~~~~g 1239 (1252)
.|+++++.+.+..
T Consensus 240 ~~~~~~~~~~~~~ 252 (264)
T PRK14243 240 FDRTEKIFNSPQQ 252 (264)
T ss_pred eCCHHHHHhCCCc
Confidence 9999999876443
No 293
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=370.29 Aligned_cols=220 Identities=35% Similarity=0.603 Sum_probs=187.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT-----AGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~-----~G~I~idG~di~~--~~~ 1081 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 35999999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--CC-C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|+.++||||++.+|+.|++||+.++.. .. . ++.+.++++..++.+.+.. .....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986521 11 1 2334555666666554332 23445668999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999866 699999999999999999999
Q ss_pred hcCCC
Q 000856 1234 VSRPD 1238 (1252)
Q Consensus 1234 l~~~~ 1238 (1252)
...+.
T Consensus 234 ~~~~~ 238 (251)
T PRK14249 234 FSRPR 238 (251)
T ss_pred HhCCC
Confidence 76533
No 294
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.9e-41 Score=365.27 Aligned_cols=201 Identities=37% Similarity=0.598 Sum_probs=175.6
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~ 1086 (1252)
++++|++++|++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 23699999999999999999999999999999999999999999999999999877643 4688
Q ss_pred ccEEEccccccCc-ccHHHHhccCC------CCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1087 KIGLVQQEPALFA-ASIFDNIAYGK------EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~-gTIreNl~~~~------~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
.++|+||++.+|. .|++||+.++. +...+++++++++..++.++....| ..||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999885 69999998641 1122456778888888876554433 4699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCE
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGR 1223 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1223 (1252)
||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 48999999999999875 89999999985
No 295
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=377.01 Aligned_cols=217 Identities=29% Similarity=0.533 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC----CHH
Q 000856 1009 EIELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL----NLK 1082 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~----~~~ 1082 (1252)
.|+++|++++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 13699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcccEEEcccc--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHcCch-hhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1083 SLRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATE----AEVVEAARAANVH-GFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~d----eei~~al~~~~l~-~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
..|+.++|+||+| .+|..|++||+.++.. ..+. +.+.++++.+++. ++. ......|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLI-----------SKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-----------hCCcccCCHHH
Confidence 6788999999998 5788899999976421 2222 2345566666664 232 22345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHS 1231 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~ 1231 (1252)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++. ++.|||++||+++.+. .||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 4789999999999885 58999999999999999999
Q ss_pred hhhcC
Q 000856 1232 ELVSR 1236 (1252)
Q Consensus 1232 eLl~~ 1236 (1252)
++++.
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98754
No 296
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-41 Score=370.53 Aligned_cols=215 Identities=35% Similarity=0.542 Sum_probs=181.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999974 358999999999999999999999999999999999999999999999998865443 256799
Q ss_pred EEccCCCCch-hcHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 445 LVNQEPALFA-TTILENILYGKPEA------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 445 ~v~Q~~~l~~-~tv~~ni~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
|++|+|.++. .|++||+.++.... ...+.. ..+.+.++.+ |++......+.+||||||||++||||
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~a 150 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARA 150 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999999886 49999998763211 111111 1122344444 56656677788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+.+|+++||||||++||+++++.+.+.|.++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 151 LAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999998753 7899999999998865 899999999999999999887643
No 297
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.92 Aligned_cols=226 Identities=34% Similarity=0.525 Sum_probs=189.2
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCCC--C
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRRL--N 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~~--~ 1080 (1252)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35899999999963 359999999999999999999999999999999999865 4999999999998643 3
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCCC--CC-C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
...+|++++||||++.+|.+|++||+.++.. .. + ++++.++++..++.+.+. +.++ .....|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~----~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLD----KNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhh----CChhhCCHHH
Confidence 3467889999999999998999999986421 11 1 234556777777654322 1223 3345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||++|||||+++|++|||||||++||+++...+.+.|+++.+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988767899999999999864 89999999999999999999
Q ss_pred hhcCCCchhHH
Q 000856 1233 LVSRPDGAYSR 1243 (1252)
Q Consensus 1233 Ll~~~~g~y~~ 1243 (1252)
+.+++...|.+
T Consensus 268 ~~~~~~~~~~~ 278 (286)
T PRK14275 268 LFTNPKDRMTE 278 (286)
T ss_pred HHhCCCcHHHH
Confidence 98765444443
No 298
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1e-40 Score=382.16 Aligned_cols=228 Identities=27% Similarity=0.439 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC---CceEEECCcccCCCCHHHH
Q 000856 1009 EIELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT---AGKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~---~G~I~idG~di~~~~~~~l 1084 (1252)
-++++|++++|+.+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996321 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEccccc--cCc-ccHHHHhccC---CCCCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1085 R----LKIGLVQQEPA--LFA-ASIFDNIAYG---KEGATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1085 R----~~i~~VpQd~~--lf~-gTIreNl~~~---~~~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
| ++|+||||||. ++. .|+.+|+... ....+. +.+.++++.+++. ++. ..++.....||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~-------~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMP-------EAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-------ChH-HHhcCCcccCC
Confidence 3 47999999993 443 5777766421 111232 2345555655543 222 12344567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEe
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~ 1227 (1252)
||||||++|||||+.+|++||+|||||+||..+...+.+.|+++.+ +.|+|+|||+++.+. .||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 789999999999986 5899999999999999
Q ss_pred cChhhhhcCCCchhHHH
Q 000856 1228 GSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~~l 1244 (1252)
|+++++++++...|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 99999998877777653
No 299
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=368.43 Aligned_cols=216 Identities=37% Similarity=0.604 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4889999999964 3489999999999999999999999999999999999999999999999998877777778889
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
+|++|++.+|+.|++||+.++.......+ ..+.+.++.+ |+. ....+.+.+||||||||++||||++.+|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKN-------VDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHH-------HHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999998899999987642111110 1122333333 453 3456678899999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999875 38999999999999876 899999999999999999988654
No 300
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-41 Score=375.44 Aligned_cols=213 Identities=30% Similarity=0.476 Sum_probs=182.7
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccC--CCCHHHHhcc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIR--RLNLKSLRLK 1087 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~--~~~~~~lR~~ 1087 (1252)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 35999999999999999999999999999999999999999999999999985 3445678889
Q ss_pred cEEEccccc--cCcccHHHHhccCC--CCCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEPA--LFAASIFDNIAYGK--EGATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~~--lf~gTIreNl~~~~--~~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
++||||++. +|..|+.+|+.++. ...+. +++.++++..++.++.. ++ ...||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-------QP----IQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-------CC----chhCCHHHHHHHHH
Confidence 999999985 67789999997641 11222 33456777777755432 22 34699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||||+.+|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+. .||+|++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 4789999999999985 4899999999999999999998764
No 301
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6e-41 Score=363.72 Aligned_cols=201 Identities=40% Similarity=0.683 Sum_probs=173.6
Q ss_pred EEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000856 1011 ELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGL 1090 (1252)
Q Consensus 1011 ~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1090 (1252)
+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred Ecccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1091 VQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1091 VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
+||++ .++..|+++|+.++.. ..+ ++++.++++..++.++.... ...||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRS-----------PFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99998 3678899999986421 112 23456677777776554332 35799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCE
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGR 1223 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~ 1223 (1252)
|+++|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 47899999999999976 89999999985
No 302
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-41 Score=368.94 Aligned_cols=219 Identities=37% Similarity=0.581 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HHh
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WLR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 440 (1252)
|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997431 12589999999999999999999999999999999999999999999999998776543 346
Q ss_pred hhceEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 441 DQIGLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
+.++|++|++.+|. .|++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999987 5999999875321 1111111 1223445554 66666677788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-C-CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLM-V-GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++.+|+++||||||++||+.+++.+.+.|+++. + |+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999875 3 8999999999999866 89999999999999999887754
No 303
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.8e-41 Score=388.39 Aligned_cols=222 Identities=24% Similarity=0.404 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|+++...+...+++++
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999974 4599999999999999999999999999999999999999999999999999988888888899
Q ss_pred eEEccCCCCc-hhcHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALF-ATTILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~-~~tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+||+|++.++ +.|++||+.++.... ..... .......+.+.++.+ |+.....+...+||||||||++|||||++
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~-~~~~~~~v~~~le~v--gl~~~~~~~~~~LSgGerQRv~IArAL~~ 156 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTW-TETDRAAVERAMERT--GVAQFADRPVTSLSGGERQRVLLARALAQ 156 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCC-CHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 9999999874 669999999874211 00000 000001112233333 55555667788999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|++|||||||++||+.++..+++.|+++. +++|+|++||+++.+.. |||+++|++|++++.|++++++..
T Consensus 157 ~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 157 ATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 999999999999999999999999999985 58999999999999965 899999999999999999998754
No 304
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=367.63 Aligned_cols=214 Identities=25% Similarity=0.395 Sum_probs=180.3
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS-LRLK 1087 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1087 (1252)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred cEEEccccccCcc-cHHHHhccCCCCCCHH----HHHHHHHHc-CchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1088 IGLVQQEPALFAA-SIFDNIAYGKEGATEA----EVVEAARAA-NVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1088 i~~VpQd~~lf~g-TIreNl~~~~~~~~de----ei~~al~~~-~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
++|+||++.+|.+ |+++|+.++....+.+ ++.++++.. ++.+. .+. ....||||||||++|||
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-------~~~----~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHER-------RIQ----RAGTMSGGEQQMLAIGR 150 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHH-------HhC----chhhCCHHHHHHHHHHH
Confidence 9999999999984 9999998753212222 233333333 12211 122 34579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|++++|+||||||||++||+.+...+.+.|++.. +++|+|++||+++.+ ..||++++|++|++++.|+++++...
T Consensus 151 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 151 ALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999999999875 489999999999976 45899999999999999999999753
No 305
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.6e-41 Score=365.88 Aligned_cols=207 Identities=28% Similarity=0.484 Sum_probs=171.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 441 (1252)
++++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+++
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999642 23589999999999999999999999999999999999999999999999988765433 3677
Q ss_pred hceEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 442 QIGLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
+++|++|++.++.. |++||+.++... ...++.. ..+.+.++.+ |+.....+...+||||||||++|||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral 153 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDAN-----ERVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARAI 153 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 89999999998865 999999875211 1111111 1122333333 555555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEE
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQV 579 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i 579 (1252)
+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 48999999999999976 899999999974
No 306
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=377.40 Aligned_cols=220 Identities=30% Similarity=0.514 Sum_probs=182.0
Q ss_pred cccEEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC----C-
Q 000856 1007 RGEIELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR----L- 1079 (1252)
Q Consensus 1007 ~g~I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~----~- 1079 (1252)
.+.|+++|++++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999996432 1259999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHHhcccEEEcccc--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHcCchhhHhhCCCcCCCccCCCCCCCCh
Q 000856 1080 NLKSLRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATEAE----VVEAARAANVHGFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1080 ~~~~lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~dee----i~~al~~~~l~~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
+...+|++++|+||+| .+|..|++||+.++.. ....++ +.++++..++ |+++ .......|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~~---~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PEDY---VKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------ChhH---hcCChhhCCH
Confidence 4567888999999998 4678899999986421 123322 3334444444 2111 2233457999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1228 (1252)
|||||++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999875 3789999999999875 58999999999999999
Q ss_pred ChhhhhcC
Q 000856 1229 SHSELVSR 1236 (1252)
Q Consensus 1229 ~~~eLl~~ 1236 (1252)
+++++++.
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99888654
No 307
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.3e-41 Score=369.86 Aligned_cols=212 Identities=28% Similarity=0.463 Sum_probs=178.6
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH-Hhccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS-LRLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~i 1088 (1252)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999963 36999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccccccCcc-cHHHHhccCCCC--CCHHH-HHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1089 GLVQQEPALFAA-SIFDNIAYGKEG--ATEAE-VVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1089 ~~VpQd~~lf~g-TIreNl~~~~~~--~~dee-i~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
+|+||++.+|.. |+++|+.++... ..+++ ..++++..+. ++.........||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999976 999999865321 12222 2333333321 112223334579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
++|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998753 7899999999999975 8999999999999999999873
No 308
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.28 Aligned_cols=217 Identities=32% Similarity=0.538 Sum_probs=182.5
Q ss_pred EEEEeEEEECCCCC--CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC----CHHH
Q 000856 1010 IELRHVDFAYPSRP--DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL----NLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~----~~~~ 1083 (1252)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996421 13699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEcccc--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1084 LRLKIGLVQQEP--ALFAASIFDNIAYGKE--GATEAE----VVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1084 lR~~i~~VpQd~--~lf~gTIreNl~~~~~--~~~dee----i~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
+|++++|+||++ .+|+.|+++|+.++.. ..+.++ +.++++..++.+. ........|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHHH
Confidence 888999999998 6888999999986421 123332 3444555555321 112334579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
|++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999875 4789999999999885 4899999999999999999998
Q ss_pred hcC
Q 000856 1234 VSR 1236 (1252)
Q Consensus 1234 l~~ 1236 (1252)
++.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 309
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.4e-41 Score=364.03 Aligned_cols=202 Identities=33% Similarity=0.546 Sum_probs=174.4
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH---HHHhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL---KSLRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~---~~lR~ 1086 (1252)
++++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999632 359999999999999999999999999999999999999999999999999987654 34788
Q ss_pred ccEEEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1087 KIGLVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
.++||||++.+|. .|++||+.++.. ..+ ++++.++++..++.+.....| .+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHH
Confidence 9999999999887 599999986421 112 345667777777765544332 4699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRI 1224 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1224 (1252)
||||+++|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 57999999999999875 899999999974
No 310
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.1e-41 Score=364.69 Aligned_cols=198 Identities=31% Similarity=0.508 Sum_probs=170.6
Q ss_pred EEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEE
Q 000856 1011 ELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGL 1090 (1252)
Q Consensus 1011 ~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1090 (1252)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998874 46889999
Q ss_pred Ecccccc---CcccHHHHhccCCCC----------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1091 VQQEPAL---FAASIFDNIAYGKEG----------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1091 VpQd~~l---f~gTIreNl~~~~~~----------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
+||++.+ |..|++||+.++... ..++++.++++..++.++.... ..+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHH
Confidence 9999976 668999999865321 1234567788888887654432 246999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
+|||||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 67899999999999865 7999999986 55554
No 311
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=369.11 Aligned_cols=224 Identities=33% Similarity=0.559 Sum_probs=191.7
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1081 (1252)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||+++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 359999999999999999999999999999999999975 489999999999875 345
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC--CC-C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE--GA-T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~-~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|.+|+++|+.++.. .. + ++++.++++.+++.+++..+ ++ ..+..||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~~----~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---LD----KSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---Hh----CCcccCCHHHH
Confidence 678899999999999999999999986421 11 1 24466778888887665432 33 33457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|+|||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998865 699999999999999999999
Q ss_pred hcCCCchhH
Q 000856 1234 VSRPDGAYS 1242 (1252)
Q Consensus 1234 l~~~~g~y~ 1242 (1252)
...+.+.+.
T Consensus 233 ~~~~~~~~~ 241 (250)
T PRK14266 233 FINPKDKRT 241 (250)
T ss_pred HhCCCChHH
Confidence 876555543
No 312
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=387.06 Aligned_cols=218 Identities=32% Similarity=0.517 Sum_probs=185.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.+. .++.
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 358999999999999999999999999999999999999999999999999876654 4568
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
|+||+|++.+|+. ||+||+.|+... ....+..+ .+.+.++.+ |+.....+.+.+|||||||||+|||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999976 999999987431 12222211 122334444 5666667788899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
.+|++||||||||+||+.+++.+.+.|+++. .|.|+|++||+++++.. ||+|++|++|++++.|+++++..+.
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999998888764 38999999999999765 8999999999999999999987653
No 313
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-41 Score=365.09 Aligned_cols=207 Identities=37% Similarity=0.588 Sum_probs=173.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999964 358999999999999999999999999999999999999999999999998875442 356899
Q ss_pred EEccCCCCch-hcHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFA-TTILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~-~tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++. .|++||+.++.... ...+... .+.+.++.+ |++....+...+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 49999998753211 1111111 122344444 666666777789999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999874 38999999999999866 8999999999998765
No 314
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.1e-40 Score=369.94 Aligned_cols=220 Identities=32% Similarity=0.535 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH---HHHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL---RWLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 441 (1252)
++++|++++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2358999999999999999999999999999999999999999999999999876553 34677
Q ss_pred hceEEccCCCCch-hcHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 442 QIGLVNQEPALFA-TTILENILYGKPEAT--MAEV---EAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~-~tv~~ni~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
+++|++|++.++. .|++||+.++..... .... ........+.+.++.+ |+....+..+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 8999999998886 499999987642110 0000 0000111223344444 666666778889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
|||+.+|+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999999874 37999999999999865 899999999999999998876
No 315
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=369.39 Aligned_cols=213 Identities=27% Similarity=0.454 Sum_probs=186.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccccc-CcccHHHHhccCCCC------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPAL-FAASIFDNIAYGKEG------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~l-f~gTIreNl~~~~~~------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+ +..|++||+.++... ..++.+.++++..++.++.... ...||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRD-----------YPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99999977 678999999865321 1234567777877776544332 34799999999999999
Q ss_pred Hc------cCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1163 VL------KNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1163 Ll------~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
|+ ++|++|||||||++||+.+...+.+.|+++. .++|||++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 4789999999999886 5899999999999999999998
Q ss_pred hcC
Q 000856 1234 VSR 1236 (1252)
Q Consensus 1234 l~~ 1236 (1252)
.+.
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 753
No 316
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-41 Score=389.25 Aligned_cols=216 Identities=30% Similarity=0.488 Sum_probs=183.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 3899999999964 3589999999999999999999999999999999999999999999999998766543 4679
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+||+|++.+|+. ||+||+.++... ....+... .+.+.++.+ |++....+...+|||||||||+|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 999999986431 11111111 122334444 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|++|||||||++||+.+++.+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999998743 8999999999999866 899999999999999999998654
No 317
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=370.23 Aligned_cols=225 Identities=33% Similarity=0.561 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT-----AGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~-----~G~I~idG~di~~--~~~ 1081 (1252)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 36999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhcccEEEccccccCc-ccHHHHhccCCC--CC-CHHHH----HHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1082 KSLRLKIGLVQQEPALFA-ASIFDNIAYGKE--GA-TEAEV----VEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~-gTIreNl~~~~~--~~-~deei----~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
..+|+.++|+||++.+|. .|++||+.++.. .. .+++. .+.++..++.+.+ ++.++.++ .+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~~----~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTPA----TGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCCc----ccCCHHH
Confidence 577889999999999887 599999975421 11 23332 2334445444322 23344444 5699999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhh
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777999999999999875 89999999999999999999
Q ss_pred hhcCCCchhHH
Q 000856 1233 LVSRPDGAYSR 1243 (1252)
Q Consensus 1233 Ll~~~~g~y~~ 1243 (1252)
+++.+...+..
T Consensus 234 ~~~~~~~~~~~ 244 (252)
T PRK14272 234 LFTNPRDERTE 244 (252)
T ss_pred HHhCcCcHHHH
Confidence 98765554533
No 318
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2e-40 Score=365.40 Aligned_cols=211 Identities=37% Similarity=0.539 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .++|+|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999963 359999999999999999999999999999999999999999999999999986653 478899
Q ss_pred EEccccccCcc-cHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |++||+.++.. .. .++++.++++..++.++.... ..+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986432 11 234566777777776554432 24799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
++++|+++||||||++||++++..+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998653 7999999999998755 899999999999999999999864
No 319
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-41 Score=367.08 Aligned_cols=212 Identities=38% Similarity=0.607 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 478999999963 359999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccccccCcc-cHHHHhccCCC------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE------GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |+++|+.++.. ...++++.++++..++.++....| ..||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 99999985421 112456677788888877665544 4799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
++++|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 9999999999999999999999999999998753 7999999999999865 8999999999999999999998653
No 320
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=371.11 Aligned_cols=221 Identities=29% Similarity=0.484 Sum_probs=187.7
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCCCC-HH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRRLN-LK 1082 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~~~-~~ 1082 (1252)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 3699999999999999999999999999999999999986 6999999999987653 45
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCC---CCCHHHH----HHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKE---GATEAEV----VEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~---~~~deei----~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
.+|++++|+||++.+|..|+++|+.++.. ..++++. .++++..++.+.. ++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986521 1344443 3444555554322 12234455689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999865 8999999999999999999998
Q ss_pred cCCCc
Q 000856 1235 SRPDG 1239 (1252)
Q Consensus 1235 ~~~~g 1239 (1252)
+.+..
T Consensus 251 ~~~~~ 255 (276)
T PRK14271 251 SSPKH 255 (276)
T ss_pred hCcCc
Confidence 76433
No 321
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-41 Score=354.99 Aligned_cols=218 Identities=35% Similarity=0.520 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCC---------------------CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCc
Q 000856 364 NIEFKNVTFSYPSRP---------------------DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAG 422 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~---------------------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 422 (1252)
.|+++||++-|++++ -...++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588999999886422 12357899999999999999999999999999999999999999
Q ss_pred EEEECCccccCCCHHHHh----hhceEEccCCCCchh-cHHHHHhcCCCCCCH------HHHHHHHHHhcHHHHHhhCCC
Q 000856 423 HVLLDNVDIKTLQLRWLR----DQIGLVNQEPALFAT-TILENILYGKPEATM------AEVEAAASAANAHSFITLLPN 491 (1252)
Q Consensus 423 ~i~~~g~~~~~~~~~~~~----~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 491 (1252)
+|+++|.|+..++.+.+| +++++|||+..|++- ||.||..||.+-... ++..++++.+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~V----------- 152 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELV----------- 152 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHc-----------
Confidence 999999999998876543 479999999999876 999999999763321 2223333344
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-c
Q 000856 492 GYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-V 568 (1252)
Q Consensus 492 g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~ 568 (1252)
|++..-...+.+||||+||||.|||||..+|+|||+|||+|||||--+..+++.|.++. -.||+|+||||+++..+ .
T Consensus 153 gL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 153 GLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred CchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 55555555666999999999999999999999999999999999999999999998774 37999999999999866 6
Q ss_pred CEEEEEeCCEEEEecChHHHHhcc
Q 000856 569 DTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 569 d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
|||..|++|+|+..|+++|+..+.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCc
Confidence 999999999999999999998764
No 322
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.8e-40 Score=357.02 Aligned_cols=202 Identities=34% Similarity=0.572 Sum_probs=177.9
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
+.++++|++++|++. +.++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 469999999999742 2358999999999999999999999999999999999999999999999999887777778889
Q ss_pred ceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 443 IGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 443 i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
++||+|+|.++++|++||+.+... ...+++..++ + +++.+.+||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l---------~---------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGAL---------R---------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHh---------h---------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999976432 2222222211 1 34567899999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999999999999998877899999999999997799999999999998775
No 323
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.1e-40 Score=370.31 Aligned_cols=217 Identities=32% Similarity=0.504 Sum_probs=182.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----CcEEEECCccccCC--CHH
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN-----AGHVLLDNVDIKTL--QLR 437 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~~--~~~ 437 (1252)
++++|++++|++ ..+++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999974 34899999999999999999999999999999999999998 99999999998753 345
Q ss_pred HHhhhceEEccCCCCchhcHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCcc----ccccCCCCCCChHHHH
Q 000856 438 WLRDQIGLVNQEPALFATTILENILYGKPE---ATMAEVEAAASAANAHSFITLLPNGYS----TQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 438 ~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~g~~LSgGqkq 510 (1252)
.++++++|++|++.+++.|++||+.++... ....+... .+.+.++.+ |+. ...+..+.+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHH
Confidence 667889999999999889999999875321 11111111 112233333 443 4566778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
|++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999999865 8999999999999999998876
Q ss_pred hc
Q 000856 590 AK 591 (1252)
Q Consensus 590 ~~ 591 (1252)
..
T Consensus 232 ~~ 233 (247)
T TIGR00972 232 TN 233 (247)
T ss_pred hC
Confidence 43
No 324
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=370.90 Aligned_cols=224 Identities=31% Similarity=0.533 Sum_probs=190.8
Q ss_pred ccccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccC---
Q 000856 1006 IRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIR--- 1077 (1252)
Q Consensus 1006 ~~g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~--- 1077 (1252)
..+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.+||.++.
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3467999999999963 3699999999999999999999999999999999999975 7999999998874
Q ss_pred -CCCHHHHhcccEEEccccccCcccHHHHhccCCC--C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCC
Q 000856 1078 -RLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKE--G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQL 1149 (1252)
Q Consensus 1078 -~~~~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~L 1149 (1252)
......+|++++|+||++.+|.+|++||+.++.. . ..++++.++++.+++.+.+. .........|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccC
Confidence 3345678899999999999999999999986421 1 12456677777777654332 2233445679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 000856 1150 SGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1150 SgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1228 (1252)
|||||||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999877789999999999986 58999999999999999
Q ss_pred ChhhhhcCCCc
Q 000856 1229 SHSELVSRPDG 1239 (1252)
Q Consensus 1229 ~~~eLl~~~~g 1239 (1252)
+++++...+..
T Consensus 243 ~~~~~~~~~~~ 253 (265)
T PRK14252 243 ATDTIFIKPKN 253 (265)
T ss_pred CHHHHHhCCCC
Confidence 99999765433
No 325
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=374.05 Aligned_cols=220 Identities=31% Similarity=0.509 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 24599999999999999999999999999999999999999999999999999887777778889
Q ss_pred eEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|++|++ .+++.|++||+.++... ....+... .+.+.+..+ |+.........+||||||||++|||||+
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQV--GMEDFLNREPHRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 35567999999886321 12211111 112223332 5555566677799999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|+++||||||++||+.+++.+.+.|.++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998863 7999999999999988999999999999999999888654
No 326
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.3e-40 Score=379.63 Aligned_cols=213 Identities=28% Similarity=0.465 Sum_probs=181.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999998654 35678899
Q ss_pred EEEccccccCc-ccHHHHhccCC--CCCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGK--EGATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~--~~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+|+||++.+|. .|++||+.+.. ...+.+ .+.++++..++.+ .+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-------~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-------HhcCch----hhCCHHHHHHHHHHH
Confidence 99999998884 69999997421 122332 2334455555433 344444 369999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||+++|++|||||||++||+.+...+++.|++.. +++|||++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 4789999999999986 4899999999999999999999754
No 327
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-40 Score=364.61 Aligned_cols=216 Identities=31% Similarity=0.465 Sum_probs=179.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH-hhhc
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL-RDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~i 443 (1252)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 478999999964 358999999999999999999999999999999999999999999999999877766543 5679
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
+|++|++.++.. |++||+.++.......+... + +.+.++.++ +++...+..+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~--~---~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA--R---LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH--H---HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999998886 99999987643221111111 1 111222221 2334456677899999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999999875 58999999999999866 8999999999999999887764
No 328
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.5e-41 Score=365.45 Aligned_cols=215 Identities=25% Similarity=0.466 Sum_probs=179.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 4789999999642 145999999999999999999999999999999999999999999999999886543 55677899
Q ss_pred EEccCCCCch-hcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFA-TTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~-~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++. .|++||+.++.. .....+... .+.+.++.+ |+....+....+||||||||++||||++.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 9999999884 599999986421 111111111 122333333 454445666789999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999998777999999999999976 899999999999999988764
No 329
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=370.75 Aligned_cols=219 Identities=33% Similarity=0.521 Sum_probs=185.5
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1081 (1252)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHHhcccEEEccccccCc-ccHHHHhccCC---CCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1082 KSLRLKIGLVQQEPALFA-ASIFDNIAYGK---EGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~-gTIreNl~~~~---~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
..+|+.++|++|++.+|. .|+++|+.++. ...+ ++.+.++++..++.+.+.. .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHH
Confidence 678899999999999887 59999997542 1111 2345667777777543321 1223345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEe------CCEEEE
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQ------DGRIVE 1226 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~------~G~Ive 1226 (1252)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999998866789999999999985 589999996 899999
Q ss_pred ecChhhhhcCC
Q 000856 1227 QGSHSELVSRP 1237 (1252)
Q Consensus 1227 ~G~~~eLl~~~ 1237 (1252)
.|++++++..+
T Consensus 234 ~~~~~~~~~~~ 244 (258)
T PRK14241 234 IDDTEKIFSNP 244 (258)
T ss_pred cCCHHHHHhCc
Confidence 99999998653
No 330
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=371.41 Aligned_cols=214 Identities=29% Similarity=0.458 Sum_probs=188.2
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcc
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLK 1087 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1087 (1252)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999963 359999999999999999999999999999999999999999999999999988888888889
Q ss_pred cEEEccccccCc-ccHHHHhccCC-CC---------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGK-EG---------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~-~~---------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
++|+||++.+|. .|+++|+.++. +. ..++.+.++++..++.++... ....||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHH
Confidence 999999998874 69999998642 10 123456778888888665433 235799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhh
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
++||||++++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 789999999999875 4899999999999999999998
Q ss_pred hc
Q 000856 1234 VS 1235 (1252)
Q Consensus 1234 l~ 1235 (1252)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 75
No 331
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=368.07 Aligned_cols=221 Identities=35% Similarity=0.583 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccC-CCCHH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIR-RLNLK 1082 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~-~~~~~ 1082 (1252)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 3599999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhcccEEEccccccCcccHHHHhccCCC--CCC-----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHH
Q 000856 1083 SLRLKIGLVQQEPALFAASIFDNIAYGKE--GAT-----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~gTIreNl~~~~~--~~~-----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQ 1155 (1252)
.+|+.++|+||++.+|..|++||+.++.. ... ++++.++++.+++.+.+. +.++ .....|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~----~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK---DRLK----SHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh---HHhh----cCcccCCHHHHH
Confidence 78899999999999999999999986521 111 234456667777654432 1223 334579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhh
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1156 rlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|+|++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999875 8999999999999999999987
Q ss_pred cCCCc
Q 000856 1235 SRPDG 1239 (1252)
Q Consensus 1235 ~~~~g 1239 (1252)
.++..
T Consensus 233 ~~~~~ 237 (249)
T PRK14253 233 SNPKD 237 (249)
T ss_pred cCCCC
Confidence 65433
No 332
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.4e-40 Score=360.54 Aligned_cols=210 Identities=32% Similarity=0.477 Sum_probs=187.0
Q ss_pred EEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH----HHHhc
Q 000856 1011 ELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL----KSLRL 1086 (1252)
Q Consensus 1011 ~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~----~~lR~ 1086 (1252)
.+.|++|+|+.. .++++|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998876542 34567
Q ss_pred ccEEEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1087 KIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
.++|++|++.+|+.|++||+.++.+ .++++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999987643 356667888899999998998999999999888899999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHH--HHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCE
Q 000856 1167 PAILLLDEATSALDAESECVLQE--ALERLM-RGRTTVLVAHRLSTIRGVDCIGVVQDGR 1223 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~--~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1223 (1252)
|++|||||||++||+.+...+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999999888 455443 3689999999999998899999999984
No 333
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=374.23 Aligned_cols=214 Identities=34% Similarity=0.602 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC--CCHHHHhcc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR--LNLKSLRLK 1087 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~--~~~~~lR~~ 1087 (1252)
|+++||+++|+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2359999999999999999999999999999999999999999999999999852 334567899
Q ss_pred cEEEcccc--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEP--ALFAASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~--~lf~gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
++|+||++ .+|..|++||+.++.. ..+ .+++.++++..++.++... . ...|||||+||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-------~----~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENK-------P----PHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcC-------C----hhhCCHHHHHHHHH
Confidence 99999998 4788999999986421 122 2446677777777544332 2 34699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|||++.+|++|||||||++||+.+...+.+.|+++. +++|||++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 4789999999999986 5899999999999999999998764
No 334
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=369.25 Aligned_cols=217 Identities=33% Similarity=0.547 Sum_probs=183.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 35899999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccc--cccCCCCCCChHHHHHHHHHHHhc
Q 000856 445 LVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYST--QVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 445 ~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
|++|++.++. .|++||+.++... ....+. ...+.+.++.+ |+.. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999886 5999999875311 111111 11223444444 5553 567778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999999885 38999999999998765 89999999999999999888754
No 335
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=371.89 Aligned_cols=218 Identities=31% Similarity=0.518 Sum_probs=181.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 436 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 358999999999999999999999999999999999974 689999999998864 344
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPE--A-TM----AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~-~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
..++++++|++|++.+|+.|++||+.++... . .. +++...++..++.+. +....++.+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDE-------VKDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHH
Confidence 5677889999999999988999999875311 1 11 122222222222111 12345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 899999999999999999888
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 654
No 336
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2e-40 Score=370.17 Aligned_cols=212 Identities=27% Similarity=0.440 Sum_probs=185.8
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 36999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEccccc-cCcccHHHHhccCCCC----------CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHH
Q 000856 1090 LVQQEPA-LFAASIFDNIAYGKEG----------ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIA 1158 (1252)
Q Consensus 1090 ~VpQd~~-lf~gTIreNl~~~~~~----------~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrla 1158 (1252)
|+||++. .+..|+++|+.++... ..++++.++++..++.+.... ....||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHH
Confidence 9999985 5578999999765210 112356777777777654332 23469999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhc
Q 000856 1159 IARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1159 LARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~ 1235 (1252)
||||++.+|+++||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 3789999999999994 589999999999999999998864
No 337
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=368.14 Aligned_cols=224 Identities=31% Similarity=0.489 Sum_probs=192.0
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1081 (1252)
.+.+++++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999952 3699999999999999999999999999999999999987 79999999999864 344
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCC-----CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKE-----GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~-----~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
..+|++++|+||++.+|..|++||+.++.. ....+++.++++.+++.+.+... .++...+|||||+||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHH
Confidence 567889999999999999999999987521 11235678888888876554322 234556799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEe--------CCEEEEe
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQ--------DGRIVEQ 1227 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~--------~G~Ive~ 1227 (1252)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 9999999999999999999999999999999999999877789999999999885 489999996 8999999
Q ss_pred cChhhhhcCCCchhH
Q 000856 1228 GSHSELVSRPDGAYS 1242 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~ 1242 (1252)
|+++++++.+...+.
T Consensus 238 g~~~~~~~~~~~~~~ 252 (261)
T PRK14263 238 GPTAQIFQNPREQLT 252 (261)
T ss_pred CCHHHHHhCCCcHHH
Confidence 999999876443343
No 338
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.7e-40 Score=378.00 Aligned_cols=212 Identities=22% Similarity=0.437 Sum_probs=185.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999952 469999999999999999999999999999999999999999999999999876 4457889999
Q ss_pred EEccccccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |++||+.+... ..+ .+++.++++..++.++.. .....||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQH-----------KKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhc-----------CchhhCCHHHHHHHHHHHH
Confidence 99999999876 99999975321 112 344566666666654432 2335799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|+++|++|||||||++||+.+...+++.|+++.+++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999998865 899999999999999999998764
No 339
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=336.87 Aligned_cols=223 Identities=27% Similarity=0.451 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH-hhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL-RDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 442 (1252)
.+..+|+.++|.++ .+.+++||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|++..+.... |-.
T Consensus 4 ~L~a~~l~K~y~kr---~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYKKR---KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhCCe---eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 47899999999743 58999999999999999999999999999999999999999999999999999987654 447
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|||+||+|.+|.. ||+|||....+... .......+...+.+.++.+ ++.+.....+..||||||+|+.|||||+.+
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~-~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~ 157 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIRE-KDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAAN 157 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhh-cchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcC
Confidence 9999999999987 99999986543211 1111122222334445555 677888889999999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccch-hccCEEEEEeCCEEEEecChHHHHhcc
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTI-RNVDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
|+.++||||++++||.+...|++.++.++ +|..|++..|+..+. .-|||.|++.+|++..+|+++|+.++.
T Consensus 158 P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 158 PKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred CCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 99999999999999999999999999986 588999999999875 559999999999999999999997763
No 340
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.2e-40 Score=363.71 Aligned_cols=208 Identities=27% Similarity=0.444 Sum_probs=179.1
Q ss_pred cEEEEeEEEECCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---H
Q 000856 1009 EIELRHVDFAYPSRPD-VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---L 1084 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---l 1084 (1252)
-|+++|++++|++... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999964211 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcccEEEccccccCcc-cHHHHhccCC--CCC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1085 -RLKIGLVQQEPALFAA-SIFDNIAYGK--EGA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1085 -R~~i~~VpQd~~lf~g-TIreNl~~~~--~~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
+++++|+||++.+|.+ |++||+.++. ... ..+++.++++..++.++....| ..||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999998874 9999997531 111 2345677788888876655443 4699999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEecCchhhhccCEEEEEeCCEEEEe
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-R-GRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~-~~TvI~IaHrl~ti~~~DrI~vl~~G~Ive~ 1227 (1252)
++|||||+++|++|||||||++||+.+...+.+.|++.. + ++|||+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999874 2 7899999999999988999999999999864
No 341
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.7e-40 Score=370.61 Aligned_cols=229 Identities=26% Similarity=0.444 Sum_probs=190.2
Q ss_pred cEEEEeEEEECCCC------CCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH
Q 000856 1009 EIELRHVDFAYPSR------PDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK 1082 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~ 1082 (1252)
-|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999531 124699999999999999999999999999999999999999999999999999765666
Q ss_pred HHhcccEEEccccc--cCc-ccHHHHhccCC---CC----CCHHHHHHHHHHcCch-hhHhhCCCcCCCccCCCCCCCCh
Q 000856 1083 SLRLKIGLVQQEPA--LFA-ASIFDNIAYGK---EG----ATEAEVVEAARAANVH-GFVSALPNAYKTPVGERGVQLSG 1151 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~--lf~-gTIreNl~~~~---~~----~~deei~~al~~~~l~-~~i~~lp~gldt~vge~G~~LSg 1151 (1252)
..+++++|+||++. ++. -|+.+|+.+.. .. ..++++.++++.+++. +... .. ...|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-------YY----PHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-------cC----chhcCH
Confidence 66778999999985 343 38888886421 11 1234577788888874 3322 22 246999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1152 GQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1152 GQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999976 8999999999999999
Q ss_pred ChhhhhcCCC-chhHHHHHHh
Q 000856 1229 SHSELVSRPD-GAYSRLLQLQ 1248 (1252)
Q Consensus 1229 ~~~eLl~~~~-g~y~~l~~~q 1248 (1252)
+++++.+.+. ..+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 9999987643 3456677644
No 342
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=369.98 Aligned_cols=214 Identities=23% Similarity=0.436 Sum_probs=181.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHH-hcc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSL-RLK 1087 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~ 1087 (1252)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988776654 456
Q ss_pred cEEEccccccCcc-cHHHHhccCCCCC-----------------C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCC
Q 000856 1088 IGLVQQEPALFAA-SIFDNIAYGKEGA-----------------T----EAEVVEAARAANVHGFVSALPNAYKTPVGER 1145 (1252)
Q Consensus 1088 i~~VpQd~~lf~g-TIreNl~~~~~~~-----------------~----deei~~al~~~~l~~~i~~lp~gldt~vge~ 1145 (1252)
++|+||++.+|.+ |+++|+.++.... . .+.+.++++..++. ......
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~ 150 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-----------EHANRQ 150 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-----------hhhhCC
Confidence 9999999999985 9999998742100 0 11233344444443 333344
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCC
Q 000856 1146 GVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDG 1222 (1252)
Q Consensus 1146 G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G 1222 (1252)
..+||||||||++||||++.+|++|||||||++||+.+...+.+.|.+..+ ++|||++||+++.+.. ||+|++|++|
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 567999999999999999999999999999999999999999999998753 7899999999999855 8999999999
Q ss_pred EEEEecChhhhhcC
Q 000856 1223 RIVEQGSHSELVSR 1236 (1252)
Q Consensus 1223 ~Ive~G~~~eLl~~ 1236 (1252)
++++.|+++++.+.
T Consensus 231 ~i~~~~~~~~~~~~ 244 (255)
T PRK11300 231 TPLANGTPEEIRNN 244 (255)
T ss_pred eEEecCCHHHHhhC
Confidence 99999999998754
No 343
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-40 Score=367.29 Aligned_cols=216 Identities=29% Similarity=0.447 Sum_probs=183.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhhc
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 443 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999964 35899999999999999999999999999999999999999999999999987766544 34679
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+|++|++.+++. |++||+.++.+.. ...+.. ..+.+.++.+ |++....+.+.+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999998886 9999998753211 111111 1223445554 67766778888999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
+|++|||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 48999999999988766 89999999999999999888754
No 344
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.7e-39 Score=408.72 Aligned_cols=109 Identities=32% Similarity=0.492 Sum_probs=95.6
Q ss_pred cCCC-ccCCCCCCCChhHHHHHHHHHHHccCC---CEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh
Q 000856 1137 AYKT-PVGERGVQLSGGQKQRIAIARAVLKNP---AILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR 1211 (1252)
Q Consensus 1137 gldt-~vge~G~~LSgGQrQrlaLARALl~~p---~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~ 1211 (1252)
|++. .++.....||||||||++|||+|+++| +++||||||++||+.+...+.+.|+++. +|.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 4543 356667789999999999999999999 9999999999999999999999999875 5889999999999999
Q ss_pred ccCEEEEE------eCCEEEEecChhhhhcCCCchhHHHH
Q 000856 1212 GVDCIGVV------QDGRIVEQGSHSELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1212 ~~DrI~vl------~~G~Ive~G~~~eLl~~~~g~y~~l~ 1245 (1252)
.||+|++| ++|+|++.|+++++.+.+++.-.+.+
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~t~~~l 937 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRYL 937 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccHHHHHH
Confidence 99999999 79999999999999987555433443
No 345
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=380.12 Aligned_cols=227 Identities=24% Similarity=0.374 Sum_probs=189.0
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC----CCCceEEECCcccCCCCHHHH
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD----PTAGKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~----p~~G~I~idG~di~~~~~~~l 1084 (1252)
++++|++++|+... ...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||+++.+++...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 79999999996321 2469999999999999999999999999999999999986 589999999999998887665
Q ss_pred h----cccEEEcccccc--C-cccHHHHhccC---C---C----C--CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCC
Q 000856 1085 R----LKIGLVQQEPAL--F-AASIFDNIAYG---K---E----G--ATEAEVVEAARAANVHGFVSALPNAYKTPVGER 1145 (1252)
Q Consensus 1085 R----~~i~~VpQd~~l--f-~gTIreNl~~~---~---~----~--~~deei~~al~~~~l~~~i~~lp~gldt~vge~ 1145 (1252)
+ ++|+||||+|.. + ..|+.+|+... . . . ..++++.++++.+++.+.-.. + ...
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----~----~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDA----M----RSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHH----H----hCC
Confidence 3 479999999963 2 35888888531 0 0 0 113467788888888643111 1 122
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCC
Q 000856 1146 GVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDG 1222 (1252)
Q Consensus 1146 G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G 1222 (1252)
...||||||||++|||||+.+|+||||||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||||+||++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 357999999999999999999999999999999999999999999998753 7899999999999965 8999999999
Q ss_pred EEEEecChhhhhcCCCchhHHH
Q 000856 1223 RIVEQGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1223 ~Ive~G~~~eLl~~~~g~y~~l 1244 (1252)
+|+|.|+++++++++...|.+.
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHH
Confidence 9999999999998766678653
No 346
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.8e-40 Score=366.03 Aligned_cols=216 Identities=28% Similarity=0.487 Sum_probs=184.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 35899999999999999999999999999999999999999999999999987665543 35799
Q ss_pred EEccCCCCc-hhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALF-ATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~-~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++ ..|++||+.++... ....+.. ..+.+.++.+ |++...++.+.+||||||||++|||||+.+
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999875 56999999865321 1111111 1223445554 677777888889999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999885 48999999999999988999999999999999999888654
No 347
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=365.25 Aligned_cols=214 Identities=29% Similarity=0.470 Sum_probs=179.9
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH---H
Q 000856 364 NIEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW---L 439 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 439 (1252)
.++++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997422 146899999999999999999999999999999999999999999999999998776543 3
Q ss_pred h-hhceEEccCCCCchh-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 440 R-DQIGLVNQEPALFAT-TILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 440 ~-~~i~~v~Q~~~l~~~-tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
+ +.++|++|++.+++. |++||+.++.. .....+... .+.+.++.+ |++....+.+.+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 579999999988876 99999987421 111111111 122344444 666667778889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCCEEEEecC
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 584 (1252)
||++.+|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 4899999999999998889999999999998775
No 348
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-40 Score=380.60 Aligned_cols=213 Identities=28% Similarity=0.472 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|+++
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 35999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred EEEccccccC-cccHHHHhccCCC--CCCHH----HHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALF-AASIFDNIAYGKE--GATEA----EVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf-~gTIreNl~~~~~--~~~de----ei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
+|+||++.+| ..|++||+.+... ..+.+ .+.++++.+++ ++..++.++ +||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~~~~~~~----~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADARVS----DLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chhhCCChh----hCCHHHHHHHHHHH
Confidence 9999999886 5799999975321 12222 23344454444 334455554 69999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||+++|++|||||||++||+.+...+++.|+++. +++|||++||+++.+.. ||+|++|++|+|++.|+++++.++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 48999999999999864 899999999999999999999764
No 349
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=374.86 Aligned_cols=219 Identities=27% Similarity=0.489 Sum_probs=184.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCcccc--CCCHHHHhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIK--TLQLRWLRD 441 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~~~ 441 (1252)
.|+++|++++|++ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+++
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 235899999999999999999999999999999999999999999999999984 234556788
Q ss_pred hceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 442 QIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 442 ~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
.++|++|++ .+++.|++||+.++... ...++.... +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 56788999999875321 122221111 12233333 55556677888999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+.+|++|||||||++||+.++..+.+.|+++.+ |+|+|++||+++.+.. |||+++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998853 8999999999999974 999999999999999999988654
No 350
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-40 Score=339.75 Aligned_cols=221 Identities=30% Similarity=0.460 Sum_probs=191.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 442 (1252)
.++++|++..|+. ..+|+++||++++||+++|+|+||+|||||+|+|+|+.+|.+|+|.++|+|++..++.. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4789999999974 45999999999999999999999999999999999999999999999999999998765 5667
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|+||||.-.+|+. ||+||+..|......++.. ....++..+.+|. +....+.++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999977 9999999874322211111 1113344556664 77778889999999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
|++|+|||||.+|-|.-.+.|.+.|+++++ +.||++|.++...... +||.|||++|+|+.+|+.+|+..+.
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 999999999999999999999999999974 6799999999999865 8999999999999999999997653
No 351
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-40 Score=358.83 Aligned_cols=201 Identities=31% Similarity=0.536 Sum_probs=175.5
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ .. .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 578999999963 22 39999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccccccCcc-cHHHHhccCCC-C-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE-G-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~-~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |++||+.++.. . .+++++.++++..++.++....| ..||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999875 99999986532 1 23456788888888876665544 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
++++|++|||||||++||+++...+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999865 8999999999998764
No 352
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=369.31 Aligned_cols=222 Identities=28% Similarity=0.501 Sum_probs=189.6
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC-----CceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT-----AGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~-----~G~I~idG~di~~--~~ 1080 (1252)
+.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 25999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCC------CCCC-HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhH
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGK------EGAT-EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQ 1153 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~------~~~~-deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQ 1153 (1252)
...+|+.++|+||++.+|..|++||+.++. +... ++.+.++++..++.+++..+ .......|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHH
Confidence 567889999999999999999999998641 1111 23466777888876654422 234456799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-ccCEEEEEeC-----CEEE
Q 000856 1154 KQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIR-GVDCIGVVQD-----GRIV 1225 (1252)
Q Consensus 1154 rQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrI~vl~~-----G~Iv 1225 (1252)
|||++|||||+++|++|||||||++||+++...+.+.|+++. .++|+|+|||+++.+. .||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 4899999999999986 5799999999 9999
Q ss_pred EecChhhhhcCCCc
Q 000856 1226 EQGSHSELVSRPDG 1239 (1252)
Q Consensus 1226 e~G~~~eLl~~~~g 1239 (1252)
+.|+++++.+.+..
T Consensus 236 ~~~~~~~~~~~~~~ 249 (261)
T PRK14258 236 EFGLTKKIFNSPHD 249 (261)
T ss_pred EeCCHHHHHhCCCC
Confidence 99999999876544
No 353
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=369.37 Aligned_cols=218 Identities=29% Similarity=0.446 Sum_probs=181.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5899999999964 3489999999999999999999999999999999999997 48999999998753 234
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CH----HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TM----AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
..++++++|++|++.+++.|++||+.++.... .. +++..+++..++.+ ++.......+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWN-------EVKDKLNTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCch-------hhHHHHhCCcccCCHHHH
Confidence 56778899999999998889999998763211 11 12222222222211 112234556789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. |||+++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999866 899999999999999999988
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
..+
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 653
No 354
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2e-40 Score=346.76 Aligned_cols=172 Identities=42% Similarity=0.712 Sum_probs=162.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++. ..++++|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999642 235999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|++|++.+|++|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEeCCEE
Q 000856 1170 LLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRGVDCIGVVQDGRI 1224 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1224 (1252)
|||||||++||+.+...+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 47899999999999988999999999974
No 355
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.3e-40 Score=361.81 Aligned_cols=210 Identities=25% Similarity=0.456 Sum_probs=181.3
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-|+++||+++|++ .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccccccCcccHHHHhccCC---CC-CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1089 GLVQQEPALFAASIFDNIAYGK---EG-ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1089 ~~VpQd~~lf~gTIreNl~~~~---~~-~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
+|+||++.+|+.|++||+.++. .. ..++++.++++..++.+. ........||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDT----------ILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChH----------HhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997531 11 123445566666666421 122334579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhccCEEEEEe-CCEEEEecChh
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRGVDCIGVVQ-DGRIVEQGSHS 1231 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~~DrI~vl~-~G~Ive~G~~~ 1231 (1252)
++|+++||||||++||+.+...+.+.|++.. .++|+|++||+++.+..||+|++|+ |+..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999999875 3789999999999998899999995 66667889885
No 356
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8.1e-41 Score=364.65 Aligned_cols=208 Identities=35% Similarity=0.504 Sum_probs=174.3
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH----HH
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR----WL 439 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~----~~ 439 (1252)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14589999999999999999999999999999999999999999999999998776532 24
Q ss_pred hhhceEEccCCCCchh-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 440 RDQIGLVNQEPALFAT-TILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 440 ~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
+++++|++|++.+|.. |++||+.++.... ...+. ...+.+.++.+ |++....+.+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5679999999998876 9999998753211 11111 11223445554 6666667788899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEE
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQV 579 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i 579 (1252)
||+.+|+++||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998854 8999999999999887899999999974
No 357
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.8e-40 Score=361.15 Aligned_cols=204 Identities=32% Similarity=0.507 Sum_probs=175.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH---Hhc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS---LRL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~---lR~ 1086 (1252)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999942 236999999999999999999999999999999999999999999999999998776543 688
Q ss_pred ccEEEcccccc-CcccHHHHhccCC--CCCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1087 KIGLVQQEPAL-FAASIFDNIAYGK--EGATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1087 ~i~~VpQd~~l-f~gTIreNl~~~~--~~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
.++|+||++.+ +..|++||+.++. ...++ +++.++++..++.+..... ...||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHH
Confidence 99999999986 5679999998642 12232 2355677777776554432 35799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVE 1226 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive 1226 (1252)
|||++++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 47899999999999875 79999999999863
No 358
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=364.44 Aligned_cols=213 Identities=26% Similarity=0.452 Sum_probs=181.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH-Hhccc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS-LRLKI 1088 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~i 1088 (1252)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 889999999963 36999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEccccccCc-ccHHHHhccCCC---CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGKE---GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIA 1160 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLA 1160 (1252)
+|+||++.+|. .|++||+.++.. ..+. +.+.+.++..++. .........||||||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIE-----------HLRDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCH-----------HHhhcchhhCCHHHHHHHHHH
Confidence 99999999887 599999986421 1122 2234444444443 223344567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1161 RAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1161 RALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||++++|++|||||||++||+.+...+.+.+++.. +++|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999999998865 4889999999998774 5899999999999999999998753
No 359
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-40 Score=362.23 Aligned_cols=209 Identities=33% Similarity=0.532 Sum_probs=184.0
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++||+++|+. . ..|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 689999999962 2 249999999999999999999999999999999999999999999999886654 357899
Q ss_pred EEccccccCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGK-EG-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~-~~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |++||+.++. +. ..++++.++++..++.+++...| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999998642 11 12456788899999887766554 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
++++|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999865 899999999999999999999865
No 360
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-40 Score=362.89 Aligned_cols=211 Identities=33% Similarity=0.598 Sum_probs=184.9
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
|+++|++++|++ ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 478999999952 37999999999999999999999999999999999999999999999999987654 368899
Q ss_pred EEccccccCc-ccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
++||++.+|. .|++||+.++.. .. .++++.++++..++.+++...+ ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999885 799999986421 11 2345677788888876655443 4699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
++++|++|+|||||++||+.+.+.+.+.|++... ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999999998753 8999999999999865 8999999999999999999998764
No 361
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.4e-40 Score=362.71 Aligned_cols=211 Identities=27% Similarity=0.442 Sum_probs=177.0
Q ss_pred EEEEeEEEECCCCCC-CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 365 IEFKNVTFSYPSRPD-VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
++++|++++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ....+++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999975311 259999999999999999999999999999999999999999999999998875 345667889
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+|++|++.+|.. |++||+.+.... ....+... .+.+.++.+ |++....+.+.+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999885 999999764211 11111111 122344444 66666777888999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999885 48999999999999866 8999999999998754
No 362
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=363.09 Aligned_cols=213 Identities=27% Similarity=0.443 Sum_probs=177.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 478999999964 3589999999999999999999999999999999999999999999999887653 345677899
Q ss_pred EEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.+++. |++||+.++... ....+... .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999988875 999999864211 11111111 112333343 454445666779999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-C-CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-V-GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
|+++||||||++||+.+++.+.+.|.++. + |+|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999999875 3 7899999999999876 899999999999999887664
No 363
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=369.37 Aligned_cols=219 Identities=32% Similarity=0.524 Sum_probs=183.4
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CC
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQ 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 435 (1252)
+.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+
T Consensus 12 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 46899999999964 358999999999999999999999999999999999986 589999999998853 34
Q ss_pred HHHHhhhceEEccCCCCchhcHHHHHhcCCCC---CCHH----HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHH
Q 000856 436 LRWLRDQIGLVNQEPALFATTILENILYGKPE---ATMA----EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQ 508 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGq 508 (1252)
...++++++|++|++.+++.|++||+.++... .+.+ ++.++++..++ ..++....++.+.+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAAL-------WNEVKDKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCC-------ChhhHHHHhcCCCCCCHHH
Confidence 55678899999999999889999999875321 1221 12222222221 1122345667788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHH
Q 000856 509 KQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEE 587 (1252)
Q Consensus 509 kqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 587 (1252)
|||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999999865 89999999999999999988
Q ss_pred HHhc
Q 000856 588 LIAK 591 (1252)
Q Consensus 588 l~~~ 591 (1252)
+...
T Consensus 242 ~~~~ 245 (260)
T PRK10744 242 IFTK 245 (260)
T ss_pred HHhC
Confidence 8653
No 364
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.8e-40 Score=380.77 Aligned_cols=217 Identities=29% Similarity=0.477 Sum_probs=182.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999974 35999999999999999999999999999999999999999999999999987544 4567789
Q ss_pred eEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+|+||++.++. .|++||+.+.... ....+....+ .+.++.+ |+.........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 4999999753211 1112211111 1223322 45555566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|+++||||||++||+.+++.+++.|+++. .|+|||++||+++++.. ||+|++|++|+++..|+++++.+.
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999885 48999999999999976 899999999999999999998654
No 365
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=367.54 Aligned_cols=223 Identities=30% Similarity=0.494 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC--C---CCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD--P---TAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~--p---~~G~I~idG~di~~--~~~ 1081 (1252)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 369999999999999999999999999999999999975 4 59999999999864 345
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCC--CCC-C----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGK--EGA-T----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~--~~~-~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
..+|++++|+||++.+|..|+++|+.++. ... . ++++.++++.+++.+.+. .........||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHH
Confidence 56788999999999999999999998642 111 1 234566667776654332 112333457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999864 899999999999999999999
Q ss_pred hcCCCchh
Q 000856 1234 VSRPDGAY 1241 (1252)
Q Consensus 1234 l~~~~g~y 1241 (1252)
...+...+
T Consensus 235 ~~~~~~~~ 242 (252)
T PRK14255 235 FLNPKEKE 242 (252)
T ss_pred hcCCCChH
Confidence 87654433
No 366
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-41 Score=345.51 Aligned_cols=221 Identities=30% Similarity=0.486 Sum_probs=191.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH-hhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL-RDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 442 (1252)
-+++++++++|++ ..+++|+||++++||+++|+|||||||||++|+|+|+|+|++|+|.++|+|+...++..+ |..
T Consensus 4 lL~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 4 LLEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred eeeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 3679999999974 459999999999999999999999999999999999999999999999999999987764 456
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC------------CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE------------ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
|+--||.+.+|++ ||.||+..+... ...++-+.. ..+.+.++.+ |+....++...+||+|||
T Consensus 81 i~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~---e~A~~~Le~v--gL~~~a~~~A~~LsyG~q 155 (250)
T COG0411 81 IARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREAR---ERARELLEFV--GLGELADRPAGNLSYGQQ 155 (250)
T ss_pred ceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHH---HHHHHHHHHc--CCchhhcchhhcCChhHh
Confidence 9999999999977 999999876221 101111111 1223444444 888888999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
+|+.|||||+.+|++|+||||.++|.+.....+.+.|+++++ |.|+++|.||++.+.. ||||+||+.|+++.+|+|+
T Consensus 156 R~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~ 235 (250)
T COG0411 156 RRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPE 235 (250)
T ss_pred HHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHH
Confidence 999999999999999999999999999999999999999974 5999999999999977 8999999999999999999
Q ss_pred HHHhcc
Q 000856 587 ELIAKA 592 (1252)
Q Consensus 587 ~l~~~~ 592 (1252)
|+.++.
T Consensus 236 eV~~dp 241 (250)
T COG0411 236 EVRNNP 241 (250)
T ss_pred HHhcCH
Confidence 987653
No 367
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=372.47 Aligned_cols=222 Identities=27% Similarity=0.443 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334589999999999999999999999999999999999999999999999998877767778899
Q ss_pred eEEccCCC--CchhcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEPA--LFATTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~~--l~~~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|++|+|. ++..|+.||+.++.. ....++..+. +.+.++.+ |+.......+.+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~ 156 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIA 156 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 556799999987532 1122222111 11222222 4444455667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
.+|+++||||||++||+.+++.+.+.+.++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++....
T Consensus 157 ~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (277)
T PRK13642 157 LRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATS 231 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 99999999999999999999999999998853 89999999999999889999999999999999999886543
No 368
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.6e-39 Score=363.45 Aligned_cols=216 Identities=27% Similarity=0.449 Sum_probs=190.2
Q ss_pred CcccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHh
Q 000856 361 VNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLR 440 (1252)
Q Consensus 361 ~~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~ 440 (1252)
..+.|+++|+++.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999962 2489999999999999999999999999999999999999999999998
Q ss_pred hhceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 441 DQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
.++|++|++.+++.|++||+.++... ...++...++..++.+.+..+|.+.++.+++.+.+||||||||++|||||+.
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 49999999999999999999986432 2334455566677788888899999888999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHH-HHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhcccch
Q 000856 521 NPKILLLDEATSALDAGSESIVQEAL-DRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAKAGAY 595 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l-~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 595 (1252)
+|+++||||||++||+.+++.+.+.+ ..+.++.|+|++||+++.+..||++++|++|++++.|+++++.+....|
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 252 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDF 252 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHH
Confidence 99999999999999999999888754 5666689999999999999889999999999999999999987654333
No 369
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=365.35 Aligned_cols=227 Identities=30% Similarity=0.505 Sum_probs=191.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEEC------CcccCCCCHH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMID------GKDIRRLNLK 1082 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~id------G~di~~~~~~ 1082 (1252)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5999999999963 359999999999999999999999999999999999999999666655 5777777777
Q ss_pred HHhcccEEEccccccCcc-cHHHHhccCCC--C-CCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1083 SLRLKIGLVQQEPALFAA-SIFDNIAYGKE--G-ATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1083 ~lR~~i~~VpQd~~lf~g-TIreNl~~~~~--~-~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
.+|++++|+||++.+|.+ |+++|+.++.. . ..+ +.+.++++..++.+++.. .....+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHH
Confidence 889999999999999875 99999986421 1 122 234566677777544311 12234557999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhh-hccCEEEEEeCCEEEEecChhhh
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTI-RGVDCIGVVQDGRIVEQGSHSEL 1233 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti-~~~DrI~vl~~G~Ive~G~~~eL 1233 (1252)
||++||||++++|++|||||||++||..++..+.+.|++..+++|+|++||+++.+ ..||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999887779999999999998 45899999999999999999999
Q ss_pred hcCCCchhHHHH
Q 000856 1234 VSRPDGAYSRLL 1245 (1252)
Q Consensus 1234 l~~~~g~y~~l~ 1245 (1252)
.+.+...|.+.+
T Consensus 240 ~~~~~~~~~~~~ 251 (257)
T PRK14246 240 FTSPKNELTEKY 251 (257)
T ss_pred HhCCCcHHHHHH
Confidence 877655566554
No 370
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-40 Score=358.95 Aligned_cols=201 Identities=26% Similarity=0.507 Sum_probs=172.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. ..|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999998753 4678999
Q ss_pred EEccccccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|.+ |++||+.++.. ..+ ++++.++++..++.+... ....+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYAN-----------KRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHh-----------CcHhhCCHHHHHHHHHHHH
Confidence 99999998874 99999976421 111 334556666666654433 2335799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEec
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G 1228 (1252)
++.+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999875 47899999999998865 8999999999998764
No 371
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-40 Score=359.05 Aligned_cols=199 Identities=32% Similarity=0.518 Sum_probs=168.2
Q ss_pred EEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceE
Q 000856 366 EFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGL 445 (1252)
Q Consensus 366 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 445 (1252)
+++|++++|++. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..++++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 358999999999999999999999999999999999999999999999988753 345678999
Q ss_pred EccCC--CCchhcHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 446 VNQEP--ALFATTILENILYGKPEAT--MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 446 v~Q~~--~l~~~tv~~ni~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
++|++ .++..|++||+.++.+... .+++.+ .++.+ |+.........+||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAET---------VLKDL--DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHH---------HHHHc--CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4567799999988643221 122333 33333 454455666779999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEE
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVV 580 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~ 580 (1252)
|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 58999999999999975 8999999999975
No 372
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2e-40 Score=377.99 Aligned_cols=217 Identities=28% Similarity=0.468 Sum_probs=181.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999964 3589999999999999999999999999999999999999999999999988653 34567889
Q ss_pred eEEccCCCCch-hcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFA-TTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~-~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+|++|++.++. .|++||+.+... .....+....+ .+.++.+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999998886 499999975211 11222221111 1223333 55555566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999885 48999999999999976 899999999999999999988653
No 373
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-40 Score=367.11 Aligned_cols=220 Identities=31% Similarity=0.505 Sum_probs=188.1
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC-----CCceEEECCcccCC--CCH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP-----TAGKVMIDGKDIRR--LNL 1081 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1081 (1252)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||+++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 6999999999963 3599999999999999999999999999999999999864 69999999999864 344
Q ss_pred HHHhcccEEEccccccCcccHHHHhccCCCC-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHH
Q 000856 1082 KSLRLKIGLVQQEPALFAASIFDNIAYGKEG-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQR 1156 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQr 1156 (1252)
..+|++++|+||++.+|..|+++|+.++... ..++++.++++.+++.+.+.. -++ .....||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~----~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD---KLK----EKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH---Hhc----CCcccCCHHHHHH
Confidence 5678999999999999989999999864211 123455667777777654432 122 3345799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-ccCEEEEEe---------CCEEEE
Q 000856 1157 IAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIR-GVDCIGVVQ---------DGRIVE 1226 (1252)
Q Consensus 1157 laLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~-~~DrI~vl~---------~G~Ive 1226 (1252)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|||+|||+++.+. .||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999999877899999999999885 589999997 899999
Q ss_pred ecChhhhhcCCC
Q 000856 1227 QGSHSELVSRPD 1238 (1252)
Q Consensus 1227 ~G~~~eLl~~~~ 1238 (1252)
.|+++++...+.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999986544
No 374
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=338.44 Aligned_cols=221 Identities=29% Similarity=0.486 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHH-Hhcc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKS-LRLK 1087 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1087 (1252)
-++++|++..|.. ..+|++|||++++||+++++||||+|||||+++|+|+.+|.+|+|.++|.||...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999999999886 6889
Q ss_pred cEEEccccccCc-ccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
|+||||...+|+ -||.|||.+|.....+++-++ ..+++..+-+| -|.......+..|||||+|.+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999995 699999997633222211111 00111122233 233444556678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcCC
Q 000856 1167 PAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~~ 1237 (1252)
|++|+|||||.+|-|.--+.|.+.|+++.+ +-||++|-++..... -+||.+||++|+|+..|+.+||.+++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 999999999999999999999999999874 569999999999764 57999999999999999999999863
No 375
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-40 Score=381.47 Aligned_cols=213 Identities=30% Similarity=0.462 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCC----CHHHHh
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRL----NLKSLR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~----~~~~lR 1085 (1252)
|++ |++++|.+ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 99999999999999999999999999999999999999999999998653 244567
Q ss_pred cccEEEccccccCc-ccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1086 LKIGLVQQEPALFA-ASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~-gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
++++||||++.+|. .|++||+.++.....++++.++++..++.++....| ..||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHH
Confidence 89999999999986 699999998754445677888888888876655443 479999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCc
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDG 1239 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g 1239 (1252)
++|++|||||||++||+.+...+++.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++..
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 99999999999999999999999999998753 7899999999998755 899999999999999999999987653
No 376
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=370.22 Aligned_cols=218 Identities=28% Similarity=0.523 Sum_probs=184.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC-HHHHhhhc
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ-LRWLRDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~~~i 443 (1252)
++++|++++|++ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999963 234899999999999999999999999999999999999999999999999987664 35677789
Q ss_pred eEEccCCC--CchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEPA--LFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~~--l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|++|+|. +++.|++||+.++... .+..+... .+.+.++.+ |+.......+.+||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 4567999999876321 12222211 112233343 6666667778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|+++||||||++||+.++..+.+.++++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999875 48999999999999977999999999999999999887543
No 377
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2e-40 Score=360.31 Aligned_cols=201 Identities=34% Similarity=0.576 Sum_probs=171.9
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCC--CCHHHHhcc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRR--LNLKSLRLK 1087 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~--~~~~~lR~~ 1087 (1252)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999853 455678899
Q ss_pred cEEEccccccCc-ccHHHHhccCCC---CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHH
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGKE---GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAI 1159 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaL 1159 (1252)
++|+||++.+|. .|++||+.++.. ..+. +++.++++..++.+..... ...||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAY-----------PAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhC-----------ccccCHHHHHHHHH
Confidence 999999999886 699999976421 2222 3455566666665443332 35799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEE
Q 000856 1160 ARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRI 1224 (1252)
Q Consensus 1160 ARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~I 1224 (1252)
|||++++|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999865 899999999975
No 378
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.8e-40 Score=360.86 Aligned_cols=209 Identities=33% Similarity=0.524 Sum_probs=172.5
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH---HHHh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL---KSLR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~---~~lR 1085 (1252)
|+++||+++|++.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996321 1269999999999999999999999999999999999999999999999999988764 5678
Q ss_pred cccEEEcccc--ccC-cccHHHHhccCC----CCCCHHHH----HHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1086 LKIGLVQQEP--ALF-AASIFDNIAYGK----EGATEAEV----VEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1086 ~~i~~VpQd~--~lf-~gTIreNl~~~~----~~~~deei----~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
++++|+||++ .++ ..|+++|+.++. ....+++. .++++..++.+ ........+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 8999999999 344 579999997531 11112211 23444444421 122333457999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEec
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G 1228 (1252)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998753 789999999999987 58999999999998765
No 379
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=373.01 Aligned_cols=220 Identities=29% Similarity=0.516 Sum_probs=183.5
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC----CHHH
Q 000856 365 IEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL----QLRW 438 (1252)
Q Consensus 365 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 438 (1252)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKK 82 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997321 14589999999999999999999999999999999999999999999999988643 2345
Q ss_pred HhhhceEEccCC--CCchhcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000856 439 LRDQIGLVNQEP--ALFATTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 439 ~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~ 513 (1252)
.++.++|++|+| .++..|++||+.++.. ....++... .+.+.++.+ |+. ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl~ 155 (287)
T PRK13641 83 LRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRVA 155 (287)
T ss_pred HHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHHH
Confidence 677899999998 4777799999987532 112222111 122344444 665 3557778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||+.+|++|||||||++||+.+++.+.+.|+++. +|.|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 156 IAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999885 48999999999999865 899999999999999999887543
No 380
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.6e-40 Score=361.54 Aligned_cols=209 Identities=30% Similarity=0.514 Sum_probs=174.9
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH---Hh
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW---LR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~~ 440 (1252)
++++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996422 245899999999999999999999999999999999999999999999999987766543 33
Q ss_pred -hhceEEccCCCCchh-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 441 -DQIGLVNQEPALFAT-TILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 441 -~~i~~v~Q~~~l~~~-tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
+.++|++|++.+++. |++||+.++.. .....+... .+.+.++.+ |++......+.+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 679999999988864 99999987421 111111111 122344444 6666677778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCCEEE
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQGQVV 580 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 580 (1252)
||+.+|++|||||||++||+.+++.+.+.|+++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999885 379999999999999889999999999985
No 381
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=360.29 Aligned_cols=207 Identities=26% Similarity=0.446 Sum_probs=172.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ .++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 478999999964 35899999999999 99999999999999999999999999999999999987766 66778899
Q ss_pred EEccCCCCchh-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFAT-TILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.+|.. |++||+.+... ....++... .+.+.++.+ |+.......+.+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 148 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKA-----RVDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGD 148 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHH-----HHHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999986421 111111111 111223332 444334556678999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 149 PSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999998767999999999999975 8999999999998764
No 382
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.4e-40 Score=365.51 Aligned_cols=223 Identities=27% Similarity=0.444 Sum_probs=182.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcc-----cCCCCHHH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKD-----IRRLNLKS 1083 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~d-----i~~~~~~~ 1083 (1252)
-++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 359999999999999999999999999999999999999999999999999 87776554
Q ss_pred ----HhcccEEEccccc--cC-cccHHHHhccCC---CCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCC
Q 000856 1084 ----LRLKIGLVQQEPA--LF-AASIFDNIAYGK---EGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQL 1149 (1252)
Q Consensus 1084 ----lR~~i~~VpQd~~--lf-~gTIreNl~~~~---~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~L 1149 (1252)
.|+.++|+||++. ++ ..|+++|+.+.. .... ++++.++++..++.+ +.....+..|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~L 152 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTF 152 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccC
Confidence 3567999999984 33 357888875321 1111 223334444444321 2234455689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEE
Q 000856 1150 SGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVE 1226 (1252)
Q Consensus 1150 SgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive 1226 (1252)
|||||||++|||||+++|+||||||||++||+.+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++
T Consensus 153 S~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~ 232 (258)
T PRK11701 153 SGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVE 232 (258)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999988753 789999999999997 589999999999999
Q ss_pred ecChhhhhcCCCchhHHH
Q 000856 1227 QGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1227 ~G~~~eLl~~~~g~y~~l 1244 (1252)
.|+++++..++...|.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 233 SGLTDQVLDDPQHPYTQL 250 (258)
T ss_pred eCCHHHHhcCCCCHHHHH
Confidence 999999987655556544
No 383
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.8e-40 Score=353.68 Aligned_cols=200 Identities=35% Similarity=0.569 Sum_probs=179.1
Q ss_pred EEEEeEEEECCCCCC--CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 365 IEFKNVTFSYPSRPD--VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~--~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
++++|++++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999975321 3599999999999999999999999999999999999999999999998 5
Q ss_pred ceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 443 IGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 443 i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
|+|++|+|.+++.|++||+.++.. ...++...+++.+++.+++..+|.|+++.+++.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3345566677777888899999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHH-HHHHhc-CCCeEEEEccCccchhccCEEEEEeCCE
Q 000856 523 KILLLDEATSALDAGSESIVQE-ALDRLM-VGRTTVVVAHRLSTIRNVDTVAVIQQGQ 578 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~-~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~ 578 (1252)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999988887 455553 4799999999999998899999999985
No 384
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.8e-40 Score=365.61 Aligned_cols=217 Identities=33% Similarity=0.550 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC--CHHHHhhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL--QLRWLRDQ 442 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~--~~~~~~~~ 442 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3589999999999999999999999999999999999999999999999998754 33566778
Q ss_pred ceEEccCCCCch-hcHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 443 IGLVNQEPALFA-TTILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 443 i~~v~Q~~~l~~-~tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
++|++|++.++. .|++||+.++.. .....+... .+.+.++.+ |++......+.+||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 499999987531 111111111 123444444 676667778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999875 48999999999999966 899999999999999999887543
No 385
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=372.26 Aligned_cols=220 Identities=31% Similarity=0.522 Sum_probs=188.2
Q ss_pred ccEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-----CCCceEEECCcccCC--CC
Q 000856 1008 GEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-----PTAGKVMIDGKDIRR--LN 1080 (1252)
Q Consensus 1008 g~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-----p~~G~I~idG~di~~--~~ 1080 (1252)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 36999999999963 359999999999999999999999999999999999986 689999999999865 34
Q ss_pred HHHHhcccEEEccccccCcccHHHHhccCCCC-------------------CCHHHHHHHHHHcCchhhHhhCCCcCCCc
Q 000856 1081 LKSLRLKIGLVQQEPALFAASIFDNIAYGKEG-------------------ATEAEVVEAARAANVHGFVSALPNAYKTP 1141 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~gTIreNl~~~~~~-------------------~~deei~~al~~~~l~~~i~~lp~gldt~ 1141 (1252)
...+|++++|+||++.+|++|++||+.++... ..++++.++++.+++.+.+ ++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV-------NDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh-------hHH
Confidence 56788999999999999999999999864210 1134466667777664333 233
Q ss_pred cCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhc-cCEE-EEE
Q 000856 1142 VGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRG-VDCI-GVV 1219 (1252)
Q Consensus 1142 vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI-~vl 1219 (1252)
......+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 44556789999999999999999999999999999999999999999999998777899999999999865 8997 577
Q ss_pred eCCEEEEecChhhhhcCC
Q 000856 1220 QDGRIVEQGSHSELVSRP 1237 (1252)
Q Consensus 1220 ~~G~Ive~G~~~eLl~~~ 1237 (1252)
++|++++.|+++++++.+
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998653
No 386
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=369.18 Aligned_cols=219 Identities=32% Similarity=0.485 Sum_probs=182.3
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--C
Q 000856 362 NGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--L 434 (1252)
Q Consensus 362 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~ 434 (1252)
.+.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 346999999999963 3589999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhhhceEEccCCCCchhcHHHHHhcCCCC--C--CHH----HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCCh
Q 000856 435 QLRWLRDQIGLVNQEPALFATTILENILYGKPE--A--TMA----EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSG 506 (1252)
Q Consensus 435 ~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~--~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSg 506 (1252)
+...+++.++|++|++.+|+.|++||+.++... . ... ++..+++..++.+. +....++.+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEE-------VKDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCH
Confidence 455677889999999999988999999875310 0 111 12222222222111 12245667889999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecCh
Q 000856 507 GQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 507 GqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 585 (1252)
|||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998768899999999999966 899999999999999999
Q ss_pred HHHHh
Q 000856 586 EELIA 590 (1252)
Q Consensus 586 ~~l~~ 590 (1252)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14235 247 EKMFT 251 (267)
T ss_pred HHHHh
Confidence 88764
No 387
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.5e-40 Score=356.67 Aligned_cols=203 Identities=26% Similarity=0.429 Sum_probs=172.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 3599999999999999999999999999999999999999999999999988654 45667899
Q ss_pred EEccCCCCch-hcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFA-TTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~-~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++. .|++||+.++.. ....+++...++.. |++....+.+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVV-----------GLKDSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHc-----------CCHHHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 599999987531 11223333333333 444445566779999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999875 48999999999999976 8999999999998764
No 388
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-40 Score=369.29 Aligned_cols=220 Identities=28% Similarity=0.518 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34589999999999999999999999999999999999999999999999999877777788899
Q ss_pred eEEccCCC--CchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEPA--LFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~~--l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|++|+|. ++..|++||+.++... .+.++... .+.+.++.+ |++....+.+.+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 4466999999875321 12222211 122334443 5555667778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|+++||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 5899999999999887999999999999999998887553
No 389
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=367.64 Aligned_cols=219 Identities=33% Similarity=0.478 Sum_probs=182.9
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CC
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQ 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 435 (1252)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999964 358999999999999999999999999999999999987 699999999998853 45
Q ss_pred HHHHhhhceEEccCCCCchhcHHHHHhcCCCCC--CH---HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHH
Q 000856 436 LRWLRDQIGLVNQEPALFATTILENILYGKPEA--TM---AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkq 510 (1252)
...+++.++|++|++.+|..|++||+.++.... .. +++.++++..++ ..++.+.....+.+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAV-------WDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCC-------cchhhhhhCCCcccCCHHHHH
Confidence 566788899999999999889999998764211 11 112222222221 113334566778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeC-----------CE
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQ-----------GQ 578 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~-----------G~ 578 (1252)
|++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998778999999999999865 899999996 67
Q ss_pred EEEecChHHHHhc
Q 000856 579 VVETGTHEELIAK 591 (1252)
Q Consensus 579 i~~~g~~~~l~~~ 591 (1252)
+++.|+++++...
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 8999999988654
No 390
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=365.85 Aligned_cols=212 Identities=26% Similarity=0.419 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC--------CceEEECCcccCCCCH
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT--------AGKVMIDGKDIRRLNL 1081 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~--------~G~I~idG~di~~~~~ 1081 (1252)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999953 36999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcccEEEccccc-cCcccHHHHhccCCC-C------C---CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1082 KSLRLKIGLVQQEPA-LFAASIFDNIAYGKE-G------A---TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1082 ~~lR~~i~~VpQd~~-lf~gTIreNl~~~~~-~------~---~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
..+|+.++|+||++. +|..|++||+.++.. . . .++.++++++..++.+. .......||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATAL-----------VGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCC
Confidence 888889999999986 678999999976421 1 1 12345666667766543 233345799
Q ss_pred hhHHHHHHHHHHHc---------cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEE
Q 000856 1151 GGQKQRIAIARAVL---------KNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGV 1218 (1252)
Q Consensus 1151 gGQrQrlaLARALl---------~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~v 1218 (1252)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ ++|||+|||+++.+. .||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 789999999999985 5899999
Q ss_pred EeCCEEEEecChhhhhc
Q 000856 1219 VQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1219 l~~G~Ive~G~~~eLl~ 1235 (1252)
|++|+|++.|+++++++
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999875
No 391
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3e-40 Score=377.97 Aligned_cols=227 Identities=29% Similarity=0.419 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCC----------CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC
Q 000856 364 NIEFKNVTFSYPSRP----------DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT 433 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~----------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~ 433 (1252)
-|+++|++++|+... ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996321 2468999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhhhceEEccCC--CCch-hcHHHHHhcCC----CCCCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCC
Q 000856 434 LQLR---WLRDQIGLVNQEP--ALFA-TTILENILYGK----PEATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGV 502 (1252)
Q Consensus 434 ~~~~---~~~~~i~~v~Q~~--~l~~-~tv~~ni~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~ 502 (1252)
.+.. .+|++|+||+|+| .+++ .||.||+.++. +..+.++..... .+.++.+ |+. ...+..+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHc--CCChHHhcCCcc
Confidence 7654 3567899999998 4664 59999997532 112222222211 2233333 442 34567788
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEE
Q 000856 503 QLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQV 579 (1252)
Q Consensus 503 ~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i 579 (1252)
+|||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998853 8999999999999976 899999999999
Q ss_pred EEecChHHHHhcc-cchHH
Q 000856 580 VETGTHEELIAKA-GAYAS 597 (1252)
Q Consensus 580 ~~~g~~~~l~~~~-~~~~~ 597 (1252)
++.|+.+++.++. ..|..
T Consensus 241 ve~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EEEcCHHHHHcCCCCHHHH
Confidence 9999999987653 34544
No 392
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.7e-40 Score=371.76 Aligned_cols=214 Identities=31% Similarity=0.503 Sum_probs=183.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|+. +..+|+|+||+|++||++|++||||||||||+|+|+|++.|++|+|.++|.+...- ...+++++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999973 24599999999999999999999999999999999999999999999999988665 66778899
Q ss_pred eEEccCCCCchh-cHHHHHhcCC-----CC-CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 444 GLVNQEPALFAT-TILENILYGK-----PE-ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
||+||+|.+++. |++||+.|.. +. ...+++.+.++.. |+....+....+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELF-----------GLEDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHc-----------CCchhhCcchhhcCHHHHHHHHHHH
Confidence 999999998876 9999998732 11 1122333333333 4443335667899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC-C-CeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLMV-G-RTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~-~-~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
||+.+|+++||||||++|||.++..+.+.|+++.+ | +||+++||.++++.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999864 5 799999999999987 899999999999999999887543
No 393
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=383.00 Aligned_cols=221 Identities=35% Similarity=0.518 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCCC---------------------CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCc
Q 000856 364 NIEFKNVTFSYPSRP---------------------DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAG 422 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~---------------------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G 422 (1252)
.|+++|+++.|+..+ ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 367777777775432 12379999999999999999999999999999999999999999
Q ss_pred EEEECCccccCCCHHHH----hhhceEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccc
Q 000856 423 HVLLDNVDIKTLQLRWL----RDQIGLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYST 495 (1252)
Q Consensus 423 ~i~~~g~~~~~~~~~~~----~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 495 (1252)
+|.++|.++...+...+ +++++||+|++.+|+. |++||+.++... ...++... .+.+.++.+ |++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~ 156 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERRE-----KALDALRQV--GLEN 156 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCh
Confidence 99999999987765443 3579999999999875 999999986321 11111111 122344444 6666
Q ss_pred cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEE
Q 000856 496 QVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVA 572 (1252)
Q Consensus 496 ~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~ 572 (1252)
.......+||||||||++|||||+.+|++|||||||++||+.+++.+++.|.++. .++|+|++||+++++.. ||+|+
T Consensus 157 ~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 157 YAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEE
Confidence 6677788999999999999999999999999999999999999999999999874 48999999999999865 89999
Q ss_pred EEeCCEEEEecChHHHHhc
Q 000856 573 VIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 573 ~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|++|++++.|+++++...
T Consensus 237 vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 237 IMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred EEECCEEEecCCHHHHHhC
Confidence 9999999999999998765
No 394
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.8e-40 Score=369.29 Aligned_cols=224 Identities=29% Similarity=0.437 Sum_probs=184.1
Q ss_pred EEEEeEEEECCCC------CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH-
Q 000856 365 IEFKNVTFSYPSR------PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR- 437 (1252)
Q Consensus 365 i~~~~v~~~y~~~------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~- 437 (1252)
|+++|++|+|++. .+..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 135699999999999999999999999999999999999999999999999998776543
Q ss_pred --HHhhhceEEccCCC--Cch-hcHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHH
Q 000856 438 --WLRDQIGLVNQEPA--LFA-TTILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQ 508 (1252)
Q Consensus 438 --~~~~~i~~v~Q~~~--l~~-~tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGq 508 (1252)
.+++.++|++|++. ++. .|++||+.++.. .....+. ...+.+.++.+ |++ ...+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 35678999999983 443 599999965321 0111111 11123344444 664 45577888999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecCh
Q 000856 509 KQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 509 kqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 585 (1252)
|||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998753 8999999999999975 899999999999999999
Q ss_pred HHHHhcccch
Q 000856 586 EELIAKAGAY 595 (1252)
Q Consensus 586 ~~l~~~~~~~ 595 (1252)
+++......|
T Consensus 236 ~~~~~~~~~~ 245 (265)
T TIGR02769 236 AQLLSFKHPA 245 (265)
T ss_pred HHHcCCCCHH
Confidence 9987644333
No 395
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=369.73 Aligned_cols=219 Identities=29% Similarity=0.488 Sum_probs=184.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3489999999999999999999999999999999999999999999999998776667778889
Q ss_pred eEEccCCC--CchhcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEPA--LFATTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~~--l~~~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+||+|++. +++.|++||+.++.. ..+.++..+ ...+.++.+ |+.......+..||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 667799999987532 122221111 112233333 4544556677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchh-ccCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIR-NVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|+++||||||++||+.+++.+.+.++++.+ |+|+|++||+++.+. .||||++|++|++++.|+++++.+.
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999998753 899999999999985 4899999999999999999998654
No 396
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=365.84 Aligned_cols=218 Identities=29% Similarity=0.436 Sum_probs=182.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCCCHHH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTLQLRW 438 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~~~~ 438 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999964 3489999999999999999999999999999999999974 7999999999998777777
Q ss_pred HhhhceEEccCCCCc-hhcHHHHHhcCCCCC----CHHHHHHHHHHhcHHHHHhhCCCCc----cccccCCCCCCChHHH
Q 000856 439 LRDQIGLVNQEPALF-ATTILENILYGKPEA----TMAEVEAAASAANAHSFITLLPNGY----STQVGERGVQLSGGQK 509 (1252)
Q Consensus 439 ~~~~i~~v~Q~~~l~-~~tv~~ni~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~g~~LSgGqk 509 (1252)
+++.|+|++|++.++ ..|++||+.++.... ...+..+ .+.+.++.+ |+ .......+.+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQE-----RVRWALEKA--QLWDEVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHH-----HHHHHHHHc--CCCcchhhhhcCCcccCCHHHH
Confidence 888999999999766 469999998753210 1111111 112223322 32 2345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 899999999999999999988
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 643
No 397
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=373.00 Aligned_cols=222 Identities=28% Similarity=0.496 Sum_probs=182.3
Q ss_pred ccEEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC----C-C
Q 000856 363 GNIEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT----L-Q 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~----~-~ 435 (1252)
+.|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4699999999997532 1358999999999999999999999999999999999999999999999998752 1 3
Q ss_pred HHHHhhhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHH
Q 000856 436 LRWLRDQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkq 510 (1252)
...+++.|+|++|++ .++..|++||+.++... ...++.... +.+.++.+ |+. ...++.+.+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 456778899999998 46677999999875321 122221111 11223332 442 3456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEE 587 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 587 (1252)
|++|||||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999875 38999999999999865 89999999999999999988
Q ss_pred HHhc
Q 000856 588 LIAK 591 (1252)
Q Consensus 588 l~~~ 591 (1252)
+.+.
T Consensus 238 ~~~~ 241 (289)
T PRK13645 238 IFSN 241 (289)
T ss_pred HhcC
Confidence 7553
No 398
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3e-40 Score=370.64 Aligned_cols=218 Identities=26% Similarity=0.447 Sum_probs=183.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HHh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WLR 440 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~ 440 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 3589999999999999999999999999999999999999999999999998765543 356
Q ss_pred hhceEEccCCCCchh-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 441 DQIGLVNQEPALFAT-TILENILYGKPE---ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
++++|++|++.+++. |++||+.++... ....+.. ..+.+.++.+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999876 999999864211 1111111 1112233333 5555566777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-C-CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLM-V-GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
||+.+|+++||||||++||+.+++.+.+.|+++. + |+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999875 3 7999999999999876 899999999999999999998764
No 399
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-40 Score=367.45 Aligned_cols=220 Identities=30% Similarity=0.484 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 23589999999999999999999999999999999999999999999999999877777788899
Q ss_pred eEEccCCC-Cc-hhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 444 GLVNQEPA-LF-ATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 444 ~~v~Q~~~-l~-~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
+|++|+|. ++ ..|+++|+.++... ...++.... +.+.++.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRR-----VSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 55999999886321 112221111 12223333 4444556677899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+|+++||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 7999999999999888999999999999999999887654
No 400
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-40 Score=362.66 Aligned_cols=218 Identities=25% Similarity=0.413 Sum_probs=181.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH-HHhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR-WLRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~-~~~~~ 442 (1252)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 3589999999999999999999999999999999999999999999999998877654 35678
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
++|++|++.+|+. |++||+.++.......+....+ .+.++.++ ++.......+.+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999998875 9999998764222222221111 11222221 122233456779999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999875 48999999999998765 89999999999999999998864
No 401
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-40 Score=367.61 Aligned_cols=217 Identities=29% Similarity=0.443 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999964 3589999999999999999999999999999999999999999999999998877777788899
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEA------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
+|++|++.++.. |+.||+.++.... ...... ..+.+.++.+ |+.........+||||||||++|||
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~lar 160 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADR-----EKVEEAISLV--GLKPLAHRLVDSLSGGERQRAWIAM 160 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHH-----HHHHHHHHHc--CCHHHhcCCcccCCHHHHHHHHHHH
Confidence 999999877665 9999998753210 000100 0112223333 4444455666799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-C-CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLM-V-GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~-~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
||+.+|+++||||||++||+.+++.+.+.|.++. . |+|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999884 3 7999999999999865 89999999999999999888754
No 402
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-40 Score=369.49 Aligned_cols=221 Identities=29% Similarity=0.515 Sum_probs=185.9
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCC---cEEEECCccccCCCHHHH
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNA---GHVLLDNVDIKTLQLRWL 439 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~---G~i~~~g~~~~~~~~~~~ 439 (1252)
..|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999642 2358999999999999999999999999999999999999998 899999999987766677
Q ss_pred hhhceEEccCCC--CchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 440 RDQIGLVNQEPA--LFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 440 ~~~i~~v~Q~~~--l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
+++++|++|+|. +++.|++||+.++... .+.++..+ .+.+.++.+ |+....+....+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5567999999876322 12222111 112233333 555556677789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||+.+|+++||||||++||+.+++.+.+.|+++.+ |+|||++||+++.+..||++++|++|++++.|+++++...
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998753 8999999999999987999999999999999999887653
No 403
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=363.57 Aligned_cols=217 Identities=25% Similarity=0.441 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~ 442 (1252)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3789999999963 35999999999999999999999999999999999999999999999999987766543 5678
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPE---ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
++|++|++.++.. |++||+.++... ...++. ...+.+.++.+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875321 111111 11233455555 666667778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
+.+|++|||||||++||+.+++.+.+.++++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998875 48999999999988865 89999999999999999988754
No 404
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=8.7e-40 Score=354.63 Aligned_cols=202 Identities=34% Similarity=0.580 Sum_probs=176.7
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++||+++|+. .++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||+++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999951 468999999999999999999999999999999999999999999999987644 4678899
Q ss_pred EEccccccCc-ccHHHHhccCC-CC-----CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGK-EG-----ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~-~~-----~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||+|.+|. .|++||+.++. +. ..++++.++++..++.+.....| ..||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 9999999887 49999997531 11 13456777888888877665554 3699999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~ 1229 (1252)
++++|+++||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999999875 37899999999998864 89999999999999874
No 405
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.4e-40 Score=361.81 Aligned_cols=214 Identities=31% Similarity=0.487 Sum_probs=178.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhhc
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 443 (1252)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999974 35899999999999999999999999999999999999999999999999988776554 45679
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
+|++|++.+|+. |++||+.++........ ... ..+.++.+ +++.....+...+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~~-----~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RKI-----PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HHH-----HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999876 99999987532211110 000 01112221 12334456677899999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
+++||||||++||+.+++.+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999998753 7999999999999986 899999999999999999887
No 406
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.1e-40 Score=366.88 Aligned_cols=218 Identities=35% Similarity=0.548 Sum_probs=183.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC--------
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ-------- 435 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-------- 435 (1252)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3889999999974 35899999999999999999999999999999999999999999999999886432
Q ss_pred HHHHhhhceEEccCCCCch-hcHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHH
Q 000856 436 LRWLRDQIGLVNQEPALFA-TTILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~-~tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
...+++.++|++|++.+++ .|++||+.++.. ....++... .+.+.++.+ |+....+..+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 2456778999999998886 599999986421 111111111 123344444 66666677888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
++|||||+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999875 48999999999999976 8999999999999999998876
Q ss_pred hc
Q 000856 590 AK 591 (1252)
Q Consensus 590 ~~ 591 (1252)
+.
T Consensus 233 ~~ 234 (250)
T PRK11264 233 AD 234 (250)
T ss_pred cC
Confidence 43
No 407
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.7e-40 Score=363.30 Aligned_cols=221 Identities=27% Similarity=0.462 Sum_probs=185.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH-Hhhhc
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW-LRDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~-~~~~i 443 (1252)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999974 35899999999999999999999999999999999999999999999999987766554 34579
Q ss_pred eEEccCCCCchh-cHHHHHhcCCCCCC-H-HH---HHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 444 GLVNQEPALFAT-TILENILYGKPEAT-M-AE---VEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 444 ~~v~Q~~~l~~~-tv~~ni~~~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
+|++|++.++++ |++||+.++..... . .. .........+.+.++.+ |++....+...+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 99999987532100 0 00 00001111233455554 67666778889999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999976 89999999999999999988754
No 408
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-40 Score=370.80 Aligned_cols=216 Identities=34% Similarity=0.498 Sum_probs=178.9
Q ss_pred EEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH----hh
Q 000856 366 EFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL----RD 441 (1252)
Q Consensus 366 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~----~~ 441 (1252)
.++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46688888863 358999999999999999999999999999999999999999999999999877655432 35
Q ss_pred hceEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 442 QIGLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
+++|++|++.+++ .|++||+.++... ....+... .+.+.++.+ |+.........+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 7999999999885 5999999875211 11111111 112333333 555556667779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+.+|+++||||||++||+.+++.+.+.|.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999874 37999999999999865 899999999999999999988654
No 409
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-40 Score=370.79 Aligned_cols=220 Identities=32% Similarity=0.547 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC----CHHH
Q 000856 365 IEFKNVTFSYPSRP--DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL----QLRW 438 (1252)
Q Consensus 365 i~~~~v~~~y~~~~--~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~ 438 (1252)
|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997422 13589999999999999999999999999999999999999999999999988653 3456
Q ss_pred HhhhceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000856 439 LRDQIGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 439 ~~~~i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~ 513 (1252)
+++.|+|++|++ .+++.|++||+.++... .+.++.... +.+.++.+ |+. ......+.+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 778899999998 57788999999875321 122222211 12333433 554 3456778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||+.+|++|||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999875 48999999999999865 899999999999999999887553
No 410
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-40 Score=369.10 Aligned_cols=221 Identities=28% Similarity=0.477 Sum_probs=184.7
Q ss_pred cEEEEeEEEECCCCC---CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC-HHHH
Q 000856 364 NIEFKNVTFSYPSRP---DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ-LRWL 439 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~---~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~ 439 (1252)
.++++|++++|++.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999997431 246999999999999999999999999999999999999999999999999987543 3456
Q ss_pred hhhceEEccCCC--CchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 440 RDQIGLVNQEPA--LFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 440 ~~~i~~v~Q~~~--l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
++.++|++|+|. ++..|+.+|+.|+... ....+... .+.+.++.+ |+....++...+||||||||++||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~la 156 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKV--GMYEYRRHAPHLLSGGQKQRVAIA 156 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHH
Confidence 788999999984 6666999999886321 11111111 112233333 555556667789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCCEEEEecChHHHHhc
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||+.+|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 157 GILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999999884 38999999999999988999999999999999999998654
No 411
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=5.9e-40 Score=345.17 Aligned_cols=178 Identities=34% Similarity=0.629 Sum_probs=163.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 4789999999753 23589999999999999999999999999999999999999999999999988665 556778899
Q ss_pred EEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000856 445 LVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKI 524 (1252)
Q Consensus 445 ~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~i 524 (1252)
|++|++++++.|++||+ +.+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999988999997 458999999999999999999999
Q ss_pred EEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhccCEEEEEeCCEEEEec
Q 000856 525 LLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 525 lllDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
+||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998754
No 412
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.8e-40 Score=374.21 Aligned_cols=216 Identities=24% Similarity=0.406 Sum_probs=185.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....++++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 459999999999999999999999999999999999999999999999998866 3456778899
Q ss_pred EEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|+||++.++.. |++||+.+.... ...++... .+.+.++.+ |++...++...+||||||||++|||||+.+
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 999999753211 11111111 123344444 677777788899999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|+++||||||++||+.+++.+++.++++.+++|+|++||+++++.. ||||++|++|+++..|+.+++.+.
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998778999999999999876 899999999999999999998654
No 413
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.9e-40 Score=375.47 Aligned_cols=200 Identities=27% Similarity=0.478 Sum_probs=174.1
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcc-cHH
Q 000856 1025 VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAA-SIF 1103 (1252)
Q Consensus 1025 ~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~g-TIr 1103 (1252)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999876 445678899999999998875 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCC
Q 000856 1104 DNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATS 1177 (1252)
Q Consensus 1104 eNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS 1177 (1252)
||+.+... ..+ ++++.++++..++.+.. +..+ ..||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-------DRPV----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------CCch----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99976321 122 33466777777775433 2333 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1178 ALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1178 ~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
+||+.+...+++.|++.. +++|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47899999999999864 899999999999999999998764
No 414
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=366.70 Aligned_cols=220 Identities=29% Similarity=0.406 Sum_probs=181.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCcccc--CCCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIK--TLQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~--~~~~ 436 (1252)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. ..+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999964 3489999999999999999999999999999999999987 4999999999986 3455
Q ss_pred HHHhhhceEEccCCCCchh-cHHHHHhcCCCCC----CHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFAT-TILENILYGKPEA----TMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqk 509 (1252)
..++++++|++|++.+|.. |++||+.++.... ..++.... +.+.++.+ ...+.......+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~ 155 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDER-----VEWALKKAALWDEVKDRLNDYPSNLSGGQR 155 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHH-----HHHHHHHcCCccchhhhhccChhhCCHHHH
Confidence 5677889999999999876 9999998753110 11111111 11122222 11112345667889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++|||||+++|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 156 QRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767999999999999865 899999999999999999988
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 236 ~~~ 238 (253)
T PRK14267 236 FEN 238 (253)
T ss_pred HhC
Confidence 653
No 415
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.3e-40 Score=363.62 Aligned_cols=213 Identities=23% Similarity=0.363 Sum_probs=177.3
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccC--CCCCceEEECCcccCCCCHHHH-hc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFY--DPTAGKVMIDGKDIRRLNLKSL-RL 1086 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~--~p~~G~I~idG~di~~~~~~~l-R~ 1086 (1252)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+. +|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 36999999999999999999999999999999999994 7999999999999988877654 45
Q ss_pred ccEEEccccccCcc-cHHHHhccCCCC---------CC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChh
Q 000856 1087 KIGLVQQEPALFAA-SIFDNIAYGKEG---------AT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGG 1152 (1252)
Q Consensus 1087 ~i~~VpQd~~lf~g-TIreNl~~~~~~---------~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgG 1152 (1252)
.++|+||++.+|.+ |+++|+.+.... .+ ++.+.++++..++.+.. .+..+. ..||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G 148 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGG 148 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHH
Confidence 69999999998875 899998643110 11 23455566666654211 122221 249999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhc--cCEEEEEeCCEEEEecC
Q 000856 1153 QKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRG--VDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1153 QrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~--~DrI~vl~~G~Ive~G~ 1229 (1252)
||||++|||||+++|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (243)
T TIGR01978 149 EKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGD 228 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999999875 47899999999999875 79999999999999999
Q ss_pred hhhhh
Q 000856 1230 HSELV 1234 (1252)
Q Consensus 1230 ~~eLl 1234 (1252)
++++-
T Consensus 229 ~~~~~ 233 (243)
T TIGR01978 229 VELAK 233 (243)
T ss_pred HHHhc
Confidence 98654
No 416
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-39 Score=362.74 Aligned_cols=227 Identities=28% Similarity=0.404 Sum_probs=187.2
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCC----CCceEEECCcccCCCCHHHH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDP----TAGKVMIDGKDIRRLNLKSL 1084 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p----~~G~I~idG~di~~~~~~~l 1084 (1252)
.++++||+++| + .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 2599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcccEEEccccc-cCc--ccHHHHhccC----CCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1085 RLKIGLVQQEPA-LFA--ASIFDNIAYG----KEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1085 R~~i~~VpQd~~-lf~--gTIreNl~~~----~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
++.++||||++. .|. .|+.+|+... .....+++++++++.+++.++. +.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--------~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAA--------RVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChh--------hhhhcCCcccCHHHHHHH
Confidence 467999999985 343 5787776431 1223456778888888876531 122334467999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhh
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELV 1234 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl 1234 (1252)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+. .||++++|++|++++.|++++++
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 789999999999986 58999999999999999999998
Q ss_pred cCCCc-hhHHHHHHhh
Q 000856 1235 SRPDG-AYSRLLQLQH 1249 (1252)
Q Consensus 1235 ~~~~g-~y~~l~~~q~ 1249 (1252)
+.+.. .++.++..+.
T Consensus 230 ~~~~~~~~~~~~~~~~ 245 (254)
T PRK10418 230 NAPKHAVTRSLVSAHL 245 (254)
T ss_pred hCCCCHHHHHHHHhhh
Confidence 76544 3445665543
No 417
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=366.35 Aligned_cols=220 Identities=29% Similarity=0.461 Sum_probs=181.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 436 (1252)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3489999999999999999999999999999999999985 899999999988643 23
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQRI 512 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqRv 512 (1252)
..+++.++|++|++.+|+.|++||+.++... ...++... .+.+.++.+ ........++.+.+||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG-----VVENALRSAALWDETSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHH
Confidence 4567789999999999889999999875311 11211111 111222222 00112345667789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 513 AIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 513 ~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999998778999999999999865 899999999999999999988643
No 418
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-40 Score=362.58 Aligned_cols=204 Identities=31% Similarity=0.471 Sum_probs=174.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.+
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999964 35899999999999999999999999999999999999999999999997653 456789
Q ss_pred eEEccCCCCch-hcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 444 GLVNQEPALFA-TTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 444 ~~v~Q~~~l~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
+|++|++.+++ .|++||+.++......+++. +.++.+ |+.....+.+.+||||||||++|||||+.+|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~---------~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAAL---------QALAAV--GLADRANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHH---------HHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 59999998864211112222 233333 5555567778899999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|+++++|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998874 37999999999999865 8999999999999888654
No 419
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-40 Score=368.12 Aligned_cols=217 Identities=28% Similarity=0.425 Sum_probs=179.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCcccc--CCCHHHHhhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIK--TLQLRWLRDQ 442 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~--~~~~~~~~~~ 442 (1252)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. +.+...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999964 34899999999999999999999999999999999999999999999999985 2334566788
Q ss_pred ceEEccCCC--CchhcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 443 IGLVNQEPA--LFATTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 443 i~~v~Q~~~--l~~~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
++|++|++. ++..|+.+|+.++.. .....+.... +.+.++.+ |+.......+.+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 566789999987421 1122221111 12233333 444445566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+.+|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999875 48999999999999865 899999999999999999887654
No 420
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-40 Score=360.07 Aligned_cols=209 Identities=35% Similarity=0.498 Sum_probs=173.7
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
++++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997421 1469999999999999999999999999999999999999999999999988753 35679
Q ss_pred eEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhcc
Q 000856 444 GLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLK 520 (1252)
Q Consensus 444 ~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~ 520 (1252)
+|++|++.++. .|++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999887 5999999875321 1111111 1122344444 56555667778999999999999999999
Q ss_pred CCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEe--CCEEEEecCh
Q 000856 521 NPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQ--QGQVVETGTH 585 (1252)
Q Consensus 521 ~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~--~G~i~~~g~~ 585 (1252)
+|+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||++++|+ +|+++++++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999874 37999999999998865 89999999 7999988764
No 421
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.4e-40 Score=361.13 Aligned_cols=213 Identities=35% Similarity=0.518 Sum_probs=174.6
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH---HHHh
Q 000856 365 IEFKNVTFSYPSRP-DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL---RWLR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~-~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~ 440 (1252)
|+++|++++|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996431 1258999999999999999999999999999999999999999999999999877663 4677
Q ss_pred hhceEEccCC--CCc-hhcHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000856 441 DQIGLVNQEP--ALF-ATTILENILYGKPE---ATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 441 ~~i~~v~Q~~--~l~-~~tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~ 513 (1252)
++++|++|++ .++ ..|++||+.++... ...++..... ..+.++.+ |+. ...+..+.+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8899999999 344 45999999764211 1111111100 02334444 553 4567788899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|||||+.+|+++||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998853 8999999999999875 8999999999998754
No 422
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-40 Score=365.27 Aligned_cols=220 Identities=27% Similarity=0.444 Sum_probs=181.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC--C---CCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD--P---NAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~--~~~ 436 (1252)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999974 358999999999999999999999999999999999997 3 69999999998863 344
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
..+++.++|++|++.+++.|++||+.++.... ..++.... +.+.++.+ .+.+.+..+..+.+||||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qr 163 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEI-----VEKSLKDVALWDEVKDRLHTQALSLSGGQQQR 163 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhhhhhhCCcccCCHHHHHH
Confidence 56778899999999999889999998753211 11111111 11222222 1111234567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 164 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 164 LCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999999999999999999999998778999999999999865 89999999999999999999865
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
+
T Consensus 244 ~ 244 (259)
T PRK14274 244 N 244 (259)
T ss_pred C
Confidence 3
No 423
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.8e-40 Score=368.56 Aligned_cols=214 Identities=30% Similarity=0.534 Sum_probs=188.2
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
.++++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999962 24699999999999999999999999999999999999999999999999998765 67889999
Q ss_pred EEEccccccCc-ccHHHHhccCC-----C-CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHH
Q 000856 1089 GLVQQEPALFA-ASIFDNIAYGK-----E-GATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIAR 1161 (1252)
Q Consensus 1089 ~~VpQd~~lf~-gTIreNl~~~~-----~-~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLAR 1161 (1252)
|||||+|.++. -|++|||.+.. + ...++.+.+.++..++.+.- +.++ ..||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKKV----RTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccch----hhcCHHHHHHHHHHH
Confidence 99999998775 59999998642 1 12356788899999887621 2333 469999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-C-CeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcC
Q 000856 1162 AVLKNPAILLLDEATSALDAESECVLQEALERLMR-G-RTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1162 ALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~-~-~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
||+++|++|||||||++||+.+...+++.|+++.+ + +||++.||.++.+.. ||||++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999874 4 799999999999976 899999999999999999998654
No 424
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.3e-40 Score=357.61 Aligned_cols=207 Identities=31% Similarity=0.543 Sum_probs=173.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999974 3589999999999999999999999999999999999999999999999998655432 35799
Q ss_pred EEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++. .|++||+.++... ...++..+ .+.+.++.+ |++....+.+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 4999999875321 11222111 112333444 566566777789999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999875 38999999999999876 8999999999998765
No 425
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=366.11 Aligned_cols=220 Identities=29% Similarity=0.434 Sum_probs=180.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5899999999963 358999999999999999999999999999999999864 799999999998864 334
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
..++++++|++|++.+|+.|++||+.++.... ........ +.+.+..+ ..++....+..+.+||||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 172 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEI-----VEESLTKAALWDEVKDRLHSSALSLSGGQQQR 172 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCCcchHHHHhcCcccCCHHHHHH
Confidence 45677899999999999889999998753111 11111111 11112221 1112234567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 173 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 173 LCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999998767899999999998865 89999999999999999988765
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
.
T Consensus 253 ~ 253 (268)
T PRK14248 253 S 253 (268)
T ss_pred C
Confidence 3
No 426
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=363.89 Aligned_cols=223 Identities=25% Similarity=0.427 Sum_probs=187.4
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCC---CceEEECCcccCCC-----C
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPT---AGKVMIDGKDIRRL-----N 1080 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~---~G~I~idG~di~~~-----~ 1080 (1252)
-++++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 36999999999999999999999999999999999999986 49999999998653 3
Q ss_pred HHHHhcccEEEccccccCc-ccHHHHhccCCC--------------CCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCC
Q 000856 1081 LKSLRLKIGLVQQEPALFA-ASIFDNIAYGKE--------------GATEAEVVEAARAANVHGFVSALPNAYKTPVGER 1145 (1252)
Q Consensus 1081 ~~~lR~~i~~VpQd~~lf~-gTIreNl~~~~~--------------~~~deei~~al~~~~l~~~i~~lp~gldt~vge~ 1145 (1252)
...+|++++|+||++.+|. .|+++|+.++.. ...++++.++++..++.+.... .
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------R 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------C
Confidence 4567889999999998887 599999986421 1123456777777777654433 2
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hccCEEEEEeCC
Q 000856 1146 GVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTI-RGVDCIGVVQDG 1222 (1252)
Q Consensus 1146 G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrI~vl~~G 1222 (1252)
...||||||||++||||++.+|++|||||||++||..+...+.+.|++.. +++|+|++||+++.+ ..||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 34699999999999999999999999999999999999999999999875 378999999999986 558999999999
Q ss_pred EEEEecChhhhhcCCCchhHHHHHHh
Q 000856 1223 RIVEQGSHSELVSRPDGAYSRLLQLQ 1248 (1252)
Q Consensus 1223 ~Ive~G~~~eLl~~~~g~y~~l~~~q 1248 (1252)
++++.|+++++ . +....+++...
T Consensus 230 ~i~~~g~~~~~-~--~~~~~~~~~~~ 252 (262)
T PRK09984 230 HVFYDGSSQQF-D--NERFDHLYRSI 252 (262)
T ss_pred EEEEeCCHHHh-c--cHHHHHHHhhh
Confidence 99999999997 2 33456665543
No 427
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=364.81 Aligned_cols=216 Identities=30% Similarity=0.461 Sum_probs=183.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 35899999999999999999999999999999999999999999999999988777777778899
Q ss_pred EEccCCCCchh-cHHHHHhcCCCCC----C--HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000856 445 LVNQEPALFAT-TILENILYGKPEA----T--MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARA 517 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARa 517 (1252)
|++|++.++.+ |++||+.++.... . ..+.. ..+.+.++.+ |++......+..||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lara 152 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDN-----ARVNQAMEQT--RINHLADRRLTDLSGGQRQRAFLAMV 152 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHH-----HHHHHHHHHc--CCHHHHcCCcccCCHHHHHHHHHHHH
Confidence 99999988876 9999998863210 0 01100 1112223332 55555667788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 518 MLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 518 l~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++..|+.+++..
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 153 LAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999875 48999999999999876 89999999999999999888754
No 428
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.3e-40 Score=365.41 Aligned_cols=217 Identities=32% Similarity=0.537 Sum_probs=183.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCC---------
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQ--------- 435 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~--------- 435 (1252)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 478999999964 35899999999999999999999999999999999999999999999999886542
Q ss_pred ----HHHHhhhceEEccCCCCch-hcHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChH
Q 000856 436 ----LRWLRDQIGLVNQEPALFA-TTILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGG 507 (1252)
Q Consensus 436 ----~~~~~~~i~~v~Q~~~l~~-~tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgG 507 (1252)
...+++.++|++|++.++. .|++||+.++.. .....+.. ..+.+.++.+ |++...++.+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2356778999999999886 599999987521 11111111 1223445554 6666677788899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecC
Q 000856 508 QKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 508 qkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 584 (1252)
||||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 8999999999999865 89999999999999999
Q ss_pred hHHHHhc
Q 000856 585 HEELIAK 591 (1252)
Q Consensus 585 ~~~l~~~ 591 (1252)
++++.+.
T Consensus 231 ~~~~~~~ 237 (252)
T TIGR03005 231 PDEIFRQ 237 (252)
T ss_pred HHHHhcC
Confidence 9888654
No 429
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=362.73 Aligned_cols=222 Identities=29% Similarity=0.507 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----CcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN-----AGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~~--~~ 436 (1252)
.++++|++|+|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999964 34899999999999999999999999999999999999997 69999999988643 34
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPE--A-TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIA 513 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~ 513 (1252)
..+++.++|++|++.+++.|++||+.++... . ..++..+.... +.+.. .+.+++....++.+.+||||||||++
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~--~l~~~-~l~~~l~~~~~~~~~~LS~Gq~qrv~ 157 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEK--SLRQA-ALWDEVKDNLHKSGLALSGGQQQRLC 157 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHH--HHHHh-CCchhhhhHhhCCcccCCHHHHHHHH
Confidence 5677889999999999988999999876321 1 11111111110 11111 11112234467788899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 514 IARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 514 lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14249 158 IARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFSR 236 (251)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988668999999999999876 799999999999999999887543
No 430
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=363.01 Aligned_cols=218 Identities=32% Similarity=0.505 Sum_probs=181.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 436 (1252)
.|+++|++++|++ .++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 5899999999974 3489999999999999999999999999999999999763 69999999998864 344
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CH----HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TM----AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
..+|+.++|++|++.+++.|++||+.++.... .. +++.++++..++. +++....++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALW-------DEVKDRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCc-------hhhHHHHhcCCCCCCHHHH
Confidence 56778899999999988899999998753211 11 1122222222211 1222345667889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998866 899999999999999999887
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 233 ~~~ 235 (250)
T PRK14240 233 FTN 235 (250)
T ss_pred HhC
Confidence 643
No 431
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.7e-40 Score=356.70 Aligned_cols=205 Identities=37% Similarity=0.617 Sum_probs=172.0
Q ss_pred EEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceE
Q 000856 366 EFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGL 445 (1252)
Q Consensus 366 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 445 (1252)
+++|++++|++. +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999742 1458999999999999999999999999999999999999999999999999887777777889999
Q ss_pred EccCCC--CchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 446 VNQEPA--LFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 446 v~Q~~~--l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
++|++. ++..|++||+.++... ....+... .+.+.++.+ |++....+.+.+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999984 5667999999875321 11111111 122334444 555556777889999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCE
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQ 578 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~ 578 (1252)
|+++||||||++||+.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999885 48999999999999987 89999999984
No 432
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=362.85 Aligned_cols=216 Identities=29% Similarity=0.445 Sum_probs=182.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999974 35899999999999999999999999999999999999999999999999988777777778899
Q ss_pred EEccCCCC-chhcHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc--
Q 000856 445 LVNQEPAL-FATTILENILYGKPEA--TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML-- 519 (1252)
Q Consensus 445 ~v~Q~~~l-~~~tv~~ni~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~-- 519 (1252)
|++|++.+ +..|++||+.++.... ...+... .+.+.++.+ |+.......+.+||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~~ 152 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA-----LVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQL 152 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH-----HHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhcc
Confidence 99999987 4569999998753211 1111111 112233333 5555566778899999999999999999
Q ss_pred ----cCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 520 ----KNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 520 ----~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
.+|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 153 WEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999875 48999999999999875 89999999999999999888754
No 433
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.2e-40 Score=365.37 Aligned_cols=219 Identities=32% Similarity=0.524 Sum_probs=183.6
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC--------
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL-------- 434 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~-------- 434 (1252)
+.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 45999999999963 3589999999999999999999999999999999999999999999999987532
Q ss_pred -----CHHHHhhhceEEccCCCCchh-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccc-cCCCCCC
Q 000856 435 -----QLRWLRDQIGLVNQEPALFAT-TILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQV-GERGVQL 504 (1252)
Q Consensus 435 -----~~~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~L 504 (1252)
....+++.++|++|++.++.. |++||+.++.. .....+.. ..+.+.++.+ |+.... +..+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHc--CCChhhhhCCcccC
Confidence 134567789999999999875 99999976421 11111111 1122344444 565543 6778899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEe
Q 000856 505 SGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVET 582 (1252)
Q Consensus 505 SgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 582 (1252)
|||||||++|||||+++|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||||++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999885 48999999999999986 899999999999999
Q ss_pred cChHHHHhc
Q 000856 583 GTHEELIAK 591 (1252)
Q Consensus 583 g~~~~l~~~ 591 (1252)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999887643
No 434
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-40 Score=320.08 Aligned_cols=217 Identities=32% Similarity=0.539 Sum_probs=185.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC---------
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL--------- 434 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~--------- 434 (1252)
.++++|++++|++. .+|+++|++-++|+.+.|+|.|||||||++++|.=+..|+.|+|.++|++++-.
T Consensus 6 ~l~v~dlHK~~G~~---eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhcccc---hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 58999999999753 499999999999999999999999999999999999999999999999887421
Q ss_pred ----CHHHHhhhceEEccCCCCchh-cHHHHHhcCCCC---CCH-HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 435 ----QLRWLRDQIGLVNQEPALFAT-TILENILYGKPE---ATM-AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 435 ----~~~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
....+|.+.++|+|+..|++. ||.||+.-+.-. .+. +.++.+ ..++... |+.......+..||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~A------e~~L~kV--Gi~ek~~~YP~~LS 154 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERA------EKYLAKV--GIAEKADAYPAHLS 154 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHH------HHHHHHh--CchhhhhcCccccC
Confidence 134578899999999999976 999999754211 111 222221 2334433 77777778888999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|||+||+||||||+.+|+++++|||||+|||+-.-++.+.++++. .|+|.++|||.+.+.+. ..+|++|++|.|-|+|
T Consensus 155 GGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G 234 (256)
T COG4598 155 GGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEG 234 (256)
T ss_pred chHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccC
Confidence 999999999999999999999999999999999999999999986 59999999999999998 5999999999999999
Q ss_pred ChHHHHhc
Q 000856 584 THEELIAK 591 (1252)
Q Consensus 584 ~~~~l~~~ 591 (1252)
+|+++..+
T Consensus 235 ~P~qvf~n 242 (256)
T COG4598 235 PPEQVFGN 242 (256)
T ss_pred ChHHHhcC
Confidence 99998765
No 435
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.9e-40 Score=377.25 Aligned_cols=205 Identities=29% Similarity=0.440 Sum_probs=172.4
Q ss_pred CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCc----cccCCCHHHH---h-hhceEEccCCC
Q 000856 380 VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNV----DIKTLQLRWL---R-DQIGLVNQEPA 451 (1252)
Q Consensus 380 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~----~~~~~~~~~~---~-~~i~~v~Q~~~ 451 (1252)
..+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+ ++...+...+ | ++++||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 5655554433 3 57999999999
Q ss_pred Cch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000856 452 LFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLD 528 (1252)
Q Consensus 452 l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlD 528 (1252)
+|+ .|++||+.++... ...++.. ..+.+.++.+ |++......+.+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 5999999986421 1111111 1122334444 6666667777899999999999999999999999999
Q ss_pred CCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 529 EATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 529 Epts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
||||+||+.+++.+++.|.++.+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 99999999999999999998853 8999999999999855 899999999999999999998764
No 436
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.1e-39 Score=356.55 Aligned_cols=213 Identities=29% Similarity=0.430 Sum_probs=180.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhc
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQI 443 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i 443 (1252)
.|+++|++++|++ ..+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5899999999963 3589999999999999999999999999999999999999999999999998887777778899
Q ss_pred eEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 444 GLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 444 ~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
+|++|++.+++.|++||+.++.......... ..+.+.++.+ |+. +.....+.+||||||||++|||||+++|
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-----AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-----HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999889999998642100000000 1122344444 553 4567888999999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEe-CCEEEEecChH
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQ-QGQVVETGTHE 586 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~-~G~i~~~g~~~ 586 (1252)
+++||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+..||++++|+ ++..+++|+|+
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999874 3889999999999998899999995 66677888775
No 437
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.4e-39 Score=377.97 Aligned_cols=212 Identities=31% Similarity=0.496 Sum_probs=180.9
Q ss_pred eEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC----HHHHhcccE
Q 000856 1014 HVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN----LKSLRLKIG 1089 (1252)
Q Consensus 1014 nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~----~~~lR~~i~ 1089 (1252)
|++++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ....|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 78999953 23 5 999999999999999999999999999999999999999999999986532 345678999
Q ss_pred EEccccccCcc-cHHHHhccCCCCCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHc
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKEGAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVL 1164 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl 1164 (1252)
||||++.+|.. |++||+.++..... ++.+.++++..++.++.... ...||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHH
Confidence 99999999975 99999987633221 23466677777765544333 3579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEecChhhhhcCCCchh
Q 000856 1165 KNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQGSHSELVSRPDGAY 1241 (1252)
Q Consensus 1165 ~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~G~~~eLl~~~~g~y 1241 (1252)
++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 99999999999999999999999999998753 7899999999999865 89999999999999999999988765444
No 438
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=351.92 Aligned_cols=225 Identities=30% Similarity=0.540 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC-C----CCceEEECCcccCCCCHHH
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD-P----TAGKVMIDGKDIRRLNLKS 1083 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~-p----~~G~I~idG~di~~~~~~~ 1083 (1252)
++++|++..|.... ...+++||||+|++||++||||+|||||||+.++++|+.+ | .+|+|.++|.|+-.++.++
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999996532 2469999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred Hh----cccEEEcccccc-Cc--ccHH----HHhccCCCC--C--CHHHHHHHHHHcCchhh---HhhCCCcCCCccCCC
Q 000856 1084 LR----LKIGLVQQEPAL-FA--ASIF----DNIAYGKEG--A--TEAEVVEAARAANVHGF---VSALPNAYKTPVGER 1145 (1252)
Q Consensus 1084 lR----~~i~~VpQd~~l-f~--gTIr----eNl~~~~~~--~--~deei~~al~~~~l~~~---i~~lp~gldt~vge~ 1145 (1252)
+| +.|++|||||.- |+ -||. |-+..-... . -.+...+.++.+++.+- .+.-|
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP---------- 151 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP---------- 151 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC----------
Confidence 43 479999999952 22 2333 333221110 1 13467888888888753 33333
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCC
Q 000856 1146 GVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDG 1222 (1252)
Q Consensus 1146 G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G 1222 (1252)
..||||||||+.||-||+.+|++||.||||+|||..++++|.+.|+++.+ +.|+|+|||++..+. -||||+||.+|
T Consensus 152 -helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG 230 (316)
T COG0444 152 -HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAG 230 (316)
T ss_pred -cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECc
Confidence 57999999999999999999999999999999999999999999999864 899999999999875 58999999999
Q ss_pred EEEEecChhhhhcCCCchhHHHH
Q 000856 1223 RIVEQGSHSELVSRPDGAYSRLL 1245 (1252)
Q Consensus 1223 ~Ive~G~~~eLl~~~~g~y~~l~ 1245 (1252)
+|||.|+.++++.++...|.+.+
T Consensus 231 ~iVE~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 231 RIVEEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EEEEeCCHHHHhcCCCChHHHHH
Confidence 99999999999999888887543
No 439
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=373.39 Aligned_cols=227 Identities=30% Similarity=0.441 Sum_probs=184.8
Q ss_pred cEEEEeEEEECCCCC-------CCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH
Q 000856 364 NIEFKNVTFSYPSRP-------DVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~-------~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~ 436 (1252)
.|+++|++++|+... ...+++||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2468999999999999999999999999999999999999999999999999987764
Q ss_pred H---HHhhhceEEccCC--CCchh-cHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHhhCCCCccc-cccCCCCCCCh
Q 000856 437 R---WLRDQIGLVNQEP--ALFAT-TILENILYGK---PEATMAEVEAAASAANAHSFITLLPNGYST-QVGERGVQLSG 506 (1252)
Q Consensus 437 ~---~~~~~i~~v~Q~~--~l~~~-tv~~ni~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~LSg 506 (1252)
. .+|++|+||+|+| .|.+. |+.+|+..+. ......+.. ..+.+.++.+ |++. .....+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERR-----EKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 4667899999998 35543 9998886421 111111111 1122334443 4432 34667789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 507 GQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 507 GqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|||||++|||||+.+|++||+||||++||+.++..+.+.|.++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999998853 8999999999999976 8999999999999999
Q ss_pred ChHHHHhcc-cchHH
Q 000856 584 THEELIAKA-GAYAS 597 (1252)
Q Consensus 584 ~~~~l~~~~-~~~~~ 597 (1252)
+.+++.++. ..|..
T Consensus 238 ~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 238 TKEQIFNNPRHPYTQ 252 (327)
T ss_pred CHHHHhcCCCCHHHH
Confidence 999998753 34543
No 440
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=363.80 Aligned_cols=219 Identities=26% Similarity=0.401 Sum_probs=184.4
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhh
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQ 442 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 442 (1252)
..|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999974 358999999999999999999999999999999999999999999999999987777777788
Q ss_pred ceEEccCCCCch-hcHHHHHhcCCCCC-----CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 443 IGLVNQEPALFA-TTILENILYGKPEA-----TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 443 i~~v~Q~~~l~~-~tv~~ni~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
++|++|++.++. .|++||+.++.... ...+.. ...+.+.++.+ |++......+.+||||||||++|||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lar 156 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED----EEAVTKAMQAT--GITHLADQSVDTLSGGQRQRAWIAM 156 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHH----HHHHHHHHHHc--CCHHHhcCCcccCChHHHHHHHHHH
Confidence 999999998875 59999998752110 000000 01112233333 5555566778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
|++.+|+++||||||++||+.+++.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999999999999999998753 7899999999998866 89999999999999999988754
No 441
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=365.30 Aligned_cols=220 Identities=25% Similarity=0.423 Sum_probs=182.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999974 348999999999999999999999999999999999987 699999999998853 344
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCC--CCCHHH-HHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKP--EATMAE-VEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
..++++++|++|++.+|..|++||+.++.. ....++ .... +.+.++.+ ..++....++.+.+||||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qr 175 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEI-----VEKSLRGAAIWDELKDRLHDNAYGLSGGQQQR 175 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCcchHHHHHhcCcccCCHHHHHH
Confidence 567788999999999998899999987531 111111 1111 11111111 1133445567888999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 176 v~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 255 (271)
T PRK14238 176 LCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFS 255 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998778999999999999866 89999999999999999998865
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
.
T Consensus 256 ~ 256 (271)
T PRK14238 256 N 256 (271)
T ss_pred C
Confidence 4
No 442
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=363.65 Aligned_cols=222 Identities=23% Similarity=0.423 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHH-hhh
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWL-RDQ 442 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~-~~~ 442 (1252)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 358999999999999999999999999999999999999999999999999887765544 446
Q ss_pred ceEEccCCCCchh-cHHHHHhcCCCCCC----------HHHH--HHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 443 IGLVNQEPALFAT-TILENILYGKPEAT----------MAEV--EAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 443 i~~v~Q~~~l~~~-tv~~ni~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
++|++|++.++.. |++||+.++..... .... ........+.+.++.+ |+....+..+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999876 99999997531100 0000 0000111223445555 777777888999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
||++||||++.+|++|||||||++||+.+++.+.+.|.++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999998753 7899999999999866 8999999999999999988
Q ss_pred HHHh
Q 000856 587 ELIA 590 (1252)
Q Consensus 587 ~l~~ 590 (1252)
++..
T Consensus 240 ~~~~ 243 (255)
T PRK11300 240 EIRN 243 (255)
T ss_pred HHhh
Confidence 8754
No 443
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=362.12 Aligned_cols=220 Identities=31% Similarity=0.455 Sum_probs=181.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcc---cCC--CCcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERF---YDP--NAGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~---~~~--~~G~i~~~g~~~~~~--~~ 436 (1252)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999964 3589999999999999999999999999999999997 454 589999999998653 34
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
..++++++|++|++.+++.|++||+.++.... ..++.... +.+.++.+ +..+.+..++.+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQR-----VEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 56778899999999999889999998753211 11111111 11222222 1112344567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999998778999999999999865 89999999999999999999865
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
.
T Consensus 235 ~ 235 (250)
T PRK14245 235 N 235 (250)
T ss_pred C
Confidence 4
No 444
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=365.89 Aligned_cols=218 Identities=31% Similarity=0.504 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC--CCHHHHhhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT--LQLRWLRDQ 442 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~~~~ 442 (1252)
++++|++++|++ ..++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999963 2358999999999999999999999999999999999999999999999998852 233456788
Q ss_pred ceEEccCC--CCchhcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 443 IGLVNQEP--ALFATTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 443 i~~v~Q~~--~l~~~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
|+|++|++ .+++.|++||+.++... ....+... .+.+.++.+ |+.......+.+||||||||++||||+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999997 46778999999875321 11111111 112333333 555555667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+.+|+++||||||++||+.++..+.+.|.++. +|.|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999885 48999999999999875 899999999999999999987653
No 445
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.5e-40 Score=355.53 Aligned_cols=205 Identities=33% Similarity=0.520 Sum_probs=169.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 441 (1252)
++++|++++|++ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 23589999999999999999999999999999999999999999999999998776543 4667
Q ss_pred hceEEccCCCCch-hcHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 442 QIGLVNQEPALFA-TTILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~-~tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
.++|++|++.+|. .|++||+.++... ........ .+.+.++.+ |+.........+||||||||++|||||
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al 152 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQR-----RVGAALRQV--GLEHKADAFPEQLSGGEQQRVAIARAI 152 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 8999999999886 5999999875211 11111111 112233333 444445556679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCE
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQ 578 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~ 578 (1252)
+.+|+++||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||++++|++|+
T Consensus 153 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 153 VNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred hCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999875 48999999999999976 89999999985
No 446
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=359.94 Aligned_cols=215 Identities=27% Similarity=0.458 Sum_probs=181.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC------CCHHH
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT------LQLRW 438 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~------~~~~~ 438 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999964 358999999999999999999999999999999999999999999999998731 23356
Q ss_pred HhhhceEEccCCCCchh-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 439 LRDQIGLVNQEPALFAT-TILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 439 ~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
++++++|++|++.++.+ |++||+.++.. .....+.. ..+.+.++.+ |++...+..+.+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 67889999999998875 99999974311 11111111 1223445554 67667777888999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 515 ARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 515 ARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
|||++.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 999999999999999999999999999999999885 48999999999999965 8999999999999999988764
No 447
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=361.02 Aligned_cols=202 Identities=30% Similarity=0.474 Sum_probs=173.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 3599999999999999999999999999999999999999999999999998642 34689
Q ss_pred EEccccccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGKE--GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~~--~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
|+||++.+|. .|+++|+.++.. ... ++++.++++..++.+.... ...+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999886 699999986421 112 2346667777777554332 235799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEe--CCEEEEecCh
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQ--DGRIVEQGSH 1230 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~--~G~Ive~G~~ 1230 (1252)
|+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|+|++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999873 38999999999998854 89999998 5999998764
No 448
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=363.20 Aligned_cols=220 Identities=30% Similarity=0.452 Sum_probs=183.5
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--C
Q 000856 362 NGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--L 434 (1252)
Q Consensus 362 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~ 434 (1252)
...|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 346999999999963 458999999999999999999999999999999999997 589999999998854 3
Q ss_pred CHHHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHH----HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChH
Q 000856 435 QLRWLRDQIGLVNQEPALFATTILENILYGKPEA---TMA----EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGG 507 (1252)
Q Consensus 435 ~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgG 507 (1252)
+...+++.++|++|++.+|..|++||+.++.... ..+ ++.++++..++. +++++..++.+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALW-------DQVKDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCC-------chhhhhhcCCcccCCHH
Confidence 3456678899999999999889999998753211 111 122222222221 12234567788899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 508 QKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 508 qkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
||||++||||++++|+++||||||++||+.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 8999999999999999999
Q ss_pred HHHhc
Q 000856 587 ELIAK 591 (1252)
Q Consensus 587 ~l~~~ 591 (1252)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 88653
No 449
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1e-39 Score=355.09 Aligned_cols=206 Identities=32% Similarity=0.506 Sum_probs=171.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH---HHHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL---RWLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~---~~~~~ 441 (1252)
++++|++++|++. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4689999999642 358999999999999999999999999999999999999999999999999876653 34677
Q ss_pred hceEEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 442 QIGLVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
.++|++|++.+++. |++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999998875 999999875321 11111111 112333333 555555666779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEE
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQV 579 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i 579 (1252)
+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 58999999999999976 899999999974
No 450
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.2e-40 Score=355.23 Aligned_cols=202 Identities=30% Similarity=0.464 Sum_probs=166.3
Q ss_pred EEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceE
Q 000856 366 EFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGL 445 (1252)
Q Consensus 366 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 445 (1252)
+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999964 35899999999999999999999999999999999999999999999998764 35678999
Q ss_pred EccCCCC---chhcHHHHHhcCCCCC------CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000856 446 VNQEPAL---FATTILENILYGKPEA------TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIAR 516 (1252)
Q Consensus 446 v~Q~~~l---~~~tv~~ni~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lAR 516 (1252)
++|++.+ ++.|++||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADK-----AKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHH-----HHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999876 4579999998764311 001111 1122333333 4554556677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 517 AMLKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 517 al~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
||+.+|+++||||||++||+.+++.+.+.|+++. +++|+|++||+++++.. ||++++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999875 58999999999999876 8999999886 55543
No 451
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-40 Score=344.68 Aligned_cols=225 Identities=37% Similarity=0.629 Sum_probs=197.0
Q ss_pred cEEEEeEEEECCCCCC---------------------ccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCc
Q 000856 1009 EIELRHVDFAYPSRPD---------------------VVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAG 1067 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~---------------------~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G 1067 (1252)
.|+++||+.-+..++. ..-++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5888888887754321 1247999999999999999999999999999999999999999
Q ss_pred eEEECCcccCCCCHHHHh----cccEEEccccccCc-ccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCC
Q 000856 1068 KVMIDGKDIRRLNLKSLR----LKIGLVQQEPALFA-ASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPN 1136 (1252)
Q Consensus 1068 ~I~idG~di~~~~~~~lR----~~i~~VpQd~~lf~-gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~ 1136 (1252)
+|++||.|+..++.++|| +++++|+|..-||+ .||.||..||.. .. .++...++++.+||.+|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 999999999999988764 57999999998884 699999999843 22 2445688899999999988877
Q ss_pred cCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhh-hcc
Q 000856 1137 AYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTI-RGV 1213 (1252)
Q Consensus 1137 gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti-~~~ 1213 (1252)
..||||+|||+.|||||..+|+||++|||.|+|||--...+|+.|.++.+ .+|+++|||++++. +--
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 36999999999999999999999999999999999999999999987643 78999999999976 556
Q ss_pred CEEEEEeCCEEEEecChhhhhcCCCchhHHH
Q 000856 1214 DCIGVVQDGRIVEQGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1214 DrI~vl~~G~Ive~G~~~eLl~~~~g~y~~l 1244 (1252)
|||..|++|+|++.|||+|++.+|..-|-+-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~ 263 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRD 263 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHH
Confidence 9999999999999999999999887777543
No 452
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=364.67 Aligned_cols=220 Identities=33% Similarity=0.488 Sum_probs=183.1
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--C
Q 000856 362 NGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--L 434 (1252)
Q Consensus 362 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~ 434 (1252)
.+.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999964 3589999999999999999999999999999999999884 89999999998864 3
Q ss_pred CHHHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHH----HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChH
Q 000856 435 QLRWLRDQIGLVNQEPALFATTILENILYGKPEA---TMA----EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGG 507 (1252)
Q Consensus 435 ~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgG 507 (1252)
+...+++.++|++|++.+|+.|++||+.++.... ..+ ++..+++..++.+ .+.+..++.+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWD-------EVKDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCh-------hHHHHhhCCcccCCHH
Confidence 4556788999999999999889999998753211 111 1222222222211 1223557778899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 508 QKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 508 qkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
||||++|||||+++|+++||||||++||+.+++.+.+.|+++.++.|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 8999999999999999998
Q ss_pred HHHhc
Q 000856 587 ELIAK 591 (1252)
Q Consensus 587 ~l~~~ 591 (1252)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 87643
No 453
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.6e-39 Score=339.95 Aligned_cols=172 Identities=41% Similarity=0.697 Sum_probs=160.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++. +..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 245899999999999999999999999999999999999999999999999998888778888999
Q ss_pred EEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 000856 445 LVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKI 524 (1252)
Q Consensus 445 ~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~i 524 (1252)
|++|++.+++.|++||+ ||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999988999997 999999999999999999999
Q ss_pred EEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhccCEEEEEeCCEE
Q 000856 525 LLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRNVDTVAVIQQGQV 579 (1252)
Q Consensus 525 lllDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~i 579 (1252)
+||||||++||+.+++.+.+.++++. +|+|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999875 48999999999999887999999999974
No 454
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.2e-39 Score=353.33 Aligned_cols=204 Identities=31% Similarity=0.477 Sum_probs=176.1
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHH---HHh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLK---SLR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1085 (1252)
++++|++++|++.. +.++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 24699999999999999999999999999999999999999999999999999876643 468
Q ss_pred cccEEEccccccCc-ccHHHHhccCCC---CCC----HHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHH
Q 000856 1086 LKIGLVQQEPALFA-ASIFDNIAYGKE---GAT----EAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRI 1157 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~-gTIreNl~~~~~---~~~----deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrl 1157 (1252)
+.++|+||++.+|. .|+.+|+.++.. ..+ ++.+.++++..++.++....| ..||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 699999986421 122 234566777777766555443 47999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhccCEEEEEeCCEE
Q 000856 1158 AIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRGVDCIGVVQDGRI 1224 (1252)
Q Consensus 1158 aLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~~DrI~vl~~G~I 1224 (1252)
+||||++++|++|||||||++||+++...+.+.|++..+ ++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998763 7999999999998778999999999986
No 455
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=372.77 Aligned_cols=227 Identities=25% Similarity=0.358 Sum_probs=180.7
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC----CCCcEEEECCccccCCCHHH
Q 000856 364 NIEFKNVTFSYPSRPD-VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD----PNAGHVLLDNVDIKTLQLRW 438 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 438 (1252)
.++++|++++|+.... ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++...+.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975322 458999999999999999999999999999999999997 48999999999998877655
Q ss_pred Hh----hhceEEccCCC--Cchh-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCcc---ccccCCCCCCC
Q 000856 439 LR----DQIGLVNQEPA--LFAT-TILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYS---TQVGERGVQLS 505 (1252)
Q Consensus 439 ~~----~~i~~v~Q~~~--l~~~-tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~g~~LS 505 (1252)
++ +.|+||+|+|. +.+. |+.+++..... .....+.. ..+.+.++.+ |++ ...++.+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 43 36999999984 4432 66665542110 11111111 1112333333 443 34567888999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEe
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVET 582 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 582 (1252)
|||||||+|||||+.+|++||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||||++|.+|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999999985 38999999999999965 899999999999999
Q ss_pred cChHHHHhcc-cchHH
Q 000856 583 GTHEELIAKA-GAYAS 597 (1252)
Q Consensus 583 g~~~~l~~~~-~~~~~ 597 (1252)
|+.+++.++. ..|..
T Consensus 236 g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQ 251 (326)
T ss_pred CCHHHHhhCCCChHHH
Confidence 9999998653 34543
No 456
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.5e-39 Score=362.96 Aligned_cols=221 Identities=29% Similarity=0.422 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999964 35999999999999999999999999999999999999999999999999998887777777899
Q ss_pred EEccCCCCc-hhcHHHHHhcCCCCCCHH-HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 445 LVNQEPALF-ATTILENILYGKPEATMA-EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 445 ~v~Q~~~l~-~~tv~~ni~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
|++|++.++ ..|++||+.++....... ..........+.+.+..+ |+.......+.+||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999998654 569999998763211000 000000011223344444 5555566778899999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
+++||||||++||+.+.+.+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999885 47899999999999965 89999999999999999988754
No 457
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=361.74 Aligned_cols=218 Identities=29% Similarity=0.447 Sum_probs=182.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 436 (1252)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999964 358999999999999999999999999999999999986 489999999998853 345
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC--C---HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA--T---MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
..++++++|++|++.+++.|++||+.++.... . .++...+++.+++.+.+ ....++.+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 66778899999999998889999998764211 1 11222233333332222 223466788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEe---------CCEEEE
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQ---------QGQVVE 581 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~---------~G~i~~ 581 (1252)
++|||||+.+|+++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999866 89999998 899999
Q ss_pred ecChHHHHhc
Q 000856 582 TGTHEELIAK 591 (1252)
Q Consensus 582 ~g~~~~l~~~ 591 (1252)
.|+++++.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999998654
No 458
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-40 Score=354.26 Aligned_cols=205 Identities=25% Similarity=0.481 Sum_probs=173.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++ ..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 358999999999999999999999999999999999999999999999988753 4567899
Q ss_pred EEccCCCCchh-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFAT-TILENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++.. |++||+.+.... ....+.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 999999864211 1111111 1223445555 666666777889999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|+++||||||++||+.+++.+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 47899999999999866 8999999999998754
No 459
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=362.30 Aligned_cols=220 Identities=29% Similarity=0.437 Sum_probs=180.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC--C---CCcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD--P---NAGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~~--~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999974 348999999999999999999999999999999999853 6 599999999988643 34
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPE---ATMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQR 511 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqR 511 (1252)
..+++.++|++|++.+|+.|++||+.++... ...+..... +.+.++.+ ..++.+..++.+.+||||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEA-----VEKSLKGASIWDEVKDRLHDSALGLSGGQQQR 156 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCchhHHHHHhcCcccCCHHHHHH
Confidence 4567789999999999989999999865211 111111111 11222222 1112344567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHh
Q 000856 512 IAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIA 590 (1252)
Q Consensus 512 v~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 590 (1252)
++|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 157 VCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988767999999999998865 89999999999999999998865
Q ss_pred c
Q 000856 591 K 591 (1252)
Q Consensus 591 ~ 591 (1252)
.
T Consensus 237 ~ 237 (252)
T PRK14239 237 N 237 (252)
T ss_pred C
Confidence 4
No 460
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.6e-39 Score=351.37 Aligned_cols=210 Identities=32% Similarity=0.480 Sum_probs=183.5
Q ss_pred EEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCH----HHHhh
Q 000856 366 EFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQL----RWLRD 441 (1252)
Q Consensus 366 ~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~----~~~~~ 441 (1252)
.+.|++|+|+.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 458999999999999999999999999999999999999999999999998865432 23456
Q ss_pred hceEEccCCCCchhcHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 442 QIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 442 ~i~~v~Q~~~l~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
.++|++|++.+++.|++||+.++.+ ...++...+++..++.+.+..+|.|+++..+..+.+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 7999999999998899999998653 234455667777777788888899999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHH--HHHHhc-CCCeEEEEccCccchhccCEEEEEeCCE
Q 000856 522 PKILLLDEATSALDAGSESIVQE--ALDRLM-VGRTTVVVAHRLSTIRNVDTVAVIQQGQ 578 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~--~l~~~~-~~~tvi~itH~~~~~~~~d~i~~l~~G~ 578 (1252)
|+++||||||++||+.+++.+.+ .++.+. .+.|+|++||+++.+..||++++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 555554 3799999999999998899999999873
No 461
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-40 Score=323.81 Aligned_cols=213 Identities=31% Similarity=0.539 Sum_probs=185.0
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
+++.+++.+|++ ...+++||||+++.||++||.|+|||||||+++.|..|+.|++|.|++||+|+.. ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999974 3358999999999999999999999999999999999999999999999999987 4567899999
Q ss_pred EEccccccC-cccHHHHhccCCC--CC----CHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHH
Q 000856 1090 LVQQEPALF-AASIFDNIAYGKE--GA----TEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1090 ~VpQd~~lf-~gTIreNl~~~~~--~~----~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARA 1162 (1252)
+++-+.-++ ..|.||||.|+.. +. .+.++.+.-+..++.+... ..+| +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-------rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-------RRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-------HHHh----hhchhhHHHHHHHHH
Confidence 999776676 4699999987521 12 2344555556666665543 4454 599999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhhhhcC
Q 000856 1163 VLKNPAILLLDEATSALDAESECVLQEALERLMR-GRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSELVSR 1236 (1252)
Q Consensus 1163 Ll~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~-~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~eLl~~ 1236 (1252)
|+++|+|++||||||+||.-+...+++.+.+..+ |++||+-||.++.++ -||||+++.+|+++..|+++++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999999875 999999999999997 6999999999999999999998765
No 462
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.2e-39 Score=354.12 Aligned_cols=208 Identities=27% Similarity=0.454 Sum_probs=173.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HHhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WLRD 441 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~~~ 441 (1252)
|+++|++++|++ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 689999999942 23589999999999999999999999999999999999999999999999998776543 3677
Q ss_pred hceEEccCCCCc-hhcHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 442 QIGLVNQEPALF-ATTILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 442 ~i~~v~Q~~~l~-~~tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
.++|++|++.++ +.|++||+.++.. ....++.... +.+.++.+ |+.....+...+||||||||++||||+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 899999999875 5699999987531 1222222111 11233333 454455667789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEE
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVE 581 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~ 581 (1252)
+.+|+++||||||++||+.+++.+.+.|.++. ++.|+|++||+++++.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999875 47999999999999977 79999999999864
No 463
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.6e-39 Score=355.16 Aligned_cols=212 Identities=28% Similarity=0.406 Sum_probs=175.0
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHH---H
Q 000856 364 NIEFKNVTFSYPSRPD-VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRW---L 439 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~-~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~---~ 439 (1252)
.|+++|++++|++... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974221 25899999999999999999999999999999999999999999999999988766543 2
Q ss_pred -hhhceEEccCCCCchh-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 440 -RDQIGLVNQEPALFAT-TILENILYGKP--EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 440 -~~~i~~v~Q~~~l~~~-tv~~ni~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
++.++|++|++.++.. |++||+.++.. .....+.. ..+.+.++.+ |+.........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSR-----NGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3579999999998875 99999986421 11111111 1122334444 555555666789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-C-CCeEEEEccCccchhccCEEEEEeCCEEEEe
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM-V-GRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~-~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
|||+.+|+++||||||++||+.+++.+.+.|+++. + |+|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999874 3 7899999999999877999999999999764
No 464
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=361.02 Aligned_cols=218 Identities=28% Similarity=0.464 Sum_probs=182.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 436 (1252)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3589999999999999999999999999999999999763 489999999998765 34
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHH----HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TMA----EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
...++.++|++|++.+|+.|++||+.++.... ... ++..+++..+ +..++.+..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAA-------LWDEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhc-------CchhhHHHhhcChhhCCHHHH
Confidence 56677899999999999889999998863211 111 1122222221 112233456778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++||||++.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999965 899999999999999999887
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 236 ~~~ 238 (253)
T PRK14261 236 FEN 238 (253)
T ss_pred HhC
Confidence 643
No 465
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.3e-39 Score=356.74 Aligned_cols=205 Identities=26% Similarity=0.435 Sum_probs=169.1
Q ss_pred EEEEeEEEECCCCC-CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCC---CCCceEEECCcccCCCCHHHHh
Q 000856 1010 IELRHVDFAYPSRP-DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYD---PTAGKVMIDGKDIRRLNLKSLR 1085 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~---p~~G~I~idG~di~~~~~~~lR 1085 (1252)
++|+||+++|++.. .+++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999997532 2579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEccccccCcc-cHHHHhccCCC----CCCHHH-----HHH-HHHHcCchhhHhhCCCcCCCccCCCCCCCChhHH
Q 000856 1086 LKIGLVQQEPALFAA-SIFDNIAYGKE----GATEAE-----VVE-AARAANVHGFVSALPNAYKTPVGERGVQLSGGQK 1154 (1252)
Q Consensus 1086 ~~i~~VpQd~~lf~g-TIreNl~~~~~----~~~dee-----i~~-al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQr 1154 (1252)
++++|+||++.+|.+ |++||+.++.. ....++ +.+ .++..++. .........||||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALT-----------RIGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcch-----------hhhcccccCcCHHHH
Confidence 899999999999987 99999986421 111111 111 23333322 222234467999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCc-hhh-hccCEEEEEeCCEEEEec
Q 000856 1155 QRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRL-STI-RGVDCIGVVQDGRIVEQG 1228 (1252)
Q Consensus 1155 QrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl-~ti-~~~DrI~vl~~G~Ive~G 1228 (1252)
||++|||||+++|++|||||||++||+.+...+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999999875 478999999998 455 568999999999999875
No 466
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.9e-39 Score=362.20 Aligned_cols=223 Identities=27% Similarity=0.444 Sum_probs=182.9
Q ss_pred EEEEeEEEECCCC------CCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCH--
Q 000856 1010 IELRHVDFAYPSR------PDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL-- 1081 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~-- 1081 (1252)
|+++||+++|+.. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8899999999631 12469999999999999999999999999999999999999999999999999987765
Q ss_pred -HHHhcccEEEccccc--cC-cccHHHHhccCCC---CCCH----HHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCC
Q 000856 1082 -KSLRLKIGLVQQEPA--LF-AASIFDNIAYGKE---GATE----AEVVEAARAANVHGFVSALPNAYKTPVGERGVQLS 1150 (1252)
Q Consensus 1082 -~~lR~~i~~VpQd~~--lf-~gTIreNl~~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gldt~vge~G~~LS 1150 (1252)
..+|+.++|+||++. ++ ..|+++|+.+... ..+. +.+.++++..++.. .........||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 153 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDD----------SVLDKRPPQLS 153 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCCh----------hHhhCCCccCC
Confidence 346889999999983 33 4799999864211 1111 22344444444321 12334456799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhc-cCEEEEEeCCEEEEe
Q 000856 1151 GGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIRG-VDCIGVVQDGRIVEQ 1227 (1252)
Q Consensus 1151 gGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive~ 1227 (1252)
||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 154 ~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~ 233 (268)
T PRK10419 154 GGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVET 233 (268)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeee
Confidence 9999999999999999999999999999999999999999998753 7899999999999974 899999999999999
Q ss_pred cChhhhhcCCCchhHH
Q 000856 1228 GSHSELVSRPDGAYSR 1243 (1252)
Q Consensus 1228 G~~~eLl~~~~g~y~~ 1243 (1252)
|+++++.+. ++.|..
T Consensus 234 g~~~~~~~~-~~~~~~ 248 (268)
T PRK10419 234 QPVGDKLTF-SSPAGR 248 (268)
T ss_pred CChhhccCC-CCHHHH
Confidence 999999865 555543
No 467
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=360.37 Aligned_cols=218 Identities=32% Similarity=0.477 Sum_probs=180.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~~ 436 (1252)
.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999964 358999999999999999999999999999999999997 489999999998854 334
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHhhCCCCc----cccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TMAEVEAAASAANAHSFITLLPNGY----STQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~g~~LSgGqk 509 (1252)
..+++.++|++|++.+|+.|++||+.++.... ..+..... +.+.++.+ |+ ....++.+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQR-----VEESLKQA--AIWKETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHH-----HHHHHHHc--CCCcchHHHhccChhhCCHHHH
Confidence 55677899999999999889999998753211 11111111 11222222 22 1234567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++||||++++|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999866 899999999999999999888
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 643
No 468
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9.2e-40 Score=313.21 Aligned_cols=193 Identities=30% Similarity=0.512 Sum_probs=172.6
Q ss_pred CccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccEEEccccccCcccHH
Q 000856 1024 DVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIF 1103 (1252)
Q Consensus 1024 ~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~lf~gTIr 1103 (1252)
+.++|+|+||++.+||.++|.||||||||||++.++-+..|++|++++.|.|++.++++.+|++++||-|.|.||.+||.
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVe 94 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVE 94 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchh
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCC----CCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCEEEEeccCCCC
Q 000856 1104 DNIAYGK----EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSAL 1179 (1252)
Q Consensus 1104 eNl~~~~----~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ILiLDEpTS~L 1179 (1252)
||+-|.- ...+.+...+.++++++.+.+ +..+..+||||||||+||+|-|.--|+||+|||+||+|
T Consensus 95 DNlifP~~~r~rr~dr~aa~~llar~~l~~~~----------L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 95 DNLIFPWQIRNRRPDRAAALDLLARFALPDSI----------LTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hccccchHHhccCCChHHHHHHHHHcCCchhh----------hcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 9998752 223445556777777776554 23345679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc--CCCeEEEEecCchh-hhccCEEEEEeCCEEEE
Q 000856 1180 DAESECVLQEALERLM--RGRTTVLVAHRLST-IRGVDCIGVVQDGRIVE 1226 (1252)
Q Consensus 1180 D~~te~~i~~~l~~~~--~~~TvI~IaHrl~t-i~~~DrI~vl~~G~Ive 1226 (1252)
|+.+.+.|.+.|.+++ ++..++.|||+.+. ++.+|+++.+..|++-+
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999887 46799999999987 78999999999998643
No 469
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=374.72 Aligned_cols=211 Identities=30% Similarity=0.480 Sum_probs=179.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCC----CHHHHh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTL----QLRWLR 440 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~----~~~~~~ 440 (1252)
|++ |++++|++. .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....+
T Consensus 2 l~~-~l~k~~~~~----~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGDL----CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCCE----EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 566 999999632 23 89999999999999999999999999999999999999999999988643 233456
Q ss_pred hhceEEccCCCCchh-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 000856 441 DQIGLVNQEPALFAT-TILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAML 519 (1252)
Q Consensus 441 ~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~ 519 (1252)
++++|++|++.+|+. |++||+.++......+++. +.++.+ |++....+.+.+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~---------~~l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFD---------KIVALL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHH---------HHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 789999999999975 9999999875322222222 333333 5665667778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhcc
Q 000856 520 KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAKA 592 (1252)
Q Consensus 520 ~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 592 (1252)
.+|+++||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++..+.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999998753 7899999999998866 8999999999999999999997653
No 470
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.7e-39 Score=372.06 Aligned_cols=230 Identities=25% Similarity=0.409 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC---CcEEEECCccccCCCHHHH
Q 000856 364 NIEFKNVTFSYPSR-PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN---AGHVLLDNVDIKTLQLRWL 439 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~ 439 (1252)
.++++|++++|+.. ....+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++..++...+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999642 2346899999999999999999999999999999999999996 9999999999988876654
Q ss_pred h----hhceEEccCC--CCchh-cHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 440 R----DQIGLVNQEP--ALFAT-TILENILYGK---PEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 440 ~----~~i~~v~Q~~--~l~~~-tv~~ni~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
+ +.|+||+|+| .+++. |+.+|+.... ...+..+.... ...+.+.+ .++++. ..++..+.+||||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~--~~~~L~~v-gL~~~~-~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE--SVRMLDAV-KMPEAR-KRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH--HHHHHHHc-CCCChH-HHhcCCcccCCHHHH
Confidence 3 4799999998 45543 7888775321 11122221111 11111221 223222 235778899999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
|||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ |.|+|+||||++.+.. ||+|++|++|+|++.|+.+
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998853 8999999999999975 8999999999999999999
Q ss_pred HHHhcc-cchHH
Q 000856 587 ELIAKA-GAYAS 597 (1252)
Q Consensus 587 ~l~~~~-~~~~~ 597 (1252)
++.+.. ..|..
T Consensus 248 ~i~~~p~~pyt~ 259 (330)
T PRK09473 248 DVFYQPSHPYSI 259 (330)
T ss_pred HHHhCCCCHHHH
Confidence 998753 34544
No 471
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=359.69 Aligned_cols=217 Identities=29% Similarity=0.480 Sum_probs=181.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCcccc-CCCHH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIK-TLQLR 437 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~-~~~~~ 437 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4789999999973 3589999999999999999999999999999999999986 5999999999885 34556
Q ss_pred HHhhhceEEccCCCCchhcHHHHHhcCCCC--CC-HHH----HHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHH
Q 000856 438 WLRDQIGLVNQEPALFATTILENILYGKPE--AT-MAE----VEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 438 ~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~~-~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkq 510 (1252)
.+++.++|++|++.+|..|++||+.++... .. .+. +..+++..++. +++.+..++.+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALW-------DEVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCc-------hhhhHHhhcCcccCCHHHHH
Confidence 778889999999999989999999875321 11 111 11222222221 12234456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
|++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 8999999999999999988775
Q ss_pred h
Q 000856 590 A 590 (1252)
Q Consensus 590 ~ 590 (1252)
.
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 4
No 472
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.2e-39 Score=354.18 Aligned_cols=205 Identities=35% Similarity=0.561 Sum_probs=172.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccC--CCHHHHhhh
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKT--LQLRWLRDQ 442 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~--~~~~~~~~~ 442 (1252)
++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 358999999999999999999999999999999999999999999999998853 344566788
Q ss_pred ceEEccCCCCch-hcHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 000856 443 IGLVNQEPALFA-TTILENILYGKP---EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAM 518 (1252)
Q Consensus 443 i~~v~Q~~~l~~-~tv~~ni~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal 518 (1252)
++|++|++.++. .|++||+.++.. ....++... .+.+.++.+ |++........+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 599999987531 111211111 123344444 666667778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEE
Q 000856 519 LKNPKILLLDEATSALDAGSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQV 579 (1252)
Q Consensus 519 ~~~~~illlDEpts~LD~~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i 579 (1252)
+.+|+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999885 47999999999999976 899999999974
No 473
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=359.77 Aligned_cols=220 Identities=30% Similarity=0.505 Sum_probs=181.0
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC--C---CCcEEEECCccccCC--
Q 000856 362 NGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD--P---NAGHVLLDNVDIKTL-- 434 (1252)
Q Consensus 362 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~--~---~~G~i~~~g~~~~~~-- 434 (1252)
++.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 356899999999973 358999999999999999999999999999999999986 4 689999999988643
Q ss_pred CHHHHhhhceEEccCCCCchh-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhCCCCcc----ccccCCCCCCCh
Q 000856 435 QLRWLRDQIGLVNQEPALFAT-TILENILYGKPE---ATMAEVEAAASAANAHSFITLLPNGYS----TQVGERGVQLSG 506 (1252)
Q Consensus 435 ~~~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~g~~LSg 506 (1252)
+...+++.++|++|++.++.. |++||+.++... ....+.... +.+.++.+ |++ ...+..+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEI-----VESSLKRV--ALWDEVKDRLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHc--CCchhhhHHhhCCcCcCCH
Confidence 345677889999999998874 999999865211 111111111 11222222 222 234567889999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecCh
Q 000856 507 GQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTH 585 (1252)
Q Consensus 507 GqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~ 585 (1252)
|||||++||||++.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999865 899999999999999999
Q ss_pred HHHHhc
Q 000856 586 EELIAK 591 (1252)
Q Consensus 586 ~~l~~~ 591 (1252)
+++...
T Consensus 232 ~~~~~~ 237 (252)
T PRK14256 232 KKIFTT 237 (252)
T ss_pred HHHHhC
Confidence 988654
No 474
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.5e-39 Score=370.64 Aligned_cols=204 Identities=24% Similarity=0.404 Sum_probs=173.0
Q ss_pred CccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhceEEccCCCCchh-cHH
Q 000856 380 VIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFAT-TIL 458 (1252)
Q Consensus 380 ~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~-tv~ 458 (1252)
..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....++++++|++|++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 358999999999999999999999999999999999999999999999998865 344567789999999998876 999
Q ss_pred HHHhcCCCC--CCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCh
Q 000856 459 ENILYGKPE--ATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDA 536 (1252)
Q Consensus 459 ~ni~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~ 536 (1252)
||+.+.... ....+... .+.+.++.+ |+.........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 999864211 11111111 122344444 555556777889999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhc-CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 537 GSESIVQEALDRLM-VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 537 ~~~~~~~~~l~~~~-~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
.+++.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999885 48999999999999976 899999999999999999988654
No 475
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=362.78 Aligned_cols=220 Identities=30% Similarity=0.490 Sum_probs=183.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCCC-HH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTLQ-LR 437 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~~-~~ 437 (1252)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999974 3589999999999999999999999999999999999986 7999999999887653 34
Q ss_pred HHhhhceEEccCCCCchhcHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHHHH
Q 000856 438 WLRDQIGLVNQEPALFATTILENILYGKPE---ATMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQRI 512 (1252)
Q Consensus 438 ~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkqRv 512 (1252)
.+++.++|++|++.+|+.|+++|+.++... ....+..... .+.++.+ ...+.+..++.+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 567889999999999989999999875321 1222222111 1222222 11122345677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 513 AIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 513 ~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+|||||+.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988667899999999999876 899999999999999999998654
No 476
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=359.17 Aligned_cols=218 Identities=31% Similarity=0.449 Sum_probs=181.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3489999999999999999999999999999999999875 799999999998643 33
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCCC---CHH----HHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPEA---TMA----EVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
..+++.++|++|++.+++.|++||+.++.... ... ++..+++.+++. .++....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALW-------DEVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCc-------hhhhhHhhCCcccCCHHHH
Confidence 45677899999999999899999998753211 111 122222222221 1222345667889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++||||++.+|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767999999999999876 899999999999999999988
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 654
No 477
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=362.00 Aligned_cols=217 Identities=30% Similarity=0.506 Sum_probs=179.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccCCC--HH
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKTLQ--LR 437 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~~--~~ 437 (1252)
-+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 358999999999999999999999999999999999986 47999999999886543 23
Q ss_pred HHhhhceEEccCCCCchhcHHHHHhcCCC--CC--CHHHHHHHHHHhcHHHHHhhCCCCcc----ccccCCCCCCChHHH
Q 000856 438 WLRDQIGLVNQEPALFATTILENILYGKP--EA--TMAEVEAAASAANAHSFITLLPNGYS----TQVGERGVQLSGGQK 509 (1252)
Q Consensus 438 ~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~g~~LSgGqk 509 (1252)
.+++.++|++|++.+|+.|++||+.++.. .. ...+... .+.+.++.+ |+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDE-----IVEKSLTSV--GLWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHH-----HHHHHHHHc--CCCchhhhHhhcChhhCCHHHH
Confidence 56778999999999998899999987521 10 1111111 112223333 332 245667889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++|||||+++|+++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 899999999999999999888
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
.+.
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 654
No 478
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=360.60 Aligned_cols=221 Identities=24% Similarity=0.377 Sum_probs=183.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC--------CcEEEECCccccCCCH
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN--------AGHVLLDNVDIKTLQL 436 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~--------~G~i~~~g~~~~~~~~ 436 (1252)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 689999999964 35899999999999999999999999999999999999998 9999999999887777
Q ss_pred HHHhhhceEEccCCC-CchhcHHHHHhcCCCCC-CHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHH
Q 000856 437 RWLRDQIGLVNQEPA-LFATTILENILYGKPEA-TMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAI 514 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~-l~~~tv~~ni~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~l 514 (1252)
..+++.++|++|++. ++..|++||+.++.... .............+.+.++.+ |+.+..++.+.+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 777778999999986 46679999998753111 000000000011122344444 67777788889999999999999
Q ss_pred HHHhc---------cCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEe
Q 000856 515 ARAML---------KNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVET 582 (1252)
Q Consensus 515 ARal~---------~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~ 582 (1252)
||||+ .+|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 59999999999999999999999999998753 7999999999999965 899999999999999
Q ss_pred cChHHHHh
Q 000856 583 GTHEELIA 590 (1252)
Q Consensus 583 g~~~~l~~ 590 (1252)
|+++++..
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99988754
No 479
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.8e-39 Score=356.67 Aligned_cols=223 Identities=26% Similarity=0.419 Sum_probs=181.9
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcc-----cCCCCHHH
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKD-----IRRLNLKS 1083 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~d-----i~~~~~~~ 1083 (1252)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYGG---GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeCC---ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999988 77666553
Q ss_pred ----HhcccEEEccccc--c-CcccHHHHhccC-----CCC--CCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCC
Q 000856 1084 ----LRLKIGLVQQEPA--L-FAASIFDNIAYG-----KEG--ATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQL 1149 (1252)
Q Consensus 1084 ----lR~~i~~VpQd~~--l-f~gTIreNl~~~-----~~~--~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~L 1149 (1252)
+++.++|++|++. + +..|+.+|+... ... ..++++.+.++..++.+ +........|
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~L 149 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAF 149 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhc
Confidence 3467999999984 2 345888887531 111 11234444444444421 2233445679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhc-cCEEEEEeCCEEEE
Q 000856 1150 SGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLM--RGRTTVLVAHRLSTIRG-VDCIGVVQDGRIVE 1226 (1252)
Q Consensus 1150 SgGQrQrlaLARALl~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrI~vl~~G~Ive 1226 (1252)
|||||||++|||||+++|++|||||||++||+.+...+.+.|++.. .+.|+|+|||+++.+.. ||++++|++|++++
T Consensus 150 SgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~ 229 (253)
T TIGR02323 150 SGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVE 229 (253)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998864 37899999999999974 89999999999999
Q ss_pred ecChhhhhcCCCchhHHH
Q 000856 1227 QGSHSELVSRPDGAYSRL 1244 (1252)
Q Consensus 1227 ~G~~~eLl~~~~g~y~~l 1244 (1252)
.|+++++..++...|.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 230 SGLTDQVLDDPQHPYTQL 247 (253)
T ss_pred ECCHHHHhcCCCCHHHHH
Confidence 999999987655555544
No 480
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.9e-38 Score=409.17 Aligned_cols=212 Identities=26% Similarity=0.372 Sum_probs=151.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHH---------HHhccCCCCC----ce----EEE
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIA---------LIERFYDPTA----GK----VMI 1071 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~---------lL~rl~~p~~----G~----I~i 1071 (1252)
.++++|++. ..|+|+|++|++||.++|+|+||||||||++ .|.|...+.. +. |.|
T Consensus 600 ~L~l~~~~~--------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~i 671 (1809)
T PRK00635 600 TLTLSKATK--------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHI 671 (1809)
T ss_pred eEEEecccc--------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEe
Confidence 478888762 2699999999999999999999999999999 5555432211 12 456
Q ss_pred CCcccCCCC----HH------HHhc---------c-----cEEEccc------------------c--------------
Q 000856 1072 DGKDIRRLN----LK------SLRL---------K-----IGLVQQE------------------P-------------- 1095 (1252)
Q Consensus 1072 dG~di~~~~----~~------~lR~---------~-----i~~VpQd------------------~-------------- 1095 (1252)
|..++..-+ .. .+|+ + ..+.+|. |
T Consensus 672 dQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy 751 (1809)
T PRK00635 672 TRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRF 751 (1809)
T ss_pred cCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCccc
Confidence 655554321 11 3341 1 1122221 0
Q ss_pred ------ccC-cccHHHHhccCCCCC-----CHHHHHHHHHHcCchhhHhhCCCcCCCc-cCCCCCCCChhHHHHHHHHHH
Q 000856 1096 ------ALF-AASIFDNIAYGKEGA-----TEAEVVEAARAANVHGFVSALPNAYKTP-VGERGVQLSGGQKQRIAIARA 1162 (1252)
Q Consensus 1096 ------~lf-~gTIreNl~~~~~~~-----~deei~~al~~~~l~~~i~~lp~gldt~-vge~G~~LSgGQrQrlaLARA 1162 (1252)
..+ .-||.|||.++..++ ..+++.+.++ .++.+ |++.. .+.....||||||||++||||
T Consensus 752 ~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~------~L~~v--GL~~l~l~q~~~tLSGGE~QRV~LAra 823 (1809)
T PRK00635 752 LPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIH------ALCSL--GLDYLPLGRPLSSLSGGEIQRLKLAYE 823 (1809)
T ss_pred CHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHH------HHHHc--CCcchhhcCccccCCHHHHHHHHHHHH
Confidence 122 237888887753211 1223333221 11211 44433 455667899999999999999
Q ss_pred Hc---cCCCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhccCEEEEEe------CCEEEEecChhh
Q 000856 1163 VL---KNPAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIRGVDCIGVVQ------DGRIVEQGSHSE 1232 (1252)
Q Consensus 1163 Ll---~~p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~~~DrI~vl~------~G~Ive~G~~~e 1232 (1252)
|+ ++|++|||||||++||+.+...+.+.|+++. +|.|||+|+|+++.+..||+|++|. +|++++.|+|++
T Consensus 824 L~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpee 903 (1809)
T PRK00635 824 LLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEE 903 (1809)
T ss_pred HhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHH
Confidence 98 5999999999999999999999999999875 5889999999999998899999996 899999999999
Q ss_pred hhcC
Q 000856 1233 LVSR 1236 (1252)
Q Consensus 1233 Ll~~ 1236 (1252)
+.+.
T Consensus 904 l~~~ 907 (1809)
T PRK00635 904 LIHL 907 (1809)
T ss_pred HHhc
Confidence 9864
No 481
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-39 Score=362.57 Aligned_cols=219 Identities=28% Similarity=0.480 Sum_probs=180.1
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccC--CC
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKT--LQ 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~--~~ 435 (1252)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35899999999964 358999999999999999999999999999999999997 689999999998854 34
Q ss_pred HHHHhhhceEEccCCCCchhcHHHHHhcCCCCCC-HHHHHHHHHHhcHHHHHhhCCCCc----cccccCCCCCCChHHHH
Q 000856 436 LRWLRDQIGLVNQEPALFATTILENILYGKPEAT-MAEVEAAASAANAHSFITLLPNGY----STQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~g~~LSgGqkq 510 (1252)
...+++.++|++|++.+|..|++||+.++..... ..+... .+.+.++.+ |+ ....++.+.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~i~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDE-----RVEESLRRA--ALWDEVKDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHH-----HHHHHHHHc--CCCchhHHHHhCCcccCCHHHHH
Confidence 4567788999999999988899999986521100 011111 112223222 22 23456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEE-EEeCCEEEEecChHHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVA-VIQQGQVVETGTHEEL 588 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~-~l~~G~i~~~g~~~~l 588 (1252)
|++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|++++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998767899999999999876 89975 5799999999999887
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
..+
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 543
No 482
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.4e-39 Score=351.89 Aligned_cols=205 Identities=27% Similarity=0.450 Sum_probs=178.7
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.... ++.++
T Consensus 1 l~l~~v~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK---QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 478999999963 36999999999999999999999999999999999999999999999999875422 35799
Q ss_pred EEccccccCc-ccHHHHhccCC--CCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1090 LVQQEPALFA-ASIFDNIAYGK--EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1090 ~VpQd~~lf~-gTIreNl~~~~--~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
|+||++.+|. .|++||+.++. ....++++.++++..++.+..... ...||||||||++||||++++
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcC
Confidence 9999998876 69999997532 123567788888888887654432 246999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEEEEecChhh
Q 000856 1167 PAILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRIVEQGSHSE 1232 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~Ive~G~~~e 1232 (1252)
|++|+|||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|++.+
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999875 4789999999999985 589999999999999998865
No 483
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-39 Score=348.95 Aligned_cols=205 Identities=29% Similarity=0.485 Sum_probs=169.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 4789999999632 2 39999999999999999999999999999999999999999999999876543 346799
Q ss_pred EEccCCCCchh-cHHHHHhcCCCC-CC-HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccC
Q 000856 445 LVNQEPALFAT-TILENILYGKPE-AT-MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKN 521 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~ 521 (1252)
|++|++.++.+ |++||+.++... .. ..+.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~ia~al~~~ 146 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDR-----QAIEVALARV--GLAGLEKRLPGELSGGERQRVALARVLVRD 146 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHH-----HHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999999876 999999876321 11 01100 1112233333 454455566779999999999999999999
Q ss_pred CCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEec
Q 000856 522 PKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETG 583 (1252)
Q Consensus 522 ~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g 583 (1252)
|+++||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 147 KPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999875 38999999999999976 8999999999998754
No 484
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.6e-39 Score=359.13 Aligned_cols=220 Identities=27% Similarity=0.399 Sum_probs=181.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC---CcEEEECCccccCC-----C
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN---AGHVLLDNVDIKTL-----Q 435 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~---~G~i~~~g~~~~~~-----~ 435 (1252)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999964 35899999999999999999999999999999999999986 49999999988643 2
Q ss_pred HHHHhhhceEEccCCCCchh-cHHHHHhcCCCCCCH--HH---HHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 436 LRWLRDQIGLVNQEPALFAT-TILENILYGKPEATM--AE---VEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
...+++.++|++|++.++.. |++||+.++...... .. .........+.+.++.+ |+.......+.+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 34567789999999988875 999999876321100 00 00000111223444444 565556778889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHE 586 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~ 586 (1252)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999885 37999999999998755 8999999999999999998
Q ss_pred HH
Q 000856 587 EL 588 (1252)
Q Consensus 587 ~l 588 (1252)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 485
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=358.42 Aligned_cols=218 Identities=29% Similarity=0.488 Sum_probs=180.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccCC--CH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKTL--QL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~~--~~ 436 (1252)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3589999999999999999999999999999999999984 899999999988643 23
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCC---CCHHH----HHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPE---ATMAE----VEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
..+++.++|++|++.++..|++||+.++... ...++ +..+++..++.+ .++...++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWD-------EVKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCc-------hhHHHHhCChhhcCHHHH
Confidence 4567789999999999889999999875311 11111 122222222111 112345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHH
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEEL 588 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 588 (1252)
||++||||++.+|+++||||||++||+.++..+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998765 899999999999999999888
Q ss_pred Hhc
Q 000856 589 IAK 591 (1252)
Q Consensus 589 ~~~ 591 (1252)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14262 233 VER 235 (250)
T ss_pred HhC
Confidence 653
No 486
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=360.03 Aligned_cols=218 Identities=32% Similarity=0.456 Sum_probs=181.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. ...
T Consensus 7 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 5899999999963 3489999999999999999999999999999999999985 48999999998854 344
Q ss_pred HHHhhhceEEccCCCCchhcHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHH
Q 000856 437 RWLRDQIGLVNQEPALFATTILENILYGKPE---ATM----AEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQK 509 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqk 509 (1252)
..++++++|++|++.+|+.|++||+.++... ... +.+.++++..++.+. +....++.+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQE-------VKDKLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-------hhhHhcCCcccCCHHHH
Confidence 5677889999999999989999999875211 111 122233333332211 12334667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEe-----CCEEEEec
Q 000856 510 QRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQ-----QGQVVETG 583 (1252)
Q Consensus 510 qRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~-----~G~i~~~g 583 (1252)
||++|||||+++|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999998777999999999999876 89999997 59999999
Q ss_pred ChHHHHhc
Q 000856 584 THEELIAK 591 (1252)
Q Consensus 584 ~~~~l~~~ 591 (1252)
+++++.+.
T Consensus 237 ~~~~~~~~ 244 (259)
T PRK14260 237 VTTQIFSN 244 (259)
T ss_pred CHHHHhcC
Confidence 99998653
No 487
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-39 Score=362.43 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=180.5
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC-----CCCcEEEECCccccCC--C
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD-----PNAGHVLLDNVDIKTL--Q 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~-----~~~G~i~~~g~~~~~~--~ 435 (1252)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 45899999999964 348999999999999999999999999999999999864 4999999999988643 2
Q ss_pred HHHHhhhceEEccCCCCchhcHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHH
Q 000856 436 LRWLRDQIGLVNQEPALFATTILENILYGKPE--A-TMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkq 510 (1252)
...+|++++|++|++.+++.|++||+.++... . ........ +.+.++.+ ..++.......+.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEI-----VEKSLRKAALWDEVSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHH-----HHHHHHHhCCccchhhHhhCChhhCCHHHHH
Confidence 34567789999999999988999999875321 1 11111111 11122222 011223446678899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
|++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999866 8999999999999999999886
Q ss_pred hc
Q 000856 590 AK 591 (1252)
Q Consensus 590 ~~ 591 (1252)
++
T Consensus 270 ~~ 271 (286)
T PRK14275 270 TN 271 (286)
T ss_pred hC
Confidence 54
No 488
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=359.75 Aligned_cols=220 Identities=30% Similarity=0.450 Sum_probs=179.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~~ 436 (1252)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999974 3489999999999999999999999999999999999974 79999999998853 344
Q ss_pred HHHhhhceEEccCCCCchh-cHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHH
Q 000856 437 RWLRDQIGLVNQEPALFAT-TILENILYGKPE---ATMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkq 510 (1252)
..+++.++|++|++.++.. |++||+.++... .......+. +.+.++.+ ..+........+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 155 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDEL-----VEKSLRGANLWNEVKDRLDKPGGGLSGGQQQ 155 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhhhHhhCCcccCCHHHHH
Confidence 5677889999999998875 999999865311 111111111 11222222 001123456777899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEe------CCEEEEec
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQ------QGQVVETG 583 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~------~G~i~~~g 583 (1252)
|++|||||+.+|+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.|
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~ 235 (258)
T PRK14241 156 RLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEID 235 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecC
Confidence 999999999999999999999999999999999999998767999999999999865 89999997 89999999
Q ss_pred ChHHHHhc
Q 000856 584 THEELIAK 591 (1252)
Q Consensus 584 ~~~~l~~~ 591 (1252)
+++++...
T Consensus 236 ~~~~~~~~ 243 (258)
T PRK14241 236 DTEKIFSN 243 (258)
T ss_pred CHHHHHhC
Confidence 99988653
No 489
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-39 Score=312.56 Aligned_cols=212 Identities=31% Similarity=0.442 Sum_probs=179.3
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHH---HH
Q 000856 364 NIEFKNVTFSYPSR-PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLR---WL 439 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~---~~ 439 (1252)
.|+++++++.-++. .+..+|++++|.|++||.++||||||||||||+-+++|+.+|++|+|.+.|+++..++.+ .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 47888998887643 346799999999999999999999999999999999999999999999999999888754 34
Q ss_pred h-hhceEEccCCCCchh-cHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHH
Q 000856 440 R-DQIGLVNQEPALFAT-TILENILYGKPEAT--MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIA 515 (1252)
Q Consensus 440 ~-~~i~~v~Q~~~l~~~-tv~~ni~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lA 515 (1252)
| +++|+|||..+|.+. |-.||+....+-.. ..+.. ..+.+.+... |+...+...+.+||||++||||||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~-----~~A~~lL~~v--GLg~Rl~HyP~qLSGGEQQRVAiA 158 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSR-----AGAKALLEAV--GLGKRLTHYPAQLSGGEQQRVALA 158 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHH-----HHHHHHHHHh--CcccccccCccccCchHHHHHHHH
Confidence 4 579999999998855 99999987644222 11111 1112334433 777778888889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhccCEEEEEeCCEEEEe
Q 000856 516 RAMLKNPKILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 516 Ral~~~~~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
||+...|+||+-||||.+||..+.+++.+.+..+. .|.|.|+||||+....+|||++-|++|+++++
T Consensus 159 RAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 159 RAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 99999999999999999999999999999998774 48999999999999999999999999999753
No 490
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-39 Score=336.59 Aligned_cols=170 Identities=35% Similarity=0.649 Sum_probs=157.4
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++ .++|+|+||++++||.++|+|+||||||||+++|+|+++|++|+|.+||.++...+ ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (173)
T cd03230 1 IEVRNLSKRYGK---KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIG 76 (173)
T ss_pred CEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEE
Confidence 478999999963 35999999999999999999999999999999999999999999999999988765 66788999
Q ss_pred EEccccccCcc-cHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCC
Q 000856 1090 LVQQEPALFAA-SIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPA 1168 (1252)
Q Consensus 1090 ~VpQd~~lf~g-TIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~ 1168 (1252)
|+||++.+|.+ |++||+. ||||||||++|||||+++|+
T Consensus 77 ~~~q~~~~~~~~tv~~~~~-----------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 77 YLPEEPSLYENLTVRENLK-----------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred EEecCCccccCCcHHHHhh-----------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99999998876 9999984 99999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-ccCEEEEEeCCEE
Q 000856 1169 ILLLDEATSALDAESECVLQEALERLM-RGRTTVLVAHRLSTIR-GVDCIGVVQDGRI 1224 (1252)
Q Consensus 1169 ILiLDEpTS~LD~~te~~i~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrI~vl~~G~I 1224 (1252)
+|||||||++||+.+...+.+.|++.. ++.|+|++||+.+.+. .||++++|++|++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 999999999999999999999999875 4689999999999887 5899999999974
No 491
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.1e-39 Score=373.53 Aligned_cols=231 Identities=33% Similarity=0.494 Sum_probs=184.7
Q ss_pred ccEEEEeEEEECCCC--------CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccc--c
Q 000856 363 GNIEFKNVTFSYPSR--------PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDI--K 432 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~--------~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~--~ 432 (1252)
.-++++|++++|... ....+++||||++++||++||||+||||||||.++|+|+++|++|+|.++|.|+ +
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 458899999999742 235689999999999999999999999999999999999999999999999872 2
Q ss_pred CCCHHHHhhhceEEccCCC--Cch-hcHHHHHhcCCCCCCH-HHHHHHHHHhcHHHHHhhCCCCccc-cccCCCCCCChH
Q 000856 433 TLQLRWLRDQIGLVNQEPA--LFA-TTILENILYGKPEATM-AEVEAAASAANAHSFITLLPNGYST-QVGERGVQLSGG 507 (1252)
Q Consensus 433 ~~~~~~~~~~i~~v~Q~~~--l~~-~tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~LSgG 507 (1252)
.-+....|+++-+|+|||. |-+ .||+++|.-....... .......+.. +.++.. |+.. ..++.+.+||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~---~ll~~V--gL~~~~l~ryP~elSGG 433 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVA---ELLELV--GLPPEFLDRYPHELSGG 433 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHH---HHHHHc--CCCHHHHhcCchhcCcc
Confidence 2234467788999999995 433 3999999753211110 0011111122 222222 4444 467888899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecC
Q 000856 508 QKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 508 qkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 584 (1252)
||||+||||||+.+|+++++|||||+||+..+..+.+.|+++.+ |.|.|+||||++.++. ||||+||++|+|+|.|+
T Consensus 434 QrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~ 513 (539)
T COG1123 434 QRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGP 513 (539)
T ss_pred hhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999999863 8999999999999988 89999999999999999
Q ss_pred hHHHHhc-ccchHHH
Q 000856 585 HEELIAK-AGAYASL 598 (1252)
Q Consensus 585 ~~~l~~~-~~~~~~~ 598 (1252)
.+++.+. ...|.+.
T Consensus 514 ~~~v~~~p~h~Ytr~ 528 (539)
T COG1123 514 TEKVFENPQHPYTRK 528 (539)
T ss_pred HHHHhcCCCChHHHH
Confidence 9888776 3455443
No 492
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-39 Score=335.01 Aligned_cols=171 Identities=56% Similarity=0.918 Sum_probs=161.1
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhcccE
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIG 1089 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1089 (1252)
++++|++++|++. ..++++|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 4789999999643 125899999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccccccCcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccCCCE
Q 000856 1090 LVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAI 1169 (1252)
Q Consensus 1090 ~VpQd~~lf~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~p~I 1169 (1252)
|++|++.+|+.|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~~~~~~~~~t~~e~l------------------------------------------LS~G~~~rl~la~al~~~p~l 117 (171)
T cd03228 80 YVPQDPFLFSGTIRENI------------------------------------------LSGGQRQRIAIARALLRDPPI 117 (171)
T ss_pred EEcCCchhccchHHHHh------------------------------------------hCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccCEEEEEeCCE
Q 000856 1170 LLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGR 1223 (1252)
Q Consensus 1170 LiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~DrI~vl~~G~ 1223 (1252)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 118 lllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 118 LILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 999999999999999999999998877799999999999998899999999985
No 493
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=350.99 Aligned_cols=214 Identities=29% Similarity=0.462 Sum_probs=177.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCccccCCCHHHHhhhce
Q 000856 365 IEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIG 444 (1252)
Q Consensus 365 i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 444 (1252)
++++|++++|++. ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~~-----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHHL-----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECCc-----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 6899999999632 2499999999999999999999999999999999999999999999988765432 45799
Q ss_pred EEccCCCCchh-cHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHHHHHHHHHhccCC
Q 000856 445 LVNQEPALFAT-TILENILYGKP-EATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNP 522 (1252)
Q Consensus 445 ~v~Q~~~l~~~-tv~~ni~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkqRv~lARal~~~~ 522 (1252)
|++|++.++.+ |++||+.++.. .....+ .....+.+.++.+ |++.........||||||||++||||++++|
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p 148 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNA----AQREKLHAIARQM--GIEDLLARLPGQLSGGQRQRVALARCLVREQ 148 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCH----HHHHHHHHHHHHc--CcHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999998876 99999987531 111000 0011122333333 5555566667799999999999999999999
Q ss_pred CEEEEeCCCCCCChHhHHHHHHHHHHhc--CCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHHhc
Q 000856 523 KILLLDEATSALDAGSESIVQEALDRLM--VGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELIAK 591 (1252)
Q Consensus 523 ~illlDEpts~LD~~~~~~~~~~l~~~~--~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 591 (1252)
+++||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 149 ~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 149 PILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999874 37899999999999876 899999999999999999888654
No 494
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-39 Score=358.41 Aligned_cols=220 Identities=29% Similarity=0.448 Sum_probs=180.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCC-----CcEEEECCccccC--CCH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPN-----AGHVLLDNVDIKT--LQL 436 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~-----~G~i~~~g~~~~~--~~~ 436 (1252)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 35899999999999999999999999999999999999874 8999999998864 334
Q ss_pred HHHhhhceEEccCCCCchh-cHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHhhC--CCCccccccCCCCCCChHHHH
Q 000856 437 RWLRDQIGLVNQEPALFAT-TILENILYGKPE--A-TMAEVEAAASAANAHSFITLL--PNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 437 ~~~~~~i~~v~Q~~~l~~~-tv~~ni~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~g~~LSgGqkq 510 (1252)
..+++.++|++|++.++.. |++||+.++... . ..++..+.+. +.+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5667789999999998875 999999864321 1 1222222111 111111 111222345667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecChHHHH
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGTHEELI 589 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 589 (1252)
|++|||||+++|+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999976 8999999999999999999886
Q ss_pred hc
Q 000856 590 AK 591 (1252)
Q Consensus 590 ~~ 591 (1252)
..
T Consensus 236 ~~ 237 (252)
T PRK14272 236 TN 237 (252)
T ss_pred hC
Confidence 54
No 495
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=358.07 Aligned_cols=219 Identities=32% Similarity=0.457 Sum_probs=181.8
Q ss_pred ccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC--CC
Q 000856 363 GNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--LQ 435 (1252)
Q Consensus 363 ~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--~~ 435 (1252)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. ..
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999974 3589999999999999999999999999999999999863 69999999998854 23
Q ss_pred HHHHhhhceEEccCCCCchhcHHHHHhcCCCCCC-----HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCChHHHH
Q 000856 436 LRWLRDQIGLVNQEPALFATTILENILYGKPEAT-----MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLSGGQKQ 510 (1252)
Q Consensus 436 ~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LSgGqkq 510 (1252)
...+++.++|++|++.+++.|+.||+.++..... .+....+++.+++.+ ++.....+.+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWE-------EVKDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccch-------hhHHHhcCCcccCCHHHHH
Confidence 4456788999999999998899999987532111 111222233332221 1223456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEe---------CCEEE
Q 000856 511 RIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQ---------QGQVV 580 (1252)
Q Consensus 511 Rv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~---------~G~i~ 580 (1252)
|++|||||+.+|+++||||||++||+.+++.+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998778999999999999966 89999997 89999
Q ss_pred EecChHHHHhc
Q 000856 581 ETGTHEELIAK 591 (1252)
Q Consensus 581 ~~g~~~~l~~~ 591 (1252)
+.|+.+++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999998654
No 496
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=7.4e-39 Score=357.90 Aligned_cols=218 Identities=28% Similarity=0.433 Sum_probs=181.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCCCCcEEEECCcc-----ccCCCHHH
Q 000856 364 NIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGHVLLDNVD-----IKTLQLRW 438 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~~~g~~-----~~~~~~~~ 438 (1252)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999974 358999999999999999999999999999999999999999999999998 76665443
Q ss_pred ----HhhhceEEccCCC--Cch-hcHHHHHhcCC---CCCCHHHHHHHHHHhcHHHHHhhCCCCcc-ccccCCCCCCChH
Q 000856 439 ----LRDQIGLVNQEPA--LFA-TTILENILYGK---PEATMAEVEAAASAANAHSFITLLPNGYS-TQVGERGVQLSGG 507 (1252)
Q Consensus 439 ----~~~~i~~v~Q~~~--l~~-~tv~~ni~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~LSgG 507 (1252)
+++.++|++|++. ++. .|+.+|+.+.. ......+.. ..+.+.++.+ |+. +..++.+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3557999999984 343 48888886421 001111111 1234556665 454 4667888999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCCEEEEecC
Q 000856 508 QKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 508 qkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 584 (1252)
||||++|||||+.+|+++||||||++||+.+++.+.+.|+++.+ |.|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 7899999999999975 89999999999999999
Q ss_pred hHHHHhc
Q 000856 585 HEELIAK 591 (1252)
Q Consensus 585 ~~~l~~~ 591 (1252)
++++...
T Consensus 236 ~~~~~~~ 242 (258)
T PRK11701 236 TDQVLDD 242 (258)
T ss_pred HHHHhcC
Confidence 9988644
No 497
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-39 Score=337.19 Aligned_cols=172 Identities=44% Similarity=0.695 Sum_probs=159.2
Q ss_pred EEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCC--HHHHhcc
Q 000856 1010 IELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLN--LKSLRLK 1087 (1252)
Q Consensus 1010 I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~--~~~lR~~ 1087 (1252)
|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ...+++.
T Consensus 1 i~~~~l~~~~~~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYGQ---KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEECC---eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 478999999963 36999999999999999999999999999999999999999999999999998876 5678899
Q ss_pred cEEEccccccCc-ccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHccC
Q 000856 1088 IGLVQQEPALFA-ASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166 (1252)
Q Consensus 1088 i~~VpQd~~lf~-gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~~ 1166 (1252)
++|+||+|.+|. .|++||+.+. ||||||||++||||++++
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~---------------------------------------lS~G~~qr~~la~al~~~ 118 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG---------------------------------------LSGGQQQRVALARALAMD 118 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec---------------------------------------CCHHHHHHHHHHHHHHCC
Confidence 999999999885 5999999763 999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-ccCEEEEEeCCE
Q 000856 1167 PAILLLDEATSALDAESECVLQEALERLMR--GRTTVLVAHRLSTIR-GVDCIGVVQDGR 1223 (1252)
Q Consensus 1167 p~ILiLDEpTS~LD~~te~~i~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrI~vl~~G~ 1223 (1252)
|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|+
T Consensus 119 p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 119 PDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999998764 689999999999997 489999999985
No 498
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-39 Score=358.55 Aligned_cols=219 Identities=29% Similarity=0.470 Sum_probs=183.0
Q ss_pred cccEEEEeEEEECCCCCCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccCC-----CCcEEEECCccccC---
Q 000856 362 NGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDP-----NAGHVLLDNVDIKT--- 433 (1252)
Q Consensus 362 ~~~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~~-----~~G~i~~~g~~~~~--- 433 (1252)
.+.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 356999999999974 3599999999999999999999999999999999999875 79999999987742
Q ss_pred -CCHHHHhhhceEEccCCCCchhcHHHHHhcCCC--CCC-----HHHHHHHHHHhcHHHHHhhCCCCccccccCCCCCCC
Q 000856 434 -LQLRWLRDQIGLVNQEPALFATTILENILYGKP--EAT-----MAEVEAAASAANAHSFITLLPNGYSTQVGERGVQLS 505 (1252)
Q Consensus 434 -~~~~~~~~~i~~v~Q~~~l~~~tv~~ni~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~LS 505 (1252)
.....+++.++|++|++.+|..|++||+.++.. ... .+++..+++.+++. .++.+..++.+.+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALW-------DEVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCc-------hhhhHHHhCCcccCC
Confidence 334567788999999999998899999987531 111 12222333322221 133445667788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcCCCeEEEEccCccchhc-cCEEEEEeCCEEEEecC
Q 000856 506 GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRN-VDTVAVIQQGQVVETGT 584 (1252)
Q Consensus 506 gGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~~~tvi~itH~~~~~~~-~d~i~~l~~G~i~~~g~ 584 (1252)
||||||++|||||+.+|+++||||||++||+.+.+.+.+.|+++.+++|+|+|||+++++.. ||++++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999965 89999999999999999
Q ss_pred hHHHHh
Q 000856 585 HEELIA 590 (1252)
Q Consensus 585 ~~~l~~ 590 (1252)
++++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 988764
No 499
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.6e-38 Score=339.32 Aligned_cols=192 Identities=30% Similarity=0.428 Sum_probs=152.6
Q ss_pred cEEEEeEEEECCCCCCccceeeeeEEEeCCcEEEEEcCCCCChHHHHHHHhccCCCCCceEEECCcccCCCCHHHHhccc
Q 000856 1009 EIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKI 1088 (1252)
Q Consensus 1009 ~I~~~nvsf~Y~~~~~~~vL~~isl~I~~Ge~vaIvG~SGSGKSTLl~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1088 (1252)
-+-+.||+|.||+. .|.+++++|-|.--.+||||||+|.|||||+++|.|-++|+.|+..=+ -|-+|
T Consensus 586 vLGlH~VtFgy~gq--kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~i 652 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ--KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRI 652 (807)
T ss_pred eeecccccccCCCC--CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeee
Confidence 46789999999854 478999999999999999999999999999999999999999986544 25579
Q ss_pred EEEccccc--c-CcccHHHHhccCCCCCCHHHHHHHHHHcCchhhHhhCCCcCCCccCCCCCCCChhHHHHHHHHHHHcc
Q 000856 1089 GLVQQEPA--L-FAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLK 1165 (1252)
Q Consensus 1089 ~~VpQd~~--l-f~gTIreNl~~~~~~~~deei~~al~~~~l~~~i~~lp~gldt~vge~G~~LSgGQrQrlaLARALl~ 1165 (1252)
|+..|... | -..|--|-|.-.. +..-++.+.+|-..|+..... |. .-..||||||-|+++|-.-++
T Consensus 653 G~FdQh~~E~L~~Eetp~EyLqr~F-Nlpyq~ARK~LG~fGL~sHAH-------Ti---kikdLSGGQKaRValaeLal~ 721 (807)
T KOG0066|consen 653 GWFDQHANEALNGEETPVEYLQRKF-NLPYQEARKQLGTFGLASHAH-------TI---KIKDLSGGQKARVALAELALG 721 (807)
T ss_pred echhhhhHHhhccccCHHHHHHHhc-CCChHHHHHHhhhhhhhhccc-------eE---eeeecCCcchHHHHHHHHhcC
Confidence 99988763 2 2345555554322 244566777777777654322 21 124699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhccC-EEEEEeCCEEEE
Q 000856 1166 NPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVD-CIGVVQDGRIVE 1226 (1252)
Q Consensus 1166 ~p~ILiLDEpTS~LD~~te~~i~~~l~~~~~~~TvI~IaHrl~ti~~~D-rI~vl~~G~Ive 1226 (1252)
.|+||||||||.+||.++-..+-++|++. +..||+|+|+-..|...| ..+|+++--|-|
T Consensus 722 ~PDvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~e 781 (807)
T KOG0066|consen 722 GPDVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDE 781 (807)
T ss_pred CCCEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhh
Confidence 99999999999999999999999999987 347999999999887664 466777655544
No 500
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=368.66 Aligned_cols=227 Identities=24% Similarity=0.381 Sum_probs=182.7
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEeeCCCEEEEEcCCCCcHHHHHHHHhcccC----CCCcEEEECCccccCCCHHH
Q 000856 364 NIEFKNVTFSYPSR-PDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYD----PNAGHVLLDNVDIKTLQLRW 438 (1252)
Q Consensus 364 ~i~~~~v~~~y~~~-~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTll~~l~g~~~----~~~G~i~~~g~~~~~~~~~~ 438 (1252)
-|+++|++++|+.. ....+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++...+...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37899999999642 23468999999999999999999999999999999999986 58999999999998777654
Q ss_pred Hh----hhceEEccCCC--Cch-hcHHHHHhcCCC---CC-----CHHHHHHHHHHhcHHHHHhhCCCCcc---ccccCC
Q 000856 439 LR----DQIGLVNQEPA--LFA-TTILENILYGKP---EA-----TMAEVEAAASAANAHSFITLLPNGYS---TQVGER 500 (1252)
Q Consensus 439 ~~----~~i~~v~Q~~~--l~~-~tv~~ni~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~ 500 (1252)
++ +.|+||+|+|. +.+ .||.+|+..... .. ...+. ...+.+.++.+ |+. ....+.
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 32 47999999996 333 389999864210 00 00111 11123344444 443 234667
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCChHhHHHHHHHHHHhcC--CCeEEEEccCccchhc-cCEEEEEeCC
Q 000856 501 GVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMV--GRTTVVVAHRLSTIRN-VDTVAVIQQG 577 (1252)
Q Consensus 501 g~~LSgGqkqRv~lARal~~~~~illlDEpts~LD~~~~~~~~~~l~~~~~--~~tvi~itH~~~~~~~-~d~i~~l~~G 577 (1252)
+.+|||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 789999999999999999999999999999999999999999999999853 8999999999999976 8999999999
Q ss_pred EEEEecChHHHHhcc-cchHH
Q 000856 578 QVVETGTHEELIAKA-GAYAS 597 (1252)
Q Consensus 578 ~i~~~g~~~~l~~~~-~~~~~ 597 (1252)
+|++.|+.+++.++. ..|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 999999999987653 34544
Done!