Query 000856
Match_columns 1252
No_of_seqs 380 out of 4400
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 17:34:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000856.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_624-627//hhsearch_pdb/000856hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1798.9 131.9 1227 20-1250 56-1318(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1574.0 117.0 1225 19-1250 28-1272(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 850.6 71.0 579 669-1250 58-655 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 777.7 59.3 575 672-1249 34-626 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 738.5 64.7 571 23-604 22-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 734.6 72.5 573 22-603 7-579 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 732.2 66.9 573 26-602 2-576 (578)
8 3qf4_B Uncharacterized ABC tra 1.0 1 1 730.3 63.3 571 670-1250 22-592 (598)
9 3qf4_A ABC transporter, ATP-bi 1.0 1 1 730.0 68.4 567 676-1250 14-580 (587)
10 4a82_A Cystic fibrosis transme 1.0 1 1 727.7 65.6 571 674-1249 3-577 (578)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1798.91 Aligned_cols=1227 Identities=36% Similarity=0.609 Sum_probs=1062.8
Q ss_pred HCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----------------CCHHHHHHHH
Q ss_conf 028700899877120145899999999999988678899999999973011588----------------7424436899
Q 000856 20 KEQSLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQ----------------TDIHKMTHEV 83 (1252)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~~~~~~~----------------~~~~~~~~~~ 83 (1252)
..++++++++|+|++++++.+++++++++++.|+..|++++++|++++.+.... .....+.+.+
T Consensus 56 ~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (1321)
T 4f4c_A 56 VVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDV 135 (1321)
T ss_dssp CSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHH
T ss_pred CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 56877999973156767899999999999999999999999999999999701000145430003443100168999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999829901130247802589999934999999999999
Q 000856 84 CKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKV 163 (1252)
Q Consensus 84 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~ 163 (1252)
..+++++++++++.+++.|++.+++.++++++..++|.++|+|++++|++|||++ ++|++++|+++|++.+++++.+.+
T Consensus 136 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~~l 214 (1321)
T 4f4c_A 136 MNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGDKI 214 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999978898998799-848999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99998999999999999989699999999999999999999999998999999999999999999998169999997136
Q 000856 164 GNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGE 243 (1252)
Q Consensus 164 ~~~~~~~~~~i~~~i~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~ik~~~~e 243 (1252)
+.++..++.++++++++|+++|++++++++++|+++++..++.+++++..++.++..++.++.+.|+++|+++||+|++|
T Consensus 215 ~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 294 (1321)
T 4f4c_A 215 GMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGL 294 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999839999982142
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998878999999999999999999999970865988999999999998898999899
Q 000856 244 SKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFS 323 (1252)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 323 (1252)
+.+.++|.+..++..+...+.....+...+...++..+.+++++|+|++++.+|.+++|.+++++.+......|+..+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~ 374 (1321)
T 4f4c_A 295 RYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGP 374 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999995998699999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 99999999999999999970299887899998767887640899968898899999743012038860898999985899
Q 000856 324 NLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSG 403 (1252)
Q Consensus 324 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~l~i~~g~~~~ivG~sG 403 (1252)
.+..++++.++++|++++++.+|+.+.....+....+..++|+|+||+|+||++++.++|+|+||++++|+++|||||||
T Consensus 375 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 375 QLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 99999999999999999971785345666556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHCHH
Q ss_conf 81899999995146799858988993166778898832014773678776111999971599999999999999995379
Q 000856 404 SGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAH 483 (1252)
Q Consensus 404 sGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~ 483 (1252)
||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||+|+||||++||+|||++|+++++++++++||+.++++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 98850999754412599998896899999999986009988887177779996749999999998618972999815942
Q 000856 484 SFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLS 563 (1252)
Q Consensus 484 ~~i~~lp~g~~t~v~~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~ 563 (1252)
+|++.||+||+|.|||+|.+||||||||||||||++++|+|+|||||||+||+++|+.+++++.++.+++|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred CHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCCCC---CCCCCC--CCCCCCCCCCCCCCCCCC--C
Q ss_conf 011039799995988978349578975032139999998732025778---997533--543323465542111122--3
Q 000856 564 TIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQEMVRNRDFA---NPSTRR--SRSTRLSHSLSTKSLSLR--S 636 (1252)
Q Consensus 564 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~--~ 636 (1252)
+++.||+|++|++|+|+++|+|+||++++|.|++++..|......+.. ....+. .................. .
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIM 694 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC-----------------------------
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 89868989996399651368999999853279999996221222233233443322321112222234222222211022
Q ss_pred CCCCCCCC-CCC--CCCCCCCCCC------CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54446776-666--7888610012------21111369999955899997760992579999999999999888999999
Q 000856 637 GSLRNLSY-SYS--TGADGRIEMV------SNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIV 707 (1252)
Q Consensus 637 ~~~~~~~~-~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1252)
...+.... +.. ...+...+.. ...+..+........+++++.+..+.+..+.++.+.+.+.+++.+.++++
T Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~ 774 (1321)
T 4f4c_A 695 NRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVF 774 (1321)
T ss_dssp ---------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11101321245677402577753154038999999997078631099999998778999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 99999998404971133426899999999999999999999999999999999999999999998389775444677737
Q 000856 708 MACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSS 787 (1252)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g 787 (1252)
++.+++.+.. ++.........|.++|+++++...++.++..+++.+.+.++..++|..+|++++++|++|||..++++|
T Consensus 775 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G 853 (1321)
T 4f4c_A 775 FTSFMNVFAG-NPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASG 853 (1321)
T ss_dssp HHHHHHHTSS-CSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHH
T ss_pred HHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHH
T ss_conf 9999987517-934556678999999999999999999999999999999999999999988873499333216788848
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999963199999999988999999999999999999999779999999999999999999999883388999999999
Q 000856 788 LVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAK 867 (1252)
Q Consensus 788 ~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~li~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (1252)
++++|+++|++.++..++..+..++..++.+++.++++++++|++++++++++|++++..+...+.......+..+...+
T Consensus 854 ~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1321)
T 4f4c_A 854 KISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFAD 933 (1321)
T ss_dssp HHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88850250599999999999999999865377770221378689999999988899999999999999999999999888
Q ss_pred HHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999998622799997153899999999999769999999999999999999999999999999999999981787989
Q 000856 868 TSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFS 947 (1252)
Q Consensus 868 ~~~~~~e~l~gi~~Ika~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~ 947 (1252)
....+.|+++|+++||+|++++.+.+++.+..+...+...+......+...+...+..+..++++|+|..++..+..+.+
T Consensus 934 ~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~ 1013 (1321)
T 4f4c_A 934 SGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQ 1013 (1321)
T ss_dssp HHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98899999962798886141488999999999999999999999999999999999999999999875788753765421
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf 9--99999999999999999999799999989999999998435688899999999887766519999589988998884
Q 000856 948 K--VIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDV 1025 (1252)
Q Consensus 948 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~ 1025 (1252)
. ++.++.++.....++..+...++++..+..+.+|++++++.+++.+.. ....+.++..|+|+|+||+|+||++++.
T Consensus 1014 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~-~~~~~~~~~~g~I~f~nVsf~Y~~~~~~ 1092 (1321)
T 4f4c_A 1014 PMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSL-SLAGEKKKLYGKVIFKNVRFAYPERPEI 1092 (1321)
T ss_dssp HHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTT-CCCSBCCCCCCCEEEEEEEECCTTSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCEEEEEEEEEECCCCCCC
T ss_conf 478999999998778899999999999999999999899986076657776-6778788888818999879857999988
Q ss_pred CCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHH
Q ss_conf 42000269983795999984999986889999852377997569989931689997887322088804665575558888
Q 000856 1026 VVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDN 1105 (1252)
Q Consensus 1026 ~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~~~LF~gTIreN 1105 (1252)
|||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||+++++|||||+||+||||||
T Consensus 1093 ~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreN 1172 (1321)
T 4f4c_A 1093 EILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAEN 1172 (1321)
T ss_dssp CSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHH
T ss_pred CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHH
T ss_conf 21245169988989999989999819999999956863899789999998654999999854599878997327239999
Q ss_pred HCCCC--CCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
Q ss_conf 52299--9999999999999807212586089867885689999889259999999999713999899826678999897
Q 000856 1106 IAYGK--EGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAES 1183 (1252)
Q Consensus 1106 L~~g~--~~~sd~~i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQRlalARALl~~p~ILiLDEpTSaLD~~t 1183 (1252)
|.+|. ++++|+++++|++.++++++|+++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++|
T Consensus 1173 I~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~t 1252 (1321)
T 4f4c_A 1173 IIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTES 1252 (1321)
T ss_dssp HSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHH
T ss_pred HHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 74549999999999999999829849997176789998238891569999999999999971799899968111578999
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 9999999998718975999814923653069899994977988149246620998535999977420
Q 000856 1184 ECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1184 e~~i~~~l~~~~~~~TvI~IsHrl~ti~~~D~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
|+.|+++|++.+++||+|+||||++|+++||+|+||++|+|+|+|+|+||+++ +|.|++||+.|..
T Consensus 1253 E~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q~~ 1318 (1321)
T 4f4c_A 1253 EKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQMT 1318 (1321)
T ss_dssp HHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C------------
T ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHH
T ss_conf 99999999997399989996068999996999999989899998888999849-8099999999985
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1574.02 Aligned_cols=1225 Identities=38% Similarity=0.694 Sum_probs=1051.7
Q ss_pred HHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC------C---------HHHHHHHH
Q ss_conf 10287008998771201458999999999999886788999999999730115887------4---------24436899
Q 000856 19 KKEQSLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQT------D---------IHKMTHEV 83 (1252)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~~~~~~~~------~---------~~~~~~~~ 83 (1252)
++.+...++++++|..+.+|.+++++++++++.++..|+++++++.++|.+..... + .......+
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (1284)
T 3g5u_A 28 EKKPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEM 107 (1284)
T ss_dssp -----CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 66666569999987265799999999999999999999999999999999861344433222222111110024468899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999829901130247802589999934999999999999
Q 000856 84 CKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKV 163 (1252)
Q Consensus 84 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~ 163 (1252)
..+++++++++++.+++.+++.+++.+.++++..++|.++|++++++|++|||++ ++|++++|+++|++.+++.+...+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~ 186 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKI 186 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999986998997568-877899999988999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99998999999999999989699999999999999999999999998999999999999999999998169999997136
Q 000856 164 GNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGE 243 (1252)
Q Consensus 164 ~~~~~~~~~~i~~~i~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~ik~~~~e 243 (1252)
+.++..++.++++++++++++|++++++++++|++.++..++.++.++..++.++..++.++.+.|+++|+++||+|++|
T Consensus 187 ~~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e 266 (1284)
T 3g5u_A 187 GMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQ 266 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCH
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999787999984653
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998878999999999999999999999970865988999999999998898999899
Q 000856 244 SKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFS 323 (1252)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 323 (1252)
+.+.++|.+..++..+...+.....+...++..++....+++++|+|++++..|.+++|.+++++++......++..+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~ 346 (1284)
T 3g5u_A 267 KKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASP 346 (1284)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999992998899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 99999999999999999970299887899998767887640899968898899999743012038860898999985899
Q 000856 324 NLGAFSKGKAAGYKLMEIIKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSG 403 (1252)
Q Consensus 324 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~l~i~~g~~~~ivG~sG 403 (1252)
.+..++++.++++|++++++.+++.+.....+..+++..+.|+++||+|+|+++++.++|+|+||++++|+++|||||||
T Consensus 347 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 347 NIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 99999999999999999972898677666567777777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHCHH
Q ss_conf 81899999995146799858988993166778898832014773678776111999971599999999999999995379
Q 000856 404 SGKSTVVSLIERFYDPNAGHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAH 483 (1252)
Q Consensus 404 sGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~ 483 (1252)
||||||+++|.|+|+|++|+|.+||.|+++++..++|++++||+|+|++|++||+|||.+|.++.++++++++++.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 98850999754412599998896899999999986009988887177779996749999999998618972999815942
Q 000856 484 SFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLS 563 (1252)
Q Consensus 484 ~~i~~lp~g~~t~v~~~g~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~ 563 (1252)
+++..+|+|++|.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred CHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC-CCCCCC
Q ss_conf 011039799995988978349578975032139999998732025778997533543323465542111-122-354446
Q 000856 564 TIRNVDTVAVIQQGQVVETGTHEELIAKAGAYASLIRFQEMVRNRDFANPSTRRSRSTRLSHSLSTKSL-SLR-SGSLRN 641 (1252)
Q Consensus 564 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~ 641 (1252)
++..||+|++|++|+++++|+|+++++.++.|..++..+................ ............. ... ......
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 665 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSK-DEIDNLDMSSKDSGSSLIRRRSTR 665 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC----------------------------------------
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9974998999989999997889999867877999999743002211133333322-222344333333332000345433
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-
Q ss_conf 7766667888610012211113699999558999977609925799999999999998889999999999999840497-
Q 000856 642 LSYSYSTGADGRIEMVSNAETDRKNPAPDGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNP- 720 (1252)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 720 (1252)
.....+...+.. . ...+ ..........+++++++..+.++++..+.+.+++.+.+.+.++++++.+++.+....+
T Consensus 666 ~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 741 (1284)
T 3g5u_A 666 KSICGPHDQDRK--L-STKE-ALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPP 741 (1284)
T ss_dssp ----------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCST
T ss_pred CCCCCCCCCCCC--C-CHHH-HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 344564223321--1-0245-55313662589999998451579999999999999999999999999999998556850
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHH
Q ss_conf 11334268999999999999999999999999999999999999999999983897754446777379999996319999
Q 000856 721 ASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADV 800 (1252)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i 800 (1252)
.........+..+++++++...+..++..+.+.+.+.++..++|..++++++++|++||+...+++|++++|+++|++.+
T Consensus 742 ~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i 821 (1284)
T 3g5u_A 742 ETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQV 821 (1284)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 33677999999999999999999999999999999999999999999999983998887578998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999889999999999999999999997799999999999999999999998833889999999999999999862279
Q 000856 801 KSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIR 880 (1252)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~li~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ 880 (1252)
+..++..+..++..+..++..+++++.++|++++++++.+|+++++.+...+.......+..+........+.|+++|++
T Consensus 822 ~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ 901 (1284)
T 3g5u_A 822 KGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFR 901 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999996999999999999999999999999999999999999999999999998899
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99971538999999999997699999999999999999999999999999999999999817879899999999999999
Q 000856 881 TVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTA 960 (1252)
Q Consensus 881 ~Ika~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~ 960 (1252)
+||+|+.++++.+++.+..+...+...+.....++..++......+..++++|+|..++..+.++.+.++.++.++....
T Consensus 902 ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~ 981 (1284)
T 3g5u_A 902 TVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGA 981 (1284)
T ss_dssp TTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99984659999999999999999999999999999999999999999999999999999909806999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCE
Q ss_conf 99999999799999989999999998435688899999999887766519999589988998884420002699837959
Q 000856 961 NSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQS 1040 (1252)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~ 1040 (1252)
.++..+....+++.++..+.+|+.+.++.+++.+.........++..|.|+|+||+|+|+++++.++|+|+||+|++||+
T Consensus 982 ~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~ 1061 (1284)
T 3g5u_A 982 MAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQT 1061 (1284)
T ss_dssp HHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCE
T ss_conf 99999999999999999999999999838876666555665456777857999989977999987002030599769988
Q ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCC--CCCHHHH
Q ss_conf 99984999986889999852377997569989931689997887322088804665575558888522999--9999999
Q 000856 1041 QALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKE--GATEAEV 1118 (1252)
Q Consensus 1041 vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~~~LF~gTIreNL~~g~~--~~sd~~i 1118 (1252)
+|||||||||||||+++|+|+|+|++|+|.+||+|+++++++.+|++++||||||.+|++||+|||.++.+ ..+++++
T Consensus 1062 v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i 1141 (1284)
T 3g5u_A 1062 LALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEI 1141 (1284)
T ss_dssp EEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHH
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHH
T ss_conf 99988999978999999946867899779899998000789999702689877874066669999746687789999999
Q ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 99999807212586089867885689999889259999999999713999899826678999897999999999871897
Q 000856 1119 VEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGR 1198 (1252)
Q Consensus 1119 ~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQRlalARALl~~p~ILiLDEpTSaLD~~te~~i~~~l~~~~~~~ 1198 (1252)
+++++.+++++++..+|+||||.+||+|.+||||||||+||||||+++|+|||||||||+||+++++.+++.+++..+++
T Consensus 1142 ~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~ 1221 (1284)
T 3g5u_A 1142 VRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGR 1221 (1284)
T ss_dssp HHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSS
T ss_pred HHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99999839599997270424561178889338999999999999974999999868755579999999999999867999
Q ss_pred EEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 5999814923653069899994977988149246620998535999977420
Q 000856 1199 TTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1199 TvI~IsHrl~ti~~~D~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
|+|+||||++++..||||+||++|+++|.|+|++|+++ +|.|++||+.|..
T Consensus 1222 tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~ 1272 (1284)
T 3g5u_A 1222 TCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAG 1272 (1284)
T ss_dssp CEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC-
T ss_pred EEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHH
T ss_conf 89999558799980998999989989997789999847-7779999999761
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=850.58 Aligned_cols=579 Identities=36% Similarity=0.583 Sum_probs=524.5
Q ss_pred CCHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CCHHHHHHHH
Q ss_conf 95589999776099-2579999999999999888999999999999984049------------------7113342689
Q 000856 669 PDGYFLRLLKLNAP-EWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRN------------------PASMERKTKE 729 (1252)
Q Consensus 669 ~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 729 (1252)
....+.+++++..+ .+..++++.+.+++.|+..|++.++++.+++.+.... ..........
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999983897754446777379999996319999999998899
Q 000856 730 FVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRIS 809 (1252)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~ 809 (1252)
+.+.++++++..+++.++..+++.+.+.+...++|..+|+|++++|++|||. +++|++++|+++|++.++..+...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999997889899879--98489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH
Q ss_conf 99999999999999999997799999999999999999999998833889999999999999999862279999715389
Q 000856 810 VILQNMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQN 889 (1252)
Q Consensus 810 ~~~~~~~~~~~~~i~~~~~~~~l~li~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ika~~~~~ 889 (1252)
.++..++.++.+++++++++|++++++++++|+.+++.....+..++..++.+...++....+.|.++|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997699999999999999999999999999999999999999817879899999999999999999999997
Q 000856 890 KILSLFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSL 969 (1252)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1252)
.+.+++.+..++..+...+......+..+...+...+..++++|+|..++..|.++.|.+++++.++.....++..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCC
Q ss_conf 99999989999999998435688899999999887766519999589988998884420002699837959999849999
Q 000856 970 APEIIRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGS 1049 (1252)
Q Consensus 970 ~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGs 1049 (1252)
...+..+..+++|++++++.+++.+..........+..|+|+|+||+|+||++++.++|+|+||+|++|+++||||||||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGs 455 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGC 455 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCC
T ss_conf 99999999999999999717853456665565677888767999855407999987433331886228827899805898
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHH
Q ss_conf 86889999852377997569989931689997887322088804665575558888522999999999999999807212
Q 000856 1050 GKSSVIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHG 1129 (1252)
Q Consensus 1050 GKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~~~LF~gTIreNL~~g~~~~sd~~i~~al~~a~l~~ 1129 (1252)
|||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||||.||+|||||||.+|+++++++++++||+.+++++
T Consensus 456 GKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~ 535 (1321)
T 4f4c_A 456 GKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEK 535 (1321)
T ss_dssp CHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHH
T ss_conf 57788887545651644861579965011259998504666587533207861678864155220999999998756546
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHH
Q ss_conf 58608986788568999988925999999999971399989982667899989799999999987189759998149236
Q 000856 1130 FVSALPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLST 1209 (1252)
Q Consensus 1130 ~i~~lp~Gldt~vge~G~~LSgGQkQRlalARALl~~p~ILiLDEpTSaLD~~te~~i~~~l~~~~~~~TvI~IsHrl~t 1209 (1252)
+++.||+|+||.|||+|.+||||||||||||||++++|+|||||||||+||+++|+.++++|.+..+++|+|+||||+++
T Consensus 536 ~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls~ 615 (1321)
T 4f4c_A 536 FIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLST 615 (1321)
T ss_dssp HHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTTT
T ss_pred HHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 88708888860755898877777879999999872599989984554468878999999999998479889997363878
Q ss_pred HHCCCEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 53069899994977988149246620998535999977420
Q 000856 1210 IRGVDCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1210 i~~~D~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
+++||+|+||++|+|+|+|+|+||+++ +|.|+++++.|..
T Consensus 616 i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~~ 655 (1321)
T 4f4c_A 616 IRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQTF 655 (1321)
T ss_dssp TTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHHH
T ss_pred HHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHHC
T ss_conf 986898999639965136899999985-3279999996221
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=777.70 Aligned_cols=575 Identities=37% Similarity=0.630 Sum_probs=512.7
Q ss_pred HHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------------CHHHHHHHHHHHH
Q ss_conf 89999776099-25799999999999998889999999999999840497-----------------1133426899999
Q 000856 672 YFLRLLKLNAP-EWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNP-----------------ASMERKTKEFVFI 733 (1252)
Q Consensus 672 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 733 (1252)
.+.+++++..+ .+..++++.+.+++.+...+..+++++.+++.+..... .........+..+
T Consensus 34 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (1284)
T 3g5u_A 34 SVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYY 113 (1284)
T ss_dssp TTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69999987265799999999999999999999999999999999861344433222222111110024468899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999838977544467773799999963199999999988999999
Q 000856 734 YIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQ 813 (1252)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~ 813 (1252)
++++++...++.++..+++.+.+.+...++|..+|++++++|++||+. +++|++++|+++|++.++..++..+..++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 191 (1284)
T 3g5u_A 114 YTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFFQ 191 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999998699899756--887789999998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH
Q ss_conf 99999999999999977999999999999999999999988338899999999999999998622799997153899999
Q 000856 814 NMTSLLTSFIVAFIVEWRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILS 893 (1252)
Q Consensus 814 ~~~~~~~~~i~~~~~~~~l~li~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ika~~~~~~~~~ 893 (1252)
.++.++..+++++..+|++++++++.+|+++++.....+..++..++.+...++....+.|+++|+++||+|++|+++.+
T Consensus 192 ~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~ 271 (1284)
T 3g5u_A 192 AMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELE 271 (1284)
T ss_dssp HHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHH
T ss_conf 99999999999999989999999999999999999999999999999999999999999999978799998465399999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999976999999999999999999999999999999999999998178798999999999999999999999979999
Q 000856 894 LFCHELRVPQSQTLRRSLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEI 973 (1252)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1252)
+|.+..++..+...+......+..++..++.....++++|+|..++..|.++.|.+++++........++..+...+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1284)
T 3g5u_A 272 RYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAF 351 (1284)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999299889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHH
Q ss_conf 99899999999984356888999999998877665199995899889988844200026998379599998499998688
Q 000856 974 IRGGESVGSVFSTLDRSTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSS 1053 (1252)
Q Consensus 974 ~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKST 1053 (1252)
..+..+++|++++++.+++.++........++..|.|+|+||+|+|+++++.++|+|+||+|++||++||||||||||||
T Consensus 352 ~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKST 431 (1284)
T 3g5u_A 352 ANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKST 431 (1284)
T ss_dssp HHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHH
T ss_conf 99999999999997289867766656777777777189999899769999871012545897599889998999997999
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
Q ss_conf 99998523779975699899316899978873220888046655755588885229999999999999998072125860
Q 000856 1054 VIALIERFYDPTAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSA 1133 (1252)
Q Consensus 1054 L~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q~~~LF~gTIreNL~~g~~~~sd~~i~~al~~a~l~~~i~~ 1133 (1252)
|+++|+|+|+|++|+|.+||+|+++++.+.+|+++++|||||.+|++||+|||.+|.++.++++++++++.+++++++..
T Consensus 432 l~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~ 511 (1284)
T 3g5u_A 432 TVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMK 511 (1284)
T ss_dssp HHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHH
T ss_conf 99998078899973899999987757999998654898688753776699997457989999999999998296999974
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCC
Q ss_conf 89867885689999889259999999999713999899826678999897999999999871897599981492365306
Q 000856 1134 LPNAYKTPVGERGVQLSGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGV 1213 (1252)
Q Consensus 1134 lp~Gldt~vge~G~~LSgGQkQRlalARALl~~p~ILiLDEpTSaLD~~te~~i~~~l~~~~~~~TvI~IsHrl~ti~~~ 1213 (1252)
+|+|+||.+|++|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.+++..+++|+|+||||++++..|
T Consensus 512 l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~~ 591 (1284)
T 3g5u_A 512 LPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNA 591 (1284)
T ss_dssp STTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCC
T ss_conf 65633450147878659999999999999952999899979877779999999999999973999899994077899749
Q ss_pred CEEEEEECCEEEEECCHHHHHCCCCCHHHHHHHHHH
Q ss_conf 989999497798814924662099853599997742
Q 000856 1214 DCIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1214 D~I~vl~~G~ive~G~~~eLl~~~~g~y~~l~~~q~ 1249 (1252)
|+|+||++|+++|.|+|++|+++ +|.|++++..|.
T Consensus 592 d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 626 (1284)
T 3g5u_A 592 DVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQT 626 (1284)
T ss_dssp SEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC
T ss_pred CEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 98999989999997889999867-877999999743
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=738.51 Aligned_cols=571 Identities=28% Similarity=0.427 Sum_probs=514.1
Q ss_pred CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 70089987712014589999999999998867889999999997301158874244368999999999999999999999
Q 000856 23 SLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSSY 102 (1252)
Q Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 102 (1252)
...+++++++.+++++ .+++++++.++.+++.+..+++++.++|.+.... +. ..+..+++.++++.++..++.+
T Consensus 22 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~ 95 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTF-TLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPR-RF----DLLPRYMLILGTIYALTSLLFW 95 (598)
T ss_dssp HHHHHHHGGGTGGGHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-CG----GGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CH----HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999-9999999999999999999999999999997368-88----9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998299011302478025899999349999999999999999899999999999998
Q 000856 103 AEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV 182 (1252)
Q Consensus 103 ~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~i~~~~ 182 (1252)
++.++..+.+.++..++|.++|++++++|++||++. ++|++++|+++|++.+++.+...+..++..++.+++.+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~ 174 (598)
T 3qf4_B 96 LQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRT-PHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFR 174 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHHS-CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999977999997688-8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96999999999999999999999999989999999999999999999981699999971369999999999999999999
Q 000856 183 SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGY 262 (1252)
Q Consensus 183 ~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 262 (1252)
++|.+++++++++|++.++..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...
T Consensus 175 ~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 254 (598)
T 3qf4_B 175 VNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGT 254 (598)
T ss_dssp HCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999973799999748709999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999988789999999999999999999999708659889999999999988989998999999999999999999997
Q 000856 263 KAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEII 342 (1252)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 342 (1252)
+..+..+...++..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+.++..+.+|+.+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 334 (598)
T 3qf4_B 255 KAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEIL 334 (598)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999859978999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 02998878999987678876408999688988999997430120388608989999858998189999999514679985
Q 000856 343 KQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAG 422 (1252)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 422 (1252)
+.+++.+.. .....++..+.|+++||+|+|++ +.++|+|+||++++|++++|+||||||||||+++|.|+++|++|
T Consensus 335 ~~~~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G 410 (598)
T 3qf4_B 335 DLEEEKDDP--DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRG 410 (598)
T ss_dssp TSCCCCCCS--SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEE
T ss_pred CCCCCCCCC--CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE
T ss_conf 688777777--77777777771899998997799--98601222799869988999899999699999999458579980
Q ss_pred EEEECCCCCCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 89889931667788988320147736787761119999715999999999999999953799885099975441259999
Q 000856 423 HVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGV 502 (1252)
Q Consensus 423 ~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~v~~~g~ 502 (1252)
+|.+||.|+++++..++|++++||+|+|++|++|++||+.++++..+++++.++++.++++++++.+|+|++|.+|++|.
T Consensus 411 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~ 490 (598)
T 3qf4_B 411 QILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGE 490 (598)
T ss_dssp EEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHT
T ss_pred EEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCC
T ss_conf 89999998301889999841089907982324639999744799999999999999969788897464532364227889
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCEEEEEECCEEEEE
Q ss_conf 88968999999999860099888871777799967499999999986189729998159420110397999959889783
Q 000856 503 QLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVET 582 (1252)
Q Consensus 503 ~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~ 582 (1252)
+||||||||++||||++++|+++|||||||+||+++++.+.+.++++.+++|+|+||||++.+..||+|++|++|+++++
T Consensus 491 ~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 570 (598)
T 3qf4_B 491 DLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEM 570 (598)
T ss_dssp TSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 87999999999999996499999998976679999999999999998089989999427789971998999989999987
Q ss_pred CCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 4957897503213999999873
Q 000856 583 GTHEELIAKAGAYASLIRFQEM 604 (1252)
Q Consensus 583 g~~~~l~~~~~~~~~~~~~~~~ 604 (1252)
|+|+|++++++.|++++..|..
T Consensus 571 g~~~~l~~~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 571 GKHDELIQKRGFYYELFTSQYG 592 (598)
T ss_dssp SCHHHHHHTTCHHHHHHHHHHG
T ss_pred CCHHHHHHCCCHHHHHHHHHHH
T ss_conf 7899998678779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=734.58 Aligned_cols=573 Identities=27% Similarity=0.361 Sum_probs=512.2
Q ss_pred CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87008998771201458999999999999886788999999999730115887424436899999999999999999999
Q 000856 22 QSLPFFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTDIHKMTHEVCKYALYFVYLGLIVCFSS 101 (1252)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 101 (1252)
+...++++++|.+++++ .++++.++.++.+++.+..+++++.++|...... + ...+..++++++++.++..++.
T Consensus 7 g~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~ 80 (587)
T 3qf4_A 7 GGGGSKTLARYLKPYWI-FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG-D----FSLVLKTGILMLIVALIGAVGG 80 (587)
T ss_dssp -CCCCCCGGGGTGGGHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-C----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85349999999999999-9999999999999999999999999999987369-8----7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999829901130247802589999934999999999999999989999999999999
Q 000856 102 YAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF 181 (1252)
Q Consensus 102 ~~~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~i~~~ 181 (1252)
++..++..+.+.++..++|.++|++++++|+.+|++. ++|++++|+++|++.+++++...+..++..++.+++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~ 159 (587)
T 3qf4_A 81 IGCTVFASYASQNFGADLRRDLFRKVLSFSISNVNRF-HTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAV 159 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999978897997658-889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 89699999999999999999999999998999999999999999999998169999997136999999999999999999
Q 000856 182 VSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLG 261 (1252)
Q Consensus 182 ~~~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~ 261 (1252)
.++|.+++++++.+|++.++..++.++..+..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+..
T Consensus 160 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 239 (587)
T 3qf4_A 160 SINVKLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSI 239 (587)
T ss_dssp HHCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999998559999986214999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998878999999999999999999999970865988999999999998898999899999999999999999999
Q 000856 262 YKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEI 341 (1252)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 341 (1252)
.+..+..+...++..++..+..++++|+|++++.+|.++.|.+++++.+......|+..+...+..+.++.++.+|+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 319 (587)
T 3qf4_A 240 ISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEV 319 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999984993899999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 70299887899998767887640899968898899999743012038860898999985899818999999951467998
Q 000856 342 IKQKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNA 421 (1252)
Q Consensus 342 l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 421 (1252)
++.+++.+... .....++..+.|+++||+|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++
T Consensus 320 l~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~ 397 (587)
T 3qf4_A 320 LNEKPAIEEAD-NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPER 397 (587)
T ss_dssp HHCCCSCCCCT-TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSE
T ss_pred HCCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 76897657887-765668888807997889984899-9764211179986998899989999979999999927866998
Q ss_pred CEEEECCCCCCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 58988993166778898832014773678776111999971599999999999999995379988509997544125999
Q 000856 422 GHVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERG 501 (1252)
Q Consensus 422 G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~v~~~g 501 (1252)
|+|.+||.|+++++..++|++++||+|+|++|++|++||+.++.++.+++++.++++.+++++++..+|+|++|.++++|
T Consensus 398 G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~ 477 (587)
T 3qf4_A 398 GRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGG 477 (587)
T ss_dssp EEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSS
T ss_pred CEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCC
T ss_conf 67989999834078999984138977898676755999985248899999999999996849999756531212751898
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCEEEEEECCEEEE
Q ss_conf 98896899999999986009988887177779996749999999998618972999815942011039799995988978
Q 000856 502 VQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVE 581 (1252)
Q Consensus 502 ~~LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~ 581 (1252)
.+||||||||++||||++++|++++||||||+||+++++.+++.++++.+++|+|+||||++.+..||+|++|++|++++
T Consensus 478 ~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~ 557 (587)
T 3qf4_A 478 RNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAG 557 (587)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEE
T ss_conf 99299999999999999729999999797544799999999999998679998999822768898199899998998999
Q ss_pred ECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 3495789750321399999987
Q 000856 582 TGTHEELIAKAGAYASLIRFQE 603 (1252)
Q Consensus 582 ~g~~~~l~~~~~~~~~~~~~~~ 603 (1252)
.|+|+|+++.++.|.+++..|.
T Consensus 558 ~g~~~el~~~~~~~~~~~~~~~ 579 (587)
T 3qf4_A 558 FGTHKELLEHCKPYREIYESQF 579 (587)
T ss_dssp EECHHHHHHHCHHHHHHHHHHC
T ss_pred ECCHHHHHHCCCHHHHHHHHHH
T ss_conf 7889999867839999999984
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=732.20 Aligned_cols=573 Identities=31% Similarity=0.431 Sum_probs=508.4
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89987712014589999999999998867889999999997301158874--2443689999999999999999999999
Q 000856 26 FFQLFSFADKYDWCLMIFGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQTD--IHKMTHEVCKYALYFVYLGLIVCFSSYA 103 (1252)
Q Consensus 26 ~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 103 (1252)
++++++|.+++++ .++++++++++.+++.+..+++++.++|.+...... ..........+++.++++.++..++.++
T Consensus 2 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (578)
T 4a82_A 2 IKRYLQFVKPYKY-RIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFI 80 (578)
T ss_dssp HHHHHHHHGGGHH-HHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7999999889999-999999999999999999999999999999816871146778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999982990113024780258999993499999999999999998999999999999989
Q 000856 104 EIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS 183 (1252)
Q Consensus 104 ~~~~~~~~~~~~~~~lR~~~~~~i~~~~~~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 183 (1252)
+.++..+.+.++..++|.++|++++++|++||++. ++|++++|+++|++.+++++...+..++..++.+++++++++.+
T Consensus 81 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 159 (578)
T 4a82_A 81 RQYLAQWTSNKILYDIRKKLYNHLQALSARFYANN-QVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFL 159 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTS-CHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999987899997689-86999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69999999999999999999999999899999999999999999999816999999713699999999999999999999
Q 000856 184 AWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYK 263 (1252)
Q Consensus 184 ~~~lali~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 263 (1252)
+|.++++.++.+|++.++..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+
T Consensus 160 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 239 (578)
T 4a82_A 160 DVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALK 239 (578)
T ss_dssp CTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999999999999999999999999999999824999998166499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999887899999999999999999999997086598899999999999889899989999999999999999999970
Q 000856 264 AGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGVTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIK 343 (1252)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 343 (1252)
..+..+...++..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..+.++..+.+|+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~ 319 (578)
T 4a82_A 240 HTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLID 319 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999998599589999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 29988789999876788764089996889889999974301203886089899998589981899999995146799858
Q 000856 344 QKPSIIQDPTNGRCLDEVNGNIEFKNVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNAGH 423 (1252)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~~~l~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 423 (1252)
.+++.+... .....+...+.|+++||+|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+
T Consensus 320 ~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 320 EDYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 897666787-766667778807999999975899-974134337998799999998999985999999984678899967
Q ss_pred EEECCCCCCCCCHHHHHHHCEEECCCCCCCHHCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 98899316677889883201477367877611199997159999999999999999537998850999754412599998
Q 000856 424 VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPEATMAEVEAAASAANAHSFITLLPNGYSTQVGERGVQ 503 (1252)
Q Consensus 424 i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~v~~~g~~ 503 (1252)
|.+||.|+++++..++|++++||+|+|++|++|++||+.+|.+..+++++.++++.++++++++.+|+|++|.+|++|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCEEEEEECCEEEEEC
Q ss_conf 89689999999998600998888717777999674999999999861897299981594201103979999598897834
Q 000856 504 LSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTVAVIQQGQVVETG 583 (1252)
Q Consensus 504 LSgGqkqrialARal~~~~~ililDe~ts~lD~~~~~~i~~~l~~~~~~~t~i~ith~~~~~~~~d~i~~l~~G~i~~~g 583 (1252)
||||||||++||||++++|++++||||||+||+++++.+.+.++++.+++|+|+||||++.+..||+|++|++|++++.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHCCCCHHHHHHHH
Q ss_conf 9578975032139999998
Q 000856 584 THEELIAKAGAYASLIRFQ 602 (1252)
Q Consensus 584 ~~~~l~~~~~~~~~~~~~~ 602 (1252)
+|+|+++.++.|.+++..|
T Consensus 558 ~~~el~~~~~~~~~~~~~q 576 (578)
T 4a82_A 558 THRELIAKQGAYEHLYSIQ 576 (578)
T ss_dssp CHHHHHHTTSHHHHHHTTT
T ss_pred CHHHHHHCCCHHHHHHHHH
T ss_conf 8999985883899999850
No 8
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=730.34 Aligned_cols=571 Identities=29% Similarity=0.449 Sum_probs=512.5
Q ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55899997760992579999999999999888999999999999984049711334268999999999999999999999
Q 000856 670 DGYFLRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQH 749 (1252)
Q Consensus 670 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (1252)
...+++++++.++.++.+..+.+..++.+++....+++++.+++....... ......+..+++++.++..++.+...
T Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR---FDLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---GGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999999999999999999999999973688---89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998389775444677737999999631999999999889999999999999999999997
Q 000856 750 YFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVE 829 (1252)
Q Consensus 750 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 829 (1252)
++..+.+.++..++|..++++++++|++||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 176 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVN 176 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997799999768--8889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999883388999999999999999986227999971538999999999997699999999
Q 000856 830 WRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRR 909 (1252)
Q Consensus 830 ~~l~li~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ika~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1252)
|++++++++.+|+.+++.....+..++..++.++...+....+.|.++|+++||+|++++.+.+++.+..++..+...+.
T Consensus 177 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 256 (598)
T 3qf4_B 177 VILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKA 256 (598)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997379999974870999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999999981787989999999999999999999999799999989999999998435
Q 000856 910 SLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDR 989 (1252)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~ 989 (1252)
.....+...+..++..+..++++++|.+++..|.++.|.+++++.+......++..+...+..+..+..+.+|+.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 336 (598)
T 3qf4_B 257 QIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL 336 (598)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985997899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 68889999999988776651999958998899888442000269983795999984999986889999852377997569
Q 000856 990 STRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKV 1069 (1252)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1069 (1252)
+++.+. +...+.++..+.|+++||+|+|++ +.++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|
T Consensus 337 ~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 412 (598)
T 3qf4_B 337 EEEKDD--PDAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQI 412 (598)
T ss_dssp CCCCCC--SSCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEE
T ss_pred CCCCCC--CCCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 877777--777777777771899998997799--9860122279986998899989999969999999945857998089
Q ss_pred EECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 98993168999788732208880466557555888852299999999999999980721258608986788568999988
Q 000856 1070 MIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQL 1149 (1252)
Q Consensus 1070 ~idG~di~~~~~~~lR~~i~~V~Q~~~LF~gTIreNL~~g~~~~sd~~i~~al~~a~l~~~i~~lp~Gldt~vge~G~~L 1149 (1252)
.+||+|+++++.+.+|++++||||+|.+|++|++||+.++.++.++++++++++.++++++++.+|+|+||.++++|.+|
T Consensus 413 ~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~L 492 (598)
T 3qf4_B 413 LVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDL 492 (598)
T ss_dssp EETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTS
T ss_pred EECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 99999830188999984108990798232463999974479999999999999996978889746453236422788987
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECC
Q ss_conf 92599999999997139998998266789998979999999998718975999814923653069899994977988149
Q 000856 1150 SGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1150 SgGQkQRlalARALl~~p~ILiLDEpTSaLD~~te~~i~~~l~~~~~~~TvI~IsHrl~ti~~~D~I~vl~~G~ive~G~ 1229 (1252)
|||||||+|||||++++|+|||||||||+||++++..+++.+.+..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 493 SgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 572 (598)
T 3qf4_B 493 SQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK 572 (598)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999649999999897667999999999999999808998999942778997199899998999998778
Q ss_pred HHHHHCCCCCHHHHHHHHHHH
Q ss_conf 246620998535999977420
Q 000856 1230 HSELVSRPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1230 ~~eLl~~~~g~y~~l~~~q~~ 1250 (1252)
|+||+++ +|.|++++..|..
T Consensus 573 ~~~l~~~-~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 573 HDELIQK-RGFYYELFTSQYG 592 (598)
T ss_dssp HHHHHHT-TCHHHHHHHHHHG
T ss_pred HHHHHHC-CCHHHHHHHHHHH
T ss_conf 9999867-8779999999764
No 9
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=729.99 Aligned_cols=567 Identities=24% Similarity=0.382 Sum_probs=501.7
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97760992579999999999999888999999999999984049711334268999999999999999999999999999
Q 000856 676 LLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKTKEFVFIYIGAGLYAVVAYLIQHYFFSIM 755 (1252)
Q Consensus 676 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (1252)
++++.++.++.+..+.+..++.+++....+++++.+++....... ......+..+++.+.++..++.+...++..+.
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999873698---79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998389775444677737999999631999999999889999999999999999999997799999
Q 000856 756 GENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVEWRVSLL 835 (1252)
Q Consensus 756 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~li 835 (1252)
+.+...++|..+++|+++.|..||++ +++|++++|+++|++.++..+...+..++...+.+++++++++.++|.++++
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997889799765--8889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999883388999999999999999986227999971538999999999997699999999999999
Q 000856 836 ILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRRSLTAGI 915 (1252)
Q Consensus 836 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ika~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1252)
+++.+|+++++.....+..++..++.++...+....+.|.++|+++||+|++++.+.+++.+..++..+...+.......
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999999999981787989999999999999999999999799999989999999998435688899
Q 000856 916 LFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDRSTRIDP 995 (1252)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 995 (1252)
...+..++..+..++++|+|..++..|.++.|.++++..+......++..+...+..+.++..+.+|+.+.++.+++.+.
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 99999988776651999958998899888442000269983795999984999986889999852377997569989931
Q 000856 996 DDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKD 1075 (1252)
Q Consensus 996 ~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d 1075 (1252)
.. ...+.++..+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+||+|
T Consensus 329 ~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~ 406 (587)
T 3qf4_A 329 AD-NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELD 406 (587)
T ss_dssp CT-TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSB
T ss_pred CC-CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 87-765668888807997889984899-9764211179986998899989999979999999927866998679899998
Q ss_pred CCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 68999788732208880466557555888852299999999999999980721258608986788568999988925999
Q 000856 1076 IRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQLSGGQKQ 1155 (1252)
Q Consensus 1076 i~~~~~~~lR~~i~~V~Q~~~LF~gTIreNL~~g~~~~sd~~i~~al~~a~l~~~i~~lp~Gldt~vge~G~~LSgGQkQ 1155 (1252)
+++++.+.+|++++||||+|.+|++|++|||.++.+..++++++++++.+++++++..+|+|+||.++++|.+|||||||
T Consensus 407 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQ 486 (587)
T 3qf4_A 407 VRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQ 486 (587)
T ss_dssp GGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHH
T ss_pred CCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHH
T ss_conf 34078999984138977898676755999985248899999999999996849999756531212751898992999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHC
Q ss_conf 99999997139998998266789998979999999998718975999814923653069899994977988149246620
Q 000856 1156 RIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVS 1235 (1252)
Q Consensus 1156 RlalARALl~~p~ILiLDEpTSaLD~~te~~i~~~l~~~~~~~TvI~IsHrl~ti~~~D~I~vl~~G~ive~G~~~eLl~ 1235 (1252)
|+|||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|+|+|+||++
T Consensus 487 rv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~ 566 (587)
T 3qf4_A 487 RLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLE 566 (587)
T ss_dssp HHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999729999999797544799999999999998679998999822768898199899998998999788999986
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 998535999977420
Q 000856 1236 RPDGAYSRLLQLQHH 1250 (1252)
Q Consensus 1236 ~~~g~y~~l~~~q~~ 1250 (1252)
+ ++.|++++..|..
T Consensus 567 ~-~~~~~~~~~~~~~ 580 (587)
T 3qf4_A 567 H-CKPYREIYESQFG 580 (587)
T ss_dssp H-CHHHHHHHHHHC-
T ss_pred C-CCHHHHHHHHHHC
T ss_conf 7-8399999999846
No 10
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=727.65 Aligned_cols=571 Identities=31% Similarity=0.461 Sum_probs=504.6
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999776099257999999999999988899999999999998404971133426----8999999999999999999999
Q 000856 674 LRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMACMIEVFYYRNPASMERKT----KEFVFIYIGAGLYAVVAYLIQH 749 (1252)
Q Consensus 674 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 749 (1252)
++++++.++.++.+..+.+..++...+....+++++.+++.............. ..+...++.+.++..++.+...
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998389775444677737999999631999999999889999999999999999999997
Q 000856 750 YFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIADRISVILQNMTSLLTSFIVAFIVE 829 (1252)
Q Consensus 750 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~~~g~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 829 (1252)
+...+.+.+...++|..+++|+++.|.+||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999883388999999999999999986227999971538999999999997699999999
Q 000856 830 WRVSLLILGTYPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQSQTLRR 909 (1252)
Q Consensus 830 ~~l~li~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ika~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1252)
|+++++.++.+|+.+++.....+..++..++......+....+.|.++|+++||+|++++.+.+++.+..++..+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999999981787989999999999999999999999799999989999999998435
Q 000856 910 SLTAGILFGISQFALHASEALILWYGVHLVGKGVSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESVGSVFSTLDR 989 (1252)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~ 989 (1252)
.........+..++..+..++++++|.+++..|.++.|.++++..+......++..+...+..+.++..+.+|+.+.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 68889999999988776651999958998899888442000269983795999984999986889999852377997569
Q 000856 990 STRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDVVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKV 1069 (1252)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~g~I~~~nVsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1069 (1252)
+++.+.. ....+.++..+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 321 DYDIKNG-VGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCSSCCC-TTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCC-CCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 9766678-7766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 98993168999788732208880466557555888852299999999999999980721258608986788568999988
Q 000856 1070 MIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVVEAARAANVHGFVSALPNAYKTPVGERGVQL 1149 (1252)
Q Consensus 1070 ~idG~di~~~~~~~lR~~i~~V~Q~~~LF~gTIreNL~~g~~~~sd~~i~~al~~a~l~~~i~~lp~Gldt~vge~G~~L 1149 (1252)
.+||.|+++++.+.+|++++||||+|.+|++|++||+.+|.+..++++++++++.+++++++..+|+|+||.+|++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECC
Q ss_conf 92599999999997139998998266789998979999999998718975999814923653069899994977988149
Q 000856 1150 SGGQKQRIAIARAVLKNPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGS 1229 (1252)
Q Consensus 1150 SgGQkQRlalARALl~~p~ILiLDEpTSaLD~~te~~i~~~l~~~~~~~TvI~IsHrl~ti~~~D~I~vl~~G~ive~G~ 1229 (1252)
|||||||++||||++++|++++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHCCCCCHHHHHHHHHH
Q ss_conf 24662099853599997742
Q 000856 1230 HSELVSRPDGAYSRLLQLQH 1249 (1252)
Q Consensus 1230 ~~eLl~~~~g~y~~l~~~q~ 1249 (1252)
|+||+++ ++.|+++|+.|.
T Consensus 559 ~~el~~~-~~~~~~~~~~q~ 577 (578)
T 4a82_A 559 HRELIAK-QGAYEHLYSIQN 577 (578)
T ss_dssp HHHHHHT-TSHHHHHHTTTT
T ss_pred HHHHHHC-CCHHHHHHHHHC
T ss_conf 9999858-838999998506
Done!