Query 000858
Match_columns 1251
No_of_seqs 513 out of 3770
Neff 5.6
Searched_HMMs 13730
Date Tue Mar 26 16:36:58 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000858.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_628-632//hhsearch_scop/000858hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 2.1E-44 0 313.3 23.1 247 940-1216 3-253 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 2.9E-43 0 305.7 21.7 240 943-1212 3-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 9.5E-44 0 309.0 17.4 256 946-1214 1-258 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 3.9E-41 2.8E-45 291.4 13.3 257 945-1214 3-263 (265)
5 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 4.6E-27 3.3E-31 196.6 13.1 168 981-1154 37-206 (246)
6 d1ofha_ c.37.1.20 (A:) HslU {H 99.9 5.1E-26 3.7E-30 189.6 12.1 182 950-1131 15-213 (309)
7 d1w44a_ c.37.1.11 (A:) NTPase 99.9 8E-27 5.8E-31 195.0 -0.1 161 969-1135 108-277 (321)
8 d1in4a2 c.37.1.20 (A:17-254) H 99.9 1.6E-20 1.2E-24 152.5 22.7 221 946-1215 6-234 (238)
9 d1gxca_ b.26.1.2 (A:) Chk2 kin 99.9 2E-21 1.4E-25 158.7 12.9 106 133-239 1-116 (116)
10 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 7E-21 5.1E-25 155.0 14.5 216 445-881 3-234 (256)
11 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.9 2.8E-19 2.1E-23 144.1 21.4 223 945-1215 5-235 (239)
12 d1e32a2 c.37.1.20 (A:201-458) 99.9 3.1E-22 2.3E-26 164.1 6.1 241 451-912 1-257 (258)
13 d1r7ra3 c.37.1.20 (A:471-735) 99.8 8.7E-21 6.3E-25 154.3 4.4 218 450-888 3-237 (265)
14 d1ixza_ c.37.1.20 (A:) AAA dom 99.8 7.9E-20 5.7E-24 147.9 8.5 216 447-883 2-233 (247)
15 d1iqpa2 c.37.1.20 (A:2-232) Re 99.8 1.4E-17 1E-21 132.8 17.2 188 945-1166 20-215 (231)
16 d1njfa_ c.37.1.20 (A:) delta p 99.8 6.6E-17 4.8E-21 128.2 17.9 184 946-1166 9-221 (239)
17 d1lgpa_ b.26.1.2 (A:) Cell cyc 99.8 2.5E-18 1.8E-22 137.8 10.2 103 132-237 2-112 (113)
18 d1sxjc2 c.37.1.20 (C:12-238) R 99.8 2.8E-17 2E-21 130.8 15.2 204 945-1212 10-225 (227)
19 d1r6bx2 c.37.1.20 (X:169-436) 99.7 2.5E-16 1.8E-20 124.3 19.1 223 947-1216 16-266 (268)
20 d1sxja2 c.37.1.20 (A:295-547) 99.7 1.7E-16 1.3E-20 125.4 16.6 197 945-1162 10-224 (253)
21 d1fnna2 c.37.1.20 (A:1-276) CD 99.7 1.2E-14 8.4E-19 113.1 23.7 222 949-1216 16-274 (276)
22 d1sxjb2 c.37.1.20 (B:7-230) Re 99.7 1.1E-15 7.7E-20 120.1 16.2 183 945-1165 11-206 (224)
23 d1sxjd2 c.37.1.20 (D:26-262) R 99.7 3.3E-15 2.4E-19 116.8 18.4 189 945-1167 8-215 (237)
24 d1sxje2 c.37.1.20 (E:4-255) Re 99.7 5.1E-15 3.7E-19 115.5 17.4 180 945-1154 7-227 (252)
25 d1r6bx3 c.37.1.20 (X:437-751) 99.7 2.5E-14 1.8E-18 110.8 19.6 205 950-1171 23-281 (315)
26 d1qvra3 c.37.1.20 (A:536-850) 99.6 1.9E-14 1.4E-18 111.6 18.6 206 950-1172 24-287 (315)
27 d1w5sa2 c.37.1.20 (A:7-293) CD 99.6 2.8E-14 2E-18 110.5 18.4 230 949-1214 16-286 (287)
28 d1qvra2 c.37.1.20 (A:149-535) 99.6 8.5E-15 6.2E-19 114.0 15.1 196 947-1167 20-242 (387)
29 d1g41a_ c.37.1.20 (A:) HslU {H 99.6 3.4E-14 2.5E-18 109.9 16.9 179 951-1129 16-345 (443)
30 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 3.8E-14 2.8E-18 109.6 15.7 165 945-1131 3-214 (333)
31 d1svma_ c.37.1.20 (A:) Papillo 99.6 4.2E-17 3.1E-21 129.5 -0.2 165 985-1173 155-338 (362)
32 d1um8a_ c.37.1.20 (A:) ClpX {H 99.6 1.4E-14 1.1E-18 112.4 11.5 181 950-1130 18-280 (364)
33 d1jbka_ c.37.1.20 (A:) ClpB, A 99.6 7.5E-15 5.5E-19 114.4 8.9 157 947-1128 20-194 (195)
34 d1l8qa2 c.37.1.20 (A:77-289) C 99.5 1.8E-12 1.3E-16 98.4 20.0 192 945-1165 6-210 (213)
35 d1a5ta2 c.37.1.20 (A:1-207) de 99.5 6.5E-12 4.7E-16 94.6 19.7 169 953-1158 6-202 (207)
36 d1dmza_ b.26.1.2 (A:) Phosphot 99.4 1.2E-12 8.7E-17 99.5 10.2 93 133-226 4-111 (158)
37 d1g6ga_ b.26.1.2 (A:) Phosphot 99.4 3.5E-12 2.6E-16 96.4 12.0 98 133-234 4-118 (127)
38 d1ny5a2 c.37.1.20 (A:138-384) 99.3 5.4E-12 4E-16 95.1 9.8 196 951-1168 2-232 (247)
39 d2brfa1 b.26.1.2 (A:8-108) Pol 99.3 3.2E-11 2.3E-15 89.9 10.9 93 135-233 1-97 (101)
40 d2piea1 b.26.1.2 (A:13-139) Ub 99.2 8.1E-11 5.9E-15 87.2 11.2 102 133-239 5-116 (127)
41 d2ff4a3 b.26.1.2 (A:284-382) P 99.1 4.1E-10 3E-14 82.5 11.8 92 132-234 4-96 (99)
42 d1gvnb_ c.37.1.21 (B:) Plasmid 99.1 5.1E-12 3.7E-16 95.3 1.6 68 946-1023 4-71 (273)
43 d1uhta_ b.26.1.2 (A:) FHA doma 99.1 3.6E-10 2.7E-14 82.8 9.4 81 147-235 27-110 (118)
44 d2affa1 b.26.1.2 (A:3-100) Ant 99.0 1.2E-09 8.6E-14 79.4 10.7 83 143-235 14-97 (98)
45 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.0 3.8E-07 2.8E-11 62.5 23.1 189 946-1167 9-254 (283)
46 d1d2na_ c.37.1.20 (A:) Hexamer 99.0 4.4E-11 3.2E-15 89.0 2.8 55 689-746 88-152 (246)
47 d1mzka_ b.26.1.2 (A:) Kinase a 99.0 6.8E-10 4.9E-14 81.0 8.6 73 153-228 31-112 (122)
48 d2gnoa2 c.37.1.20 (A:11-208) g 99.0 4.1E-09 3E-13 75.7 12.3 117 983-1121 14-140 (198)
49 d1w44a_ c.37.1.11 (A:) NTPase 98.9 1.4E-10 1E-14 85.5 1.6 91 689-842 172-275 (321)
50 d2g1la1 b.26.1.2 (A:498-599) K 98.9 1.6E-08 1.2E-12 71.7 11.9 81 148-234 20-101 (102)
51 d1ofha_ c.37.1.20 (A:) HslU {H 98.8 1.9E-09 1.4E-13 78.0 4.9 68 461-531 19-86 (309)
52 d1wlna1 b.26.1.2 (A:8-114) Afa 98.6 1.5E-07 1.1E-11 65.1 9.4 79 148-235 25-106 (107)
53 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.2 9.1E-06 6.6E-10 53.2 10.3 120 986-1120 2-164 (178)
54 d2a5yb3 c.37.1.20 (B:109-385) 97.9 0.00022 1.6E-08 43.9 13.1 174 950-1161 21-228 (277)
55 d1in4a2 c.37.1.20 (A:17-254) H 97.8 7.9E-05 5.7E-09 46.9 9.5 65 452-530 7-71 (238)
56 d1sxja2 c.37.1.20 (A:295-547) 97.8 0.0011 7.8E-08 39.2 15.8 77 452-532 12-90 (253)
57 d1qvra2 c.37.1.20 (A:149-535) 97.6 5.5E-05 4E-09 47.9 6.0 126 703-880 114-246 (387)
58 d1r6bx2 c.37.1.20 (X:169-436) 97.6 5.6E-05 4.1E-09 47.8 5.7 134 690-878 99-240 (268)
59 d1p9ra_ c.37.1.11 (A:) Extrace 97.5 0.0007 5.1E-08 40.5 10.5 96 943-1053 132-237 (401)
60 d1lw7a2 c.37.1.1 (A:220-411) T 97.5 2.7E-05 1.9E-09 50.0 3.2 38 984-1021 7-44 (192)
61 d1tf7a2 c.37.1.11 (A:256-497) 97.5 0.0019 1.4E-07 37.6 12.3 76 983-1058 25-131 (242)
62 d1kaga_ c.37.1.2 (A:) Shikimat 97.5 8.1E-05 5.9E-09 46.8 5.2 32 985-1016 3-34 (169)
63 d1u94a1 c.37.1.11 (A:6-268) Re 97.4 0.00084 6.1E-08 39.9 9.5 73 985-1057 55-146 (263)
64 d1okkd2 c.37.1.10 (D:97-303) G 97.3 0.0035 2.6E-07 35.7 12.0 115 985-1107 7-146 (207)
65 d1rkba_ c.37.1.1 (A:) Adenylat 97.3 0.00013 9.7E-09 45.3 4.4 32 985-1016 5-36 (173)
66 d1viaa_ c.37.1.2 (A:) Shikimat 97.2 9.3E-05 6.8E-09 46.4 3.3 32 985-1016 1-32 (161)
67 d1cr2a_ c.37.1.11 (A:) Gene 4 97.2 0.0031 2.3E-07 36.1 10.9 38 981-1018 32-73 (277)
68 d2qy9a2 c.37.1.10 (A:285-495) 97.2 0.0056 4.1E-07 34.4 13.0 142 983-1131 8-177 (211)
69 d1xp8a1 c.37.1.11 (A:15-282) R 97.2 0.0032 2.3E-07 36.1 10.7 111 985-1097 58-192 (268)
70 d1e6ca_ c.37.1.2 (A:) Shikimat 97.2 0.00013 9.8E-09 45.3 3.5 32 985-1016 3-34 (170)
71 d1vmaa2 c.37.1.10 (A:82-294) G 97.1 0.0052 3.8E-07 34.6 11.4 35 983-1017 10-47 (213)
72 d2iyva1 c.37.1.2 (A:2-166) Shi 97.1 0.00016 1.2E-08 44.7 3.4 31 986-1016 3-33 (165)
73 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.0 0.00015 1.1E-08 44.9 2.9 36 985-1020 5-40 (176)
74 d1tf7a1 c.37.1.11 (A:14-255) C 97.0 0.0081 5.9E-07 33.3 11.5 96 981-1079 23-158 (242)
75 d1ixsb2 c.37.1.20 (B:4-242) Ho 97.0 0.00082 6E-08 40.0 6.4 64 452-529 7-70 (239)
76 d1qhxa_ c.37.1.3 (A:) Chloramp 97.0 0.00056 4.1E-08 41.1 5.1 33 985-1017 4-36 (178)
77 d1zaka1 c.37.1.1 (A:3-127,A:15 97.0 0.00029 2.1E-08 43.1 3.5 32 984-1015 3-34 (189)
78 d1jbka_ c.37.1.20 (A:) ClpB, A 96.9 0.00039 2.9E-08 42.2 4.1 74 703-817 114-192 (195)
79 d1j8yf2 c.37.1.10 (F:87-297) G 96.9 0.01 7.5E-07 32.6 12.1 140 983-1132 11-177 (211)
80 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.9 0.00058 4.2E-08 41.0 4.9 32 984-1015 6-37 (194)
81 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.9 0.00061 4.5E-08 40.9 5.0 31 985-1015 4-34 (190)
82 d1zina1 c.37.1.1 (A:1-125,A:16 96.9 0.00057 4.1E-08 41.1 4.7 31 986-1016 2-32 (182)
83 d1knqa_ c.37.1.17 (A:) Glucona 96.9 0.00043 3.1E-08 41.9 4.0 33 984-1016 6-38 (171)
84 d1bifa1 c.37.1.7 (A:37-249) 6- 96.9 0.011 8.3E-07 32.3 12.4 33 985-1017 3-38 (213)
85 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.9 0.00086 6.2E-08 39.9 5.3 35 985-1021 7-41 (189)
86 d1w36d1 c.37.1.19 (D:2-360) Ex 96.8 0.004 2.9E-07 35.4 8.5 36 954-1006 150-185 (359)
87 d1ls1a2 c.37.1.10 (A:89-295) G 96.8 0.0078 5.7E-07 33.4 9.9 71 985-1055 11-104 (207)
88 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.8 0.0007 5.1E-08 40.5 4.6 24 985-1008 2-25 (189)
89 d2bdta1 c.37.1.25 (A:1-176) Hy 96.8 0.00058 4.2E-08 41.0 4.0 29 985-1013 3-31 (176)
90 d1teva_ c.37.1.1 (A:) UMP/CMP 96.8 0.00083 6E-08 40.0 4.6 36 984-1021 1-36 (194)
91 d2cdna1 c.37.1.1 (A:1-181) Ade 96.8 0.00084 6.1E-08 39.9 4.7 30 986-1015 2-31 (181)
92 d1ckea_ c.37.1.1 (A:) CMP kina 96.7 0.00076 5.5E-08 40.2 4.3 34 986-1021 5-38 (225)
93 d3adka_ c.37.1.1 (A:) Adenylat 96.7 0.00085 6.2E-08 39.9 4.5 36 985-1022 9-44 (194)
94 d1y63a_ c.37.1.1 (A:) Probable 96.7 0.00087 6.4E-08 39.8 4.6 28 984-1011 5-32 (174)
95 d1ukza_ c.37.1.1 (A:) Uridylat 96.7 0.00077 5.6E-08 40.2 4.3 31 985-1015 9-39 (196)
96 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.7 0.0011 7.7E-08 39.3 4.7 30 986-1015 2-31 (182)
97 d1g6oa_ c.37.1.11 (A:) Hexamer 96.7 0.0032 2.3E-07 36.0 7.2 69 985-1053 167-245 (323)
98 d1mo6a1 c.37.1.11 (A:1-269) Re 96.7 0.0087 6.3E-07 33.1 9.3 35 985-1019 61-98 (269)
99 d1akya1 c.37.1.1 (A:3-130,A:16 96.6 0.0012 8.6E-08 38.9 4.7 32 985-1016 3-34 (180)
100 d1yj5a2 c.37.1.1 (A:351-522) 5 96.5 0.0022 1.6E-07 37.1 5.5 62 983-1053 13-74 (172)
101 d1q3ta_ c.37.1.1 (A:) CMP kina 96.5 0.0013 9.7E-08 38.6 4.4 29 986-1014 5-33 (223)
102 d1e4va1 c.37.1.1 (A:1-121,A:15 96.5 0.0014 1.1E-07 38.4 4.5 30 986-1015 2-31 (179)
103 d1g41a_ c.37.1.20 (A:) HslU {H 96.5 0.0021 1.6E-07 37.2 5.1 76 461-540 19-97 (443)
104 d1m8pa3 c.37.1.15 (A:391-573) 96.3 0.002 1.5E-07 37.4 4.1 26 985-1010 7-32 (183)
105 d1x6va3 c.37.1.4 (A:34-228) Ad 96.2 0.00053 3.9E-08 41.3 0.9 28 985-1012 20-47 (195)
106 d1a1va1 c.37.1.14 (A:190-325) 96.2 0.021 1.5E-06 30.5 9.0 33 985-1017 9-41 (136)
107 d1sxje2 c.37.1.20 (E:4-255) Re 96.1 0.034 2.5E-06 29.1 13.1 71 704-821 131-201 (252)
108 d1szpa2 c.37.1.11 (A:145-395) 96.0 0.024 1.7E-06 30.2 8.5 39 981-1019 31-78 (251)
109 d1u0ja_ c.37.1.20 (A:) Rep 40 95.7 0.024 1.8E-06 30.1 7.4 57 984-1055 104-160 (267)
110 d1nlfa_ c.37.1.11 (A:) Hexamer 95.7 0.05 3.7E-06 28.0 12.2 136 983-1126 28-221 (274)
111 d1ly1a_ c.37.1.1 (A:) Polynucl 95.6 0.0042 3.1E-07 35.2 3.3 33 986-1019 4-36 (152)
112 d1um8a_ c.37.1.20 (A:) ClpX {H 95.4 0.013 9.5E-07 31.9 5.3 78 435-531 11-105 (364)
113 d2hyda1 c.37.1.12 (A:324-578) 95.4 0.062 4.5E-06 27.3 10.0 26 983-1008 43-68 (255)
114 d2fz4a1 c.37.1.19 (A:24-229) D 95.3 0.036 2.6E-06 28.9 7.3 50 951-1017 69-118 (206)
115 d1m7ga_ c.37.1.4 (A:) Adenosin 95.3 0.013 9.8E-07 31.8 5.0 38 984-1021 24-65 (208)
116 d1np6a_ c.37.1.10 (A:) Molybdo 95.1 0.015 1.1E-06 31.5 4.8 31 986-1016 4-37 (170)
117 d1yksa1 c.37.1.14 (A:185-324) 95.1 0.042 3.1E-06 28.5 7.1 35 982-1016 5-43 (140)
118 d1jj7a_ c.37.1.12 (A:) Peptide 94.9 0.085 6.2E-06 26.5 10.6 28 982-1009 38-65 (251)
119 d1h65a_ c.37.1.8 (A:) Chloropl 94.8 0.078 5.7E-06 26.7 7.8 70 984-1054 32-124 (257)
120 d1khta_ c.37.1.1 (A:) Adenylat 94.8 0.0087 6.3E-07 33.1 2.9 26 985-1010 2-27 (190)
121 d1lvga_ c.37.1.1 (A:) Guanylat 94.7 0.02 1.5E-06 30.6 4.5 30 986-1015 2-31 (190)
122 d1wb9a2 c.37.1.12 (A:567-800) 94.6 0.099 7.2E-06 26.0 11.5 103 985-1102 42-167 (234)
123 d1nksa_ c.37.1.1 (A:) Adenylat 94.6 0.022 1.6E-06 30.4 4.7 31 986-1016 3-36 (194)
124 d2pmka1 c.37.1.12 (A:467-707) 94.4 0.11 8.2E-06 25.6 11.0 27 983-1009 28-54 (241)
125 d1tuea_ c.37.1.20 (A:) Replica 94.3 0.038 2.8E-06 28.8 5.3 57 985-1055 54-110 (205)
126 d2g9na1 c.37.1.19 (A:21-238) I 94.3 0.12 8.5E-06 25.5 9.9 57 942-1001 8-66 (218)
127 d1rz3a_ c.37.1.6 (A:) Hypothet 94.2 0.049 3.6E-06 28.1 5.6 31 987-1017 25-58 (198)
128 d1gkya_ c.37.1.1 (A:) Guanylat 94.0 0.028 2E-06 29.7 4.0 29 986-1014 3-31 (186)
129 d1g2912 c.37.1.12 (1:1-240) Ma 93.9 0.14 1E-05 25.0 9.4 27 983-1009 28-54 (240)
130 d2fh5b1 c.37.1.8 (B:63-269) Si 93.9 0.14 1E-05 25.0 10.4 23 985-1007 1-23 (207)
131 d2gj8a1 c.37.1.8 (A:216-376) P 93.5 0.17 1.2E-05 24.5 8.2 22 986-1007 3-24 (161)
132 d3b60a1 c.37.1.12 (A:329-581) 93.4 0.17 1.2E-05 24.5 11.4 27 983-1009 40-66 (253)
133 d1wf3a1 c.37.1.8 (A:3-180) GTP 93.4 0.17 1.2E-05 24.5 10.8 22 986-1007 7-28 (178)
134 d1r6bx3 c.37.1.20 (X:437-751) 93.4 0.17 1.2E-05 24.4 7.6 61 462-530 28-88 (315)
135 d1gkub1 c.37.1.16 (B:1-250) He 93.3 0.17 1.3E-05 24.3 7.8 33 985-1017 59-94 (237)
136 d1lw7a2 c.37.1.1 (A:220-411) T 93.1 0.024 1.7E-06 30.2 2.4 37 491-529 6-42 (192)
137 d1v5wa_ c.37.1.11 (A:) Meiotic 93.0 0.057 4.2E-06 27.6 4.3 28 981-1008 34-61 (258)
138 d1nrjb_ c.37.1.8 (B:) Signal r 93.0 0.2 1.4E-05 24.0 8.5 23 986-1008 5-27 (209)
139 d1l2ta_ c.37.1.12 (A:) MJ0796 92.8 0.21 1.5E-05 23.8 9.6 26 983-1008 30-55 (230)
140 d1pjra1 c.37.1.19 (A:1-318) DE 92.6 0.049 3.6E-06 28.0 3.5 24 985-1008 25-49 (318)
141 d1kkma_ c.91.1.2 (A:) HPr kina 92.5 0.064 4.6E-06 27.3 4.0 33 984-1017 14-46 (176)
142 d1n0wa_ c.37.1.11 (A:) DNA rep 92.5 0.057 4.1E-06 27.6 3.7 28 981-1008 20-47 (242)
143 d1pzna2 c.37.1.11 (A:96-349) D 92.5 0.051 3.7E-06 27.9 3.4 36 983-1018 35-79 (254)
144 d1sq5a_ c.37.1.6 (A:) Pantothe 92.3 0.21 1.5E-05 23.8 6.4 40 981-1020 77-121 (308)
145 d2awna2 c.37.1.12 (A:4-235) Ma 92.3 0.24 1.8E-05 23.4 8.1 28 983-1010 25-52 (232)
146 d1ctqa_ c.37.1.8 (A:) cH-p21 R 92.2 0.14 1E-05 24.9 5.5 23 986-1008 5-27 (166)
147 d1ksha_ c.37.1.8 (A:) ADP-ribo 92.2 0.11 8E-06 25.7 4.8 22 986-1007 4-25 (165)
148 d1uj2a_ c.37.1.6 (A:) Uridine- 92.2 0.058 4.2E-06 27.5 3.4 26 986-1011 4-29 (213)
149 d1xjca_ c.37.1.10 (A:) Molybdo 92.2 0.12 8.5E-06 25.5 5.0 32 986-1017 3-37 (165)
150 d1gvnb_ c.37.1.21 (B:) Plasmid 92.1 0.021 1.5E-06 30.6 1.0 35 494-530 34-68 (273)
151 d3d31a2 c.37.1.12 (A:1-229) Su 92.1 0.25 1.9E-05 23.2 9.3 28 983-1010 25-52 (229)
152 d1znwa1 c.37.1.1 (A:20-201) Gu 92.1 0.058 4.2E-06 27.6 3.3 25 985-1009 3-27 (182)
153 d1htwa_ c.37.1.18 (A:) Hypothe 92.0 0.095 6.9E-06 26.1 4.4 30 982-1011 31-60 (158)
154 d1svma_ c.37.1.20 (A:) Papillo 92.0 0.054 3.9E-06 27.8 3.1 37 490-528 152-188 (362)
155 d1mv5a_ c.37.1.12 (A:) Multidr 91.9 0.27 1.9E-05 23.1 9.1 26 983-1008 27-52 (242)
156 d1v43a3 c.37.1.12 (A:7-245) Hy 91.8 0.27 2E-05 23.0 8.3 28 983-1010 31-58 (239)
157 d1r0wa_ c.37.1.12 (A:) Cystic 91.7 0.28 2E-05 23.0 10.4 28 982-1009 60-87 (281)
158 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.5 0.29 2.1E-05 22.8 6.7 23 985-1007 16-38 (177)
159 d1fzqa_ c.37.1.8 (A:) ADP-ribo 91.5 0.3 2.2E-05 22.8 6.7 23 985-1007 17-39 (176)
160 d1uaaa1 c.37.1.19 (A:2-307) DE 91.4 0.072 5.3E-06 26.9 3.2 23 985-1007 15-38 (306)
161 d1zd9a1 c.37.1.8 (A:18-181) AD 91.4 0.3 2.2E-05 22.7 8.9 23 986-1008 4-26 (164)
162 d1q0ua_ c.37.1.19 (A:) Probabl 91.3 0.26 1.9E-05 23.2 6.0 16 985-1000 39-54 (209)
163 d1ewqa2 c.37.1.12 (A:542-765) 91.3 0.31 2.2E-05 22.7 9.7 67 986-1054 37-125 (224)
164 d1oxxk2 c.37.1.12 (K:1-242) Gl 91.2 0.31 2.3E-05 22.6 9.3 26 983-1008 30-55 (242)
165 d1ko7a2 c.91.1.2 (A:130-298) H 91.2 0.11 7.7E-06 25.8 3.9 31 983-1014 14-44 (169)
166 d1e9ra_ c.37.1.11 (A:) Bacteri 91.1 0.16 1.1E-05 24.7 4.7 74 1043-1134 276-359 (433)
167 d1knxa2 c.91.1.2 (A:133-309) H 91.0 0.089 6.4E-06 26.3 3.4 34 983-1017 14-47 (177)
168 d3dhwc1 c.37.1.12 (C:1-240) Me 90.9 0.33 2.4E-05 22.4 8.2 25 985-1009 32-56 (240)
169 d1r8sa_ c.37.1.8 (A:) ADP-ribo 90.8 0.34 2.5E-05 22.4 8.9 23 986-1008 2-24 (160)
170 d1yrba1 c.37.1.10 (A:1-244) AT 90.8 0.18 1.3E-05 24.2 4.8 30 987-1016 3-34 (244)
171 d1odfa_ c.37.1.6 (A:) Hypothet 90.7 0.34 2.5E-05 22.3 7.2 36 985-1020 28-69 (286)
172 d1uf9a_ c.37.1.1 (A:) Dephosph 90.5 0.18 1.3E-05 24.2 4.6 30 985-1015 4-33 (191)
173 d1wmsa_ c.37.1.8 (A:) Rab9a {H 90.5 0.27 1.9E-05 23.1 5.4 22 986-1007 8-29 (174)
174 d1nn5a_ c.37.1.1 (A:) Thymidyl 90.4 0.29 2.1E-05 22.9 5.6 33 986-1018 5-40 (209)
175 d2fn4a1 c.37.1.8 (A:24-196) r- 90.3 0.37 2.7E-05 22.1 6.0 23 986-1008 8-30 (173)
176 d1kgda_ c.37.1.1 (A:) Guanylat 90.2 0.18 1.3E-05 24.3 4.3 28 985-1012 4-31 (178)
177 d1azta2 c.37.1.8 (A:35-65,A:20 90.2 0.39 2.8E-05 22.0 6.4 35 985-1019 7-46 (221)
178 d1vpla_ c.37.1.12 (A:) Putativ 90.1 0.39 2.8E-05 22.0 8.0 29 983-1011 27-55 (238)
179 d1s96a_ c.37.1.1 (A:) Guanylat 90.0 0.12 8.7E-06 25.4 3.3 25 985-1009 3-27 (205)
180 d2i1qa2 c.37.1.11 (A:65-322) D 89.8 0.14 1E-05 25.0 3.5 26 983-1008 33-58 (258)
181 d2p6ra3 c.37.1.19 (A:1-202) He 89.7 0.42 3.1E-05 21.8 10.2 31 985-1015 41-74 (202)
182 d1ji0a_ c.37.1.12 (A:) Branche 89.6 0.42 3.1E-05 21.8 7.3 60 984-1056 32-93 (240)
183 d1e0sa_ c.37.1.8 (A:) ADP-ribo 89.6 0.17 1.3E-05 24.4 3.9 23 985-1007 13-35 (173)
184 d1gsia_ c.37.1.1 (A:) Thymidyl 89.6 0.31 2.3E-05 22.6 5.2 32 987-1018 3-37 (208)
185 d1l8qa2 c.37.1.20 (A:77-289) C 89.2 0.31 2.2E-05 22.7 4.9 60 448-521 4-63 (213)
186 d2bmfa2 c.37.1.14 (A:178-482) 89.2 0.19 1.4E-05 24.0 3.9 15 985-999 10-24 (305)
187 d1ihua1 c.37.1.10 (A:1-296) Ar 89.2 0.45 3.3E-05 21.6 5.7 35 983-1017 7-44 (296)
188 d1tmka_ c.37.1.1 (A:) Thymidyl 88.6 0.39 2.9E-05 22.0 5.1 34 985-1018 4-37 (214)
189 d2qm8a1 c.37.1.10 (A:5-327) Me 88.5 0.51 3.7E-05 21.2 6.9 35 985-1019 52-91 (323)
190 d2vp4a1 c.37.1.1 (A:12-208) De 88.0 0.16 1.1E-05 24.6 2.7 31 983-1013 8-38 (197)
191 d2ocpa1 c.37.1.1 (A:37-277) De 88.0 0.34 2.5E-05 22.4 4.4 30 984-1013 2-31 (241)
192 d1kaoa_ c.37.1.8 (A:) Rap2a {H 87.9 0.55 4E-05 21.0 7.4 22 986-1007 5-26 (167)
193 d1vhta_ c.37.1.1 (A:) Dephosph 87.9 0.18 1.3E-05 24.2 3.1 29 987-1016 6-34 (208)
194 d1jjva_ c.37.1.1 (A:) Dephosph 87.5 0.17 1.2E-05 24.5 2.7 29 987-1016 5-33 (205)
195 d2gjsa1 c.37.1.8 (A:91-258) Ra 87.5 0.58 4.2E-05 20.8 6.0 22 986-1007 3-24 (168)
196 d1iqpa2 c.37.1.20 (A:2-232) Re 87.1 0.35 2.6E-05 22.3 4.1 73 703-822 108-180 (231)
197 d2p67a1 c.37.1.10 (A:1-327) LA 87.0 0.62 4.5E-05 20.6 9.9 36 984-1019 54-94 (327)
198 d1xpua3 c.37.1.11 (A:129-417) 86.9 0.63 4.6E-05 20.6 7.9 24 985-1008 44-67 (289)
199 d1zcba2 c.37.1.8 (A:47-75,A:20 86.4 0.56 4E-05 20.9 4.8 34 986-1019 4-43 (200)
200 d1u8za_ c.37.1.8 (A:) Ras-rela 86.0 0.69 5.1E-05 20.3 9.5 25 983-1007 3-27 (168)
201 d4tmka_ c.37.1.1 (A:) Thymidyl 85.9 0.29 2.1E-05 22.9 3.2 23 986-1008 4-26 (210)
202 d1qhxa_ c.37.1.3 (A:) Chloramp 85.7 0.41 3E-05 21.9 3.8 35 492-528 3-37 (178)
203 d1xzpa2 c.37.1.8 (A:212-371) T 85.6 0.73 5.3E-05 20.2 6.8 23 986-1008 2-24 (160)
204 d2erya1 c.37.1.8 (A:10-180) r- 85.6 0.73 5.3E-05 20.2 6.7 22 986-1007 7-28 (171)
205 d2a5ja1 c.37.1.8 (A:9-181) Rab 85.4 0.32 2.3E-05 22.6 3.2 22 986-1007 5-26 (173)
206 d1deka_ c.37.1.1 (A:) Deoxynuc 85.3 0.29 2.1E-05 22.8 3.0 31 986-1018 3-33 (241)
207 d1i2ma_ c.37.1.8 (A:) Ran {Hum 85.0 0.65 4.7E-05 20.5 4.6 22 986-1007 5-26 (170)
208 d1g6ha_ c.37.1.12 (A:) MJ1267 84.8 0.79 5.7E-05 19.9 8.5 25 985-1009 31-55 (254)
209 d2onka1 c.37.1.12 (A:1-240) Mo 84.8 0.33 2.4E-05 22.5 3.0 33 987-1019 27-61 (240)
210 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 84.7 0.32 2.4E-05 22.5 3.0 23 984-1006 13-35 (186)
211 d1gm5a3 c.37.1.19 (A:286-549) 84.7 0.8 5.8E-05 19.9 10.8 36 984-1019 104-142 (264)
212 d2f7sa1 c.37.1.8 (A:5-190) Rab 84.6 0.81 5.9E-05 19.9 10.2 22 986-1007 7-28 (186)
213 d2qtvb1 c.37.1.8 (B:24-189) SA 84.4 0.38 2.8E-05 22.1 3.2 22 986-1007 2-23 (166)
214 d1sgwa_ c.37.1.12 (A:) Putativ 83.9 0.86 6.3E-05 19.7 11.5 28 983-1010 26-53 (200)
215 d1upta_ c.37.1.8 (A:) ADP-ribo 83.9 0.41 3E-05 21.8 3.2 24 985-1008 6-29 (169)
216 d1a7ja_ c.37.1.6 (A:) Phosphor 83.8 0.38 2.8E-05 22.1 3.0 35 986-1020 6-43 (288)
217 d2j0sa1 c.37.1.19 (A:22-243) P 83.6 0.88 6.4E-05 19.6 9.4 52 945-999 16-69 (222)
218 d1z0fa1 c.37.1.8 (A:8-173) Rab 83.5 0.43 3.1E-05 21.7 3.2 22 986-1007 6-27 (166)
219 d1s2ma1 c.37.1.19 (A:46-251) P 83.5 0.89 6.5E-05 19.6 9.0 16 985-1000 39-54 (206)
220 d1wp9a1 c.37.1.19 (A:1-200) pu 83.5 0.89 6.5E-05 19.6 10.4 33 985-1017 24-60 (200)
221 d1qdea_ c.37.1.19 (A:) Initiat 83.4 0.9 6.6E-05 19.5 11.4 56 943-1001 7-64 (212)
222 d1sxjd2 c.37.1.20 (D:26-262) R 83.1 0.66 4.8E-05 20.5 4.0 70 704-820 108-177 (237)
223 d3raba_ c.37.1.8 (A:) Rab3a {R 82.6 0.49 3.6E-05 21.3 3.2 22 986-1007 7-28 (169)
224 d1z2aa1 c.37.1.8 (A:8-171) Rab 82.6 0.49 3.6E-05 21.3 3.2 22 986-1007 4-25 (164)
225 d1b0ua_ c.37.1.12 (A:) ATP-bin 82.5 0.47 3.5E-05 21.4 3.1 27 983-1009 27-53 (258)
226 d1rkba_ c.37.1.1 (A:) Adenylat 82.5 0.34 2.5E-05 22.4 2.3 33 492-526 4-36 (173)
227 d2f9la1 c.37.1.8 (A:8-182) Rab 82.3 0.52 3.8E-05 21.1 3.2 22 986-1007 6-27 (175)
228 d1veca_ c.37.1.19 (A:) DEAD bo 82.2 0.99 7.2E-05 19.2 12.5 15 985-999 41-55 (206)
229 d1r2qa_ c.37.1.8 (A:) Rab5a {H 82.1 0.53 3.9E-05 21.1 3.2 23 986-1008 8-30 (170)
230 d2atva1 c.37.1.8 (A:5-172) Ras 81.9 0.54 3.9E-05 21.0 3.2 23 986-1008 4-26 (168)
231 d1zp6a1 c.37.1.25 (A:6-181) Hy 81.9 0.44 3.2E-05 21.6 2.7 33 494-528 6-38 (176)
232 d2ew1a1 c.37.1.8 (A:4-174) Rab 81.8 0.51 3.7E-05 21.2 3.0 22 986-1007 7-28 (171)
233 d1z08a1 c.37.1.8 (A:17-183) Ra 81.0 0.6 4.4E-05 20.7 3.1 22 986-1007 5-26 (167)
234 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 80.9 0.62 4.5E-05 20.6 3.2 22 986-1007 4-25 (184)
235 d2bv3a2 c.37.1.8 (A:7-282) Elo 80.7 1.1 8.2E-05 18.9 9.2 25 985-1009 7-31 (276)
236 d1byia_ c.37.1.10 (A:) Dethiob 80.5 1.1 8.3E-05 18.9 4.7 33 985-1017 2-38 (224)
237 d1ihua2 c.37.1.10 (A:308-586) 80.4 1.1 8.4E-05 18.8 5.0 33 986-1018 22-57 (279)
238 d1moza_ c.37.1.8 (A:) ADP-ribo 80.2 0.67 4.9E-05 20.4 3.2 24 983-1006 16-39 (182)
239 d1oywa2 c.37.1.19 (A:1-206) Re 79.9 1.2 8.6E-05 18.7 6.9 31 985-1015 41-71 (206)
240 d2g6ba1 c.37.1.8 (A:58-227) Ra 79.9 0.7 5.1E-05 20.3 3.2 22 986-1007 8-29 (170)
241 d1z06a1 c.37.1.8 (A:32-196) Ra 79.6 1.2 8.9E-05 18.6 9.1 22 986-1007 4-25 (165)
242 d1ky3a_ c.37.1.8 (A:) Rab-rela 79.5 0.73 5.3E-05 20.2 3.2 22 986-1007 4-25 (175)
243 d1x3sa1 c.37.1.8 (A:2-178) Rab 79.4 0.74 5.4E-05 20.1 3.2 23 985-1007 8-30 (177)
244 d1hv8a1 c.37.1.19 (A:3-210) Pu 79.3 1.2 9.1E-05 18.6 9.8 23 985-1007 43-65 (208)
245 d2bmea1 c.37.1.8 (A:6-179) Rab 79.3 0.7 5.1E-05 20.3 3.0 22 986-1007 7-28 (174)
246 d1g16a_ c.37.1.8 (A:) Rab-rela 79.2 0.7 5.1E-05 20.3 3.0 22 986-1007 4-25 (166)
247 d2iyva1 c.37.1.2 (A:2-166) Shi 79.2 0.52 3.8E-05 21.1 2.3 33 492-526 1-33 (165)
248 d2erxa1 c.37.1.8 (A:6-176) di- 79.0 0.61 4.4E-05 20.7 2.6 22 986-1007 4-25 (171)
249 d1xtqa1 c.37.1.8 (A:3-169) GTP 79.0 0.71 5.2E-05 20.2 3.0 23 985-1007 5-27 (167)
250 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 78.9 0.73 5.3E-05 20.2 3.0 24 985-1008 3-26 (177)
251 d1yzqa1 c.37.1.8 (A:14-177) Ra 78.7 0.74 5.4E-05 20.1 3.0 22 986-1007 2-23 (164)
252 d1p5zb_ c.37.1.1 (B:) Deoxycyt 78.6 0.25 1.8E-05 23.3 0.5 26 985-1010 3-28 (241)
253 d2bcgy1 c.37.1.8 (Y:3-196) GTP 78.4 0.77 5.6E-05 20.0 3.0 22 986-1007 8-29 (194)
254 d2b8ta1 c.37.1.24 (A:11-149) T 78.4 1.3 9.6E-05 18.4 8.4 68 987-1055 5-91 (139)
255 d1qvra3 c.37.1.20 (A:536-850) 78.3 0.96 7E-05 19.4 3.5 72 435-532 17-94 (315)
256 d1sxjb2 c.37.1.20 (B:7-230) Re 78.2 0.86 6.2E-05 19.7 3.2 71 704-821 101-171 (224)
257 d1mh1a_ c.37.1.8 (A:) Rac {Hum 78.1 0.86 6.2E-05 19.7 3.2 23 986-1008 7-29 (183)
258 g1f2t.1 c.37.1.12 (A:,B:) Rad5 78.1 0.84 6.1E-05 19.7 3.1 62 1036-1116 218-279 (292)
259 d1c1ya_ c.37.1.8 (A:) Rap1A {H 78.0 0.87 6.3E-05 19.6 3.2 23 986-1008 5-27 (167)
260 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 78.0 0.87 6.3E-05 19.6 3.2 22 986-1007 5-26 (170)
261 d1kaga_ c.37.1.2 (A:) Shikimat 77.8 0.57 4.1E-05 20.9 2.2 32 493-526 3-34 (169)
262 d1z0ja1 c.37.1.8 (A:2-168) Rab 77.8 0.88 6.4E-05 19.6 3.2 22 986-1007 6-27 (167)
263 d2cxxa1 c.37.1.8 (A:2-185) GTP 77.8 0.72 5.3E-05 20.2 2.7 22 986-1007 2-23 (184)
264 d1m7ba_ c.37.1.8 (A:) RhoE (RN 77.6 0.84 6.1E-05 19.8 3.0 22 986-1007 4-25 (179)
265 d1x1ra1 c.37.1.8 (A:10-178) Ra 77.5 0.91 6.6E-05 19.5 3.2 23 985-1007 5-27 (169)
266 d1svia_ c.37.1.8 (A:) Probable 77.4 0.84 6.1E-05 19.7 3.0 22 985-1006 24-45 (195)
267 d2g3ya1 c.37.1.8 (A:73-244) GT 77.1 0.88 6.4E-05 19.6 3.0 21 986-1006 5-25 (172)
268 d1cp2a_ c.37.1.10 (A:) Nitroge 76.6 1.5 0.00011 18.1 4.7 34 985-1018 2-38 (269)
269 d1p6xa_ c.37.1.1 (A:) Thymidin 76.4 0.59 4.3E-05 20.8 2.0 26 494-521 8-33 (333)
270 d2atxa1 c.37.1.8 (A:9-193) Rho 76.3 0.94 6.9E-05 19.4 3.0 23 986-1008 11-33 (185)
271 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 76.0 1.1 7.9E-05 19.0 3.2 35 494-528 216-250 (623)
272 d2ngra_ c.37.1.8 (A:) CDC42 {H 75.9 0.99 7.2E-05 19.2 3.0 23 986-1008 5-27 (191)
273 d1mkya1 c.37.1.8 (A:2-172) Pro 74.9 1.6 0.00012 17.8 9.9 22 986-1007 2-23 (171)
274 d1t6na_ c.37.1.19 (A:) Spliceo 74.3 1.7 0.00012 17.7 12.1 16 985-1000 39-54 (207)
275 d1w36b1 c.37.1.19 (B:1-485) Ex 74.2 1.3 9.5E-05 18.4 3.3 11 1045-1055 379-389 (485)
276 d2fu5c1 c.37.1.8 (C:3-175) Rab 74.2 0.6 4.4E-05 20.7 1.5 21 986-1006 8-28 (173)
277 d1viaa_ c.37.1.2 (A:) Shikimat 74.1 0.84 6.1E-05 19.7 2.3 33 493-527 1-33 (161)
278 d1u0la2 c.37.1.8 (A:69-293) Pr 73.5 0.94 6.8E-05 19.4 2.4 32 985-1016 96-127 (225)
279 g1xew.1 c.37.1.12 (X:,Y:) Smc 72.8 1 7.3E-05 19.2 2.4 20 495-516 29-48 (329)
280 g1ii8.1 c.37.1.12 (A:,B:) Rad5 70.3 1.4 0.00011 18.1 2.7 20 494-515 25-44 (369)
281 d1osna_ c.37.1.1 (A:) Thymidin 69.9 1 7.6E-05 19.1 2.0 25 986-1010 7-31 (331)
282 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 69.4 2.2 0.00016 17.0 6.1 34 986-1019 4-44 (200)
283 d1nija1 c.37.1.10 (A:2-223) Hy 69.3 2.2 0.00016 16.9 6.4 24 985-1008 4-27 (222)
284 d1egaa1 c.37.1.8 (A:4-182) GTP 68.6 1.7 0.00013 17.6 2.8 23 985-1007 6-28 (179)
285 d1l7vc_ c.37.1.12 (C:) ABC tra 68.4 1.3 9.4E-05 18.5 2.1 24 983-1006 24-47 (231)
286 d1svsa1 c.37.1.8 (A:32-60,A:18 68.1 2.3 0.00017 16.8 5.9 32 986-1017 4-39 (195)
287 d2eyqa3 c.37.1.19 (A:546-778) 67.5 2.4 0.00017 16.7 9.3 36 984-1019 76-114 (233)
288 d2bmja1 c.37.1.8 (A:66-240) Ce 67.5 2.2 0.00016 17.0 3.2 26 983-1008 4-29 (175)
289 d1z63a1 c.37.1.19 (A:432-661) 67.4 2.4 0.00017 16.7 8.6 71 985-1056 32-137 (230)
290 d1w1wa_ c.37.1.12 (A:) Smc hea 67.1 2.4 0.00017 16.7 3.3 22 495-518 28-49 (427)
291 d1kk8a2 c.37.1.9 (A:1-28,A:77- 67.1 2.4 0.00018 16.7 3.6 27 491-519 120-146 (789)
292 d1tq4a_ c.37.1.8 (A:) Interfer 66.7 2.4 0.00017 16.7 3.2 23 984-1006 56-78 (400)
293 d1udxa2 c.37.1.8 (A:157-336) O 66.7 1.5 0.00011 18.0 2.2 21 986-1006 3-23 (180)
294 d1mkya2 c.37.1.8 (A:173-358) P 66.6 2.2 0.00016 17.0 3.0 23 985-1007 9-31 (186)
295 d1t9ha2 c.37.1.8 (A:68-298) Pr 66.0 0.68 5E-05 20.3 0.4 32 985-1016 98-129 (231)
296 d1lkxa_ c.37.1.9 (A:) Myosin S 65.9 2.5 0.00019 16.5 5.0 26 491-518 85-110 (684)
297 d1e2ka_ c.37.1.1 (A:) Thymidin 65.5 1.3 9.6E-05 18.4 1.7 24 986-1009 6-29 (329)
298 d1lnza2 c.37.1.8 (A:158-342) O 64.8 1.7 0.00012 17.7 2.1 21 986-1006 3-23 (185)
299 d1m8pa3 c.37.1.15 (A:391-573) 64.5 0.96 7E-05 19.4 0.9 27 494-522 8-34 (183)
300 d1j3ba1 c.91.1.1 (A:212-529) P 63.8 1.4 0.0001 18.2 1.7 15 987-1001 17-31 (318)
301 d1x6va3 c.37.1.4 (A:34-228) Ad 63.6 0.81 5.9E-05 19.8 0.4 33 492-526 19-51 (195)
302 d2olra1 c.91.1.1 (A:228-540) P 63.6 1.8 0.00013 17.6 2.1 18 797-814 178-195 (313)
303 d1d0xa2 c.37.1.9 (A:2-33,A:80- 63.5 2.8 0.0002 16.2 5.0 26 491-518 124-149 (712)
304 d2afhe1 c.37.1.10 (E:1-289) Ni 63.1 2.9 0.00021 16.2 4.7 32 986-1017 4-38 (289)
305 d2mysa2 c.37.1.9 (A:4-33,A:80- 62.8 2.9 0.00021 16.1 4.8 26 491-518 122-147 (794)
306 d1br2a2 c.37.1.9 (A:80-789) My 61.2 3.1 0.00022 15.9 5.0 26 491-518 90-115 (710)
307 d1puia_ c.37.1.8 (A:) Probable 60.5 1.4 1E-04 18.3 1.1 22 985-1006 17-38 (188)
308 d1ii2a1 c.91.1.1 (A:201-523) P 59.0 2.3 0.00017 16.7 2.1 14 496-511 18-31 (323)
309 d2jdid3 c.37.1.11 (D:82-357) C 59.0 3.4 0.00024 15.7 10.9 24 985-1008 69-92 (276)
310 d1goja_ c.37.1.9 (A:) Kinesin 57.9 1.7 0.00012 17.8 1.1 22 1087-1108 297-319 (354)
311 d1bg2a_ c.37.1.9 (A:) Kinesin 57.3 1.3 9.6E-05 18.4 0.5 21 1088-1108 292-313 (323)
312 d1qhla_ c.37.1.12 (A:) Cell di 56.4 1.1 8.3E-05 18.9 0.1 23 987-1009 27-49 (222)
313 d1w7ja2 c.37.1.9 (A:63-792) My 55.3 3.8 0.00028 15.3 5.0 26 491-518 93-118 (730)
314 d1e69a_ c.37.1.12 (A:) Smc hea 55.1 2.3 0.00017 16.8 1.5 49 1040-1103 238-286 (308)
315 d1rifa_ c.37.1.23 (A:) DNA hel 53.7 4.1 0.0003 15.1 4.1 51 950-1017 111-165 (282)
316 d2jdia3 c.37.1.11 (A:95-379) C 52.6 4.2 0.00031 15.0 2.9 23 985-1007 69-91 (285)
317 d1ry6a_ c.37.1.9 (A:) Kinesin 52.5 2.4 0.00018 16.7 1.2 11 1088-1098 300-310 (330)
318 d1sdma_ c.37.1.9 (A:) Kinesin 50.4 4.6 0.00033 14.8 2.6 22 1087-1108 290-312 (364)
319 d1dm9a_ d.66.1.3 (A:) Heat sho 48.9 4.8 0.00035 14.6 3.0 31 196-228 28-58 (104)
320 d1x88a1 c.37.1.9 (A:18-362) Ki 46.3 3 0.00022 16.1 0.9 24 1087-1110 310-335 (345)
321 d1v8ka_ c.37.1.9 (A:) Kinesin 45.8 2.4 0.00018 16.6 0.4 17 729-745 108-124 (362)
322 d2c78a3 c.37.1.8 (A:9-212) Elo 45.4 5.4 0.0004 14.3 6.7 27 982-1008 1-27 (204)
323 d1z3ix2 c.37.1.19 (X:92-389) R 42.4 6 0.00044 14.0 8.6 44 984-1027 79-132 (298)
324 d2ncda_ c.37.1.9 (A:) Kinesin 40.4 6.5 0.00047 13.8 2.6 17 985-1001 126-142 (368)
325 d1ni3a1 c.37.1.8 (A:11-306) Yc 40.0 6.6 0.00048 13.7 2.5 32 986-1017 12-48 (296)
326 d1hyqa_ c.37.1.10 (A:) Cell di 38.2 7 0.00051 13.5 5.0 30 988-1017 6-38 (232)
327 d1wrba1 c.37.1.19 (A:164-401) 37.1 7.2 0.00053 13.4 9.4 22 985-1006 59-82 (238)
328 d1xbta1 c.37.1.24 (A:18-150) T 37.1 7.3 0.00053 13.4 6.9 66 987-1055 5-85 (133)
329 d1jala1 c.37.1.8 (A:1-278) Ych 34.5 8 0.00058 13.2 1.8 18 987-1004 5-22 (278)
330 d1f9va_ c.37.1.9 (A:) Kinesin 34.1 8.1 0.00059 13.1 5.1 16 986-1001 85-100 (342)
331 d1c06a_ d.66.1.2 (A:) Ribosoma 33.9 7.5 0.00054 13.3 1.4 26 198-224 76-101 (159)
332 d1wb1a4 c.37.1.8 (A:1-179) Elo 33.1 8.4 0.00061 13.0 6.4 21 986-1006 7-27 (179)
333 d1xx6a1 c.37.1.24 (A:2-142) Th 32.5 8.6 0.00062 12.9 8.2 67 987-1055 10-92 (141)
334 d2dy1a2 c.37.1.8 (A:8-274) Elo 31.8 8.8 0.00064 12.9 16.2 25 985-1009 3-27 (267)
335 d1vioa2 d.66.1.5 (A:0-57) Pseu 31.1 9 0.00066 12.8 2.7 26 197-223 25-50 (58)
336 d2zfia1 c.37.1.9 (A:4-352) Kin 25.9 11 0.0008 12.2 2.5 16 730-745 82-97 (349)
337 d1g3qa_ c.37.1.10 (A:) Cell di 25.7 11 0.00081 12.2 7.0 31 987-1017 5-39 (237)
338 d1n0ua2 c.37.1.8 (A:3-343) Elo 25.0 11 0.00084 12.1 3.1 23 495-519 20-42 (341)
339 d1c9ka_ c.37.1.11 (A:) Adenosy 23.4 12 0.00089 11.9 2.3 32 987-1019 2-33 (180)
340 d1v8ca1 d.15.3.1 (A:1-87) MoaD 22.6 13 0.00093 11.8 2.7 28 199-226 54-83 (87)
341 d1t5la1 c.37.1.19 (A:2-414) Nu 21.8 13 0.00096 11.7 16.2 56 947-1017 9-64 (413)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.1e-44 Score=313.31 Aligned_cols=247 Identities=38% Similarity=0.590 Sum_probs=220.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 99998888411248399999999998740378255521788889932999958977499999999999199399995652
Q 000858 940 PPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1251)
Q Consensus 940 p~~e~~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~ 1019 (1251)
...++.++|+|++|+++++++|.+.+.+ +.+++.|.+.+.. +++++||+||||||||++|+++|++++.+++.++++.
T Consensus 3 ~~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~-~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~ 80 (256)
T d1lv7a_ 3 TEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGK-IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSD 80 (256)
T ss_dssp EECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----C-CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCS
T ss_pred CCCCCCCCHHHHHCHHHHHHHHHHHHHH-HHCHHHHHHCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEHHH
T ss_conf 8889998999981639999999999999-8799999986999-8886786689988822899999998299879988699
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC--HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 11001474089999999998830991599844200014789985--2799999998677640688556886489999438
Q 000858 1020 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1251)
Q Consensus 1020 L~s~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~--~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN 1097 (1251)
+.+.|+|++++.++.+|..|+.++||||||||+|.+++.+.... ......+++++|+..++++... .+++||||||
T Consensus 81 l~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~--~~v~vIatTn 158 (256)
T d1lv7a_ 81 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN--EGIIVIAATN 158 (256)
T ss_dssp STTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSS--SCEEEEEEES
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--CCEEEEEECC
T ss_conf 42600107899999999999975998999977566575678988887489999999999995387777--9989998079
Q ss_pred CCCCCCHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98887399982--0354424789997899999999995222688021999999838995999999999998541699998
Q 000858 1098 RPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILE 1175 (1251)
Q Consensus 1098 ~pe~Ld~aLlr--RF~~~I~I~lPd~eeR~eILk~ll~k~~l~~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airrile 1175 (1251)
.++.+|++++| ||++.++|++|+.++|.+||+.++++..+..++++..++..|+||+++||.++|+.|+..++++
T Consensus 159 ~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~--- 235 (256)
T d1lv7a_ 159 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARG--- 235 (256)
T ss_dssp CTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHT---
T ss_pred CCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC---
T ss_conf 93107985768987877987799599999999998425998686569999998689989999999999999999982---
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 98999999985115999998866554453999999999815
Q 000858 1176 KEKKERALALAENRASPPLYSSVDVRPLKMDDFKYAHEQVC 1216 (1251)
Q Consensus 1176 ~~~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~kv~ 1216 (1251)
..+.++++||++|++++.
T Consensus 236 -----------------------~~~~i~~~d~~~Al~rv~ 253 (256)
T d1lv7a_ 236 -----------------------NKRVVSMVEFEKAKDKIM 253 (256)
T ss_dssp -----------------------TCSSBCHHHHHHHHHHHT
T ss_pred -----------------------CCCCCCHHHHHHHHHHHH
T ss_conf -----------------------898348999999999996
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.9e-43 Score=305.71 Aligned_cols=240 Identities=38% Similarity=0.589 Sum_probs=215.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 98888411248399999999998740378255521788889932999958977499999999999199399995652110
Q 000858 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1022 (1251)
Q Consensus 943 e~~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s 1022 (1251)
.+.++|+||+|++++++.|++.+.. +.+++.|.+.+. .+++|+||+||||||||++|+++|++++.+++.++++.+.+
T Consensus 3 ~p~~~~~di~G~~~~k~~l~~~i~~-l~~~~~~~~~g~-~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 3 APKVTFKDVAGAEEAKEELKEIVEF-LKNPSRFHEMGA-RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 80 (247)
T ss_dssp CCSCCGGGCCSCHHHHHHHHHHHHH-HHCHHHHHHTTC-CCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred CCCCCHHHHCCHHHHHHHHHHHHHH-HHCHHHHHHCCC-CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf 8997499971579999999999999-879999997599-98864887668988835999999987399779978699646
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC--HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 01474089999999998830991599844200014789985--2799999998677640688556886489999438988
Q 000858 1023 KWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPF 1100 (1251)
Q Consensus 1023 ~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~--~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe 1100 (1251)
.|+|++++.++.+|..|+.++|+||||||+|.+++.+.... ......+++++|+..++++.. +.+|+||+|||.++
T Consensus 81 ~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~vivi~tTn~~~ 158 (247)
T d1ixza_ 81 MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK--DTAIVVMAATNRPD 158 (247)
T ss_dssp SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT--TCCEEEEEEESCGG
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--CCCEEEEEECCCCC
T ss_conf 2453899999999999997699799997736647467899888758999999999999638777--89989998079940
Q ss_pred CCCHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87399982--0354424789997899999999995222688021999999838995999999999998541699998989
Q 000858 1101 DLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILEKEK 1178 (1251)
Q Consensus 1101 ~Ld~aLlr--RF~~~I~I~lPd~eeR~eILk~ll~k~~l~~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airrile~~~ 1178 (1251)
.+|++++| ||+++|+|+.|+.++|.+||+.++.+.....+.++..|+..|+||+++||.++|+.|+..++++
T Consensus 159 ~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~------ 232 (247)
T d1ixza_ 159 ILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAARE------ 232 (247)
T ss_dssp GSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHT------
T ss_pred CCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC------
T ss_conf 06996758987857999799699999999998750657765468999997788988999999999999999986------
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9999998511599999886655445399999999
Q 000858 1179 KERALALAENRASPPLYSSVDVRPLKMDDFKYAH 1212 (1251)
Q Consensus 1179 ~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al 1212 (1251)
....++++||+.|+
T Consensus 233 --------------------~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 233 --------------------GRRKITMKDLEEAA 246 (247)
T ss_dssp --------------------TCSSBCHHHHHHHT
T ss_pred --------------------CCCCCCHHHHHHHH
T ss_conf --------------------88874999999864
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=9.5e-44 Score=308.97 Aligned_cols=256 Identities=39% Similarity=0.632 Sum_probs=218.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf 88411248399999999998740378255521788889932999958977499999999999199399995652110014
Q 000858 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1251)
Q Consensus 946 vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~ 1025 (1251)
++|+||+|++.+|+.|++.+.+|+.+++.|.+.++. +++|+||+||||||||++++++|++++.+|+.++++.+.+.+.
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~ 79 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVK-PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLA 79 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCC-CCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCT
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCC-CCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECHHHCCCCC
T ss_conf 976663109999999999999883199999867999-8864687669988830899999987488379997304302545
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHH
Q ss_conf 74089999999998830991599844200014789985279999999867764068855688648999943898887399
Q 000858 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA 1105 (1251)
Q Consensus 1026 GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~a 1105 (1251)
|..+..++.+|..|++.+|+||||||+|.+++++... ..+..++++..++..+++... +.+|+||+|||.++.+|++
T Consensus 80 g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~-~~~~~~~~~~~~~~~~~~~~~--~~~vlvi~tTn~~~~ld~a 156 (258)
T d1e32a2 80 GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGLKQ--RAHVIVMAATNRPNSIDPA 156 (258)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHC-CCTTHHHHHHHHHHHHHTCCC--SSCEEEEEEESCGGGSCGG
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCC-CCCHHHHHHHHHCCCCCCCCC--CCCCCEEEECCCCCCCCHH
T ss_conf 6178888999999986499499852111322578877-770689998775001101234--6881179757993102524
Q ss_pred HHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 982--035442478999789999999999522268802199999983899599999999999854169999898999999
Q 000858 1106 VVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILEKEKKERAL 1183 (1251)
Q Consensus 1106 Llr--RF~~~I~I~lPd~eeR~eILk~ll~k~~l~~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airrile~~~~ek~~ 1183 (1251)
++| ||+++|+|++|+.++|..||+.++++..+..+.++..|+..|+||+++||.++|++|+..++++.......
T Consensus 157 l~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~---- 232 (258)
T d1e32a2 157 LRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL---- 232 (258)
T ss_dssp GTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred HHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH----
T ss_conf 5424630232378999988999873220457633455303444420667789999999999999999850433452----
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9851159999988665544539999999998
Q 000858 1184 ALAENRASPPLYSSVDVRPLKMDDFKYAHEQ 1214 (1251)
Q Consensus 1184 a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~k 1214 (1251)
..........+..+++|+||+.|+.+
T Consensus 233 -----~~~~~~~~~~~~~~it~~Df~~AL~~ 258 (258)
T d1e32a2 233 -----EDETIDAEVMNSLAVTMDDFRWALSQ 258 (258)
T ss_dssp -----CSSCCBHHHHHHCCBCHHHHHHHHTC
T ss_pred -----HHHHHHHHHHCCCCCCHHHHHHHHCC
T ss_conf -----25442156514686689999999676
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=3.9e-41 Score=291.35 Aligned_cols=257 Identities=40% Similarity=0.662 Sum_probs=220.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919939999565211001
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW 1024 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~ 1024 (1251)
.++|+||+|+++++++|.+.+.+|+.+++.|.+.++. +++|+||+||||||||++|+++|.+++.+|+.++++.+.+.+
T Consensus 3 ~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~ 81 (265)
T d1r7ra3 3 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 81 (265)
T ss_dssp CCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCC-CCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSC
T ss_pred CCCHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCC-CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHCC
T ss_conf 9989996678999999999999996399999867999-887578878998763047788787718947998879952531
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 4740899999999988309915998442000147899--85279999999867764068855688648999943898887
Q 000858 1025 FGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN--PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDL 1102 (1251)
Q Consensus 1025 ~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~--~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~L 1102 (1251)
.|..+..++.+|..|+.++||||||||+|.++..+.. ........++++.|+..++++..+ .+++||||||.++.|
T Consensus 82 ~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~--~~v~vi~ttn~~~~l 159 (265)
T d1r7ra3 82 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDII 159 (265)
T ss_dssp TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------CCEEEECCBSCTTT
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--CCEEEEEECCCCHHC
T ss_conf 651589999999999863984356875463245578767887379999999999996286777--998999917992227
Q ss_pred CHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 399982--035442478999789999999999522268802199999983899599999999999854169999898999
Q 000858 1103 DEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILEKEKKE 1180 (1251)
Q Consensus 1103 d~aLlr--RF~~~I~I~lPd~eeR~eILk~ll~k~~l~~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airrile~~~~e 1180 (1251)
|++++| ||+++|.++.|+.++|.+||+.++++.....++++..|+.+|+||+++||.++|+.|...++++.++..-.+
T Consensus 160 d~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~~~~~~~~ 239 (265)
T d1r7ra3 160 DPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRR 239 (265)
T ss_dssp SCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC-------
T ss_pred CHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99780787764799956607888999999996057710243689998258999999999999999999999899989999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999851159999988665544539999999998
Q 000858 1181 RALALAENRASPPLYSSVDVRPLKMDDFKYAHEQ 1214 (1251)
Q Consensus 1181 k~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~k 1214 (1251)
..... .......++.+||..++.+
T Consensus 240 ~~~~~----------~~~~~~~~~~~d~v~~i~~ 263 (265)
T d1r7ra3 240 ERERQ----------TNPSAMEVEEDDPVPEIRR 263 (265)
T ss_dssp ---------------------------CHHHHHH
T ss_pred HHHHC----------CCCCCCCCCCCCCHHHHCC
T ss_conf 99862----------3840154553666287726
No 5
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.94 E-value=4.6e-27 Score=196.62 Aligned_cols=168 Identities=23% Similarity=0.298 Sum_probs=132.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf 889932999958977499999999999199399995652110014740-8999999999883099159984420001478
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEG-EKYVKAVFSLASKIAPSVVFVDEVDSMLGRR 1059 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~Ges-Ek~Ir~iF~~A~k~~PsIIfIDEID~L~~~r 1059 (1251)
..|++++||+||||||||++|++||++++++|+.++++++...+.+.. .+.++++|..|++.+|+||||||||.+++.+
T Consensus 37 ~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~ 116 (246)
T d1d2na_ 37 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV 116 (246)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCB
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHC
T ss_conf 89980799889699988999999862010023334565223565421122444445655553242223310256676513
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHH-HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9985279999999867764068855688648999943898887399-982035442478999789999999999522268
Q 000858 1060 ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA-VVRRLPRRLMVNLPDAPNREKIIRVILAKEELA 1138 (1251)
Q Consensus 1060 ~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~a-LlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~ 1138 (1251)
.... ...+.+++.++..+++.... ..+|+||+|||.++.+++. +.+||+..|++ |+..+|.+|++.+... ...
T Consensus 117 ~~~~--~~~~~~~~~ll~~l~~~~~~-~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~--P~~~~r~~il~~l~~~-~~~ 190 (246)
T d1d2na_ 117 PIGP--RFSNLVLQALLVLLKKAPPQ-GRKLLIIGTTSRKDVLQEMEMLNAFSTTIHV--PNIATGEQLLEALELL-GNF 190 (246)
T ss_dssp TTTT--BCCHHHHHHHHHHTTCCCST-TCEEEEEEEESCHHHHHHTTCTTTSSEEEEC--CCEEEHHHHHHHHHHH-TCS
T ss_pred CCCC--CHHHHHHHHHHHHHCCCCCC-CCCEEEEECCCCHHHCCCHHHCCCCCEEEEC--CCCHHHHHHHHHHHHC-CCC
T ss_conf 4544--12478999999986077765-4501455324883225610201866338855--9910599999999742-689
Q ss_pred CHHCHHHHHHHCCCCC
Q ss_conf 8021999999838995
Q 000858 1139 SDVDLEGIANMADGYS 1154 (1251)
Q Consensus 1139 ~dvdl~~LA~~T~Gys 1154 (1251)
.+.++..++..+.|..
T Consensus 191 ~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 191 KDKERTTIAQQVKGKK 206 (246)
T ss_dssp CHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHHCCCCC
T ss_conf 8688999999748995
No 6
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.93 E-value=5.1e-26 Score=189.59 Aligned_cols=182 Identities=24% Similarity=0.319 Sum_probs=148.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC--CCCCCC
Q ss_conf 124839999999999874037825552178888993299995897749999999999919939999565211--001474
Q 000858 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT--SKWFGE 1027 (1251)
Q Consensus 950 dI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~--s~~~Ge 1027 (1251)
.++|++++++.+.+++..++.+..+........|+.++||+||||||||+||+++|+.++.+|+.++++++. +.+.|.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEE
T ss_conf 13491999999999999898772457877667898669998999988889999986213221000344330101157641
Q ss_pred HHHHHHHHHHHHHH-----CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------CCCEEEEEE-
Q ss_conf 08999999999883-----099159984420001478998527999999986776406885568------864899994-
Q 000858 1028 GEKYVKAVFSLASK-----IAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD------KERVLVLAA- 1095 (1251)
Q Consensus 1028 sEk~Ir~iF~~A~k-----~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~------~~~VlVIaT- 1095 (1251)
.++.++.+|..|.. .+||||||||||.+.+.+.....+.....+++.|+..+++..... ..++++|++
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~g 174 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASG 174 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEE
T ss_pred CCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEECCCEEEEECC
T ss_conf 13333332123312320035785688424645403015764120125799875288619888558807974622687046
Q ss_pred ---CCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf ---389888739998203544247899978999999999
Q 000858 1096 ---TNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVI 1131 (1251)
Q Consensus 1096 ---TN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~l 1131 (1251)
++.+..++++++.||+.++.++.|+..++.+|++.+
T Consensus 175 a~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~~ 213 (309)
T d1ofha_ 175 AFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEP 213 (309)
T ss_dssp CCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHSS
T ss_pred CHHHCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHH
T ss_conf 122147200125443102003002578879999999888
No 7
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.91 E-value=8e-27 Score=194.98 Aligned_cols=161 Identities=14% Similarity=0.178 Sum_probs=131.7
Q ss_pred CCCHHHHHCCCCCCCCCEE-EEECCCCCHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 3782555217888899329-9995897749999999999919--939999565211001474089999999998830991
Q 000858 969 LQRPELFCKGQLTKPCKGI-LLFGPPGTGKTMLAKAVATEAG--ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPS 1045 (1251)
Q Consensus 969 l~rpelf~k~~i~kP~~gI-LL~GPpGTGKT~LAkAIA~elg--~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~~Ps 1045 (1251)
...|..+...+.. +++|+ ||+||||||||++|+++|.+++ .+|+.+++++++++|.|++++.++.+|..|+. |+
T Consensus 108 ~~~~~~~~~~~~~-~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~ 184 (321)
T d1w44a_ 108 GCSPVVAEFGGHR-YASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HR 184 (321)
T ss_dssp SBCCEEEEETTEE-EESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CS
T ss_pred CCCHHHHHHHHCC-CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHH--CC
T ss_conf 4461889886143-68863888779985088999999998637998089782685442444578999999999862--65
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC----CHHHHH--CCCCCCCCCCC
Q ss_conf 599844200014789985279999999867764068855688648999943898887----399982--03544247899
Q 000858 1046 VVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDL----DEAVVR--RLPRRLMVNLP 1119 (1251)
Q Consensus 1046 IIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~L----d~aLlr--RF~~~I~I~lP 1119 (1251)
||||||||.+.+.+..........+++++++..++++... .+|+|||+||+ +.+ ++++.| ||++.+.++.|
T Consensus 185 ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~--~~v~viaatN~-~~~~~~i~~~~~r~~Rf~~~v~v~~p 261 (321)
T d1w44a_ 185 VIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAAS--RGCVVIASLNP-TSNDDKIVELVKEASRSNSTSLVIST 261 (321)
T ss_dssp EEEEECCTTTC-----------CCHHHHHHHHHHHHHHHH--HTCEEEEECCC-CCCCHHHHHHHHHHHHHSCSEEEEEC
T ss_pred EEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCEEEEEECCC-CCCCCCHHHHHHCCCCCCCEEECCCC
T ss_conf 8974101222123456789874133451566520355667--88499983797-63531010233365755542115898
Q ss_pred CHHHHHHHHHHHHHHC
Q ss_conf 9789999999999522
Q 000858 1120 DAPNREKIIRVILAKE 1135 (1251)
Q Consensus 1120 d~eeR~eILk~ll~k~ 1135 (1251)
+.+.|.+|++.+....
T Consensus 262 d~~~r~~il~~~~~~~ 277 (321)
T d1w44a_ 262 DVDGEWQVLTRTGEGL 277 (321)
T ss_dssp SSTTEEEEEEECBTTC
T ss_pred CHHHHHHHHHHHCCCC
T ss_conf 8678999999862584
No 8
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.88 E-value=1.6e-20 Score=152.51 Aligned_cols=221 Identities=21% Similarity=0.218 Sum_probs=156.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf 88411248399999999998740378255521788889932999958977499999999999199399995652110014
Q 000858 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1251)
Q Consensus 946 vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~ 1025 (1251)
.+|+|++|++.+++.|..++..+.. + ..+.+++||+||||||||++|+++|++++++++.++......
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~------~---~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~--- 73 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKM------R---GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK--- 73 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHH------H---TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS---
T ss_pred CCHHHCCCHHHHHHHHHHHHHHHHH------C---CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC---
T ss_conf 9299908959999999999997885------3---887774898799997388999999850388853325744224---
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCC------CCCCCCCEEEEEECCC
Q ss_conf 740899999999988309915998442000147899852799999998677640-688------5568864899994389
Q 000858 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNW-DGL------RTKDKERVLVLAATNR 1098 (1251)
Q Consensus 1026 GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~l-dgl------~~k~~~~VlVIaTTN~ 1098 (1251)
...+..++.. ....+++||||+|.+. ...+......+....... .+. ......++++|++||.
T Consensus 74 ---~~~~~~~~~~--~~~~~~~~ide~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~ 143 (238)
T d1in4a2 74 ---QGDMAAILTS--LERGDVLFIDEIHRLN-----KAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTR 143 (238)
T ss_dssp ---HHHHHHHHHH--CCTTCEEEEETGGGCC-----HHHHHHHHHHHHTSCCCC---------------CCCEEEEEESC
T ss_pred ---HHHHHHHHHH--HCCCCCHHHHHHHHHH-----HHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCC
T ss_conf ---8889999875--4358824777898840-----67776421402441454454376002444457887699995478
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8887399982035442478999789999999999522268-802199999983899599999999999854169999898
Q 000858 1099 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILEKE 1177 (1251)
Q Consensus 1099 pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airrile~~ 1177 (1251)
+..+++.+++||...+.++.|+.+++..+++.+...+... .+..+..++..+.| ..+.+.++++.+...+...
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~~~~----- 217 (238)
T d1in4a2 144 SGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLTVV----- 217 (238)
T ss_dssp GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHHHH-----
T ss_pred CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHH-----
T ss_conf 7555543113300799844787787777777765301100257999999996799-8999999999999999985-----
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999998511599999886655445399999999981
Q 000858 1178 KKERALALAENRASPPLYSSVDVRPLKMDDFKYAHEQV 1215 (1251)
Q Consensus 1178 ~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~kv 1215 (1251)
....++.++..++++.+
T Consensus 218 ---------------------~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 218 ---------------------KADRINTDIVLKTMEVL 234 (238)
T ss_dssp ---------------------TCSSBCHHHHHHHHHHH
T ss_pred ---------------------CCCCCCHHHHHHHHHHH
T ss_conf ---------------------69962899999998865
No 9
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2e-21 Score=158.70 Aligned_cols=106 Identities=25% Similarity=0.402 Sum_probs=98.2
Q ss_pred CCCEECCCCCCCCCEEEECCEEEECCCCCCCEEECCC---------CCCCCCEEEEEEE-CCCCCEEEEEEECCCCEEEE
Q ss_conf 6300012367897525644536870478521252499---------8875531899820-59965299998438744998
Q 000858 133 PWARLISQCSQNSHLSMTGAVFTVGHNRQCDLYLKDP---------SISKNLCRLRRIE-NGGPSGALLEITGGKGEVEV 202 (1251)
Q Consensus 133 pW~rL~s~~~~~p~~~i~~~~~t~G~~~~cd~~l~d~---------~~s~~~c~l~~~~-~~g~~~a~le~~~~~G~v~v 202 (1251)
|||||+++..++|++++.+..|+|||+..||+.|+++ .||..||+|.+.. .++..++++++.|+||| +|
T Consensus 1 PwgrL~~~~~~~~~~~L~~~~~~iGR~~~cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~d~S~NGT-~v 79 (116)
T d1gxca_ 1 PWARLWALQDGFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGT-FV 79 (116)
T ss_dssp CCEEEEECSTTCCCEEECSSEEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCE-EE
T ss_pred CEEEEEECCCCCCEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCCEEEEECCCCCCC-EE
T ss_conf 94999854899863885888789615777875844873234333433723149999942568987899978986574-69
Q ss_pred CCEECCCCCEEEEECCCEEEECCCCCEEEEEEECCCC
Q ss_conf 6955089863870079889981389714796404756
Q 000858 203 NGNVHPKDSQVVLRGGDELVFSPSGKHSYIFQQLSDD 239 (1251)
Q Consensus 203 Ng~~~~k~~~~~L~~gdev~f~~~~~~ayifq~l~~~ 239 (1251)
||+.+.|+..++|++||+|.|+....++|+|+|+..|
T Consensus 80 N~~~i~~~~~~~L~~gD~I~ig~~~~~~f~f~d~~~~ 116 (116)
T d1gxca_ 80 NTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVD 116 (116)
T ss_dssp TTEECCTTCEEECCTTEEEEESSTTCEEEEEEETTCC
T ss_pred CCEECCCCCEEECCCCCEEEECCCEEEEEEEEECCCC
T ss_conf 9989679977888999999989977489999972379
No 10
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.86 E-value=7e-21 Score=154.96 Aligned_cols=216 Identities=17% Similarity=0.257 Sum_probs=157.5
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 88754333334554430678999987422102455422224789988893120278981588999999998441871999
Q 000858 445 GPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1251)
Q Consensus 445 ~~~~~~vsfd~FPYylse~tk~~L~~~~~~hL~~~~~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~ 524 (1251)
.-..++|||++.--+ |++|..|.+... .+++++. |.+.-.+..+.|||.|||| ....+||||+|++.+.+++.
T Consensus 3 ~~~~~~~t~~Di~Gl--~~~k~~l~e~v~-~~~~~~~--~~~~g~~~~~~iLL~GppG--tGKT~la~~iA~~~~~~~~~ 75 (256)
T d1lv7a_ 3 TEDQIKTTFADVAGC--DEAKEEVAELVE-YLREPSR--FQKLGGKIPKGVLMVGPPG--TGKTLLAKAIAGEAKVPFFT 75 (256)
T ss_dssp EECSSCCCGGGSCSC--HHHHHHTHHHHH-HHHCGGG--C-----CCCCEEEEECCTT--SCHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCHHHHHCH--HHHHHHHHHHHH-HHHCHHH--HHHCCCCCCCEEEEECCCC--CCCCHHHHHHHHHCCCCEEE
T ss_conf 888999899998163--999999999999-9879999--9986999888678668998--88228999999982998799
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 84667899998652000020146666789999986512688973222345654345678999866623447644457980
Q 000858 525 VDSLLLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDR 604 (1251)
Q Consensus 525 lDs~~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdr 604 (1251)
++.+.+.+.+.
T Consensus 76 i~~~~l~~~~~--------------------------------------------------------------------- 86 (256)
T d1lv7a_ 76 ISGSDFVEMFV--------------------------------------------------------------------- 86 (256)
T ss_dssp ECSCSSTTSCC---------------------------------------------------------------------
T ss_pred EEHHHHHHCCH---------------------------------------------------------------------
T ss_conf 88699426001---------------------------------------------------------------------
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 12431578786458888999875455165202358887511210378986787898877888751024553446998604
Q 000858 605 VKFVGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDE 684 (1251)
Q Consensus 605 v~~~g~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~c~~~~~~~~~~~~~~~d~~~~~~ 684 (1251)
|.
T Consensus 87 ----g~-------------------------------------------------------------------------- 88 (256)
T d1lv7a_ 87 ----GV-------------------------------------------------------------------------- 88 (256)
T ss_dssp ----CC--------------------------------------------------------------------------
T ss_pred ----HH--------------------------------------------------------------------------
T ss_conf ----07--------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC-------C----HHHHHHHHHHHHCCCC--CEEEEEECCCCCCCC
Q ss_conf 67898999999986103789869997470334115-------9----3368999998713999--889996225788632
Q 000858 685 VDKLAINELFEVALNESKSSPLIVFVKDIEKSLTG-------N----NDAYGALKSKLENLPS--NVVVIGSHTQLDSRK 751 (1251)
Q Consensus 685 ~~k~~~~~l~evl~ses~~~P~Ilfi~Dve~~l~~-------~----~~~~~~l~~~L~~L~g--~VivIgs~~~~d~~k 751 (1251)
..-.++.+|+.+.. ..|.||||+|+|.++.. . .+..+.|...++.+.+ +|+|||+||
T Consensus 89 -~~~~l~~~f~~A~~---~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn------ 158 (256)
T d1lv7a_ 89 -GASRVRDMFEQAKK---AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN------ 158 (256)
T ss_dssp -CHHHHHHHHHHHHT---TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEES------
T ss_pred -HHHHHHHHHHHHHH---CCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC------
T ss_conf -89999999999997---59989999775665756789888874899999999999953877779989998079------
Q ss_pred CCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHHHHHHHH
Q ss_conf 248999750203576033220136899855223234562699989763179808853883467999--999998543344
Q 000858 752 EKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVET 829 (1251)
Q Consensus 752 ~k~~~~~~~~~~~~~~~~~l~d~~~pd~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferqle~~Lpd 829 (1251)
.|+.+|+ |++| ||+.++++++|+
T Consensus 159 ------------------------~~~~ld~-------------------------------al~R~gRfd~~i~i~~P~ 183 (256)
T d1lv7a_ 159 ------------------------RPDVLDP-------------------------------ALLRPGRFDRQVVVGLPD 183 (256)
T ss_dssp ------------------------CTTTSCG-------------------------------GGGSTTSSCEEEECCCCC
T ss_pred ------------------------CCCCCCH-------------------------------HHCCCCCCCEEEECCCCC
T ss_conf ------------------------9310798-------------------------------576898787798779959
Q ss_pred HHCCCCHHHHHHHHHHCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 3203203678877330899-851000022025788878899987346556763
Q 000858 830 LKGQSNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFM 881 (1251)
Q Consensus 830 ~~gR~~Il~IhT~l~~~~l-~~~dL~~La~~tkg~sgadIe~Lv~~A~s~Al~ 881 (1251)
.+.|..|++.+.. .-++ .++++..|+..|.||+++||+.+|+.|...++.
T Consensus 184 ~~~R~~il~~~l~--~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~ 234 (256)
T d1lv7a_ 184 VRGREQILKVHMR--RVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 234 (256)
T ss_dssp HHHHHHHHHHHHT--TSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC--CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999998425--99868656999999868998999999999999999998
No 11
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.85 E-value=2.8e-19 Score=144.13 Aligned_cols=223 Identities=20% Similarity=0.220 Sum_probs=151.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919939999565211001
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW 1024 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~ 1024 (1251)
..+|+|++|++++++.|..++.....+ ..+++++||+||||+|||++|+++|+++++++..++.+.....
T Consensus 5 P~~~ddivGq~~~~~~L~~~i~~~~~~---------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~- 74 (239)
T d1ixsb2 5 PKTLDEYIGQERLKQKLRVYLEAAKAR---------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP- 74 (239)
T ss_dssp CCSGGGSCSCHHHHHHHHHHHHHHTTS---------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH-
T ss_pred CCCHHHHCCHHHHHHHHHHHHHHHHHC---------CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCC-
T ss_conf 798889489899999999999978735---------8888738988979987888999999984987475468753432-
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH-HCCCCC------CCCCCCEEEEEECC
Q ss_conf 47408999999999883099159984420001478998527999999986776-406885------56886489999438
Q 000858 1025 FGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV-NWDGLR------TKDKERVLVLAATN 1097 (1251)
Q Consensus 1025 ~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~-~ldgl~------~k~~~~VlVIaTTN 1097 (1251)
+ ......... ....+|+||||+|.+. ...+......+..... ...+.. .....++.+|++|+
T Consensus 75 -~----~~~~~~~~~-~~~~~i~~iDe~~~~~-----~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 143 (239)
T d1ixsb2 75 -G----DLAAILANS-LEEGDILFIDEIHRLS-----RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATT 143 (239)
T ss_dssp -H----HHHHHHHTT-CCTTCEEEEETGGGCC-----HHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEES
T ss_pred -H----HHHHHHHHH-CCCCCEEEEECCCCCC-----HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECC
T ss_conf -1----468998851-0388734431100110-----4478750012433321211046556543346899779996306
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98887399982035442478999789999999999522268-80219999998389959999999999985416999989
Q 000858 1098 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILEK 1176 (1251)
Q Consensus 1098 ~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airrile~ 1176 (1251)
.+.......++++...+.+..|+.+++..++...+..+.+. .+..+..++..+.|. .+...++++.+...+.
T Consensus 144 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~gd-~R~a~~~l~~~~~~a~------ 216 (239)
T d1ixsb2 144 RPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGT-MRVAKRLFRRVRDFAQ------ 216 (239)
T ss_dssp CCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHT------
T ss_pred CCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHH------
T ss_conf 833344101012214567520574555578899999848765267899999976999-9999999999999989------
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 899999998511599999886655445399999999981
Q 000858 1177 EKKERALALAENRASPPLYSSVDVRPLKMDDFKYAHEQV 1215 (1251)
Q Consensus 1177 ~~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~kv 1215 (1251)
......++.++..+++..+
T Consensus 217 --------------------~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 217 --------------------VAGEEVITRERALEALAAL 235 (239)
T ss_dssp --------------------TSCCSCBCHHHHHHHHHHH
T ss_pred --------------------HHCCCCCCHHHHHHHHHHH
T ss_conf --------------------8579973899999998636
No 12
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=3.1e-22 Score=164.07 Aligned_cols=241 Identities=15% Similarity=0.218 Sum_probs=170.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 33334554430678999987422102455422-22478998889312027898158899999999844187199984667
Q 000858 451 VSFESFPYYLSDITKNVLIASTYVHLKCNNFA-KYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1251)
Q Consensus 451 vsfd~FPYylse~tk~~L~~~~~~hL~~~~~~-k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~ 529 (1251)
|+||+.--+ |.+|.-|.+.....|+++++. +++ -+..+.|||.|||| ....+||||+|++.+.+++.++.+.
T Consensus 1 ~~~~dv~G~--~~~k~~l~~~i~~~l~~~~~~~~~g---~~~~~giLL~GppG--tGKT~l~~ala~~~~~~~~~i~~~~ 73 (258)
T d1e32a2 1 VGYDDVGGC--RKQLAQIKEMVELPLRHPALFKAIG---VKPPRGILLYGPPG--TGKTLIARAVANETGAFFFLINGPE 73 (258)
T ss_dssp CCGGGCCSC--SHHHHHHHHHHHHHHHCHHHHHHCC---CCCCCEEEEECCTT--SSHHHHHHHHHHHTTCEEEEECHHH
T ss_pred CCHHHHCCH--HHHHHHHHHHHHHHHCCHHHHHHCC---CCCCCEEEEECCCC--CCCHHHHHHHHHHHCCEEEEEECHH
T ss_conf 976663109--9999999999998831999998679---99886468766998--8830899999987488379997304
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 89999865200002014666678999998651268897322234565434567899986662344764445798012431
Q 000858 530 LPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVKFVG 609 (1251)
Q Consensus 530 ~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdrv~~~g 609 (1251)
+...+.
T Consensus 74 l~~~~~-------------------------------------------------------------------------- 79 (258)
T d1e32a2 74 IMSKLA-------------------------------------------------------------------------- 79 (258)
T ss_dssp HTTSCT--------------------------------------------------------------------------
T ss_pred HCCCCC--------------------------------------------------------------------------
T ss_conf 302545--------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 57878645888899987545516520235888751121037898678789887788875102455344699860467898
Q 000858 610 NVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVDKLA 689 (1251)
Q Consensus 610 ~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~c~~~~~~~~~~~~~~~d~~~~~~~~k~~ 689 (1251)
......
T Consensus 80 --------------------------------------------------------------------------g~~~~~ 85 (258)
T d1e32a2 80 --------------------------------------------------------------------------GESESN 85 (258)
T ss_dssp --------------------------------------------------------------------------THHHHH
T ss_pred --------------------------------------------------------------------------CCHHHH
T ss_conf --------------------------------------------------------------------------617888
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCHHHHHCC----C----HHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 999999986103789869997470334115----9----33689999987139--9988999622578863224899975
Q 000858 690 INELFEVALNESKSSPLIVFVKDIEKSLTG----N----NDAYGALKSKLENL--PSNVVVIGSHTQLDSRKEKSHPGGL 759 (1251)
Q Consensus 690 ~~~l~evl~ses~~~P~Ilfi~Dve~~l~~----~----~~~~~~l~~~L~~L--~g~VivIgs~~~~d~~k~k~~~~~~ 759 (1251)
+..+|+.+.. .+|.||||+|+|.++.. + ......+...++.. ..+|+|||+||
T Consensus 86 l~~~f~~A~~---~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn-------------- 148 (258)
T d1e32a2 86 LRKAFEEAEK---NAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATN-------------- 148 (258)
T ss_dssp HHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEES--------------
T ss_pred HHHHHHHHHH---CCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECC--------------
T ss_conf 8999999986---49949985211132257887777068999877500110123468811797579--------------
Q ss_pred EEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHHHHHHHHHHCCCCHH
Q ss_conf 0203576033220136899855223234562699989763179808853883467999--99999854334432032036
Q 000858 760 LFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNII 837 (1251)
Q Consensus 760 ~~~~~~~~~~~l~d~~~pd~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferqle~~Lpd~~gR~~Il 837 (1251)
.|+.+|+ |++| ||++++++++|+.+.|..|+
T Consensus 149 ----------------~~~~ld~-------------------------------al~r~gRfd~~i~~~~P~~~~R~~il 181 (258)
T d1e32a2 149 ----------------RPNSIDP-------------------------------ALRRFGRFDREVDIGIPDATGRLEIL 181 (258)
T ss_dssp ----------------CGGGSCG-------------------------------GGTSTTSSCEEEECCCCCHHHHHHHH
T ss_pred ----------------CCCCCCH-------------------------------HHHHCCCCCCEEECCCCCHHHHHHHH
T ss_conf ----------------9310252-------------------------------45424630232378999988999873
Q ss_pred HHHHHHHHCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC-CCC-CCCCCCHHHHHHHHHHHHH
Q ss_conf 78877330899-851000022025788878899987346556763115788878-842-1236721555988865433
Q 000858 838 SIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHCSEAPGKD-AKL-KISTESIMYGLNILQGIQS 912 (1251)
Q Consensus 838 ~IhT~l~~~~l-~~~dL~~La~~tkg~sgadIe~Lv~~A~s~Al~r~~~~i~~~-~kl-~Is~~sIkv~~~df~~al~ 912 (1251)
+.+.. ...+ ++.+++.|+..|.||+++||+.+|+.|...++.+....+... ... ..-.+.+.+...||..|+.
T Consensus 182 ~~~l~--~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~~~~~~~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 182 QIHTK--NMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp HHTTT--TSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCCBHHHHHHCCBCHHHHHHHHT
T ss_pred HHHCC--CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf 22045--76334553034444206677899999999999999998504334522544215651468668999999967
No 13
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=8.7e-21 Score=154.33 Aligned_cols=218 Identities=19% Similarity=0.250 Sum_probs=157.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 333334554430678999987422102455422-2247899888931202789815889999999984418719998466
Q 000858 450 EVSFESFPYYLSDITKNVLIASTYVHLKCNNFA-KYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1251)
Q Consensus 450 ~vsfd~FPYylse~tk~~L~~~~~~hL~~~~~~-k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~ 528 (1251)
++||+++--+ |+.|..|......+|+.++.. .++ -+..+.|||+||+| ....+||+|+|++++++++.++.+
T Consensus 3 ~~~f~di~G~--~~~k~~l~~~i~~~l~~~~~~~~~g---~~~~~giLL~Gp~G--tGKT~l~~ala~~~~~~~~~~~~~ 75 (265)
T d1r7ra3 3 QVTWEDIGGL--EDVKRELQELVQYPVEHPDKFLKFG---MTPSKGVLFYGPPG--CGKTLLAKAIANECQANFISIKGP 75 (265)
T ss_dssp CCSCSSCSSS--SCCCCHHHHHTHHHHHCHHHHHHCC---CCCCCEEEEBCCTT--SSHHHHHHHHHHHTTCEEEEECHH
T ss_pred CCCHHHHCCH--HHHHHHHHHHHHHHHHCHHHHHHCC---CCCCCEEEEECCCC--CCCHHHHHHHHHHHCCCEEEEEHH
T ss_conf 9989996678--9999999999999963999998679---99887578878998--763047788787718947998879
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 78999986520000201466667899999865126889732223456543456789998666234476444579801243
Q 000858 529 LLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVKFV 608 (1251)
Q Consensus 529 ~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdrv~~~ 608 (1251)
.+.+.+.
T Consensus 76 ~l~~~~~------------------------------------------------------------------------- 82 (265)
T d1r7ra3 76 ELLTMWF------------------------------------------------------------------------- 82 (265)
T ss_dssp HHHTSCT-------------------------------------------------------------------------
T ss_pred HHHHCCC-------------------------------------------------------------------------
T ss_conf 9525316-------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 15787864588889998754551652023588875112103789867878988778887510245534469986046789
Q 000858 609 GNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVDKL 688 (1251)
Q Consensus 609 g~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~c~~~~~~~~~~~~~~~d~~~~~~~~k~ 688 (1251)
....-
T Consensus 83 ---------------------------------------------------------------------------~~~~~ 87 (265)
T d1r7ra3 83 ---------------------------------------------------------------------------GESEA 87 (265)
T ss_dssp ---------------------------------------------------------------------------TTHHH
T ss_pred ---------------------------------------------------------------------------CCHHH
T ss_conf ---------------------------------------------------------------------------51589
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCHHHHHCC------C-----HHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCC
Q ss_conf 8999999986103789869997470334115------9-----336899999871399--98899962257886322489
Q 000858 689 AINELFEVALNESKSSPLIVFVKDIEKSLTG------N-----NDAYGALKSKLENLP--SNVVVIGSHTQLDSRKEKSH 755 (1251)
Q Consensus 689 ~~~~l~evl~ses~~~P~Ilfi~Dve~~l~~------~-----~~~~~~l~~~L~~L~--g~VivIgs~~~~d~~k~k~~ 755 (1251)
.+..+|..+.. ..|+||||+|+|.++.. + .+..+.|...|+.+. .+|+|||+||
T Consensus 88 ~l~~~f~~A~~---~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn---------- 154 (265)
T d1r7ra3 88 NVREIFDKARQ---AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN---------- 154 (265)
T ss_dssp HHHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCB----------
T ss_pred HHHHHHHHHHH---CCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC----------
T ss_conf 99999999986---39843568754632455787678873799999999999962867779989999179----------
Q ss_pred CCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHHHHHHHHHHCC
Q ss_conf 99750203576033220136899855223234562699989763179808853883467999--9999985433443203
Q 000858 756 PGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQ 833 (1251)
Q Consensus 756 ~~~~~~~~~~~~~~~l~d~~~pd~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferqle~~Lpd~~gR 833 (1251)
.|+.+|+ |++| ||+.+++++.|+...|
T Consensus 155 --------------------~~~~ld~-------------------------------al~r~gRf~~~i~~~~p~~~~R 183 (265)
T d1r7ra3 155 --------------------RPDIIDP-------------------------------AILRPGRLDQLIYIPLPDEKSR 183 (265)
T ss_dssp --------------------SCTTTSC-------------------------------GGGSSTTSEEEEECCCCCCHHH
T ss_pred --------------------CCHHCCH-------------------------------HHHCCCCCCEEEEECCHHHHHH
T ss_conf --------------------9222799-------------------------------7807877647999566078889
Q ss_pred CCHHHHHHHHHHCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 203678877330899-8510000220257888788999873465567631157888
Q 000858 834 SNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHCSEAPG 888 (1251)
Q Consensus 834 ~~Il~IhT~l~~~~l-~~~dL~~La~~tkg~sgadIe~Lv~~A~s~Al~r~~~~i~ 888 (1251)
.+|++.+.. ...+ .+.+++.|+..|.||+++||+.+|+.|...|+++..+...
T Consensus 184 ~~il~~~l~--~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~~~~~~ 237 (265)
T d1r7ra3 184 VAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 237 (265)
T ss_dssp HHHHHHHTT--CC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999960--577102436899982589999999999999999999998999899
No 14
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.80 E-value=7.9e-20 Score=147.90 Aligned_cols=216 Identities=24% Similarity=0.336 Sum_probs=147.5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 7543333345544306789999874221024554-222247899888931202789815889999999984418719998
Q 000858 447 ENIEVSFESFPYYLSDITKNVLIASTYVHLKCNN-FAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIV 525 (1251)
Q Consensus 447 ~~~~vsfd~FPYylse~tk~~L~~~~~~hL~~~~-~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~l 525 (1251)
|.-+||||+.--+ |.+|..|.+.... |++++ |.+++. +..+.|||.||+| ....+||||+|+..+.+++.+
T Consensus 2 ~~p~~~~~di~G~--~~~k~~l~~~i~~-l~~~~~~~~~g~---~~~~giLl~GppG--tGKT~la~aia~~~~~~~~~i 73 (247)
T d1ixza_ 2 EAPKVTFKDVAGA--EEAKEELKEIVEF-LKNPSRFHEMGA---RIPKGVLLVGPPG--VGKTHLARAVAGEARVPFITA 73 (247)
T ss_dssp CCCSCCGGGCCSC--HHHHHHHHHHHHH-HHCHHHHHHTTC---CCCSEEEEECCTT--SSHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHCCH--HHHHHHHHHHHHH-HHCHHHHHHCCC---CCCCEEEEECCCC--CCHHHHHHHHHHHCCCCEEEE
T ss_conf 9899749997157--9999999999999-879999997599---9886488766898--883599999998739977997
Q ss_pred ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 46678999986520000201466667899999865126889732223456543456789998666234476444579801
Q 000858 526 DSLLLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRV 605 (1251)
Q Consensus 526 Ds~~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdrv 605 (1251)
|.+.+.+
T Consensus 74 ~~~~l~~------------------------------------------------------------------------- 80 (247)
T d1ixza_ 74 SGSDFVE------------------------------------------------------------------------- 80 (247)
T ss_dssp EHHHHHH-------------------------------------------------------------------------
T ss_pred EHHHHHH-------------------------------------------------------------------------
T ss_conf 8699646-------------------------------------------------------------------------
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 24315787864588889998754551652023588875112103789867878988778887510245534469986046
Q 000858 606 KFVGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEV 685 (1251)
Q Consensus 606 ~~~g~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~c~~~~~~~~~~~~~~~d~~~~~~~ 685 (1251)
+|+| .
T Consensus 81 ~~~g---------------------------------------------------------------------------~ 85 (247)
T d1ixza_ 81 MFVG---------------------------------------------------------------------------V 85 (247)
T ss_dssp SCTT---------------------------------------------------------------------------H
T ss_pred CCCC---------------------------------------------------------------------------H
T ss_conf 2453---------------------------------------------------------------------------8
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC--------C---HHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCC
Q ss_conf 7898999999986103789869997470334115--------9---336899999871399--98899962257886322
Q 000858 686 DKLAINELFEVALNESKSSPLIVFVKDIEKSLTG--------N---NDAYGALKSKLENLP--SNVVVIGSHTQLDSRKE 752 (1251)
Q Consensus 686 ~k~~~~~l~evl~ses~~~P~Ilfi~Dve~~l~~--------~---~~~~~~l~~~L~~L~--g~VivIgs~~~~d~~k~ 752 (1251)
..-.++.+|+.+.. .+|.||||+|+|.++.. + ....+.|...++.+. .+|+|||+||
T Consensus 86 ~~~~l~~~f~~a~~---~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn------- 155 (247)
T d1ixza_ 86 GAARVRDLFETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATN------- 155 (247)
T ss_dssp HHHHHHHHHHHHTT---SSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEES-------
T ss_pred HHHHHHHHHHHHHH---CCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-------
T ss_conf 99999999999997---69979999773664746789988875899999999999963877789989998079-------
Q ss_pred CCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHHHHHHHHH
Q ss_conf 48999750203576033220136899855223234562699989763179808853883467999--9999985433443
Q 000858 753 KSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETL 830 (1251)
Q Consensus 753 k~~~~~~~~~~~~~~~~~l~d~~~pd~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferqle~~Lpd~ 830 (1251)
.|+.+|+ +++| ||+.+++++.|+.
T Consensus 156 -----------------------~~~~ld~-------------------------------al~R~~Rf~~~i~~~~P~~ 181 (247)
T d1ixza_ 156 -----------------------RPDILDP-------------------------------ALLRPGRFDRQIAIDAPDV 181 (247)
T ss_dssp -----------------------CGGGSCG-------------------------------GGGSTTSSCEEEECCSCCH
T ss_pred -----------------------CCCCCCH-------------------------------HHCCCCCCCEEEEECCCCH
T ss_conf -----------------------9400699-------------------------------6758987857999799699
Q ss_pred HCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 20320367887733089985100002202578887889998734655676311
Q 000858 831 KGQSNIISIRSVLSRNGLDCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHC 883 (1251)
Q Consensus 831 ~gR~~Il~IhT~l~~~~l~~~dL~~La~~tkg~sgadIe~Lv~~A~s~Al~r~ 883 (1251)
..|.+|++.+.... +...+.+++.|+..|.||+++||+.+|+.|...++.+.
T Consensus 182 ~eR~~il~~~l~~~-~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~ 233 (247)
T d1ixza_ 182 KGREQILRIHARGK-PLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG 233 (247)
T ss_dssp HHHHHHHHHHHTTS-CBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCC-CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999875065-77654689999977889889999999999999999868
No 15
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.78 E-value=1.4e-17 Score=132.78 Aligned_cols=188 Identities=24% Similarity=0.267 Sum_probs=133.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEECCC
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919-----9399995652
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSS 1019 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg-----~pfi~Id~s~ 1019 (1251)
..+|+|++|++++++.|+.++.. . ...++||+||||+|||++|+++|+++. .++++++++.
T Consensus 20 P~~~~diig~~~~~~~l~~~i~~----------~----~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~ 85 (231)
T d1iqpa2 20 PQRLDDIVGQEHIVKRLKHYVKT----------G----SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASD 85 (231)
T ss_dssp CCSTTTCCSCHHHHHHHHHHHHH----------T----CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTC
T ss_pred CCCHHHCCCCHHHHHHHHHHHHC----------C----CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 99899913939999999999985----------9----997699978999748799999999987314677715875676
Q ss_pred CCCCCCCCHHHHHHHHHH--HHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 110014740899999999--988309915998442000147899852799999998677640688556886489999438
Q 000858 1020 ITSKWFGEGEKYVKAVFS--LASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1251)
Q Consensus 1020 L~s~~~GesEk~Ir~iF~--~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN 1097 (1251)
..+.. .........+. ........||+|||+|.+.. ..+. .|+..+.. ...++.+|+++|
T Consensus 86 ~~~~~--~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~-----~~~~-------~ll~~l~~----~~~~~~~i~~~n 147 (231)
T d1iqpa2 86 ERGIN--VIREKVKEFARTKPIGGASFKIIFLDEADALTQ-----DAQQ-------ALRRTMEM----FSSNVRFILSCN 147 (231)
T ss_dssp HHHHH--TTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCH-----HHHH-------HHHHHHHH----TTTTEEEEEEES
T ss_pred CCCHH--HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCH-----HHHH-------HHHHHCCC----CCCCEEEEECCC
T ss_conf 66634--888888888751001578722886143443121-----4789-------87641124----776447886148
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 98887399982035442478999789999999999522268-8021999999838995999999999998
Q 000858 1098 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAA 1166 (1251)
Q Consensus 1098 ~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa 1166 (1251)
....+++++.+|+ ..+.+..|+..+...+++..+.++.+. ++..++.++....| ..+++-++++.+.
T Consensus 148 ~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g-diR~ai~~Lq~~~ 215 (231)
T d1iqpa2 148 YSSKIIEPIQSRC-AIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG-DMRRAINILQAAA 215 (231)
T ss_dssp CGGGSCHHHHHTE-EEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred CHHHCHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC-CHHHHHHHHHHHH
T ss_conf 7665657684731-210123343046778998889983999899999999998399-7999999999999
No 16
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.76 E-value=6.6e-17 Score=128.19 Aligned_cols=184 Identities=24% Similarity=0.283 Sum_probs=132.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC---------------
Q ss_conf 88411248399999999998740378255521788889932999958977499999999999199---------------
Q 000858 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA--------------- 1010 (1251)
Q Consensus 946 vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~--------------- 1010 (1251)
.+|+|++|++.+++.|...+.. .+.++.+||+||||+|||++|+++++++..
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~-------------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~ 75 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSL-------------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNC 75 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHT-------------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHH
T ss_pred CCHHHCCCHHHHHHHHHHHHHC-------------CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 9898815959999999999985-------------998705988889987589999999998468556666755542479
Q ss_pred ---------CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC----CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf ---------39999565211001474089999999998830----99159984420001478998527999999986776
Q 000858 1011 ---------NFINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV 1077 (1251)
Q Consensus 1011 ---------pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~----~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~ 1077 (1251)
.++.++.+... .-..++.++..+... ..-||+|||+|.| + ....+.|+.
T Consensus 76 ~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l-----~-------~~~q~~Llk 137 (239)
T d1njfa_ 76 REIEQGRFVDLIEIDAASRT------KVEDTRDLLDNVQYAPARGRFKVYLIDEVHML-----S-------RHSFNALLK 137 (239)
T ss_dssp HHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSCCCSCSSSSSEEEEEETGGGS-----C-------HHHHHHHHH
T ss_pred HHHHCCCCCEEEEECCHHCC------CHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC-----C-------HHHHHHHHH
T ss_conf 99974798707996112007------89999999999974652599879999781108-----9-------999999999
Q ss_pred HCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHH
Q ss_conf 4068855688648999943898887399982035442478999789999999999522268-802199999983899599
Q 000858 1078 NWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGS 1156 (1251)
Q Consensus 1078 ~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~ 1156 (1251)
.++.. ..++.+|++||.+..+.+++++|+ ..+.++.|+.++..+++...+..+... ++..++.++..+.|. .+
T Consensus 138 ~lE~~----~~~~~~il~tn~~~~i~~~i~SRc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~Gd-~R 211 (239)
T d1njfa_ 138 TLEEP----PEHVKFLLATTDPQKLPVTILSRC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGS-LR 211 (239)
T ss_dssp HHHSC----CTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTTC-HH
T ss_pred HHHCC----CCCEEEEEECCCCCCCCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC-HH
T ss_conf 98568----988699997388563676576121-0222246767876668878776431478999999999976997-99
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q 000858 1157 DLKNLCVTAA 1166 (1251)
Q Consensus 1157 DLk~Lv~~Aa 1166 (1251)
..-++++.|.
T Consensus 212 ~ain~l~~~~ 221 (239)
T d1njfa_ 212 DALSLTDQAI 221 (239)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 17
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.5e-18 Score=137.78 Aligned_cols=103 Identities=27% Similarity=0.465 Sum_probs=90.1
Q ss_pred CCCCEECCCCC--CCCCEEEECCEEEECCCCCCCEEECC-CCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCEECC
Q ss_conf 86300012367--89752564453687047852125249-9887553189982059965299998438744998695508
Q 000858 132 IPWARLISQCS--QNSHLSMTGAVFTVGHNRQCDLYLKD-PSISKNLCRLRRIENGGPSGALLEITGGKGEVEVNGNVHP 208 (1251)
Q Consensus 132 ~pW~rL~s~~~--~~p~~~i~~~~~t~G~~~~cd~~l~d-~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~v~vNg~~~~ 208 (1251)
.|||||+++.. ..+.+.+.+..|||||++.||+.|.| +.||..||+|...+.++. +++++.|+||| +|||+++.
T Consensus 2 ~pwg~Li~~~~~~~~~~~~l~~~~~~iGR~~~~di~l~d~~~iSr~Ha~I~~~~~~~~--~~~~d~S~nGT-~vNg~~i~ 78 (113)
T d1lgpa_ 2 QPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQ--VTLEDTSTSGT-VINKLKVV 78 (113)
T ss_dssp CCCEEECCTTCCSSSCCEEECSSEEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCC--EEEEECSSSCC-CCCCCCCC
T ss_pred CCEEEEEEECCCCCCEEEEECCCCEEECCCCCCCEEECCCCCCCHHHEEEEECCCEEE--EEECCCCCEEE-EECCEECC
T ss_conf 9739999977988854899699878418897787680488876959929987054036--87308986456-89999957
Q ss_pred CCCEEEEECCCEEEECCCC-----CEEEEEEECC
Q ss_conf 9863870079889981389-----7147964047
Q 000858 209 KDSQVVLRGGDELVFSPSG-----KHSYIFQQLS 237 (1251)
Q Consensus 209 k~~~~~L~~gdev~f~~~~-----~~ayifq~l~ 237 (1251)
|++.++|++||+|.|+... +.+|+|+++.
T Consensus 79 ~~~~~~L~~GD~I~i~~~~~~~~~~~~f~~e~~~ 112 (113)
T d1lgpa_ 79 KKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESLS 112 (113)
T ss_dssp CSSCCCCCTTCEEEEECCSSCGGGCEEEECCCSC
T ss_pred CCCEEECCCCCEEEEEECCCCCCCCEEEEEECCC
T ss_conf 8946898999999996658886314799998168
No 18
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=2.8e-17 Score=130.75 Aligned_cols=204 Identities=20% Similarity=0.210 Sum_probs=136.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEECCC
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919-----9399995652
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSS 1019 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg-----~pfi~Id~s~ 1019 (1251)
..+|+|++|++++++.|...+.. .. ..++||+||||+|||++|+++|++++ ..++.++.++
T Consensus 10 P~~~~divg~~~~~~~L~~~i~~-------------~~-~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~ 75 (227)
T d1sxjc2 10 PETLDEVYGQNEVITTVRKFVDE-------------GK-LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD 75 (227)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHT-------------TC-CCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTS
T ss_pred CCCHHHCCCCHHHHHHHHHHHHC-------------CC-CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 89999835969999999999976-------------99-98599988998775589999999851677764157731555
Q ss_pred CCCCCCCCHHHHHHHHHHH-HH-----HCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 1100147408999999999-88-----30991599844200014789985279999999867764068855688648999
Q 000858 1020 ITSKWFGEGEKYVKAVFSL-AS-----KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVL 1093 (1251)
Q Consensus 1020 L~s~~~GesEk~Ir~iF~~-A~-----k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVI 1093 (1251)
..+.. .....+.. +. .....||+|||+|.+. ...+. .++..++.. ...+.++
T Consensus 76 ~~~~~------~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~-----~~~~~-------~Ll~~le~~----~~~~~~~ 133 (227)
T d1sxjc2 76 DRGID------VVRNQIKDFASTRQIFSKGFKLIILDEADAMT-----NAAQN-------ALRRVIERY----TKNTRFC 133 (227)
T ss_dssp CCSHH------HHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC-----HHHHH-------HHHHHHHHT----TTTEEEE
T ss_pred CCCEE------EEECCHHHCCCCCCCCCCCEEEEEEECCCCCH-----HHHHH-------HHHHHHHHC----CCCEEEC
T ss_conf 68754------32100010111000257771899996632000-----23789-------999886311----2002320
Q ss_pred EECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 943898887399982035442478999789999999999522268-8021999999838995999999999998541699
Q 000858 1094 AATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAHCPIRE 1172 (1251)
Q Consensus 1094 aTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airr 1172 (1251)
.++|.+..+.+.+++|+ ..+.|..|+.++...++..++..+.+. ++..++.++..+.|. .+..-++++.+...
T Consensus 134 ~~~~~~~~i~~~i~sr~-~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~Gd-~R~ain~Lq~~~~~---- 207 (227)
T d1sxjc2 134 VLANYAHKLTPALLSQC-TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGD-MRRVLNVLQSCKAT---- 207 (227)
T ss_dssp EEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTC-HHHHHHHTTTTTTT----
T ss_pred CCCCCHHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHH----
T ss_conf 12670877599999887-5401235652000110212211112458989999999984996-99999999999985----
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9989899999998511599999886655445399999999
Q 000858 1173 ILEKEKKERALALAENRASPPLYSSVDVRPLKMDDFKYAH 1212 (1251)
Q Consensus 1173 ile~~~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al 1212 (1251)
....+...++.+++.+++
T Consensus 208 ----------------------~~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 208 ----------------------LDNPDEDEISDDVIYECC 225 (227)
T ss_dssp ----------------------TCSSSCCCBCHHHHHHHT
T ss_pred ----------------------CCCCCCCEECHHHHHHHH
T ss_conf ----------------------578888822899999976
No 19
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.74 E-value=2.5e-16 Score=124.29 Aligned_cols=223 Identities=17% Similarity=0.285 Sum_probs=155.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEE
Q ss_conf 84112483999999999987403782555217888899329999589774999999999991----------99399995
Q 000858 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINIS 1016 (1251)
Q Consensus 947 tfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el----------g~pfi~Id 1016 (1251)
.++.++|.++....+.+.+. .+..+++||.||||+|||.+++.+|... +..++.++
T Consensus 16 ~ld~~igRd~Ei~~l~~iL~--------------r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~ 81 (268)
T d1r6bx2 16 GIDPLIGREKELERAIQVLC--------------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 81 (268)
T ss_dssp CSCCCCSCHHHHHHHHHHHT--------------SSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHH--------------CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
T ss_conf 99866380999999999995--------------4766896798889886779999999999817845000354127864
Q ss_pred CCCCCC--CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 652110--014740899999999988309915998442000147899852799999998677640688556886489999
Q 000858 1017 MSSITS--KWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA 1094 (1251)
Q Consensus 1017 ~s~L~s--~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIa 1094 (1251)
+..+.. .+.|+.+..+..++..+......||||||++.|++.....+.......++...+ .++.+.+|+
T Consensus 82 ~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L---------~rg~i~vIg 152 (268)
T d1r6bx2 82 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSGKIRVIG 152 (268)
T ss_dssp CC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCS---------SSCCCEEEE
T ss_pred ECHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHH---------HCCCCEEEE
T ss_conf 05675067630058999999999861267846884336988627777886411798764887---------479875999
Q ss_pred ECCC-----CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC----CC-CCHHCHHHHHHHCC------CCCHHHH
Q ss_conf 4389-----8887399982035442478999789999999999522----26-88021999999838------9959999
Q 000858 1095 ATNR-----PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE----EL-ASDVDLEGIANMAD------GYSGSDL 1158 (1251)
Q Consensus 1095 TTN~-----pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~----~l-~~dvdl~~LA~~T~------Gysg~DL 1158 (1251)
+|+. ...-|++|.||| ..|.+..|+.++-..|++.+.... .+ ..+..+..+...+. .+....|
T Consensus 153 atT~eey~~~~e~d~al~rrF-~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAI 231 (268)
T d1r6bx2 153 STTYQEFSNIFEKDRALARRF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 231 (268)
T ss_dssp EECHHHHHCCCCCTTSSGGGE-EEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHH
T ss_pred ECCHHHHHHHHHHCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 579999999986167888652-1003689899999999998668885268778574789999999985604788984899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 9999999854169999898999999985115999998866554453999999999815
Q 000858 1159 KNLCVTAAHCPIREILEKEKKERALALAENRASPPLYSSVDVRPLKMDDFKYAHEQVC 1216 (1251)
Q Consensus 1159 k~Lv~~Aa~~airrile~~~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~kv~ 1216 (1251)
. ++..|+..+... ........+..+|+...+.++.
T Consensus 232 d-llDea~a~~~~~----------------------~~~~~~~~i~~~di~~~i~~~~ 266 (268)
T d1r6bx2 232 D-VIDEAGARARLM----------------------PVSKRKKTVNVADIESVVARIA 266 (268)
T ss_dssp H-HHHHHHHHHHHS----------------------SSCCCCCSCCHHHHHHHHHHHS
T ss_pred H-HHHHHHHHHHHH----------------------CCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9-999999999850----------------------0246766479999999999984
No 20
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=1.7e-16 Score=125.37 Aligned_cols=197 Identities=19% Similarity=0.258 Sum_probs=126.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCC-CHHHH--HCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 88841124839999999999874037-82555--2178888993299995897749999999999919939999565211
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQ-RPELF--CKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1021 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~-rpelf--~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~ 1021 (1251)
..+|++++|.+..+++|.+.+..... .+..+ ....-..+.+++||+||||||||++|+++|++++++++.++++...
T Consensus 10 P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~ 89 (253)
T d1sxja2 10 PTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVR 89 (253)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCC
T ss_pred CCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 99999966989999999999996253002343232025788874499987999988899999999987512013443221
Q ss_pred CCCCCCHHHHHHHH---------H-----HHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 00147408999999---------9-----998830991599844200014789985279999999867764068855688
Q 000858 1022 SKWFGEGEKYVKAV---------F-----SLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDK 1087 (1251)
Q Consensus 1022 s~~~GesEk~Ir~i---------F-----~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~ 1087 (1251)
+.+... ..+... | .........+|++||+|.+..... ..... ++..... ..
T Consensus 90 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~-----~~~~~----~~~~~~~----~~ 154 (253)
T d1sxja2 90 SKTLLN--AGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDR-----GGVGQ----LAQFCRK----TS 154 (253)
T ss_dssp CHHHHH--HTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTST-----THHHH----HHHHHHH----CS
T ss_pred HHHHHH--HHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHH-----HHHHH----HHHHHCC----CC
T ss_conf 168899--999887631212101334320145566513777630111110001-----34677----7654012----34
Q ss_pred CCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHH
Q ss_conf 648999943898887399982035442478999789999999999522268-802199999983899599999999
Q 000858 1088 ERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLC 1162 (1251)
Q Consensus 1088 ~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv 1162 (1251)
.+++++++++....+++ + +++...+.|+.|+.+++..+++.++.++.+. ++..++.|+..+.| |++.++
T Consensus 155 ~~ii~i~~~~~~~~~~~-l-~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~G----DiR~ai 224 (253)
T d1sxja2 155 TPLILICNERNLPKMRP-F-DRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRG----DIRQVI 224 (253)
T ss_dssp SCEEEEESCTTSSTTGG-G-TTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTT----CHHHHH
T ss_pred CCCCCCCCCCCCCCCCC-C-CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC----CHHHHH
T ss_conf 22211135555211353-2-4403653114531467889999999980999999999999996797----099999
No 21
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.71 E-value=1.2e-14 Score=113.10 Aligned_cols=222 Identities=13% Similarity=0.064 Sum_probs=142.7
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECCCCCCC-
Q ss_conf 112483999999999987403782555217888899329999589774999999999991----993999956521100-
Q 000858 949 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSITSK- 1023 (1251)
Q Consensus 949 ddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el----g~pfi~Id~s~L~s~- 1023 (1251)
+.++|.+...+.+.+++...+.++ ..++.++||+||||||||++++++++.+ ++.++.+++......
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~~--------~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 87 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRNP--------GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFT 87 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHST--------TSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCC--------CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
T ss_conf 878877999999999999998578--------988881688898999899999999999754468857873230011246
Q ss_pred ---------------CCCCHHH-HHHHHHHHHHH-CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf ---------------1474089-99999999883-099159984420001478998527999999986776406885568
Q 000858 1024 ---------------WFGEGEK-YVKAVFSLASK-IAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1086 (1251)
Q Consensus 1024 ---------------~~GesEk-~Ir~iF~~A~k-~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~ 1086 (1251)
..+.... ....+...... ....++++|++|.+.. . .......++..+ ....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------~-~~~~~~~~~~~~---~~~~ 155 (276)
T d1fnna2 88 AIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAP--------D-ILSTFIRLGQEA---DKLG 155 (276)
T ss_dssp HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCH--------H-HHHHHHHHTTCH---HHHS
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH--------H-HHHHHHHHHHCC---CCCC
T ss_conf 665456776433455532543578999999875206543320368887535--------4-310688887404---4335
Q ss_pred CCCEEEEEECCCC---CCCCHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCC---CCCHHCHHHHHHHCCC-------
Q ss_conf 8648999943898---887399982035-4424789997899999999995222---6880219999998389-------
Q 000858 1087 KERVLVLAATNRP---FDLDEAVVRRLP-RRLMVNLPDAPNREKIIRVILAKEE---LASDVDLEGIANMADG------- 1152 (1251)
Q Consensus 1087 ~~~VlVIaTTN~p---e~Ld~aLlrRF~-~~I~I~lPd~eeR~eILk~ll~k~~---l~~dvdl~~LA~~T~G------- 1152 (1251)
..++.+|++++.. +.+++.+.+|+. ..+.|+.|+.+++.+|++..+.... ..++..+..++..+..
T Consensus 156 ~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~ 235 (276)
T d1fnna2 156 AFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTN 235 (276)
T ss_dssp SCCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTT
T ss_pred CCCEEEEECCCCHHHHHHCCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 65248862587645443113036655110110344123888999999999985245666378999999970014446553
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf -9599999999999854169999898999999985115999998866554453999999999815
Q 000858 1153 -YSGSDLKNLCVTAAHCPIREILEKEKKERALALAENRASPPLYSSVDVRPLKMDDFKYAHEQVC 1216 (1251)
Q Consensus 1153 -ysg~DLk~Lv~~Aa~~airrile~~~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~kv~ 1216 (1251)
-+++.+.++|+.|+..+..+ ..+.|+++|+++|.+++-
T Consensus 236 ~G~~R~a~~ll~~a~~~A~~~--------------------------~~~~I~~edv~~A~~~~~ 274 (276)
T d1fnna2 236 RGDARLAIDILYRSAYAAQQN--------------------------GRKHIAPEDVRKSSKEVL 274 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHHT--------------------------TCSSCCHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHC--------------------------CCCCCCHHHHHHHHHHHH
T ss_conf 899999999999999999981--------------------------899849999999999985
No 22
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=1.1e-15 Score=120.10 Aligned_cols=183 Identities=19% Similarity=0.193 Sum_probs=129.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEECCC
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919-----9399995652
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSS 1019 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg-----~pfi~Id~s~ 1019 (1251)
..+|+|++|++++++.|+..+.. + ...++||+||||+|||++|+.+|++++ ..++.+++++
T Consensus 11 P~~~~d~ig~~~~~~~L~~~~~~----------~----~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~ 76 (224)
T d1sxjb2 11 PQVLSDIVGNKETIDRLQQIAKD----------G----NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD 76 (224)
T ss_dssp CSSGGGCCSCTHHHHHHHHHHHS----------C----CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTS
T ss_pred CCCHHHHCCCHHHHHHHHHHHHC----------C----CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 89899902979999999999986----------9----987499988999870546999999972566432211111345
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH-------CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
Q ss_conf 1100147408999999999883-------099159984420001478998527999999986776406885568864899
Q 000858 1020 ITSKWFGEGEKYVKAVFSLASK-------IAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLV 1092 (1251)
Q Consensus 1020 L~s~~~GesEk~Ir~iF~~A~k-------~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlV 1092 (1251)
..+. ..+...+..... ....||+|||+|.+. .. ..+.++..++. ......+
T Consensus 77 ~~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~-----~~-------~~~~ll~~~e~----~~~~~~~ 134 (224)
T d1sxjb2 77 DRGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT-----AG-------AQQALRRTMEL----YSNSTRF 134 (224)
T ss_dssp CCSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC-----HH-------HHHTTHHHHHH----TTTTEEE
T ss_pred CCCC------EEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC-----HH-------HHHHHHHHCCC----CCCCEEE
T ss_conf 5785------2116678878876224777635999982443232-----15-------77877520112----3333366
Q ss_pred EEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 9943898887399982035442478999789999999999522268-802199999983899599999999999
Q 000858 1093 LAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTA 1165 (1251)
Q Consensus 1093 IaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~A 1165 (1251)
+.+++....+.+++++|+ ..+.|+.|+.++...++..++.++.+. ++..+..++....|.....| ++++.+
T Consensus 135 i~~~~~~~~i~~~l~sr~-~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai-~~Lq~~ 206 (224)
T d1sxjb2 135 AFACNQSNKIIEPLQSQC-AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAI-NNLQST 206 (224)
T ss_dssp EEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred EECCCCHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH-HHHHHH
T ss_conf 531474302106788777-776531332245678887777740467899999999998699699999-999999
No 23
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=3.3e-15 Score=116.76 Aligned_cols=189 Identities=20% Similarity=0.214 Sum_probs=127.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH------CCCEEEEECC
Q ss_conf 8884112483999999999987403782555217888899329999589774999999999991------9939999565
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA------GANFINISMS 1018 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el------g~pfi~Id~s 1018 (1251)
..+|++++|.+++++.|+..+.. . ...++||+||||+|||++++++++++ ....+.+++.
T Consensus 8 P~~~~diig~~~~~~~l~~~i~~-------------~-~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~ 73 (237)
T d1sxjd2 8 PKNLDEVTAQDHAVTVLKKTLKS-------------A-NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNAS 73 (237)
T ss_dssp CSSTTTCCSCCTTHHHHHHHTTC-------------T-TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSS
T ss_pred CCCHHHCCCCHHHHHHHHHHHHC-------------C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHEECC
T ss_conf 89788726939999999999986-------------9-988599989999984999999999970976334321220021
Q ss_pred CCCCCCCCCHHHHHHHHH------------HHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 211001474089999999------------99883099159984420001478998527999999986776406885568
Q 000858 1019 SITSKWFGEGEKYVKAVF------------SLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1086 (1251)
Q Consensus 1019 ~L~s~~~GesEk~Ir~iF------------~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~ 1086 (1251)
...+... ....+.... .........||+|||+|.+.. ... +.++..+.. .
T Consensus 74 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~-----~~~-------~~l~~~~~~----~ 135 (237)
T d1sxjd2 74 DERGISI--VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA-----DAQ-------SALRRTMET----Y 135 (237)
T ss_dssp SCCCHHH--HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCH-----HHH-------HHHHHHHHH----T
T ss_pred CCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH-----HHH-------HHHHHCCCC----C
T ss_conf 1356067--899998876544432467877613566736999955133677-----778-------887630122----2
Q ss_pred CCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 8648999943898887399982035442478999789999999999522268-802199999983899599999999999
Q 000858 1087 KERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTA 1165 (1251)
Q Consensus 1087 ~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~A 1165 (1251)
.....+|.+++....+.+.+.+|| ..+.|..|+.++...+++.++.++.+. ++..++.|+....|-.. ..-++++.+
T Consensus 136 ~~~~~~i~~~~~~~~~~~~l~sr~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd~R-~ai~~L~~~ 213 (237)
T d1sxjd2 136 SGVTRFCLICNYVTRIIDPLASQC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLR-RGITLLQSA 213 (237)
T ss_dssp TTTEEEEEEESCGGGSCHHHHHHS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHH-HHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHH-HHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH-HHHHHHHHH
T ss_conf 233332122466422233111000-110233333321100101145552675789999999998599899-999999999
Q ss_pred HH
Q ss_conf 85
Q 000858 1166 AH 1167 (1251)
Q Consensus 1166 a~ 1167 (1251)
+.
T Consensus 214 ~~ 215 (237)
T d1sxjd2 214 SK 215 (237)
T ss_dssp HH
T ss_pred HH
T ss_conf 97
No 24
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.67 E-value=5.1e-15 Score=115.50 Aligned_cols=180 Identities=14% Similarity=0.219 Sum_probs=115.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC---CCEEEEECCCC-
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919---93999956521-
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISMSSI- 1020 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg---~pfi~Id~s~L- 1020 (1251)
..+|++++|.+++++.|..++.. ...+.++||+||||+|||++|+++|+++. .....++....
T Consensus 7 P~~~~diig~~~~~~~L~~~~~~-------------~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~ 73 (252)
T d1sxje2 7 PKSLNALSHNEELTNFLKSLSDQ-------------PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 73 (252)
T ss_dssp CCSGGGCCSCHHHHHHHHTTTTC-------------TTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC---------
T ss_pred CCCHHHCCCCHHHHHHHHHHHHC-------------CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 89798835839999999999976-------------99878599889999988999999997622764222221234443
Q ss_pred --------------------CCCCCCCHH-HHHHHHHHHHH--------------HCCCCEEEECCCCCCCCCCCCCCHH
Q ss_conf --------------------100147408-99999999988--------------3099159984420001478998527
Q 000858 1021 --------------------TSKWFGEGE-KYVKAVFSLAS--------------KIAPSVVFVDEVDSMLGRRENPGEH 1065 (1251)
Q Consensus 1021 --------------------~s~~~GesE-k~Ir~iF~~A~--------------k~~PsIIfIDEID~L~~~r~~~~~~ 1065 (1251)
.....+... ..+........ .....+|+|||+|.+. ...+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~-----~~~~ 148 (252)
T d1sxje2 74 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT-----KDAQ 148 (252)
T ss_dssp ---------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC-----HHHH
T ss_pred CCCCCHHHHHHCCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-----CCCC
T ss_conf 46663112211047763100001044577522431022343433100121146667872499942433345-----4311
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCHHCH
Q ss_conf 999999986776406885568864899994389888739998203544247899978999999999952226--880219
Q 000858 1066 EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEEL--ASDVDL 1143 (1251)
Q Consensus 1066 ~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l--~~dvdl 1143 (1251)
+.++..++. ...++.+|++||.++.+.+.+++|| ..|.|+.|+.++..++++.++..+.. ..+..+
T Consensus 149 -------~~l~~~~e~----~~~~~~~Il~tn~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l 216 (252)
T d1sxje2 149 -------AALRRTMEK----YSKNIRLIMVCDSMSPIIAPIKSQC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDIL 216 (252)
T ss_dssp -------HHHHHHHHH----STTTEEEEEEESCSCSSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHH
T ss_pred -------HHHHCCCCC----CCCCCCCEEEECCCCCHHHHHHCCH-HEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf -------122100221----3566430001021110025442100-0243035330468999999999839998969999
Q ss_pred HHHHHHCCCCC
Q ss_conf 99999838995
Q 000858 1144 EGIANMADGYS 1154 (1251)
Q Consensus 1144 ~~LA~~T~Gys 1154 (1251)
+.|+..+.|..
T Consensus 217 ~~i~~~s~Gd~ 227 (252)
T d1sxje2 217 KRIAQASNGNL 227 (252)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHCCCCH
T ss_conf 99999869949
No 25
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.65 E-value=2.5e-14 Score=110.84 Aligned_cols=205 Identities=16% Similarity=0.211 Sum_probs=130.2
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC-----C
Q ss_conf 12483999999999987403782555217888899329999589774999999999991993999956521100-----1
Q 000858 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK-----W 1024 (1251)
Q Consensus 950 dI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~-----~ 1024 (1251)
.++|++++++.+.+.+...... + ....+|...+||.||+|+|||.||+++|..++.+|+.++|+++... .
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~--l---~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l 97 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAG--L---GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRL 97 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTT--C---SCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSS
T ss_pred EECCHHHHHHHHHHHHHHHHCC--C---CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
T ss_conf 0648599999999999999726--7---8888876589997787500699999998633677067415444554466652
Q ss_pred CCCHH----HHHH-HHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-------CCCCCCEEE
Q ss_conf 47408----9999-99999883099159984420001478998527999999986776406885-------568864899
Q 000858 1025 FGEGE----KYVK-AVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-------TKDKERVLV 1092 (1251)
Q Consensus 1025 ~GesE----k~Ir-~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~-------~k~~~~VlV 1092 (1251)
+|... .... .+.....+.+.+|+++||||... ..+.+.|+..++... .-+-.+.++
T Consensus 98 ~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa~------------~~V~~~lLqild~G~ltd~~Gr~vdf~n~ii 165 (315)
T d1r6bx3 98 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH------------PDVFNILLQVMDNGTLTDNNGRKADFRNVVL 165 (315)
T ss_dssp CCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGSC------------HHHHHHHHHHHHHSEEEETTTEEEECTTEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCC------------CHHHHHHHHHHCCCEECCCCCCCCCCCCEEE
T ss_conf 1467875011468703377773854302212223016------------3376656776214602588997268632588
Q ss_pred EEECCCC-------------------------CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC---------C-
Q ss_conf 9943898-------------------------8873999820354424789997899999999995222---------6-
Q 000858 1093 LAATNRP-------------------------FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEE---------L- 1137 (1251)
Q Consensus 1093 IaTTN~p-------------------------e~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~---------l- 1137 (1251)
|+|+|-- ..+.|.++.|++.++.+.+.+.++...|+..++.... +
T Consensus 166 I~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~ 245 (315)
T d1r6bx3 166 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE 245 (315)
T ss_dssp EEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 84144016888862000005666676899999754898986632100136301558999999999999999876486220
Q ss_pred CCHHCHHHHHHH--CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 880219999998--3899599999999999854169
Q 000858 1138 ASDVDLEGIANM--ADGYSGSDLKNLCVTAAHCPIR 1171 (1251)
Q Consensus 1138 ~~dvdl~~LA~~--T~Gysg~DLk~Lv~~Aa~~air 1171 (1251)
.++..+..|+.. ...+..+.|+.+++.-...++.
T Consensus 246 ~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~~i~~~la 281 (315)
T d1r6bx3 246 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 281 (315)
T ss_dssp ECHHHHHHHHHHHCBTTTBTTTHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 279999999996789777841699999999999999
No 26
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.65 E-value=1.9e-14 Score=111.59 Aligned_cols=206 Identities=17% Similarity=0.259 Sum_probs=132.7
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCC----
Q ss_conf 12483999999999987403782555217888899329999589774999999999991---99399995652110----
Q 000858 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS---- 1022 (1251)
Q Consensus 950 dI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s---- 1022 (1251)
.+.|++.+++.+...+...... -....+|...+||+||+|+|||.+|+.+|..+ +.+|+.++++++..
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~-----l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~ 98 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAG-----LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAV 98 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGG-----CSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGG
T ss_pred EEECHHHHHHHHHHHHHHHHCC-----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
T ss_conf 2708799999999999998657-----89988876699997888624899999999983588753488731554542156
Q ss_pred -CCCCCHHHHH----HH-HHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-------CCCCC
Q ss_conf -0147408999----99-99998830991599844200014789985279999999867764068855-------68864
Q 000858 1023 -KWFGEGEKYV----KA-VFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT-------KDKER 1089 (1251)
Q Consensus 1023 -~~~GesEk~I----r~-iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~-------k~~~~ 1089 (1251)
..+|....++ .. +....++++.+||+|||||... ..+.+.|+..++.-.. -.-.+
T Consensus 99 ~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~~------------~~v~~~ll~~l~~g~~~~~~gr~v~~~~ 166 (315)
T d1qvra3 99 SRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAH------------PDVFNILLQILDDGRLTDSHGRTVDFRN 166 (315)
T ss_dssp GGC--------------CHHHHHHHCSSEEEEESSGGGSC------------HHHHHHHHHHHTTTEECCSSSCCEECTT
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHCC------------HHHHHHHHHHHCCCCEECCCCCEECCCC
T ss_conf 6514899987674667848999984998379971475407------------8999899998613834279996853754
Q ss_pred EEEEEECCC--------------------------CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC-------
Q ss_conf 899994389--------------------------88873999820354424789997899999999995222-------
Q 000858 1090 VLVLAATNR--------------------------PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEE------- 1136 (1251)
Q Consensus 1090 VlVIaTTN~--------------------------pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~------- 1136 (1251)
.++|+|||- ...+.+.++.||+.++.+.+.+.++..+|+...+....
T Consensus 167 ~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~ 246 (315)
T d1qvra3 167 TVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKR 246 (315)
T ss_dssp EEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 28987424576777640011220455567788888862388787217805432102454368999999999999987242
Q ss_pred --C-CCHHCHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --6-880219999998--38995999999999998541699
Q 000858 1137 --L-ASDVDLEGIANM--ADGYSGSDLKNLCVTAAHCPIRE 1172 (1251)
Q Consensus 1137 --l-~~dvdl~~LA~~--T~Gysg~DLk~Lv~~Aa~~airr 1172 (1251)
+ .++...+.|+.. ...|..+.|+.+++.....++.+
T Consensus 247 i~l~i~~~~~~~L~~~~y~~~~GAR~L~r~Ie~~i~~~La~ 287 (315)
T d1qvra3 247 ISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQ 287 (315)
T ss_dssp CEEEECHHHHHHHHHHHCBTTTBTSTHHHHHHHHTHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02206699999999948898778210899999998999999
No 27
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.64 E-value=2.8e-14 Score=110.53 Aligned_cols=230 Identities=14% Similarity=0.005 Sum_probs=138.6
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---------CCCEEEEECCC
Q ss_conf 112483999999999987403782555217888899329999589774999999999991---------99399995652
Q 000858 949 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---------GANFINISMSS 1019 (1251)
Q Consensus 949 ddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el---------g~pfi~Id~s~ 1019 (1251)
+.+.+.+...+.|...+..++.+. .....++..++|+||||||||++++++++++ ...+..+++..
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~~-----~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 90 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLSG-----AGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFN 90 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHTS-----SCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCC-----CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf 988878999999999999999749-----988885348996789998999999999999875415556784166303333
Q ss_pred CCCC----------------CCCCHHHHHHHHH-HHHHHC-CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 1100----------------1474089999999-998830-991599844200014789985279999999867764068
Q 000858 1020 ITSK----------------WFGEGEKYVKAVF-SLASKI-APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG 1081 (1251)
Q Consensus 1020 L~s~----------------~~GesEk~Ir~iF-~~A~k~-~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldg 1081 (1251)
.... ..+.....+...+ ...... .+.++++|++|.+....... ..... .+..++..+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~--~~~~~-~l~~l~~~l~~ 167 (287)
T d1w5sa2 91 APNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIA--AEDLY-TLLRVHEEIPS 167 (287)
T ss_dssp CCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSC--HHHHH-HHHTHHHHSCC
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC--HHHHH-HHHHHHHHCCH
T ss_conf 4650467888765304323334512788999999999854676654125788851566554--26789-88999874320
Q ss_pred CCCCCCCCEEEEEECCCCCC------CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC---CCHHCHHHHHHHCCC
Q ss_conf 85568864899994389888------739998203544247899978999999999952226---880219999998389
Q 000858 1082 LRTKDKERVLVLAATNRPFD------LDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEEL---ASDVDLEGIANMADG 1152 (1251)
Q Consensus 1082 l~~k~~~~VlVIaTTN~pe~------Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l---~~dvdl~~LA~~T~G 1152 (1251)
... ...+.+|+.++..+. ..+.+.+||...+.++.|+.++..+|++..++.... .++..++.++..+..
T Consensus 168 ~~~--~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~ 245 (287)
T d1w5sa2 168 RDG--VNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGE 245 (287)
T ss_dssp TTS--CCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCG
T ss_pred HHC--CCCEEEEEECCCHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 104--565147762430899999986252011232206522577599999987666777524687799999999999723
Q ss_pred C-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9-----5999999999998541699998989999999851159999988665544539999999998
Q 000858 1153 Y-----SGSDLKNLCVTAAHCPIREILEKEKKERALALAENRASPPLYSSVDVRPLKMDDFKYAHEQ 1214 (1251)
Q Consensus 1153 y-----sg~DLk~Lv~~Aa~~airrile~~~~ek~~a~~e~~~~~~~~~~~~~r~LtmeDF~~Al~k 1214 (1251)
+ ..+...++|+.|+..+..+ ....|+.+|+.+|+.+
T Consensus 246 ~~~~~gd~R~ai~~l~~a~~~A~~~--------------------------~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 246 DKGGDGSARRAIVALKMACEMAEAM--------------------------GRDSLSEDLVRKAVSE 286 (287)
T ss_dssp GGTSCCCHHHHHHHHHHHHHHHHHT--------------------------TCSSCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHC--------------------------CCCCCCHHHHHHHHHC
T ss_conf 0367889999999999999999984--------------------------9998799999999846
No 28
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.63 E-value=8.5e-15 Score=114.00 Aligned_cols=196 Identities=22% Similarity=0.359 Sum_probs=137.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEE
Q ss_conf 84112483999999999987403782555217888899329999589774999999999991----------99399995
Q 000858 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINIS 1016 (1251)
Q Consensus 947 tfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el----------g~pfi~Id 1016 (1251)
.++.++|.+.....+.+.+.- +..+++||.|+||+|||.++..+|... +..++.++
T Consensus 20 ~ld~~~gr~~ei~~~~~~L~r--------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld 85 (387)
T d1qvra2 20 KLDPVIGRDEEIRRVIQILLR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQ 85 (387)
T ss_dssp CSCCCCSCHHHHHHHHHHHHC--------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHC--------------CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEE
T ss_conf 999874808999999999824--------------889997687999988999999999999808999788696689955
Q ss_pred CCCCCC--CCCCCHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 652110--014740899999999988309-91599844200014789985279999999867764068855688648999
Q 000858 1017 MSSITS--KWFGEGEKYVKAVFSLASKIA-PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVL 1093 (1251)
Q Consensus 1017 ~s~L~s--~~~GesEk~Ir~iF~~A~k~~-PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVI 1093 (1251)
++.|.. .+.|+.+..+..++..+.... +.||||||++.|++.....+.... ..++...+ .++.+.+|
T Consensus 86 ~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~-a~~Lkp~L---------~rg~~~~I 155 (387)
T d1qvra2 86 MGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDA-GNMLKPAL---------ARGELRLI 155 (387)
T ss_dssp C-----------CHHHHHHHHHHHHHTTCSSEEEEECCC--------------------HHHH---------HTTCCCEE
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCH-HHHHHHHH---------HCCCCCEE
T ss_conf 766652667413689999999998505899669872408888427778774138-99999997---------37885166
Q ss_pred EECCCC----CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC----C-CCHHCHHHHHHHC-----CCCCHHHHH
Q ss_conf 943898----8873999820354424789997899999999995222----6-8802199999983-----899599999
Q 000858 1094 AATNRP----FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEE----L-ASDVDLEGIANMA-----DGYSGSDLK 1159 (1251)
Q Consensus 1094 aTTN~p----e~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~----l-~~dvdl~~LA~~T-----~Gysg~DLk 1159 (1251)
++|..- ..-|++|.||| ..|.|..|+.++-..|++.+..... + ..+..+......+ +.+-|.---
T Consensus 156 ~~tT~~ey~~~e~d~al~rrF-~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAi 234 (387)
T d1qvra2 156 GATTLDEYREIEKDPALERRF-QPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAI 234 (387)
T ss_dssp EEECHHHHHHHTTCTTTCSCC-CCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHH
T ss_pred EECCHHHHHHHCCCHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 636899998763367999824-6112799867889999999999987404774669999999985023666566704688
Q ss_pred HHHHHHHH
Q ss_conf 99999985
Q 000858 1160 NLCVTAAH 1167 (1251)
Q Consensus 1160 ~Lv~~Aa~ 1167 (1251)
.++..|+.
T Consensus 235 dlld~a~a 242 (387)
T d1qvra2 235 DLIDEAAA 242 (387)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 29
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.61 E-value=3.4e-14 Score=109.91 Aligned_cols=179 Identities=24% Similarity=0.360 Sum_probs=109.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC-CCCCH-
Q ss_conf 2483999999999987403782555217888899329999589774999999999991993999956521100-14740-
Q 000858 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK-WFGEG- 1028 (1251)
Q Consensus 951 I~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~-~~Ges- 1028 (1251)
++|++++|+.|--++....+|-..-......-.+.+|||.||+|||||+||+++|+.++.||+.++|+.+... |.|..
T Consensus 16 VvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG~DV 95 (443)
T d1g41a_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV 95 (443)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CCCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCEEEECCEEECCH
T ss_conf 22808999999999999998862365444445656479989999889999999998738988986255114111110444
Q ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Q ss_conf 899999999988--------------------------------------------------------------------
Q 000858 1029 EKYVKAVFSLAS-------------------------------------------------------------------- 1040 (1251)
Q Consensus 1029 Ek~Ir~iF~~A~-------------------------------------------------------------------- 1040 (1251)
+..++.+...|.
T Consensus 96 esii~~L~~~a~~~v~~~e~~~V~~~~~~~~~e~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~G~~~~~~~~~~ 175 (443)
T d1g41a_ 96 DSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQWGEVENHDSHSSTRQAFRKKLREGQLDDKEIEID 175 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC--------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 57899999987550899999999999999888889987413335665543321001346677999974588555434344
Q ss_pred -----------------------------------------------------------------------HCCCCEEEE
Q ss_conf -----------------------------------------------------------------------309915998
Q 000858 1041 -----------------------------------------------------------------------KIAPSVVFV 1049 (1251)
Q Consensus 1041 -----------------------------------------------------------------------k~~PsIIfI 1049 (1251)
-...+++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~i~~~ai~~v~~~~~~~~ 255 (443)
T d1g41a_ 176 VSAGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKAIDAVEQNGIVFI 255 (443)
T ss_dssp -------------------------------------------------CCGGGSCSSCCHHHHHHHHHHHHHHHCEEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 45677866544565310122126777641247765531233137778887777765214426789999998742675554
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC------CCCCCEEEEEEC----CCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 44200014789985279999999867764068855------688648999943----89888739998203544247899
Q 000858 1050 DEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT------KDKERVLVLAAT----NRPFDLDEAVVRRLPRRLMVNLP 1119 (1251)
Q Consensus 1050 DEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~------k~~~~VlVIaTT----N~pe~Ld~aLlrRF~~~I~I~lP 1119 (1251)
||++.........+.......+...++..+.+... .....+++|+++ ..+..|-|.|..||+.++.+...
T Consensus 256 dei~k~~~~~~~~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~gliPEliGRlPi~v~L~~L 335 (443)
T d1g41a_ 256 DEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTAL 335 (443)
T ss_dssp ETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGGGSCHHHHTTCCEEEECCCC
T ss_pred CHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCHHHHCCCEEEEEECCCC
T ss_conf 22334430356778774300134544320146654555664454210001465222215443215334635899974674
Q ss_pred CHHHHHHHHH
Q ss_conf 9789999999
Q 000858 1120 DAPNREKIIR 1129 (1251)
Q Consensus 1120 d~eeR~eILk 1129 (1251)
+.++-..|+.
T Consensus 336 ~~~dL~rILt 345 (443)
T d1g41a_ 336 SAADFERILT 345 (443)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 4999999987
No 30
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.60 E-value=3.8e-14 Score=109.59 Aligned_cols=165 Identities=22% Similarity=0.328 Sum_probs=102.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC---------------
Q ss_conf 88841124839999999999874037825552178888993299995897749999999999919---------------
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG--------------- 1009 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg--------------- 1009 (1251)
...|.+|.|++.+|..|.-.+..+ + ..++||.||||||||++|++++.-+-
T Consensus 3 ~~~f~~I~Gq~~~kral~laa~~~---------~-----~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~ 68 (333)
T d1g8pa_ 3 VFPFSAIVGQEDMKLALLLTAVDP---------G-----IGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNV 68 (333)
T ss_dssp CCCGGGSCSCHHHHHHHHHHHHCG---------G-----GCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSG
T ss_pred CCCHHHCCCCHHHHHHHHHHHHCC---------C-----CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCC
T ss_conf 898514069499999999997646---------9-----97089988998529999999987379821540575346753
Q ss_pred ------------------CCEEEEECCCCCCCCCCCH--HHHH--------HHHHHHHHHCCCCEEEECCCCCCCCCCCC
Q ss_conf ------------------9399995652110014740--8999--------99999988309915998442000147899
Q 000858 1010 ------------------ANFINISMSSITSKWFGEG--EKYV--------KAVFSLASKIAPSVVFVDEVDSMLGRREN 1061 (1251)
Q Consensus 1010 ------------------~pfi~Id~s~L~s~~~Ges--Ek~I--------r~iF~~A~k~~PsIIfIDEID~L~~~r~~ 1061 (1251)
.+++......-.+..+|.. .... ...+..|.. +|+||||++.+ +
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~---gvl~iDEi~~~-----~ 140 (333)
T d1g8pa_ 69 EMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANR---GYLYIDECNLL-----E 140 (333)
T ss_dssp GGSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTT---EEEEETTGGGS-----C
T ss_pred CCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCC---CEEECCCHHHH-----H
T ss_conf 446202201245752123752423677885435574102110236860220253113556---37631537777-----7
Q ss_pred CCHHHHHHHHHHHHHHHC--CCCCCCCCCCEEEEEECCCC-CCCCHHHHHCCCCCCCCCCC-CHHHHHHHHHHH
Q ss_conf 852799999998677640--68855688648999943898-88739998203544247899-978999999999
Q 000858 1062 PGEHEAMRKMKNEFMVNW--DGLRTKDKERVLVLAATNRP-FDLDEAVVRRLPRRLMVNLP-DAPNREKIIRVI 1131 (1251)
Q Consensus 1062 ~~~~~~~~~il~~LL~~l--dgl~~k~~~~VlVIaTTN~p-e~Ld~aLlrRF~~~I~I~lP-d~eeR~eILk~l 1131 (1251)
+..+..+...+.+-...+ .+....-+.++++|+|+|.. ..+.+.+++||+..+.+..| +...|.++....
T Consensus 141 ~~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~ 214 (333)
T d1g8pa_ 141 DHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRR 214 (333)
T ss_dssp HHHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCHHHHHCCEEECCCCCHHHHHHHHHHHH
T ss_conf 99999874453077687513584304888879998457631236631032413344326864035788877765
No 31
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.59 E-value=4.2e-17 Score=129.51 Aligned_cols=165 Identities=15% Similarity=0.101 Sum_probs=107.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHH------HCCCCEEEECCCCCCCC
Q ss_conf 3299995897749999999999919939999565211001-4740899999999988------30991599844200014
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW-FGEGEKYVKAVFSLAS------KIAPSVVFVDEVDSMLG 1057 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~-~GesEk~Ir~iF~~A~------k~~PsIIfIDEID~L~~ 1057 (1251)
+++||+||||||||++|+++|+.++.+|+.+++++..+.+ .+........+|..+. ...|+++++||+|.|.
T Consensus 155 ~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~- 233 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLR- 233 (362)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTH-
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCC-
T ss_conf 7699989999888999999999859978999774201188887577779989999987654106899728875073113-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCC-----CCC-----CCEEEEEECCCCCCCCHHHHH-CCCCCCCCCCCCHHHH-H
Q ss_conf 789985279999999867764068855-----688-----648999943898887399982-0354424789997899-9
Q 000858 1058 RRENPGEHEAMRKMKNEFMVNWDGLRT-----KDK-----ERVLVLAATNRPFDLDEAVVR-RLPRRLMVNLPDAPNR-E 1125 (1251)
Q Consensus 1058 ~r~~~~~~~~~~~il~~LL~~ldgl~~-----k~~-----~~VlVIaTTN~pe~Ld~aLlr-RF~~~I~I~lPd~eeR-~ 1125 (1251)
..++|... +.. ....+|+|||... .+.++. ||+..+.+..|+...| .
T Consensus 234 -------------------~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~--~~~~r~~Rf~~~i~~~~~~~~~~~~ 292 (362)
T d1svma_ 234 -------------------DYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYS--VPKTLQARFVKQIDFRPKDYLKHCL 292 (362)
T ss_dssp -------------------HHHHCSSCEEECCSSSCCEEECCCCEEEEECSCC--CCHHHHTTEEEEEECCCCHHHHHHH
T ss_pred -------------------CCCCCCCHHHHHHHHHCHHHHCCCCCEEECCCCC--CCCCCCCCCCEEEEECCCCCHHHHH
T ss_conf -------------------4568860134442100245531677246506543--0012246673688626897478999
Q ss_pred HHHHHHHHHCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999952226880219999998389959999999999985416999
Q 000858 1126 KIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI 1173 (1251)
Q Consensus 1126 eILk~ll~k~~l~~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~~airri 1173 (1251)
+++..++++..+. .+...++..+.+++++|+..+++.++....+++
T Consensus 293 ~~l~~i~~~~~l~--~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l 338 (362)
T d1svma_ 293 ERSEFLLEKRIIQ--SGIALLLMLIWYRPVAEFAQSIQSRIVEWKERL 338 (362)
T ss_dssp HTCTHHHHTTCTT--CHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCC--CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999984035788--888999987368987999999999999999987
No 32
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.57 E-value=1.4e-14 Score=112.43 Aligned_cols=181 Identities=19% Similarity=0.289 Sum_probs=118.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHC----------------CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 1248399999999998740378255521----------------788889932999958977499999999999199399
Q 000858 950 DIGALENVKDTLKELVMLPLQRPELFCK----------------GQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1251)
Q Consensus 950 dI~Gle~vk~~L~e~I~~pl~rpelf~k----------------~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi 1013 (1251)
.|+|++++++.+-.++....+|...-.+ .....|+.++||.||+|+|||.+|+++|..++.+|+
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~i 97 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIA 97 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEE
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 62380899999999999899888778876404444331111223345678753244189986378999999864435331
Q ss_pred EEECCCCCC-CCCCCH-HHHHHHHHHHH----HHCCCCEEEECCCCCCCCCCCCCC--HHHHHHHHHHHHHHHCCCCCC-
Q ss_conf 995652110-014740-89999999998----830991599844200014789985--279999999867764068855-
Q 000858 1014 NISMSSITS-KWFGEG-EKYVKAVFSLA----SKIAPSVVFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRT- 1084 (1251)
Q Consensus 1014 ~Id~s~L~s-~~~Ges-Ek~Ir~iF~~A----~k~~PsIIfIDEID~L~~~r~~~~--~~~~~~~il~~LL~~ldgl~~- 1084 (1251)
.++++++.. .|.|.. +..+..+...+ .+.+.+|+++||+|...+...... .......+.+.|+..+++-..
T Consensus 98 r~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~ 177 (364)
T d1um8a_ 98 ISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVN 177 (364)
T ss_dssp EEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC
T ss_pred EHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEC
T ss_conf 11222014431667631210344542024589986546301016665313454455551221438898645540586122
Q ss_pred --------CCCCCEEEEEECCC-------------------------------------------------CCCCCHHHH
Q ss_conf --------68864899994389-------------------------------------------------888739998
Q 000858 1085 --------KDKERVLVLAATNR-------------------------------------------------PFDLDEAVV 1107 (1251)
Q Consensus 1085 --------k~~~~VlVIaTTN~-------------------------------------------------pe~Ld~aLl 1107 (1251)
....+.+++.|+|- +..+.|.|+
T Consensus 178 ~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~ 257 (364)
T d1um8a_ 178 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELI 257 (364)
T ss_dssp ---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHH
T ss_pred CCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 58777876776416899611345541113101456654301445431000110012466653024578776530079999
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 20354424789997899999999
Q 000858 1108 RRLPRRLMVNLPDAPNREKIIRV 1130 (1251)
Q Consensus 1108 rRF~~~I~I~lPd~eeR~eILk~ 1130 (1251)
.||+.++.|...+.++-.+|+..
T Consensus 258 gRi~~iv~f~~L~~~~l~~Il~~ 280 (364)
T d1um8a_ 258 GRLPVLSTLDSISLEAMVDILQK 280 (364)
T ss_dssp TTCCEEEECCCCCHHHHHHHHHS
T ss_pred HHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 87230155740209999999987
No 33
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.56 E-value=7.5e-15 Score=114.35 Aligned_cols=157 Identities=22% Similarity=0.394 Sum_probs=116.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----------CCCEEEEE
Q ss_conf 84112483999999999987403782555217888899329999589774999999999991----------99399995
Q 000858 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINIS 1016 (1251)
Q Consensus 947 tfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el----------g~pfi~Id 1016 (1251)
.++.++|.++..+.+.+.+.. +..+++||.||||+|||.++..+|... +..++.++
T Consensus 20 ~ld~~igRd~Ei~~l~~iL~r--------------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld 85 (195)
T d1jbka_ 20 KLDPVIGRDEEIRRTIQVLQR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 85 (195)
T ss_dssp CSCCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHC--------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEE
T ss_conf 999872809999999999953--------------588873998358754479999999999808999788185699966
Q ss_pred CCCCCC--CCCCCHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 652110--014740899999999988309-91599844200014789985279999999867764068855688648999
Q 000858 1017 MSSITS--KWFGEGEKYVKAVFSLASKIA-PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVL 1093 (1251)
Q Consensus 1017 ~s~L~s--~~~GesEk~Ir~iF~~A~k~~-PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVI 1093 (1251)
.+.+.. .+.|+.|..+..++..+.+.. ..||||||++.|++.....+.... ..++...+. +..+.+|
T Consensus 86 ~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~-~~~Lkp~L~---------rg~l~~I 155 (195)
T d1jbka_ 86 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA-GNMLKPALA---------RGELHCV 155 (195)
T ss_dssp HHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCC-HHHHHHHHH---------TTSCCEE
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCH-HHHHHHHHH---------CCCCEEE
T ss_conf 999864587407799999999998731798089972608998437877775238-999999985---------7995498
Q ss_pred EECCC-----CCCCCHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 94389-----888739998203544247899978999999
Q 000858 1094 AATNR-----PFDLDEAVVRRLPRRLMVNLPDAPNREKII 1128 (1251)
Q Consensus 1094 aTTN~-----pe~Ld~aLlrRF~~~I~I~lPd~eeR~eIL 1128 (1251)
++|.. ...-|+++.+|| ..|.+..|+.++-..|+
T Consensus 156 gatT~eey~~~~e~d~aL~rrF-~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 156 GATTLDEYRQYIEKDAALERRF-QKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp EEECHHHHHHHTTTCHHHHTTE-EEEECCCCCHHHHHTTC
T ss_pred ECCCHHHHHHHHHCCHHHHHCC-CEEECCCCCHHHHHHHH
T ss_conf 5189999999987388999639-87545898989999985
No 34
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.54 E-value=1.8e-12 Score=98.39 Aligned_cols=192 Identities=19% Similarity=0.252 Sum_probs=121.7
Q ss_pred CCCCCCC-CC--CHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 8884112-48--3999999999987403782555217888899329999589774999999999991---9939999565
Q 000858 945 GVTFDDI-GA--LENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1251)
Q Consensus 945 ~vtfddI-~G--le~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s 1018 (1251)
..+|+++ +| ...+...++..+..+- ...+.++|+||+|+|||+|+.|+++++ +..++.+++.
T Consensus 6 ~~tFdnF~vg~~N~~a~~~~~~~~~~~~------------~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~ 73 (213)
T d1l8qa2 6 KYTLENFIVGEGNRLAYEVVKEALENLG------------SLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSAD 73 (213)
T ss_dssp TCCSSSCCCCTTTHHHHHHHHHHHHTTT------------TSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CCCHHHCCCCCCHHHHHHHHHHHHHCCC------------CCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECHH
T ss_conf 8976531377749999999999986768------------7788579988899839999999998744676504884437
Q ss_pred CCCCCCCCCHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 211001474089-9999999988309915998442000147899852799999998677640688556886489999438
Q 000858 1019 SITSKWFGEGEK-YVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1251)
Q Consensus 1019 ~L~s~~~GesEk-~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN 1097 (1251)
.+.......... ....++.. .. ...+|+|||||.+.++. ..+.....+++.+.. ..+.+|+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~-~~dll~iDDi~~i~~~~---~~~~~lf~lin~~~~---------~~~~iiits~~ 139 (213)
T d1l8qa2 74 DFAQAMVEHLKKGTINEFRNM-YK-SVDLLLLDDVQFLSGKE---RTQIEFFHIFNTLYL---------LEKQIILASDR 139 (213)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH-HH-TCSEEEEECGGGGTTCH---HHHHHHHHHHHHHHH---------TTCEEEEEESS
T ss_pred HHHHHHHHHHHCCCHHHHHHH-HH-HCCCHHHHHHHHHCCCH---HHHHHHHHHHHHHHH---------CCCEEEEECCC
T ss_conf 879999999871662667898-76-21301011265505865---778899999998763---------16638995487
Q ss_pred CCCCC---CHHHHHCCCC--CCCCCCCCHHHHHHHHHHHHHHCCCC-CHHCHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 98887---3999820354--42478999789999999999522268-802199999983899599999999999
Q 000858 1098 RPFDL---DEAVVRRLPR--RLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTA 1165 (1251)
Q Consensus 1098 ~pe~L---d~aLlrRF~~--~I~I~lPd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~T~Gysg~DLk~Lv~~A 1165 (1251)
.|..+ .+.+.+|+.. ++.++ |+.++|.+|++.++....+. ++..++.|+..+. +.++|..+++.-
T Consensus 140 ~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l~~l 210 (213)
T d1l8qa2 140 HPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKIKLI 210 (213)
T ss_dssp CGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHHHHH
T ss_pred CCHHCCCCCHHHHHHHHCCEEEEEC-CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC--CHHHHHHHHHHH
T ss_conf 5100134326788886185689978-8827999999999998299999999999998568--699899999986
No 35
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.49 E-value=6.5e-12 Score=94.58 Aligned_cols=169 Identities=16% Similarity=0.142 Sum_probs=113.1
Q ss_pred CCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC-----------------------
Q ss_conf 839999999999874037825552178888993299995897749999999999919-----------------------
Q 000858 953 ALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG----------------------- 1009 (1251)
Q Consensus 953 Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg----------------------- 1009 (1251)
.++.+.+.|...+.. .+.++++||+||+|+|||++|+.+|+.+-
T Consensus 6 w~~~~~~~l~~~~~~-------------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~ 72 (207)
T d1a5ta2 6 WLRPDFEKLVASYQA-------------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 (207)
T ss_dssp GGHHHHHHHHHHHHT-------------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHC-------------CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 219999999999985-------------9967379888999875999999999821010123212233420155654303
Q ss_pred -CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH----CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf -93999956521100147408999999999883----0991599844200014789985279999999867764068855
Q 000858 1010 -ANFINISMSSITSKWFGEGEKYVKAVFSLASK----IAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT 1084 (1251)
Q Consensus 1010 -~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k----~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~ 1084 (1251)
..++.+....- .. ...-..++.+...+.. ....|++|||+|.+- ....+.++..++..
T Consensus 73 ~~~~~~~~~~~~-~~--~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~------------~~a~n~Llk~lEep-- 135 (207)
T d1a5ta2 73 HPDYYTLAPEKG-KN--TLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT------------DAAANALLKTLEEP-- 135 (207)
T ss_dssp CTTEEEECCCTT-CS--SBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBC------------HHHHHHHHHHHTSC--
T ss_pred CCCCCHHHHHHC-CC--CCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHH------------HHHHHHHHHHHHHH--
T ss_conf 431101234313-45--33321146776532110035764047731344200------------00149999999850--
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHCCCCCHHHH
Q ss_conf 68864899994389888739998203544247899978999999999952226880219999998389959999
Q 000858 1085 KDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDL 1158 (1251)
Q Consensus 1085 k~~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~~dvdl~~LA~~T~Gysg~DL 1158 (1251)
+.++++|++|+.+..+.+++++|+ ..+.|+.|+.++...+++.. ...++..+..++..++|-.+..|
T Consensus 136 --~~~~~fIl~t~~~~~ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~----~~~~~~~~~~i~~~s~Gs~r~al 202 (207)
T d1a5ta2 136 --PAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSRE----VTMSQDALLAALRLSAGSPGAAL 202 (207)
T ss_dssp --CTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHH----CCCCHHHHHHHHHHTTTCHHHHH
T ss_pred --CCCCEEEEEECCHHHHHHHHCCEE-EEEECCCCCHHHHHHHHHHC----CCCCHHHHHHHHHHCCCCHHHHH
T ss_conf --111104553068655103200215-78826899999999999974----89999999999997699999999
No 36
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.39 E-value=1.2e-12 Score=99.54 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=76.1
Q ss_pred CCCEECCCCC--CCCCEEEEC--CEEEECCCCCCCEEECCCCCCCCCEEEEEEEC-----------CCCCEEEEEEECCC
Q ss_conf 6300012367--897525644--53687047852125249988755318998205-----------99652999984387
Q 000858 133 PWARLISQCS--QNSHLSMTG--AVFTVGHNRQCDLYLKDPSISKNLCRLRRIEN-----------GGPSGALLEITGGK 197 (1251)
Q Consensus 133 pW~rL~s~~~--~~p~~~i~~--~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~-----------~g~~~a~le~~~~~ 197 (1251)
-|-.|.+... ...++.|.. ..|+|||+..||+.++++.+|..||.|..... .+...+||+|.|+|
T Consensus 4 ~f~~L~~l~~~~~~~~i~i~~~~~~~~iGR~~~~d~~i~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~~l~D~S~N 83 (158)
T d1dmza_ 4 RFLTLKPLPDSIIQESLEIQQGVNPFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTN 83 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCSCEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEECSTT
T ss_pred EEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 16999981698753069971699767966886766897987626761699995166642001234467873899856889
Q ss_pred CEEEECCEECCCCCEEEEECCCEEEECCC
Q ss_conf 44998695508986387007988998138
Q 000858 198 GEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1251)
Q Consensus 198 G~v~vNg~~~~k~~~~~L~~gdev~f~~~ 226 (1251)
|| +|||++++|+.++.|++||+|.|...
T Consensus 84 Gt-~vN~~~~~~~~~~~l~~gD~i~~~~~ 111 (158)
T d1dmza_ 84 VS-YLNNNRMIQGTKFLLQDGDEIKIIWD 111 (158)
T ss_dssp CC-EETTEECCSSEEEECCSSCCEESCCC
T ss_pred CE-EECCEECCCCCEEECCCCCEEEECCC
T ss_conf 80-89999937896088889999999248
No 37
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.38 E-value=3.5e-12 Score=96.37 Aligned_cols=98 Identities=24% Similarity=0.303 Sum_probs=79.7
Q ss_pred CCCEECCCCCCCCCEEEE-------------CCEEEECCCCCCCEEECC-CCCCCCCEEEEEEECCCCCEEEEEEECCCC
Q ss_conf 630001236789752564-------------453687047852125249-988755318998205996529999843874
Q 000858 133 PWARLISQCSQNSHLSMT-------------GAVFTVGHNRQCDLYLKD-PSISKNLCRLRRIENGGPSGALLEITGGKG 198 (1251)
Q Consensus 133 pW~rL~s~~~~~p~~~i~-------------~~~~t~G~~~~cd~~l~d-~~~s~~~c~l~~~~~~g~~~a~le~~~~~G 198 (1251)
--|||+....++|...+. +..|+|||+..||+.+.| +.+|..||+|... .++. .++++.|+||
T Consensus 4 ~~~~l~~t~g~~p~~~L~~~~~~~~~~~~~~~~~~~iGR~~~~d~~l~d~~~VSr~Ha~i~~~-~~~~--~~~d~~S~NG 80 (127)
T d1g6ga_ 4 IVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLG-EDGN--LLLNDISTNG 80 (127)
T ss_dssp EEEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEEC-TTSC--EEEEECCSSC
T ss_pred EEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHEEEC-CCEE--EEEECCCCCE
T ss_conf 489998617988718899627740577862883389736844671689951450999870301-6479--9999999660
Q ss_pred EEEECCEECCCCCEEEEECCCEEEECCCC---CEEEEEE
Q ss_conf 49986955089863870079889981389---7147964
Q 000858 199 EVEVNGNVHPKDSQVVLRGGDELVFSPSG---KHSYIFQ 234 (1251)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gdev~f~~~~---~~ayifq 234 (1251)
| +|||..+.++..++|++||+|.|+... -..|+++
T Consensus 81 T-~vNg~~l~~~~~~~L~~GD~I~iG~~~~~~~v~~~~~ 118 (127)
T d1g6ga_ 81 T-WLNGQKVEKNSNQLLSQGDEITVGVGVESDILSLVIF 118 (127)
T ss_dssp C-EETTEECCTTCCEECCTTCEEEECTTSGGGCEEEEEE
T ss_pred E-EECCEEECCCCEEECCCCCEEEECCCCCCCEEEEEEE
T ss_conf 4-7998894599878938999999798887766999999
No 38
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.32 E-value=5.4e-12 Score=95.10 Aligned_cols=196 Identities=19% Similarity=0.232 Sum_probs=105.1
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCCCC---
Q ss_conf 2483999999999987403782555217888899329999589774999999999991---9939999565211001---
Q 000858 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSKW--- 1024 (1251)
Q Consensus 951 I~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s~~--- 1024 (1251)
++|.....+.+.+.+.. . ......|||+|++||||+.+|++|.... ..+++.++|..+....
T Consensus 2 ~v~~S~~~~~~~~~~~~----------~--a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~ 69 (247)
T d1ny5a2 2 YVFESPKMKEILEKIKK----------I--SCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEA 69 (247)
T ss_dssp CCCCSHHHHHHHHHHHH----------H--TTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHH
T ss_pred EEECCHHHHHHHHHHHH----------H--HCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 58629999999999999----------9--68899789989998179999999999658765332021023431011288
Q ss_pred --CCCH-------HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH-HCCCCCCCCCCCEEEEE
Q ss_conf --4740-------8999999999883099159984420001478998527999999986776-40688556886489999
Q 000858 1025 --FGEG-------EKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV-NWDGLRTKDKERVLVLA 1094 (1251)
Q Consensus 1025 --~Ges-------Ek~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~-~ldgl~~k~~~~VlVIa 1094 (1251)
+|.. ......+|+.|.. ++|||||||.| +...+.....++..-.. .+.+.. ....++.+|+
T Consensus 70 ~lfg~~~~~~~~~~~~~~g~l~~a~g---GtL~l~~i~~L-----~~~~Q~~L~~~l~~~~~~~~~~~~-~~~~~~RlI~ 140 (247)
T d1ny5a2 70 ELFGYEKGAFTGAVSSKEGFFELADG---GTLFLDEIGEL-----SLEAQAKLLRVIESGKFYRLGGRK-EIEVNVRILA 140 (247)
T ss_dssp HHHCBCTTSSTTCCSCBCCHHHHTTT---SEEEEESGGGC-----CHHHHHHHHHHHHHSEECCBTCCS-BEECCCEEEE
T ss_pred HHCCCCCCCCCCCCCCCCCHHHCCCC---CEEEEECHHHC-----CHHHHHHHHHHHHHCCEEECCCCC-CEECCEEEEE
T ss_conf 76285357767753355888772389---97999583759-----999999999999759878789997-0233759999
Q ss_pred ECCCC-------CCCCHHHHHCCCCCCCCCCCCHHHHH----HHHHHHHHHCC----CC-CHHCHHHHHHHCC-CC--CH
Q ss_conf 43898-------88739998203544247899978999----99999995222----68-8021999999838-99--59
Q 000858 1095 ATNRP-------FDLDEAVVRRLPRRLMVNLPDAPNRE----KIIRVILAKEE----LA-SDVDLEGIANMAD-GY--SG 1155 (1251)
Q Consensus 1095 TTN~p-------e~Ld~aLlrRF~~~I~I~lPd~eeR~----eILk~ll~k~~----l~-~dvdl~~LA~~T~-Gy--sg 1155 (1251)
+|+.+ ..+.+.++.|+. .+.+.+|...+|. .|++.++.+.. .. ..+.-..+..... .+ +.
T Consensus 141 ~s~~~l~~l~~~~~f~~~L~~~l~-~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl 219 (247)
T d1ny5a2 141 ATNRNIKELVKEGKFREDLYYRLG-VIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNV 219 (247)
T ss_dssp EESSCHHHHHHTTSSCHHHHHHHT-TEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHH
T ss_pred ECCCCHHHHHHCCCCCHHHHHHCC-EEEECCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHH
T ss_conf 339799999885997488886408-1065589701162457664001343346650787788899999999848999899
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999854
Q 000858 1156 SDLKNLCVTAAHC 1168 (1251)
Q Consensus 1156 ~DLk~Lv~~Aa~~ 1168 (1251)
.+|+++++.|+..
T Consensus 220 ~EL~~~l~~a~~~ 232 (247)
T d1ny5a2 220 RELKNVIERAVLF 232 (247)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999981
No 39
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=3.2e-11 Score=89.89 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=72.5
Q ss_pred CEECCCC--CCCCCEEEE--CCEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCEECCCC
Q ss_conf 0001236--789752564--453687047852125249988755318998205996529999843874499869550898
Q 000858 135 ARLISQC--SQNSHLSMT--GAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGGKGEVEVNGNVHPKD 210 (1251)
Q Consensus 135 ~rL~s~~--~~~p~~~i~--~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~v~vNg~~~~k~ 210 (1251)
||||=++ .+.|.+.+. ...++|||+..|+ +.|+.+|..||+|+....++. +++++.|+||| +|||+++.|+
T Consensus 1 grl~l~~p~g~~p~i~l~~~~~~~~iGR~~~~~--i~d~~vSr~Ha~i~~~~~~~~--~~v~~~s~Ngt-~vNg~~l~~~ 75 (101)
T d2brfa1 1 GRLWLESPPGEAPPIFLPSDGQALVLGRGPLTQ--VTDRKCSRTQVELVADPETRT--VAVKQLGVNPS-TTGTQELKPG 75 (101)
T ss_dssp CEEEEECSTTSSCCEECCSTTCCEEECSBTTTT--BCCTTSCSSCEEEEEETTTTE--EEEEECSSSCC-EEC-CBCCTT
T ss_pred CEEEEEECCCCCCCEEEECCCCEEECCCCCCCC--CCCCCCCHHHEEEEECCCCEE--EEEECCCCCCE-EEEEEEECCC
T ss_conf 909999369899868984699769716675565--337881942669985367406--99983777550-8999992255
Q ss_pred CEEEEECCCEEEECCCCCEEEEE
Q ss_conf 63870079889981389714796
Q 000858 211 SQVVLRGGDELVFSPSGKHSYIF 233 (1251)
Q Consensus 211 ~~~~L~~gdev~f~~~~~~ayif 233 (1251)
+.+.|++||+|.++ .+++-|+.
T Consensus 76 ~~~~L~~GD~i~l~-~~~~~y~v 97 (101)
T d2brfa1 76 LEGSLGVGDTLYLV-NGLHPLTL 97 (101)
T ss_dssp CEEEEETTCEEEEE-TTEEEEEE
T ss_pred EEEECCCCCEEEEC-CCEEEEEE
T ss_conf 06599999999995-88088999
No 40
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=8.1e-11 Score=87.19 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=79.8
Q ss_pred CCCEECCCCCCCCCEEEE-CCEEEECCCCCCCEEECCCC----CCCCCEEEEEEECCCCCEEEEEEE-CCCCEEEECCEE
Q ss_conf 630001236789752564-45368704785212524998----875531899820599652999984-387449986955
Q 000858 133 PWARLISQCSQNSHLSMT-GAVFTVGHNRQCDLYLKDPS----ISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNV 206 (1251)
Q Consensus 133 pW~rL~s~~~~~p~~~i~-~~~~t~G~~~~cd~~l~d~~----~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~ 206 (1251)
+|+ |.........+.+. +..+||||+..||+.|+++. ||..||+|...+ .|. .+|.|. |+||| +|||..
T Consensus 5 ~w~-L~r~g~~~~~~~l~~~~~~tiGR~~~~~~~l~~~~~~~~VSR~Ha~i~~~~-~g~--~~l~D~~S~NGt-~lNg~~ 79 (127)
T d2piea1 5 SWC-LRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNP-EGQ--WTIMDNKSLNGV-WLNRAR 79 (127)
T ss_dssp EEE-EEETTCSSCBEEECTTCCEEEESSSSSSEECCCSSCTTSSCSSCEEEEECT-TSC--EEEEECSCSSCE-EETTEE
T ss_pred EEE-EEECCCCCCEEECCCCCEEEECCCCCCCEEECCCCCCCCCCHHHEEEEECC-CCE--EEEEECCCCCCE-EECCEE
T ss_conf 489-999269988488578998875367876589789975661662361899979-985--999987773772-799999
Q ss_pred CCCCCEEEEECCCEEEECCC----CCEEEEEEECCCC
Q ss_conf 08986387007988998138----9714796404756
Q 000858 207 HPKDSQVVLRGGDELVFSPS----GKHSYIFQQLSDD 239 (1251)
Q Consensus 207 ~~k~~~~~L~~gdev~f~~~----~~~ayifq~l~~~ 239 (1251)
+.+++.+.|+.||.|.|+.+ -+..|.|+.+..+
T Consensus 80 l~~~~~~~L~~GD~I~iG~p~~~~~~~~f~~~~~~~~ 116 (127)
T d2piea1 80 LEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEED 116 (127)
T ss_dssp CCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEEEEE
T ss_pred CCCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCC
T ss_conf 4699306947999999588887776447999957320
No 41
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.14 E-value=4.1e-10 Score=82.46 Aligned_cols=92 Identities=20% Similarity=0.278 Sum_probs=73.4
Q ss_pred CCCCEECCCCCCCCCEEEECCEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEE-CCCCEEEECCEECCCC
Q ss_conf 863000123678975256445368704785212524998875531899820599652999984-3874499869550898
Q 000858 132 IPWARLISQCSQNSHLSMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPKD 210 (1251)
Q Consensus 132 ~pW~rL~s~~~~~p~~~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k~ 210 (1251)
.+++.|....+. ...++....++|||+..||+.++|+.+|..||+|... ++. .+|+|. |.||| +|||.++.+
T Consensus 4 ~~~~~l~~~~~G-~~~~l~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGt-~vNg~~i~~- 76 (99)
T d2ff4a3 4 QAVAYLHDIASG-RGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDT--GTN--YVINDLRSSNGV-HVQHERIRS- 76 (99)
T ss_dssp BCCCEEEETTTC-CEEECCSSEEEEESSTTSSEECCCTTSCTTCEEEEEC--SSC--EEEEECSCSSCC-EETTEECSS-
T ss_pred CCEEEEECCCCC-CEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEEE--CCE--EEEEECCCCCCC-EECCEECCC-
T ss_conf 547998707998-7999899888981476899998896626036999975--998--999999985887-699999488-
Q ss_pred CEEEEECCCEEEECCCCCEEEEEE
Q ss_conf 638700798899813897147964
Q 000858 211 SQVVLRGGDELVFSPSGKHSYIFQ 234 (1251)
Q Consensus 211 ~~~~L~~gdev~f~~~~~~ayifq 234 (1251)
.++|+.||+|.|+ ...+.|+
T Consensus 77 -~~~L~~Gd~i~iG---~~~~~f~ 96 (99)
T d2ff4a3 77 -AVTLNDGDHIRIC---DHEFTFQ 96 (99)
T ss_dssp -EEEECTTCEEEET---TEEEEEE
T ss_pred -CEECCCCCEEEEC---CEEEEEE
T ss_conf -5699999999999---9999999
No 42
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.13 E-value=5.1e-12 Score=95.29 Aligned_cols=68 Identities=32% Similarity=0.431 Sum_probs=51.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 884112483999999999987403782555217888899329999589774999999999991993999956521100
Q 000858 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK 1023 (1251)
Q Consensus 946 vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~ 1023 (1251)
++|++..+.+.....+.+.... ... ...|++|||+||||||||++|++||.+++.+|+.+++.++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~ 71 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQG---------KKA-VESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQ 71 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTT---------CCC-CSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHC---------CCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHH
T ss_conf 6557699999999999999841---------527-8999799988979988999999999986515489832899998
No 43
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.08 E-value=3.6e-10 Score=82.80 Aligned_cols=81 Identities=23% Similarity=0.350 Sum_probs=66.1
Q ss_pred EEEE-CCEEEECCC-CCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEE-CCCCEEEECCEECCCCCEEEEECCCEEEE
Q ss_conf 2564-453687047-85212524998875531899820599652999984-38744998695508986387007988998
Q 000858 147 LSMT-GAVFTVGHN-RQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1251)
Q Consensus 147 ~~i~-~~~~t~G~~-~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k~~~~~L~~gdev~f 223 (1251)
+.+. ...|+|||+ ..||++++|+.+|..||+|... ++. .+|+|. |.||| +|||.++..++.++|++||+|.|
T Consensus 27 ~~l~~~~~~~iGR~~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGT-~vng~~l~~~~~~~L~~Gd~i~l 101 (118)
T d1uhta_ 27 LDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SGN--WVIQDLGSSNGT-LLNSNALDPETSVNLGDGDVIKL 101 (118)
T ss_dssp CCBCTTCCEEEESSSTTCSEECCSSSSCTTCEEEEEC--SSS--EEEECCCCSSCC-EESSSBCCTTCEEECCTTEEEEE
T ss_pred EEECCCCEEEECCCCCCCEEEECCCCCCHHEEEEEEE--CCE--EEEEECCCCCEE-EECCEECCCCCEEECCCCCEEEE
T ss_conf 9968999799799776881996962765130399997--998--999988985434-79999948996789999999999
Q ss_pred CCCCCEEEEEEE
Q ss_conf 138971479640
Q 000858 224 SPSGKHSYIFQQ 235 (1251)
Q Consensus 224 ~~~~~~ayifq~ 235 (1251)
+.. .++|-.
T Consensus 102 G~~---~~~~v~ 110 (118)
T d1uhta_ 102 GEY---TSILVN 110 (118)
T ss_dssp TTT---EEEEEE
T ss_pred CCE---EEEEEE
T ss_conf 999---999998
No 44
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=1.2e-09 Score=79.35 Aligned_cols=83 Identities=24% Similarity=0.465 Sum_probs=69.8
Q ss_pred CCCCEEEECCEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCC-CEEEECCEECCCCCEEEEECCCEE
Q ss_conf 8975256445368704785212524998875531899820599652999984387-449986955089863870079889
Q 000858 143 QNSHLSMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGGK-GEVEVNGNVHPKDSQVVLRGGDEL 221 (1251)
Q Consensus 143 ~~p~~~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~~-G~v~vNg~~~~k~~~~~L~~gdev 221 (1251)
+-+..++....++|||+..||+.|+|+.||..||+|.... +. ++|++.++. |+ +|||+.+.+ .++|..||+|
T Consensus 14 ~g~~~~L~~~~~~IGr~~~~di~l~~~~is~~Ha~i~~~~--~~--~~i~d~~s~ng~-~vNg~~l~~--~~~L~~Gd~I 86 (98)
T d2affa1 14 DGPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHE--QE--AILHNFSSTNPT-QVNGSVIDE--PVRLKHGDVI 86 (98)
T ss_dssp EEEEEECCSSEEEEESSTTSSEEECCTTSCSSBEEEEECS--SC--EEEEECCSSSCC-EETTEECSS--CEEECTTCEE
T ss_pred CCEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEEEC--CE--EEEEECCCCCCC-EECCEECCC--CEECCCCCEE
T ss_conf 8619997998889801878989958988271039999958--98--999989976441-699999888--4698999899
Q ss_pred EECCCCCEEEEEEE
Q ss_conf 98138971479640
Q 000858 222 VFSPSGKHSYIFQQ 235 (1251)
Q Consensus 222 ~f~~~~~~ayifq~ 235 (1251)
.|+ +..|.|++
T Consensus 87 ~iG---~~~~~fe~ 97 (98)
T d2affa1 87 TII---DRSFRYEN 97 (98)
T ss_dssp EET---TEEEEEEE
T ss_pred EEC---CEEEEEEE
T ss_conf 999---99999973
No 45
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.03 E-value=3.8e-07 Score=62.49 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=113.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf 88411248399999999998740378255521788889932999958977499999999999199399995652110014
Q 000858 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1251)
Q Consensus 946 vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~ 1025 (1251)
..-+++.|.++..+.|.+. ..+.++|+||+|+|||+|++.++...+..+..+++........
T Consensus 9 ~~~~~f~GR~~el~~l~~~------------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~ 70 (283)
T d2fnaa2 9 DNRKDFFDREKEIEKLKGL------------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNY 70 (283)
T ss_dssp CSGGGSCCCHHHHHHHHHT------------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSC
T ss_pred CCHHHCCCHHHHHHHHHHC------------------CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 9722078969999999840------------------5987999869998299999999997799869997214533332
Q ss_pred CCHH----------------------------------------------HHHHHHHHHHH--HCCCCEEEECCCCCCCC
Q ss_conf 7408----------------------------------------------99999999988--30991599844200014
Q 000858 1026 GEGE----------------------------------------------KYVKAVFSLAS--KIAPSVVFVDEVDSMLG 1057 (1251)
Q Consensus 1026 GesE----------------------------------------------k~Ir~iF~~A~--k~~PsIIfIDEID~L~~ 1057 (1251)
.... ..+..++.... ...+.+|++|+++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~ 150 (283)
T d2fnaa2 71 ISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVK 150 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC
T ss_conf 43999999999975445555577777777530334344322234100134589999999876315555456640554133
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC---------CHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 789985279999999867764068855688648999943898887---------39998203544247899978999999
Q 000858 1058 RRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDL---------DEAVVRRLPRRLMVNLPDAPNREKII 1128 (1251)
Q Consensus 1058 ~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~L---------d~aLlrRF~~~I~I~lPd~eeR~eIL 1128 (1251)
.... .... .+...... ..++..+.++.....+ ...+..|+...+.++..+.++..+++
T Consensus 151 ~~~~-~~~~----~l~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l 217 (283)
T d2fnaa2 151 LRGV-NLLP----ALAYAYDN--------LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFL 217 (283)
T ss_dssp CTTC-CCHH----HHHHHHHH--------CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHH
T ss_pred CCHH-HHHH----HHHHHHHH--------HHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHH
T ss_conf 3269-9999----99999875--------311344203565067899997542100010341058862887889999999
Q ss_pred HHHHHHCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 999952226880219999998389959999999999985
Q 000858 1129 RVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAH 1167 (1251)
Q Consensus 1129 k~ll~k~~l~~dvdl~~LA~~T~Gysg~DLk~Lv~~Aa~ 1167 (1251)
...+....+.. .+++.+...+.|. +..|..++..+..
T Consensus 218 ~~~~~~~~~~~-~~~~~i~~~~~G~-P~~L~~~~~~~~~ 254 (283)
T d2fnaa2 218 RRGFQEADIDF-KDYEVVYEKIGGI-PGWLTYFGFIYLD 254 (283)
T ss_dssp HHHHHHHTCCC-CCHHHHHHHHCSC-HHHHHHHHHHHHH
T ss_pred HHHHHHCCCCH-HHHHHHHHHHCCC-HHHHHHHHHHHHH
T ss_conf 96654569999-9999999996997-9999999999980
No 46
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.02 E-value=4.4e-11 Score=88.98 Aligned_cols=55 Identities=31% Similarity=0.443 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCHHHHHCC-------CHHHHHHHHHHHHCCCC---CEEEEEECCC
Q ss_conf 8999999986103789869997470334115-------93368999998713999---8899962257
Q 000858 689 AINELFEVALNESKSSPLIVFVKDIEKSLTG-------NNDAYGALKSKLENLPS---NVVVIGSHTQ 746 (1251)
Q Consensus 689 ~~~~l~evl~ses~~~P~Ilfi~Dve~~l~~-------~~~~~~~l~~~L~~L~g---~VivIgs~~~ 746 (1251)
.++.+|+.+.. .+|.||||+|+|+++.. .......+...++.+.. +|+|||+||+
T Consensus 88 ~i~~if~~A~~---~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~ 152 (246)
T d1d2na_ 88 AMKKIFDDAYK---SQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSR 152 (246)
T ss_dssp HHHHHHHHHHT---SSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESC
T ss_pred HHHHHHHHHHH---CCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf 44445655553---242223310256676513454412478999999986077765450145532488
No 47
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.01 E-value=6.8e-10 Score=80.98 Aligned_cols=73 Identities=21% Similarity=0.169 Sum_probs=62.4
Q ss_pred EEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEE-CCCCEEEECCEECCC--------CCEEEEECCCEEEE
Q ss_conf 368704785212524998875531899820599652999984-387449986955089--------86387007988998
Q 000858 153 VFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPK--------DSQVVLRGGDELVF 223 (1251)
Q Consensus 153 ~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k--------~~~~~L~~gdev~f 223 (1251)
.++|||+..||+.|+|+.+|..||+|......+. .+++|. |+||| +|||.++.+ +..+.|+.||+|.|
T Consensus 31 ~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~~~~--~~v~DlgS~nGT-~vNg~~i~~~~~~~~~~g~~~~L~~gd~i~i 107 (122)
T d1mzka_ 31 PVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFK--WELVDMGSLNGT-LVNSHSISHPDLGSRKWGNPVELASDDIITL 107 (122)
T ss_dssp SEEEESSSSCSEECCCTTSSSEEEEEEEETTTTE--EEEEETTCSSCC-EETTEESSCCCTTTCCCCCCEECCTTEEEEC
T ss_pred CEEECCCCCCCEEECCCCCCCCCEEEEEECCCCE--EEEEECCCCCCE-EECCEECCCCCCCCCCCCCEEECCCCCEEEE
T ss_conf 7995589898899889886733259999689897--999528987745-9999997454345456896588689999998
Q ss_pred CCCCC
Q ss_conf 13897
Q 000858 224 SPSGK 228 (1251)
Q Consensus 224 ~~~~~ 228 (1251)
+...+
T Consensus 108 G~~~~ 112 (122)
T d1mzka_ 108 GTTTK 112 (122)
T ss_dssp SSSCE
T ss_pred CCEEE
T ss_conf 99289
No 48
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.00 E-value=4.1e-09 Score=75.70 Aligned_cols=117 Identities=16% Similarity=0.224 Sum_probs=85.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC----CCEEEECCC
Q ss_conf 993299995897749999999999919------9399995652110014740899999999988309----915998442
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAG------ANFINISMSSITSKWFGEGEKYVKAVFSLASKIA----PSVVFVDEV 1052 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg------~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~~----PsIIfIDEI 1052 (1251)
.+.++||+||+|+|||.+|..++.+.. ..|+.+.... ..+ .-..++.+...+...+ .-|++|||+
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I--~Id~IR~i~~~~~~~~~~~~~KviIId~a 88 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENI--GIDDIRTIKDFLNYSPELYTRKYVIVHDC 88 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCB--CHHHHHHHHHHHTSCCSSSSSEEEEETTG
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC---CCC--CHHHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 9855998898998889999999999843456799889980776---789--98999999999961754589879999473
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCH
Q ss_conf 000147899852799999998677640688556886489999438988873999820354424789997
Q 000858 1053 DSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDA 1121 (1251)
Q Consensus 1053 D~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~ 1121 (1251)
|.| + ....+.|+..++.. +..+++|.+|+.++.+.+++++|+ ..+.++.|..
T Consensus 89 d~l-----~-------~~aqNaLLK~LEEP----p~~t~fiLit~~~~~ll~TI~SRC-~~i~~~~p~~ 140 (198)
T d2gnoa2 89 ERM-----T-------QQAANAFLKALEEP----PEYAVIVLNTRRWHYLLPTIKSRV-FRVVVNVPKE 140 (198)
T ss_dssp GGB-----C-------HHHHHHTHHHHHSC----CTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCHH
T ss_pred CCC-----C-------HHHHHHHHHHHHCC----CCCCEEEECCCCHHHCHHHHHCCE-EEEECCCCHH
T ss_conf 103-----6-------66664788877378----988522220699566878873522-7776799368
No 49
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=98.90 E-value=1.4e-10 Score=85.51 Aligned_cols=91 Identities=12% Similarity=0.162 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCHHHHHC---------CCHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCCC
Q ss_conf 899999998610378986999747033411---------59336899999871399--9889996225788632248999
Q 000858 689 AINELFEVALNESKSSPLIVFVKDIEKSLT---------GNNDAYGALKSKLENLP--SNVVVIGSHTQLDSRKEKSHPG 757 (1251)
Q Consensus 689 ~~~~l~evl~ses~~~P~Ilfi~Dve~~l~---------~~~~~~~~l~~~L~~L~--g~VivIgs~~~~d~~k~k~~~~ 757 (1251)
.+..+|+-+. +|.||||||++.... ...+..+.+...++.+. .+|+|||+||..+.
T Consensus 172 ~~~~~f~~a~-----~~~ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~~-------- 238 (321)
T d1w44a_ 172 FVDDIARAML-----QHRVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNPTSN-------- 238 (321)
T ss_dssp HHHHHHHHHH-----HCSEEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCCC--------
T ss_pred HHHHHHHHHH-----HCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC--------
T ss_conf 9999999986-----265897410122212345678987413345156652035566788499983797635--------
Q ss_pred CCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHHHHHHHHHHCCCC
Q ss_conf 750203576033220136899855223234562699989763179808853883467999--999998543344320320
Q 000858 758 GLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSN 835 (1251)
Q Consensus 758 ~~~~~~~~~~~~~l~d~~~pd~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferqle~~Lpd~~gR~~ 835 (1251)
++.+ |++++| ||+++++.+.||..+|.+
T Consensus 239 -------------------~~~i-------------------------------~~~~~r~~Rf~~~v~v~~pd~~~r~~ 268 (321)
T d1w44a_ 239 -------------------DDKI-------------------------------VELVKEASRSNSTSLVISTDVDGEWQ 268 (321)
T ss_dssp -------------------CHHH-------------------------------HHHHHHHHHHSCSEEEEECSSTTEEE
T ss_pred -------------------CCCH-------------------------------HHHHHCCCCCCCEEECCCCCHHHHHH
T ss_conf -------------------3101-------------------------------02333657555421158988678999
Q ss_pred HHHHHHH
Q ss_conf 3678877
Q 000858 836 IISIRSV 842 (1251)
Q Consensus 836 Il~IhT~ 842 (1251)
|+..|+.
T Consensus 269 il~~~~~ 275 (321)
T d1w44a_ 269 VLTRTGE 275 (321)
T ss_dssp EEEECBT
T ss_pred HHHHHCC
T ss_conf 9998625
No 50
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=1.6e-08 Score=71.75 Aligned_cols=81 Identities=22% Similarity=0.358 Sum_probs=64.7
Q ss_pred EEECCEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEECC-CCEEEECCEECCCCCEEEEECCCEEEECCC
Q ss_conf 5644536870478521252499887553189982059965299998438-744998695508986387007988998138
Q 000858 148 SMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGG-KGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1251)
Q Consensus 148 ~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~-~G~v~vNg~~~~k~~~~~L~~gdev~f~~~ 226 (1251)
.+....++||| ..||+.|.++.+|..||.|.....+.....++.+.++ +|| +|||+++.. ++.|+.||+|.|+.
T Consensus 20 ~l~~~~~~iGr-~~~dI~l~~~~vs~~Ha~i~~~~~~~~~~~~i~d~~s~~gt-~VNg~~i~~--~~~L~~gD~I~~G~- 94 (102)
T d2g1la1 20 HIKDGVTRVGQ-VDMDIKLTGQFIREQHCLFRSIPQPDGEVVVTLEPCEGAET-YVNGKLVTE--PLVLKSGNRIVMGK- 94 (102)
T ss_dssp ECCSEEEEEES-SSCSEECCCTTCCSEEEEEEEEECTTSCEEEEEEECTTCCE-EETTEECCS--CEECCTTCEEEETT-
T ss_pred ECCCCCEECCC-CCCCEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCE-EECCEECCC--EEECCCCCEEEECC-
T ss_conf 82898577999-97478864431110026999988688947998638988880-899869265--16968999999899-
Q ss_pred CCEEEEEE
Q ss_conf 97147964
Q 000858 227 GKHSYIFQ 234 (1251)
Q Consensus 227 ~~~ayifq 234 (1251)
.+.|.|.
T Consensus 95 -~~~frf~ 101 (102)
T d2g1la1 95 -NHVFRFN 101 (102)
T ss_dssp -TEEEEEE
T ss_pred -CEEEEEC
T ss_conf -8899983
No 51
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.82 E-value=1.9e-09 Score=78.00 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 06789999874221024554222247899888931202789815889999999984418719998466789
Q 000858 461 SDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLLP 531 (1251)
Q Consensus 461 se~tk~~L~~~~~~hL~~~~~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~~~ 531 (1251)
-++.|.+|..+.|-|++...+..-.+.-.+ -+.|||.|||| ..++.||||||+.++.++..+|.+.+-
T Consensus 19 Qd~A~~~l~~av~~~~~r~~~~~~~~~~~~-~~~iLl~GPpG--~GKT~lAkalA~~~~~~~~~i~~s~~~ 86 (309)
T d1ofha_ 19 QADAKRAVAIALRNRWRRMQLQEPLRHEVT-PKNILMIGPTG--VGKTEIARRLAKLANAPFIKVEATKFT 86 (309)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSCHHHHHHCC-CCCEEEECCTT--SSHHHHHHHHHHHHTCCEEEEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCEEEEECCCC--CCHHHHHHHHHHCCCCCHHCCCCCCCC
T ss_conf 199999999999989877245787766789-86699989999--888899999862132210003443301
No 52
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.61 E-value=1.5e-07 Score=65.14 Aligned_cols=79 Identities=22% Similarity=0.361 Sum_probs=63.7
Q ss_pred EEECCEEEECCC--CCCCEEECCCCCCCCCEEEEEEECCCCCEEEEEEECC-CCEEEECCEECCCCCEEEEECCCEEEEC
Q ss_conf 564453687047--8521252499887553189982059965299998438-7449986955089863870079889981
Q 000858 148 SMTGAVFTVGHN--RQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGG-KGEVEVNGNVHPKDSQVVLRGGDELVFS 224 (1251)
Q Consensus 148 ~i~~~~~t~G~~--~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~-~G~v~vNg~~~~k~~~~~L~~gdev~f~ 224 (1251)
.|.....+||++ ..||+.|.++.||..||.|.... +. .+|++.++ ||| +|||+++.+ .+.|+.||+|.|+
T Consensus 25 ~l~~~~~~iG~~rs~~~dI~L~~~~Vs~~Ha~i~~~~--~~--~~l~d~~s~~gt-~vng~~v~~--~~~L~~gd~i~iG 97 (107)
T d1wlna1 25 RLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMD--GV--VTVTPRSMDAET-YVDGQRISE--TTMLQSGMRLQFG 97 (107)
T ss_dssp ECCSEEEECSSSCCSTTCCCCCCTTCCSSCEEEEESS--SC--EEEEESCSSSCE-EETSCBCSS--CEEECTTCEEEET
T ss_pred EECCCCEEECCCCCCCCCEEECCCCEEEEEEEEEECC--CC--CEEECCCCCCCE-EECCCCCCC--EEECCCCCEEEEC
T ss_conf 9799987999987899849989965332199999724--63--199527888632-995202364--0699999999989
Q ss_pred CCCCEEEEEEE
Q ss_conf 38971479640
Q 000858 225 PSGKHSYIFQQ 235 (1251)
Q Consensus 225 ~~~~~ayifq~ 235 (1251)
. .|.|.|.+
T Consensus 98 ~--~~~Frf~~ 106 (107)
T d1wlna1 98 T--SHVFKFVD 106 (107)
T ss_dssp T--TEEEEEEC
T ss_pred C--CEEEEEEC
T ss_conf 9--62999959
No 53
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.20 E-value=9.1e-06 Score=53.19 Aligned_cols=120 Identities=20% Similarity=0.226 Sum_probs=62.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC-----------------------C------CCC---CCCC------
Q ss_conf 2999958977499999999999199399995652-----------------------1------100---1474------
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS-----------------------I------TSK---WFGE------ 1027 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~-----------------------L------~s~---~~Ge------ 1027 (1251)
.|+|.||+|+|||+|++.|+..+......+.... + ... ..+.
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFE 81 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC------CCEEEEEETTCCEEEEEETTCCCSSEETTEEECHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 89999899938999999998148888646998771328888765311233667778875411345544302303762566
Q ss_pred --HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC--
Q ss_conf --0899999999988309915998442000147899852799999998677640688556886489999438988873--
Q 000858 1028 --GEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLD-- 1103 (1251)
Q Consensus 1028 --sEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld-- 1103 (1251)
.....+..+..+....|.+|++||++.... .. ......+...+.. .+..+|+++.......
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~------~~---~~~~~~l~~~l~~------~~~~il~~~h~~~~~~~~ 146 (178)
T d1ye8a1 82 ELAIPILERAYREAKKDRRKVIIIDEIGKMEL------FS---KKFRDLVRQIMHD------PNVNVVATIPIRDVHPLV 146 (178)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCCSTTGG------GC---HHHHHHHHHHHTC------TTSEEEEECCSSCCSHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCH------HH---HHHHHHHHHHHCC------CCCEEEEEECCHHHHHHH
T ss_conf 53201378999999740997423027773100------45---7999999987505------797899997447789863
Q ss_pred HHHHHCC-CCCCCCCCCC
Q ss_conf 9998203-5442478999
Q 000858 1104 EAVVRRL-PRRLMVNLPD 1120 (1251)
Q Consensus 1104 ~aLlrRF-~~~I~I~lPd 1120 (1251)
..+.++. ...+.+...+
T Consensus 147 ~~i~~~~~~~i~~v~~~n 164 (178)
T d1ye8a1 147 KEIRRLPGAVLIELTPEN 164 (178)
T ss_dssp HHHHTCTTCEEEECCTTT
T ss_pred CEEEEEECCEEEEECCCC
T ss_conf 659987199999989964
No 54
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.93 E-value=0.00022 Score=43.91 Aligned_cols=174 Identities=14% Similarity=0.072 Sum_probs=91.3
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----CCC---EEEEECCCCCC
Q ss_conf 12483999999999987403782555217888899329999589774999999999991----993---99995652110
Q 000858 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GAN---FINISMSSITS 1022 (1251)
Q Consensus 950 dI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el----g~p---fi~Id~s~L~s 1022 (1251)
++.|.+...+.+.+.+.. .. .....-|.|+|..|+|||+||+.++++. +.. ++.+..+....
T Consensus 21 ~~~gR~~~~~~i~~~L~~----------~~-~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~ 89 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDE----------MC-DLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAP 89 (277)
T ss_dssp CSCCCHHHHHHHHHHHHH----------HT-TSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCST
T ss_pred CEECCHHHHHHHHHHHHH----------CC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 623739999999999873----------46-8784089997799788899999999855655401276489999368777
Q ss_pred C------------------------CCCCHHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0------------------------147408999999-999883099159984420001478998527999999986776
Q 000858 1023 K------------------------WFGEGEKYVKAV-FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV 1077 (1251)
Q Consensus 1023 ~------------------------~~GesEk~Ir~i-F~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~ 1077 (1251)
. .........+.. ....-...+++|++|+++.. ...+ .+.
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~----------~~~~----~~~- 154 (277)
T d2a5yb3 90 KSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE----------ETIR----WAQ- 154 (277)
T ss_dssp THHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH----------HHHH----HHH-
T ss_pred HHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH----------HHHH----HHC-
T ss_conf 7789999999998722022027863212336999999999984468816752506677----------6655----520-
Q ss_pred HCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC--HHCHHHHHHHCCCCCH
Q ss_conf 40688556886489999438988873999820354424789997899999999995222688--0219999998389959
Q 000858 1078 NWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELAS--DVDLEGIANMADGYSG 1155 (1251)
Q Consensus 1078 ~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~I~lPd~eeR~eILk~ll~k~~l~~--dvdl~~LA~~T~Gysg 1155 (1251)
. ....+|.||.....+. .+.... ..+.+...+.++-.++|..+........ +.....++..+.|. |
T Consensus 155 ---~------~~srilvTTR~~~v~~-~~~~~~-~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~Gl-P 222 (277)
T d2a5yb3 155 ---E------LRLRCLVTTRDVEISN-AASQTC-EFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGN-P 222 (277)
T ss_dssp ---H------TTCEEEEEESBGGGGG-GCCSCE-EEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTC-H
T ss_pred ---C------CCCEEEEEEEHHHHHH-HCCCCC-CEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC-H
T ss_conf ---4------5755999964489998-637887-16877889979999999998477667425679999999995899-8
Q ss_pred HHHHHH
Q ss_conf 999999
Q 000858 1156 SDLKNL 1161 (1251)
Q Consensus 1156 ~DLk~L 1161 (1251)
-.|..+
T Consensus 223 LAl~~i 228 (277)
T d2a5yb3 223 ATLMMF 228 (277)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 55
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=97.84 E-value=7.9e-05 Score=46.87 Aligned_cols=65 Identities=20% Similarity=0.311 Sum_probs=48.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 3334554430678999987422102455422224789988893120278981588999999998441871999846678
Q 000858 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1251)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hL~~~~~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~~ 530 (1251)
+||+ +.-.|+.+..|....-.+.+..+. -+-+||+|||| +...+||++||++++.....+..+..
T Consensus 7 ~~~d--ivGqe~~~~~l~~~i~~~~~~~~~----------~~~~L~~GPpG--tGKT~lA~~la~~~~~~~~~~~~~~~ 71 (238)
T d1in4a2 7 SLDE--FIGQENVKKKLSLALEAAKMRGEV----------LDHVLLAGPPG--LGKTTLAHIIASELQTNIHVTSGPVL 71 (238)
T ss_dssp SGGG--CCSCHHHHHHHHHHHHHHHHHTCC----------CCCEEEESSTT--SSHHHHHHHHHHHHTCCEEEEETTTC
T ss_pred CHHH--CCCHHHHHHHHHHHHHHHHHCCCC----------CCEEEEECCCC--CCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 2999--089599999999999978853887----------77489879999--73889999998503888533257442
No 56
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.78 E-value=0.0011 Score=39.24 Aligned_cols=77 Identities=18% Similarity=0.075 Sum_probs=50.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCC-CCCCCC-CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 3334554430678999987422102455-422224-78998889312027898158899999999844187199984667
Q 000858 452 SFESFPYYLSDITKNVLIASTYVHLKCN-NFAKYA-SDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1251)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hL~~~-~~~k~~-~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~ 529 (1251)
+|+++-.. ++.+.-|......+.... .-.++. ..=....+.+||+|||| ....++|+|||++++.....++.+.
T Consensus 12 ~~~dlig~--~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG--~GKTt~a~~la~~~~~~~~~~~~~~ 87 (253)
T d1sxja2 12 NLQQVCGN--KGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPG--IGKTTAAHLVAQELGYDILEQNASD 87 (253)
T ss_dssp SGGGCCSC--HHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTT--SSHHHHHHHHHHHTTCEEEEECTTS
T ss_pred CHHHHCCC--HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCC--CCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99996698--9999999999996253002343232025788874499987999--9888999999999875120134432
Q ss_pred CCC
Q ss_conf 899
Q 000858 530 LPG 532 (1251)
Q Consensus 530 ~~g 532 (1251)
..+
T Consensus 88 ~~~ 90 (253)
T d1sxja2 88 VRS 90 (253)
T ss_dssp CCC
T ss_pred CHH
T ss_conf 211
No 57
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.62 E-value=5.5e-05 Score=47.92 Aligned_cols=126 Identities=20% Similarity=0.236 Sum_probs=80.5
Q ss_pred CCCEEEEECCHHHHHC-----CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCC
Q ss_conf 8986999747033411-----59336899999871399988999622578863224899975020357603322013689
Q 000858 703 SSPLIVFVKDIEKSLT-----GNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFP 777 (1251)
Q Consensus 703 ~~P~Ilfi~Dve~~l~-----~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~l~d~~~p 777 (1251)
.+++||||+|++.++. |+.+..+.|+..|. +|.+-|||+|+.-+++
T Consensus 114 ~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~--rg~~~~I~~tT~~ey~--------------------------- 164 (387)
T d1qvra2 114 QGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALA--RGELRLIGATTLDEYR--------------------------- 164 (387)
T ss_dssp CSSEEEEECCC-------------------HHHHH--TTCCCEEEEECHHHHH---------------------------
T ss_pred CCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHH--CCCCCEEEECCHHHHH---------------------------
T ss_conf 99669872408888427778774138999999973--7885166636899998---------------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH--HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHH
Q ss_conf 9855223234562699989763179808853883467999--99999854334432032036788773308998510000
Q 000858 778 DNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNIISIRSVLSRNGLDCVDLES 855 (1251)
Q Consensus 778 d~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferqle~~Lpd~~gR~~Il~IhT~l~~~~l~~~dL~~ 855 (1251)
. .+.+.+|.++| .+|.|.+|+.+...+ +--++-|.....+....+.+.- ++.|..
T Consensus 165 -----------~-~e~d~al~rrF-~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~----------~v~ls~ 221 (387)
T d1qvra2 165 -----------E-IEKDPALERRF-QPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIA----------AATLSH 221 (387)
T ss_dssp -----------H-HTTCTTTCSCC-CCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHH----------HHHHHH
T ss_pred -----------H-HCCCHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH----------HHHHCC
T ss_conf -----------7-63367999824-611279986788999999999998740477466999999----------998502
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 2202578887889998734655676
Q 000858 856 LCIKDQTLTTEGVEKIVGWALSHHF 880 (1251)
Q Consensus 856 La~~tkg~sgadIe~Lv~~A~s~Al 880 (1251)
-...+..|.+..|.-|-..++-..+
T Consensus 222 ryi~~r~~PdKAidlld~a~a~~~i 246 (387)
T d1qvra2 222 RYITERRLPDKAIDLIDEAAARLRM 246 (387)
T ss_dssp HHCCSSCTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 3666566704688999999999986
No 58
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.59 E-value=5.6e-05 Score=47.85 Aligned_cols=134 Identities=20% Similarity=0.274 Sum_probs=81.8
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCHHHHHC------CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEC
Q ss_conf 99999998610378986999747033411------593368999998713999889996225788632248999750203
Q 000858 690 INELFEVALNESKSSPLIVFVKDIEKSLT------GNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTK 763 (1251)
Q Consensus 690 ~~~l~evl~ses~~~P~Ilfi~Dve~~l~------~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~ 763 (1251)
+..+++-+. +.+.+||||+|++.++. ++.+..+.|+..|. +|.+-|||+++..++++
T Consensus 99 ~~~i~~~~~---~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~--rg~i~vIgatT~eey~~------------ 161 (268)
T d1r6bx2 99 FKALLKQLE---QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS--SGKIRVIGSTTYQEFSN------------ 161 (268)
T ss_dssp HHHHHHHHS---SSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSS--SCCCEEEEEECHHHHHC------------
T ss_pred HHHHHHHHH---CCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHH--CCCCEEEEECCHHHHHH------------
T ss_conf 999999861---2678468843369886277778864117987648874--79875999579999999------------
Q ss_pred CCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHH--HHHHHHHHHHHCCCCHHHHHH
Q ss_conf 576033220136899855223234562699989763179808853883467999999--998543344320320367887
Q 000858 764 FGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLSDWK--QQLERDVETLKGQSNIISIRS 841 (1251)
Q Consensus 764 ~~~~~~~l~d~~~pd~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlRRfe--rqle~~Lpd~~gR~~Il~IhT 841 (1251)
..+.+.+|.++| .+|.|.+|+.+..++.+. .+.+.....+....+.+.-
T Consensus 162 --------------------------~~e~d~al~rrF-~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~-- 212 (268)
T d1r6bx2 162 --------------------------IFEKDRALARRF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA-- 212 (268)
T ss_dssp --------------------------CCCCTTSSGGGE-EEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHH--
T ss_pred --------------------------HHHHCHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHH--
T ss_conf --------------------------986167888652-100368989999999999866888526877857478999--
Q ss_pred HHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 7330899851000022025788878899987346556
Q 000858 842 VLSRNGLDCVDLESLCIKDQTLTTEGVEKIVGWALSH 878 (1251)
Q Consensus 842 ~l~~~~l~~~dL~~La~~tkg~sgadIe~Lv~~A~s~ 878 (1251)
++.|..-......|.+..|+-+ .+|...
T Consensus 213 --------~v~ls~ryi~~~~~PdKAIdll-Dea~a~ 240 (268)
T d1r6bx2 213 --------AVELAVKYINDRHLPDKAIDVI-DEAGAR 240 (268)
T ss_dssp --------HHHHHHHHCTTSCTTHHHHHHH-HHHHHH
T ss_pred --------HHHHHHHHCCCCCCCCHHHHHH-HHHHHH
T ss_conf --------9999985604788984899999-999999
No 59
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.52 E-value=0.0007 Score=40.46 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=65.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC---CCEEEEECC-
Q ss_conf 9888841124839999999999874037825552178888993299995897749999999999919---939999565-
Q 000858 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISMS- 1018 (1251)
Q Consensus 943 e~~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg---~pfi~Id~s- 1018 (1251)
....++++++-.....+.+++.+.. +..-+|+.||.|+|||++..++..++. .+++.+.-+
T Consensus 132 ~~~~~l~~LG~~~~~~~~l~~l~~~---------------~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPi 196 (401)
T d1p9ra_ 132 ATRLDLHSLGMTAHNHDNFRRLIKR---------------PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPI 196 (401)
T ss_dssp TTCCCGGGSCCCHHHHHHHHHHHTS---------------SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSC
T ss_pred CCCHHHHHHCCCHHHHHHHHHHHHH---------------HHCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 3200144301357778999999864---------------1054898767877744779998666257874699962674
Q ss_pred CCCCC------CCCCHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 21100------147408999999999883099159984420
Q 000858 1019 SITSK------WFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1251)
Q Consensus 1019 ~L~s~------~~GesEk~Ir~iF~~A~k~~PsIIfIDEID 1053 (1251)
+..-. ..+............+.++.|-||+|.||-
T Consensus 197 E~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiR 237 (401)
T d1p9ra_ 197 EFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIR 237 (401)
T ss_dssp CSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCC
T ss_pred CCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCC
T ss_conf 34567887026558767799999999984138889845768
No 60
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.51 E-value=2.7e-05 Score=50.03 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=32.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 93299995897749999999999919939999565211
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1021 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~ 1021 (1251)
++.|+|.||||+|||+||+++|..++.+++......+.
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~ 44 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFV 44 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHH
T ss_conf 32899989999989999999999849986753167776
No 61
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.48 E-value=0.0019 Score=37.56 Aligned_cols=76 Identities=20% Similarity=0.208 Sum_probs=50.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCCC----------------------------CCCCHHHH
Q ss_conf 99329999589774999999999991---993999956521100----------------------------14740899
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------------------WFGEGEKY 1031 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s~----------------------------~~GesEk~ 1031 (1251)
+..-++|+|+||+|||.++..+|... +..+..++...-... ........
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDH 104 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCHHHHHHH
T ss_conf 98499999189999999999999999872324411212679999999999829986998545861799730001017999
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 999999988309915998442000147
Q 000858 1032 VKAVFSLASKIAPSVVFVDEVDSMLGR 1058 (1251)
Q Consensus 1032 Ir~iF~~A~k~~PsIIfIDEID~L~~~ 1058 (1251)
+..+........+.+++||.++.++..
T Consensus 105 ~~~i~~~i~~~~~~~vviDs~~~~~~~ 131 (242)
T d1tf7a2 105 LQIIKSEINDFKPARIAIDSLSALARG 131 (242)
T ss_dssp HHHHHHHHHTTCCSEEEEECHHHHTSS
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHCC
T ss_conf 999999998408853322043143048
No 62
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.47 E-value=8.1e-05 Score=46.79 Aligned_cols=32 Identities=28% Similarity=0.638 Sum_probs=28.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
+.|+|.||||+|||++|+.+|..++++|+..+
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 74999899999999999999999699969500
No 63
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.37 E-value=0.00084 Score=39.93 Aligned_cols=73 Identities=26% Similarity=0.316 Sum_probs=45.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCCC----------------CCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 329999589774999999999991---993999956521100----------------1474089999999998830991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIAPS 1045 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s~----------------~~GesEk~Ir~iF~~A~k~~Ps 1045 (1251)
.-.+|+||||+|||+++-.++... +..++.++...-+.. .....|..+..+-...+...+.
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~~~~~~ 134 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVD 134 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCS
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf 58998057774789999999999870898799986544548999998399879979962898999999999998549998
Q ss_pred EEEECCCCCCCC
Q ss_conf 599844200014
Q 000858 1046 VVFVDEVDSMLG 1057 (1251)
Q Consensus 1046 IIfIDEID~L~~ 1057 (1251)
+|+||-+..+++
T Consensus 135 liViDSi~al~~ 146 (263)
T d1u94a1 135 VIVVDSVAALTP 146 (263)
T ss_dssp EEEEECGGGCCC
T ss_pred EEEEECCCCCCC
T ss_conf 999988655666
No 64
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.31 E-value=0.0035 Score=35.74 Aligned_cols=115 Identities=19% Similarity=0.190 Sum_probs=57.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCC--------------C------CCCCCHHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991---9939999565211--------------0------0147408999999999883
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSIT--------------S------KWFGEGEKYVKAVFSLASK 1041 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~--------------s------~~~GesEk~Ir~iF~~A~k 1041 (1251)
+-++|.||+|+|||+.+..+|..+ +..+.-+.+-... + .........+......++.
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~~ 86 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKA 86 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 79999899999889999999999997799079998136665402667640545682389616774278899998999998
Q ss_pred CCCCEEEECCCCCCCCCCCCCCHHHHHHHH--HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHH
Q ss_conf 099159984420001478998527999999--986776406885568864899994389888739998
Q 000858 1042 IAPSVVFVDEVDSMLGRRENPGEHEAMRKM--KNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVV 1107 (1251)
Q Consensus 1042 ~~PsIIfIDEID~L~~~r~~~~~~~~~~~i--l~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLl 1107 (1251)
..-.+|+||=..+. +...+.+..+ +......++... +...++|+.++...+.++....
T Consensus 87 ~~~d~ilIDTaGr~------~~d~~l~~el~~~~~~~~~~~~~~--p~~~~LVl~a~~~~~~~~~~~~ 146 (207)
T d1okkd2 87 RGYDLLFVDTAGRL------HTKHNLMEELKKVKRAIAKADPEE--PKEVWLVLDAVTGQNGLEQAKK 146 (207)
T ss_dssp HTCSEEEECCCCCC------TTCHHHHHHHHHHHHHHHHHCTTC--CSEEEEEEETTBCTHHHHHHHH
T ss_pred CCCCEEECCCCCCC------HHHHHHHHHHHHHHHHHHHCCCCC--CCEEEEEEECCCCCHHHHHHHH
T ss_conf 79999971752223------112778888777777765325678--7359999620047167899997
No 65
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.28 E-value=0.00013 Score=45.34 Aligned_cols=32 Identities=47% Similarity=0.838 Sum_probs=28.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
+.|+|.||||+|||++|+.+|..++++++.++
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEECH
T ss_conf 97989899999989999999999799589516
No 66
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.24 E-value=9.3e-05 Score=46.38 Aligned_cols=32 Identities=34% Similarity=0.587 Sum_probs=29.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
++|+|.|+||+|||++++.+|..++++|+..+
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEEECC
T ss_conf 93999899999889999999998399878367
No 67
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=97.22 E-value=0.0031 Score=36.09 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=28.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECC
Q ss_conf 8899329999589774999999999991----9939999565
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMS 1018 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~el----g~pfi~Id~s 1018 (1251)
.+|..-++|.|+||+|||+++..+|..+ +.++..+++.
T Consensus 32 ~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E 73 (277)
T d1cr2a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73 (277)
T ss_dssp BCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 789808999947999799999999972655336634576401
No 68
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.21 E-value=0.0056 Score=34.39 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=70.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCC--------------------CCCCCHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991---99399995652110--------------------01474089999999998
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS--------------------KWFGEGEKYVKAVFSLA 1039 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s--------------------~~~GesEk~Ir~iF~~A 1039 (1251)
.|.-++|.||+|+|||+.+..+|..+ +..+.-+.+-.... ....+....+......+
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a 87 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA 87 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99799998999999899999999999977994799823213666120455543433886211356877999999999999
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCCCEEEEEECCCCCCCCHHHHH--CCC-CCCC
Q ss_conf 8309915998442000147899852799999998677640688556-88648999943898887399982--035-4424
Q 000858 1040 SKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DKERVLVLAATNRPFDLDEAVVR--RLP-RRLM 1115 (1251)
Q Consensus 1040 ~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k-~~~~VlVIaTTN~pe~Ld~aLlr--RF~-~~I~ 1115 (1251)
+...--+|+||=..+. +.....+. -+..+...+...... +...++|+-++...+.+...... .++ ..+.
T Consensus 88 ~~~~~d~ilIDTaGr~------~~d~~~~~-el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI 160 (211)
T d2qy9a2 88 KARNIDVLIADTAGRL------QNKSHLME-ELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGIT 160 (211)
T ss_dssp HHTTCSEEEECCCCCG------GGHHHHHH-HHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCCCEEE
T ss_pred HHCCCCEEEECCCCCC------CCCHHHHH-HHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHHCCCCCEEE
T ss_conf 8769988996568876------32077899-9999999985304668600122001235763377876442101786489
Q ss_pred CCCCCHHHHH-HHHHHH
Q ss_conf 7899978999-999999
Q 000858 1116 VNLPDAPNRE-KIIRVI 1131 (1251)
Q Consensus 1116 I~lPd~eeR~-eILk~l 1131 (1251)
+.-.|...|. .++...
T Consensus 161 lTKlDe~~~~G~~l~~~ 177 (211)
T d2qy9a2 161 LTKLDGTAKGGVIFSVA 177 (211)
T ss_dssp EECCTTCTTTTHHHHHH
T ss_pred EEECCCCCCCCHHHHHH
T ss_conf 96127888720999999
No 69
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.19 E-value=0.0032 Score=36.06 Aligned_cols=111 Identities=22% Similarity=0.263 Sum_probs=60.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCCC----------------CCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 329999589774999999999991---993999956521100----------------1474089999999998830991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIAPS 1045 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s~----------------~~GesEk~Ir~iF~~A~k~~Ps 1045 (1251)
+-..++||+|+|||++|..++..+ |..++.+|...-+.. .....|+.+.-+-...+...+.
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~~~~~~ 137 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAID 137 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf 47898058765227999999999970799899998876589999998289812379974899999999999998658971
Q ss_pred EEEECCCCCCCCCCCCCCH---H--HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 5998442000147899852---7--99999998677640688556886489999438
Q 000858 1046 VVFVDEVDSMLGRRENPGE---H--EAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1251)
Q Consensus 1046 IIfIDEID~L~~~r~~~~~---~--~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN 1097 (1251)
+|+||-+..++++..-... . ....+++..++..+..+... .++.+|++..
T Consensus 138 liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~~--~~~~vi~tNQ 192 (268)
T d1xp8a1 138 VVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSK--TGTAAIFINQ 192 (268)
T ss_dssp EEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTT--TCCEEEEEEE
T ss_pred EEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEEE
T ss_conf 999945454553888716534105779999999999997766643--2976999967
No 70
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.16 E-value=0.00013 Score=45.30 Aligned_cols=32 Identities=25% Similarity=0.553 Sum_probs=28.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
+.|+|.|+||+|||++|+.+|..+|++|+..+
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEEEHH
T ss_conf 98899889999889999999999499878656
No 71
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=97.14 E-value=0.0052 Score=34.63 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=24.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 99329999589774999999999991---993999956
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
+|.-++|.||+|+|||+.+..+|..+ +..+.-+.+
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~ 47 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAA 47 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99899998999998899999999999977990699960
No 72
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.10 E-value=0.00016 Score=44.74 Aligned_cols=31 Identities=26% Similarity=0.615 Sum_probs=28.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 2999958977499999999999199399995
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
.|+|.|+||+|||++++.+|..++.+|+..+
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 4899889999889999999998499869602
No 73
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.05 E-value=0.00015 Score=44.90 Aligned_cols=36 Identities=31% Similarity=0.530 Sum_probs=31.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 329999589774999999999991993999956521
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L 1020 (1251)
+-|+|.||||+|||++|++++..++.+++.++...+
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEEECHHHH
T ss_conf 599998899998899999999995999799068999
No 74
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.03 E-value=0.0081 Score=33.33 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=52.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECCCCCCC---------------------------------
Q ss_conf 8899329999589774999999999991----993999956521100---------------------------------
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSITSK--------------------------------- 1023 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~el----g~pfi~Id~s~L~s~--------------------------------- 1023 (1251)
..+..-++|+|+||+|||+++..++... +..+..++...-...
T Consensus 23 i~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (242)
T d1tf7a1 23 LPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQ 102 (242)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSCC
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCHHHH
T ss_conf 96983999994799999999999999999856887420126679999999999849984898871430244421033544
Q ss_pred -CCC--CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf -147--40899999999988309915998442000147899852799999998677640
Q 000858 1024 -WFG--EGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNW 1079 (1251)
Q Consensus 1024 -~~G--esEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~l 1079 (1251)
... .....+..+.....++.+.+++||.+..++..... .....+.+..+...+
T Consensus 103 ~~~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~~~~---~~~~~~~~~~~~~~~ 158 (242)
T d1tf7a1 103 EVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDA---SSVVRRELFRLVARL 158 (242)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTTTCC---HHHHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHH
T ss_conf 44302458999999999988631222002078899876057---267899999999999
No 75
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=97.02 E-value=0.00082 Score=40.01 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=50.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 333455443067899998742210245542222478998889312027898158899999999844187199984667
Q 000858 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1251)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hL~~~~~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~ 529 (1251)
|||+| +-.|++|..|......+...+.. -+.+||+|||| +...+|||++|++++..+..++.+.
T Consensus 7 ~~ddi--vGq~~~~~~L~~~i~~~~~~~~~----------~~~~Ll~GPpG--~GKTtla~~la~~~~~~~~~~~~~~ 70 (239)
T d1ixsb2 7 TLDEY--IGQERLKQKLRVYLEAAKARKEP----------LEHLLLFGPPG--LGKTTLAHVIAHELGVNLRVTSGPA 70 (239)
T ss_dssp SGGGS--CSCHHHHHHHHHHHHHHTTSSSC----------CCCEEEECCTT--SCHHHHHHHHHHHHTCCEEEEETTT
T ss_pred CHHHH--CCHHHHHHHHHHHHHHHHHCCCC----------CCEEEEECCCC--CCHHHHHHHHHHHHCCCEEECCCCC
T ss_conf 88894--89899999999999978735888----------87389889799--8788899999998498747546875
No 76
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.96 E-value=0.00056 Score=41.15 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=29.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 329999589774999999999991993999956
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~ 1017 (1251)
+-|+|.|+||+|||++|++++..++.+++.++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC
T ss_conf 599998999999899999999972899699614
No 77
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.95 E-value=0.00029 Score=43.07 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.3
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 93299995897749999999999919939999
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
|..|+|.||||+|||++|+.|+..++++++.+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~is~ 34 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHISA 34 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEECCH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEEEH
T ss_conf 72999988999998999999999879917850
No 78
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.93 E-value=0.00039 Score=42.16 Aligned_cols=74 Identities=23% Similarity=0.345 Sum_probs=57.3
Q ss_pred CCCEEEEECCHHHHHC-----CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCC
Q ss_conf 8986999747033411-----59336899999871399988999622578863224899975020357603322013689
Q 000858 703 SSPLIVFVKDIEKSLT-----GNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFP 777 (1251)
Q Consensus 703 ~~P~Ilfi~Dve~~l~-----~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~l~d~~~p 777 (1251)
.+++||||+|++.++. +..+..+.|+..|. +|.+.|||+++..+++
T Consensus 114 ~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~--rg~l~~IgatT~eey~--------------------------- 164 (195)
T d1jbka_ 114 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA--RGELHCVGATTLDEYR--------------------------- 164 (195)
T ss_dssp TTTEEEEEETGGGGTT------CCCCHHHHHHHHH--TTSCCEEEEECHHHHH---------------------------
T ss_pred CCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHH--CCCCEEEECCCHHHHH---------------------------
T ss_conf 98089972608998437877775238999999985--7995498518999999---------------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH
Q ss_conf 9855223234562699989763179808853883467999
Q 000858 778 DNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS 817 (1251)
Q Consensus 778 d~~~~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR 817 (1251)
...+.+.+|.++| .+|.|.+|+.+..++
T Consensus 165 -----------~~~e~d~aL~rrF-~~I~V~Ep~~e~t~~ 192 (195)
T d1jbka_ 165 -----------QYIEKDAALERRF-QKVFVAEPSVEDTIA 192 (195)
T ss_dssp -----------HHTTTCHHHHTTE-EEEECCCCCHHHHHT
T ss_pred -----------HHHHCCHHHHHCC-CEEECCCCCHHHHHH
T ss_conf -----------9987388999639-875458989899999
No 79
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.92 E-value=0.01 Score=32.61 Aligned_cols=140 Identities=16% Similarity=0.081 Sum_probs=65.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCC--------------CC------CCCCCHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991---993999956521--------------10------01474089999999998
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSI--------------TS------KWFGEGEKYVKAVFSLA 1039 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L--------------~s------~~~GesEk~Ir~iF~~A 1039 (1251)
.|.-++|.||+|+|||+.+..+|..+ +..+.-+.+-.. ++ ....+....+......+
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~~ 90 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKF 90 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf 99899998999999899999999999977993699972023551567898740146842230244102447899999874
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHH--CCCC-CCCC
Q ss_conf 830991599844200014789985279999999867764068855688648999943898887399982--0354-4247
Q 000858 1040 SKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPR-RLMV 1116 (1251)
Q Consensus 1040 ~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLlr--RF~~-~I~I 1116 (1251)
+...-.+|+||=..+. +..... ..+.++....+... ....++|+.++...+.++..... .++. .+.+
T Consensus 91 ~~~~~d~IlIDTaGr~------~~~~~~--~~~~el~~~~~~~~--~~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~ 160 (211)
T d1j8yf2 91 LSEKMEIIIVDTAGRH------GYGEEA--ALLEEMKNIYEAIK--PDEVTLVIDASIGQKAYDLASKFNQASKIGTIII 160 (211)
T ss_dssp HHTTCSEEEEECCCSC------CTTCHH--HHHHHHHHHHHHHC--CSEEEEEEEGGGGGGHHHHHHHHHHHCTTEEEEE
T ss_pred HCCCCCEEEEECCCCC------CCCHHH--HHHHHHHHHHHHCC--CCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEE
T ss_conf 0267736998537767------631366--78999999986259--7668999843568406778766530367553788
Q ss_pred CCCCHHHHH-HHHHHHH
Q ss_conf 899978999-9999999
Q 000858 1117 NLPDAPNRE-KIIRVIL 1132 (1251)
Q Consensus 1117 ~lPd~eeR~-eILk~ll 1132 (1251)
.-.|...|. .++....
T Consensus 161 TKlDet~~~G~~l~~~~ 177 (211)
T d1j8yf2 161 TKMDGTAKGGGALSAVA 177 (211)
T ss_dssp ECTTSCSCHHHHHHHHH
T ss_pred ECCCCCCCCCHHHHHHH
T ss_conf 60368886149988999
No 80
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.92 E-value=0.00058 Score=41.03 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=27.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 93299995897749999999999919939999
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
|.-|+|.||||+|||++|+.||..+|+.++..
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g~~~i~~ 37 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSA 37 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEECH
T ss_conf 94899989999988999999999979926721
No 81
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.92 E-value=0.00061 Score=40.86 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=27.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 3299995897749999999999919939999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
..|+|.||||+|||++|+.||..+|++++.+
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~~ 34 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLAT 34 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCEEEEH
T ss_conf 3899989999988999999999869857757
No 82
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.90 E-value=0.00057 Score=41.08 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=27.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 2999958977499999999999199399995
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
.|+|.||||+|||++|+.||..++++++...
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~~ 32 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHISTG 32 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEECHH
T ss_conf 8999889999989999999998799266153
No 83
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.89 E-value=0.00043 Score=41.92 Aligned_cols=33 Identities=30% Similarity=0.450 Sum_probs=28.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 932999958977499999999999199399995
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
++=++|.||||+|||++|+.++..++++++..+
T Consensus 6 ~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCEECHH
T ss_conf 718999899998989999999998697831036
No 84
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.87 E-value=0.011 Score=32.31 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=26.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 329999589774999999999991---993999956
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
.=|+++|.||+|||++|++|+..+ +.....++.
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~ 38 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNV 38 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 899998999999999999999999746999739745
No 85
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.86 E-value=0.00086 Score=39.88 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=28.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 3299995897749999999999919939999565211
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1021 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~ 1021 (1251)
..|+|.||||+|||++|+.||..+++.++ +..+++
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~~~i--s~gdll 41 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFELKHL--SSGDLL 41 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCCEEE--EHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCEEE--CHHHHH
T ss_conf 16999889999879999999999798687--189999
No 86
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.82 E-value=0.004 Score=35.39 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 39999999999874037825552178888993299995897749999999999
Q 000858 954 LENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 954 le~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
.+.++.++...+. .+-.+|.||||||||+++..+..
T Consensus 150 ~~~Q~~A~~~al~-----------------~~~~vI~G~pGTGKTt~i~~~l~ 185 (359)
T d1w36d1 150 INWQKVAAAVALT-----------------RRISVISGGPGTGKTTTVAKLLA 185 (359)
T ss_dssp CCHHHHHHHHHHT-----------------BSEEEEECCTTSTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHC-----------------CCEEEEECCCCCCCEEHHHHHHH
T ss_conf 6389999999970-----------------88599976898875216999999
No 87
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.81 E-value=0.0078 Score=33.42 Aligned_cols=71 Identities=21% Similarity=0.156 Sum_probs=39.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCCCC--------------------CCCCCHHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991---99399995652110--------------------0147408999999999883
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS--------------------KWFGEGEKYVKAVFSLASK 1041 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L~s--------------------~~~GesEk~Ir~iF~~A~k 1041 (1251)
+-++|.||+|+|||+.+..+|..+ +..+.-+.+-.... ................++.
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 90 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARL 90 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 68999899999889999999999997799279995443464088889999986288631112442036788889888763
Q ss_pred CCCCEEEECCCCCC
Q ss_conf 09915998442000
Q 000858 1042 IAPSVVFVDEVDSM 1055 (1251)
Q Consensus 1042 ~~PsIIfIDEID~L 1055 (1251)
..--+|+||=..+.
T Consensus 91 ~~~d~vlIDTaGr~ 104 (207)
T d1ls1a2 91 EARDLILVDTAGRL 104 (207)
T ss_dssp HTCCEEEEECCCCS
T ss_pred CCCCCEEECCCCCC
T ss_conf 36764033454420
No 88
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81 E-value=0.0007 Score=40.47 Aligned_cols=24 Identities=38% Similarity=0.690 Sum_probs=22.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
++|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 699998899971999999999999
No 89
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.78 E-value=0.00058 Score=41.02 Aligned_cols=29 Identities=28% Similarity=0.439 Sum_probs=25.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 32999958977499999999999199399
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi 1013 (1251)
+-|+|.||||+|||++|+.++.+++..++
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 08999899999989999999998099889
No 90
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.76 E-value=0.00083 Score=39.98 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=28.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 93299995897749999999999919939999565211
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1021 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~ 1021 (1251)
|.-|+|.||||+|||+.|+.||..+|+.++ +..+++
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~~~i--~~g~ll 36 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHL--SAGELL 36 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCCEEE--EHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEE--CHHHHH
T ss_conf 939999799999989999999998699267--688999
No 91
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.76 E-value=0.00084 Score=39.94 Aligned_cols=30 Identities=40% Similarity=0.651 Sum_probs=27.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 299995897749999999999919939999
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
.|+|.||||+|||++|+.|+..+++.++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEECH
T ss_conf 899988999997999999999989916725
No 92
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.74 E-value=0.00076 Score=40.23 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=28.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 299995897749999999999919939999565211
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1021 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~ 1021 (1251)
-|.|.||||+||+++|+.||+.+++++ ++..+|+
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~--iStGdLl 38 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHL--LDSGAIY 38 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEE--EEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCE--ECHHHHH
T ss_conf 899779998898999999999969908--9888999
No 93
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.73 E-value=0.00085 Score=39.90 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=29.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 32999958977499999999999199399995652110
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1022 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s 1022 (1251)
+-|+|.||||+||+++|+.||..+|++++ ++.+++.
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~i--s~g~llr 44 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHL--STGDLLR 44 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEE--EHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCEEE--ECCHHHH
T ss_conf 28999899999879999999998698468--3347899
No 94
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.73 E-value=0.00087 Score=39.82 Aligned_cols=28 Identities=43% Similarity=0.607 Sum_probs=24.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 9329999589774999999999991993
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~p 1011 (1251)
+..|+|.||||+|||++|+.++..++..
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~~ 32 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDGF 32 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTTE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf 8889998289998899999999985899
No 95
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.73 E-value=0.00077 Score=40.20 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=27.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 3299995897749999999999919939999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
.-|+|.||||+|||++|+.|+..+++.++..
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCEEEEH
T ss_conf 2899989999998999999999859908853
No 96
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.68 E-value=0.0011 Score=39.29 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=27.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 299995897749999999999919939999
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
.|+|.||||+|||++|+.||..++++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEH
T ss_conf 899988999987999999999879936638
No 97
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=96.68 E-value=0.0032 Score=36.04 Aligned_cols=69 Identities=20% Similarity=0.340 Sum_probs=47.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC--CCEEEEE-CCCCCC-------CCCCCHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 3299995897749999999999919--9399995-652110-------0147408999999999883099159984420
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG--ANFINIS-MSSITS-------KWFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg--~pfi~Id-~s~L~s-------~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID 1053 (1251)
.++|+.|++|+|||++.++++.+.. ..++.+. ..++.- ...+..+-....++..+.+..|..|++.|+-
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR 245 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR 245 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 8889994035662578999865301456233113226551111245410014654249999999743499854578667
No 98
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.67 E-value=0.0087 Score=33.11 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=27.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCC
Q ss_conf 329999589774999999999991---99399995652
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSS 1019 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~ 1019 (1251)
.-..|+||+|+|||++|..++... +..++.||...
T Consensus 61 ~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~ 98 (269)
T d1mo6a1 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH 98 (269)
T ss_dssp SEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 36999648874889999999998754898899998976
No 99
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.64 E-value=0.0012 Score=38.95 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=27.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
..|+|.||||+|||++|+.||..++++++...
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~~~ 34 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATG 34 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCEEECC
T ss_conf 69999899999989999999999699458344
No 100
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.53 E-value=0.0022 Score=37.14 Aligned_cols=62 Identities=19% Similarity=0.285 Sum_probs=37.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 99329999589774999999999991993999956521100147408999999999883099159984420
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID 1053 (1251)
.|.-||+.|+||+|||++|+.++...++.++..| .+ +.. ..+......+-... ..++||...
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~~i~~D--~~-----~~~-~~~~~~~~~~l~~g-~~vIiD~t~ 74 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRD--TL-----GSW-QRCVSSCQAALRQG-KRVVIDNTN 74 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCEEEEHH--HH-----CSH-HHHHHHHHHHHHTT-CCEEEESCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCCCEEECHH--HH-----HHH-HHHHHHHHHHHHCC-CCCEEECCC
T ss_conf 9989999899999899999999976597897607--77-----788-89999999999779-995551767
No 101
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.52 E-value=0.0013 Score=38.59 Aligned_cols=29 Identities=31% Similarity=0.629 Sum_probs=25.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 29999589774999999999991993999
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~ 1014 (1251)
-|.|.||||+|||++|+.||.+++++++.
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEC
T ss_conf 99978999879899999999996994787
No 102
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.52 E-value=0.0014 Score=38.35 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=26.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 299995897749999999999919939999
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
.|+|.||||+|||++|+.|+..+++.++..
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~ 31 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIST 31 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEECH
T ss_conf 899987999998999999999869955510
No 103
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.46 E-value=0.0021 Score=37.20 Aligned_cols=76 Identities=22% Similarity=0.306 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC--CCCCCCC
Q ss_conf 06789999874221024554222-24789988893120278981588999999998441871999846678--9999865
Q 000858 461 SDITKNVLIASTYVHLKCNNFAK-YASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL--PGGSSKE 537 (1251)
Q Consensus 461 se~tk~~L~~~~~~hL~~~~~~k-~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~~--~g~~~~e 537 (1251)
-|+.|-+|--|.|-|.+.-.+.. .-..+.+. -|||-||+| -..+.|||+||+..++|+.+.|.+.+ .|..-.+
T Consensus 19 Q~~AKk~lsvav~nhyrR~~~~~~~~~ei~ks--NILliGPTG--vGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG~D 94 (443)
T d1g41a_ 19 QADAKRAVAIALRNRWRRMQLQEPLRHEVTPK--NILMIGPTG--VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCC--CEEEECCTT--SSHHHHHHHHHHHTTCCEEEEEGGGGC----CCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CEEEECCCC--CCHHHHHHHHHHHHCCCEEEEECCEEEECCEEECC
T ss_conf 08999999999999998862365444445656--479989999--88999999999873898898625511411111044
Q ss_pred CCC
Q ss_conf 200
Q 000858 538 ADS 540 (1251)
Q Consensus 538 ~~~ 540 (1251)
.|+
T Consensus 95 Ves 97 (443)
T d1g41a_ 95 VDS 97 (443)
T ss_dssp THH
T ss_pred HHH
T ss_conf 457
No 104
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.27 E-value=0.002 Score=37.38 Aligned_cols=26 Identities=27% Similarity=0.338 Sum_probs=23.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 32999958977499999999999199
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
.-|+|.|+||+|||++|+++|..++.
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 69998899999999999999999865
No 105
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22 E-value=0.00053 Score=41.29 Aligned_cols=28 Identities=25% Similarity=0.226 Sum_probs=23.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 3299995897749999999999919939
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pf 1012 (1251)
.-|+|.|+||+|||++|+.+|..++..+
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~~~ 47 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVCHG 47 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 6999889999999999999999997447
No 106
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.20 E-value=0.021 Score=30.52 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=25.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 329999589774999999999991993999956
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~ 1017 (1251)
...+|.+|.|+|||.++..++.+.+..++.+-.
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P 41 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNP 41 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEECC
T ss_conf 889999688779999999999986993999767
No 107
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.08 E-value=0.034 Score=29.12 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=49.5
Q ss_pred CCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCC
Q ss_conf 98699974703341159336899999871399988999622578863224899975020357603322013689985522
Q 000858 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRL 783 (1251)
Q Consensus 704 ~P~Ilfi~Dve~~l~~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~l~d~~~pd~~~~~ 783 (1251)
...|++|+|++. + ..+..+.+...++....++++|+++|..+. +.
T Consensus 131 ~~~iiiide~d~-l--~~~~~~~l~~~~e~~~~~~~~Il~tn~~~~------------------------------i~-- 175 (252)
T d1sxje2 131 RYKCVIINEANS-L--TKDAQAALRRTMEKYSKNIRLIMVCDSMSP------------------------------II-- 175 (252)
T ss_dssp CCEEEEEECTTS-S--CHHHHHHHHHHHHHSTTTEEEEEEESCSCS------------------------------SC--
T ss_pred CCEEEEECCCCC-C--CCCCCHHHHCCCCCCCCCCCCEEEECCCCC------------------------------HH--
T ss_conf 724999424333-4--543111221002213566430001021110------------------------------02--
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
Q ss_conf 32345626999897631798088538834679999999
Q 000858 784 HDRSKETPKALKQISRLFPNKVTIQLPQDEALLSDWKQ 821 (1251)
Q Consensus 784 ~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlRRfer 821 (1251)
..+-.++ ..|.+.+|.++.+..++..
T Consensus 176 -----------~~l~sR~-~~i~~~~~~~~~~~~~l~~ 201 (252)
T d1sxje2 176 -----------APIKSQC-LLIRCPAPSDSEISTILSD 201 (252)
T ss_dssp -----------HHHHTTS-EEEECCCCCHHHHHHHHHH
T ss_pred -----------HHHHCCH-HEEEECCCCHHHHHHHHHH
T ss_conf -----------5442100-0243035330468999999
No 108
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.00 E-value=0.024 Score=30.18 Aligned_cols=39 Identities=23% Similarity=0.279 Sum_probs=27.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH---------CCCEEEEECCC
Q ss_conf 8899329999589774999999999991---------99399995652
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEA---------GANFINISMSS 1019 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~el---------g~pfi~Id~s~ 1019 (1251)
..+..-++|+||||+|||+++..++... +.+++.++...
T Consensus 31 i~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~ 78 (251)
T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEG 78 (251)
T ss_dssp EESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSS
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf 869969999838999889999999998631243126896399994023
No 109
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=95.66 E-value=0.024 Score=30.10 Aligned_cols=57 Identities=26% Similarity=0.359 Sum_probs=37.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 932999958977499999999999199399995652110014740899999999988309915998442000
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSM 1055 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L 1055 (1251)
.+.++|+||++||||+++.+|+..+|.. ..++... . -|..+.-..--++++||.+.-
T Consensus 104 ~n~~~l~G~~~tGKS~f~~~i~~~lg~~-~~~~~~~---~-----------~f~l~~l~~k~~~~~~e~~~~ 160 (267)
T d1u0ja_ 104 RNTIWLFGPATTGKTNIAEAIAHTVPFY-GCVNWTN---E-----------NFPFNDCVDKMVIWWEEGKMT 160 (267)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSSCE-EECCTTC---S-----------SCTTGGGSSCSEEEECSCCEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCH-HHCCCCC---C-----------CCCCCCCCCCEEEEEECCCCC
T ss_conf 1799998589887789999999983620-2002667---8-----------862200379879998388853
No 110
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=95.66 E-value=0.05 Score=27.96 Aligned_cols=136 Identities=13% Similarity=0.161 Sum_probs=65.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH-------------CCCEEEEECCCCCCCC----------CC-------------
Q ss_conf 99329999589774999999999991-------------9939999565211001----------47-------------
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA-------------GANFINISMSSITSKW----------FG------------- 1026 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el-------------g~pfi~Id~s~L~s~~----------~G------------- 1026 (1251)
|..-.+|+|++|+|||+++..+|..+ +.+++.++........ .+
T Consensus 28 pg~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~~~~~~~~Rl~~~~~~~~~~~~~~~~~~~~~ 107 (274)
T d1nlfa_ 28 AGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVADGLLI 107 (274)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSSCHHHHHHHHHHHHTTSCHHHHHHHHHHEEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEE
T ss_conf 89589999289998999999999999769972111235787368985123499999999998623686665312333232
Q ss_pred ----------CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf ----------4089999999998830991599844200014789985279999999867764068855688648999943
Q 000858 1027 ----------EGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAAT 1096 (1251)
Q Consensus 1027 ----------esEk~Ir~iF~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTT 1096 (1251)
.....+..+. .....+.+|+||.+..+.+...+ .......++..+...... .+..++++.-+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvviD~l~~~~~~~~~--~~~~~~~~~~~l~~la~~----~~~~vi~v~H~ 179 (274)
T d1nlfa_ 108 QPLIGSLPNIMAPEWFDGLK--RAAEGRRLMVLDTLRRFHIEEEN--ASGPMAQVIGRMEAIAAD----TGCSIVFLHHA 179 (274)
T ss_dssp CCCTTSCCCTTSHHHHHHHH--HHHTTCSEEEEECGGGGCCSCTT--CHHHHHHHHHHHHHHHHH----HCCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHH--HHCCCCCEEECCCHHHHCCCCCC--CHHHHHHHHHHHHHHHHC----CCCCEEHHHHC
T ss_conf 14567420357899999988--75267658962813542266523--225689999887777644----79754013100
Q ss_pred CCCCCCC------HH------HHHCCCCCCCCCCCCHHHHHH
Q ss_conf 8988873------99------982035442478999789999
Q 000858 1097 NRPFDLD------EA------VVRRLPRRLMVNLPDAPNREK 1126 (1251)
Q Consensus 1097 N~pe~Ld------~a------LlrRF~~~I~I~lPd~eeR~e 1126 (1251)
+....-. .. +..-.+.++.+..+..++..+
T Consensus 180 ~K~~~~~~~~~~~~~~~Gssai~~~a~~v~~l~r~~~~~~~~ 221 (274)
T d1nlfa_ 180 SKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEE 221 (274)
T ss_dssp --------------------CTGGGCSCEEEEEECCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCHHHHHH
T ss_conf 555444688665335642777874255899998355035554
No 111
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.61 E-value=0.0042 Score=35.22 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=24.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 2999958977499999999999199399995652
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~ 1019 (1251)
-|+|.|+||+|||++|+.++.... .+..++...
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~ 36 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNP-GFYNINRDD 36 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHST-TEEEECHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC-CCEEECHHH
T ss_conf 999989999999999999999579-979960399
No 112
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=95.43 E-value=0.013 Score=31.93 Aligned_cols=78 Identities=31% Similarity=0.462 Sum_probs=57.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-----------------CCCCCCCCEEE
Q ss_conf 7998750456887543333345544306789999874221024554222247-----------------89988893120
Q 000858 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYAS-----------------DLPTMCPRILL 497 (1251)
Q Consensus 435 ~~~~l~~~i~~~~~~~vsfd~FPYylse~tk~~L~~~~~~hL~~~~~~k~~~-----------------~l~~~~~rILL 497 (1251)
.+++|.+.|+-= ++.|.++-.|.|-|.+...+.+..+ +.++.| ||+
T Consensus 11 i~~~L~~~ViGQ---------------d~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~n--iLf 73 (364)
T d1um8a_ 11 LKAVLDNYVIGQ---------------EQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSN--ILL 73 (364)
T ss_dssp HHHHHHTTCCSC---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCC--EEE
T ss_pred HHHHHCCEECCH---------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--EEE
T ss_conf 999958962380---------------899999999999899888778876404444331111223345678753--244
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 2789815889999999984418719998466789
Q 000858 498 SGPAGSEIYQETLAKALAKHFSARLLIVDSLLLP 531 (1251)
Q Consensus 498 sgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~~~ 531 (1251)
-||.| ....-|||+||++.++++..+|.+.+-
T Consensus 74 iGPTG--vGKTElAk~LA~~~~~~~ir~D~s~~~ 105 (364)
T d1um8a_ 74 IGPTG--SGKTLMAQTLAKHLDIPIAISDATSLT 105 (364)
T ss_dssp ECCTT--SSHHHHHHHHHHHTTCCEEEEEGGGCC
T ss_pred ECCCC--CCHHHHHHHHHHHCCCCEEEHHHHHCC
T ss_conf 18998--637899999986443533111222014
No 113
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=95.38 E-value=0.062 Score=27.34 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=19.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+..-+.|.||.|+|||+|++.|+...
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99899998899980999999997127
No 114
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.33 E-value=0.036 Score=28.92 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=34.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 2483999999999987403782555217888899329999589774999999999991993999956
Q 000858 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1251)
Q Consensus 951 I~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~ 1017 (1251)
+-..+-+.+.+...+. . .+.++..|+|+|||.++-.++.+++.+.+.+..
T Consensus 69 ~~Lr~yQ~eav~~~~~----------------~-~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 69 ISLRDYQEKALERWLV----------------D-KRGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp CCCCHHHHHHHHHHTT----------------T-SEEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CCCCHHHHHHHHHHHH----------------C-CCCEEEECCCCCCEEHHHHHHHHHCCCEEEEEC
T ss_conf 9849999999999996----------------7-990999578998264377678774672457872
No 115
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.29 E-value=0.013 Score=31.83 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=31.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEECCCCC
Q ss_conf 9329999589774999999999991----9939999565211
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSIT 1021 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~el----g~pfi~Id~s~L~ 1021 (1251)
+.-|+|.|.||+|||++|++++..+ +.+++.++.-.+.
T Consensus 24 g~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR 65 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIR 65 (208)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHH
T ss_conf 869999899999989999999988777427508997536788
No 116
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.12 E-value=0.015 Score=31.51 Aligned_cols=31 Identities=29% Similarity=0.195 Sum_probs=25.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEE
Q ss_conf 29999589774999999999991---99399995
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id 1016 (1251)
-+.|.|++|+|||+|++.++.++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 8999918999899999999999997797687741
No 117
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=95.12 E-value=0.042 Score=28.50 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=21.7
Q ss_pred CCCCEEEEECCCCCHHHHHHH-HHHHHH---CCCEEEEE
Q ss_conf 899329999589774999999-999991---99399995
Q 000858 982 KPCKGILLFGPPGTGKTMLAK-AVATEA---GANFINIS 1016 (1251)
Q Consensus 982 kP~~gILL~GPpGTGKT~LAk-AIA~el---g~pfi~Id 1016 (1251)
+.....+|.+|+|+|||..+- ++.... +..++.+.
T Consensus 5 ~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~ 43 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLA 43 (140)
T ss_dssp STTCEEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 759967998179988559999999997531385156531
No 118
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.92 E-value=0.085 Score=26.45 Aligned_cols=28 Identities=29% Similarity=0.469 Sum_probs=22.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 8993299995897749999999999919
Q 000858 982 KPCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 982 kP~~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
.+..-+-|.||.|+|||+|++.|+....
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 4998999999999849999999861437
No 119
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=94.82 E-value=0.078 Score=26.68 Aligned_cols=70 Identities=19% Similarity=0.262 Sum_probs=39.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9329999589774999999999991----------------------993999956521100147408999999999883
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEA----------------------GANFINISMSSITSKWFGEGEKYVKAVFSLASK 1041 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~el----------------------g~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k 1041 (1251)
...|+|.|.+|+|||++..+|..+- +..+.-+|.+.+.... ...+.....+......
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~~~~~vs~~~~~T~~~~~~~~~~~g~~i~viDTPGl~~~~-~~~~~~~~~i~~~~~~ 110 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGG-YINDMALNIIKSFLLD 110 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSSCCCSSCEEEEEEETTEEEEEEECCCSEETT-EECHHHHHHHHHHTTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCC-CHHHHHHHHHHHHHHC
T ss_conf 748999899998699999998589841335889760467898898633889997521346775-2489999999999856
Q ss_pred CC-CCEEEECCCCC
Q ss_conf 09-91599844200
Q 000858 1042 IA-PSVVFVDEVDS 1054 (1251)
Q Consensus 1042 ~~-PsIIfIDEID~ 1054 (1251)
.. ..|+|+..++.
T Consensus 111 ~~~~~il~v~~~~~ 124 (257)
T d1h65a_ 111 KTIDVLLYVDRLDA 124 (257)
T ss_dssp CEECEEEEEEESSC
T ss_pred CCCCEEEEEEECCC
T ss_conf 89876999997888
No 120
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.81 E-value=0.0087 Score=33.10 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=22.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 32999958977499999999999199
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
+-|+|.|+||+|||++++.++..++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 88999899998989999999999987
No 121
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.66 E-value=0.02 Score=30.64 Aligned_cols=30 Identities=33% Similarity=0.459 Sum_probs=25.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 299995897749999999999919939999
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
.|+|.||+|+|||+|++.++......|...
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~~~ 31 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFGFS 31 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 199999999999999999997488760577
No 122
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.64 E-value=0.099 Score=25.99 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=54.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCC--------------EEEEECCCCCCC---CCCCHHHHHHHHHHHHHHC
Q ss_conf 329999589774999999999991-----993--------------999956521100---1474089999999998830
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA-----GAN--------------FINISMSSITSK---WFGEGEKYVKAVFSLASKI 1042 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el-----g~p--------------fi~Id~s~L~s~---~~GesEk~Ir~iF~~A~k~ 1042 (1251)
+.++|+||-..|||++.|+++-.. |+. |..+...+-... .+..--+.+..++..+.
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~-- 119 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNAT-- 119 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCC--
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC--
T ss_conf 399995467313689999879999998729767417666134420234874675343653189999999999997454--
Q ss_pred CCCEEEECCCCCCCCCCCCCCHHHHH-HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99159984420001478998527999-9999867764068855688648999943898887
Q 000858 1043 APSVVFVDEVDSMLGRRENPGEHEAM-RKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDL 1102 (1251)
Q Consensus 1043 ~PsIIfIDEID~L~~~r~~~~~~~~~-~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~L 1102 (1251)
..++++|||+-+ ..++.+.... ..++..+... ....+|.||...+..
T Consensus 120 ~~sLvliDE~~~----gT~~~eg~~l~~a~l~~l~~~---------~~~~~i~tTH~~~l~ 167 (234)
T d1wb9a2 120 EYSLVLMDEIGR----GTSTYDGLSLAWACAENLANK---------IKALTLFATHYFELT 167 (234)
T ss_dssp TTEEEEEESCCC----CSSSSHHHHHHHHHHHHHHHT---------TCCEEEEECSCGGGG
T ss_pred CCCEEEECCCCC----CCCHHHHHHHHHHHHHHHHCC---------CCCEEEEECCHHHHH
T ss_conf 660885322235----877456667898764543204---------544289852468776
No 123
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=94.63 E-value=0.022 Score=30.36 Aligned_cols=31 Identities=26% Similarity=0.229 Sum_probs=25.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHC---CCEEEEE
Q ss_conf 299995897749999999999919---9399995
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAG---ANFINIS 1016 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg---~pfi~Id 1016 (1251)
=++|.|+||+|||++++.++..++ +.+..+.
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~ 36 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9999898998989999999999987699889997
No 124
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=94.40 E-value=0.11 Score=25.63 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=21.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 993299995897749999999999919
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
+...+-|.||+|+|||+|++.++..+.
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 999999999999989999999973578
No 125
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=94.31 E-value=0.038 Score=28.77 Aligned_cols=57 Identities=21% Similarity=0.329 Sum_probs=37.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 32999958977499999999999199399995652110014740899999999988309915998442000
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSM 1055 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L 1055 (1251)
+.++|+|||+||||++|.+|++-++-.++...-.. + -|....-..--|+++||+...
T Consensus 54 n~i~~~GP~~TGKS~f~~sl~~~l~G~vis~~N~~--s------------~F~Lq~l~~~kv~l~dD~t~~ 110 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNST--S------------HFWLEPLTDTKVAMLDDATTT 110 (205)
T ss_dssp SEEEEESCGGGCHHHHHHHHHHHHTCEECCCCCSS--S------------CGGGGGGTTCSSEEEEEECHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCC--C------------CCCCCCCCCCEEEEEECCCCC
T ss_conf 18999889985689999999998288788336788--8------------753665347869999605531
No 126
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.31 E-value=0.12 Score=25.50 Aligned_cols=57 Identities=19% Similarity=0.283 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHHHH
Q ss_conf 998888411248399999999998740378255521788--889932999958977499999
Q 000858 942 SDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTMLA 1001 (1251)
Q Consensus 942 ~e~~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i--~kP~~gILL~GPpGTGKT~LA 1001 (1251)
.++..+|++++-.+.+.+.|.+. .+.+|....+..+ ....+.+++..|+|+|||+..
T Consensus 8 ~e~i~sF~~l~L~~~l~~~L~~~---g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 8 NEIVDSFDDMNLSESLLRGIYAY---GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCCCCCGGGSCCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHH
T ss_pred CCCCCCHHHCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
T ss_conf 88558987879799999999988---999999999999999976998899725625445543
No 127
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.21 E-value=0.049 Score=28.06 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=24.2
Q ss_pred EEEECCCCCHHHHHHHHHHHHHC---CCEEEEEC
Q ss_conf 99995897749999999999919---93999956
Q 000858 987 ILLFGPPGTGKTMLAKAVATEAG---ANFINISM 1017 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~elg---~pfi~Id~ 1017 (1251)
|-|.||+|+|||++|+.++..++ .....++.
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~ 58 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFHM 58 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 9978988789999999999983634665200122
No 128
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.00 E-value=0.028 Score=29.69 Aligned_cols=29 Identities=38% Similarity=0.508 Sum_probs=24.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 29999589774999999999991993999
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~ 1014 (1251)
.|+|.||+|+|||+|++.++.+....|..
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~~~ 31 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSFGF 31 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 69998999999899999999748866247
No 129
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=93.91 E-value=0.14 Score=24.98 Aligned_cols=27 Identities=30% Similarity=0.462 Sum_probs=21.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 993299995897749999999999919
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
+..-+-|.||.|+|||+|++.|+.-..
T Consensus 28 ~Ge~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 998999999999809999999964878
No 130
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.91 E-value=0.14 Score=24.98 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=20.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
+.|+|.|++|+|||+|..++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 98999999998989999999809
No 131
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=93.46 E-value=0.17 Score=24.47 Aligned_cols=22 Identities=32% Similarity=0.576 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|+||+|||+|..++...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999899999899999999688
No 132
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=93.44 E-value=0.17 Score=24.45 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=22.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 993299995897749999999999919
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
+...+-|.||+|+|||+|++.++....
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999999999999859999999862168
No 133
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.44 E-value=0.17 Score=24.45 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
-|.|.|.+|+|||+|..++...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999999999999999688
No 134
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=93.38 E-value=0.17 Score=24.39 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 678999987422102455422224789988893120278981588999999998441871999846678
Q 000858 462 DITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1251)
Q Consensus 462 e~tk~~L~~~~~~hL~~~~~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~~ 530 (1251)
|+.+..+..+.+.|... +. +-...-.-+||.||+| ..++.|||+||+.++.++..+|.+.+
T Consensus 28 ~~a~~~v~~~v~~~~~~--l~----~~~~p~~~~lf~Gp~G--vGKT~lak~la~~l~~~~i~~d~s~~ 88 (315)
T d1r6bx3 28 DKAIEALTEAIKMARAG--LG----HEHKPVGSFLFAGPTG--VGKTEVTVQLSKALGIELLRFDMSEY 88 (315)
T ss_dssp HHHHHHHHHHHHHHHTT--CS----CTTSCSEEEEEECSTT--SSHHHHHHHHHHHHTCEEEEEEGGGC
T ss_pred HHHHHHHHHHHHHHHCC--CC----CCCCCCEEEEEECCCC--CHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99999999999999726--78----8888765899977875--00699999998633677067415444
No 135
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.32 E-value=0.17 Score=24.33 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=21.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 329999589774999999999991---993999956
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
+.+++.+|+|+|||..+-..+... +..++.+..
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~P 94 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFP 94 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 977999268976999999999999874583899944
No 136
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=93.08 E-value=0.024 Score=30.19 Aligned_cols=37 Identities=14% Similarity=0.071 Sum_probs=31.6
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 889312027898158899999999844187199984667
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~ 529 (1251)
-+++|++.||+| ....+|||+||++|+.+.+..+...
T Consensus 6 ~~K~I~i~G~~G--sGKTTla~~La~~~~~~~i~~~~~~ 42 (192)
T d1lw7a2 6 FAKTVAILGGES--SGKSVLVNKLAAVFNTTSAWEYGRE 42 (192)
T ss_dssp TCEEEEEECCTT--SHHHHHHHHHHHHTTCEEECCTTHH
T ss_pred CCEEEEEECCCC--CCHHHHHHHHHHHHCCCEEEEEHHH
T ss_conf 632899989999--9899999999998499867531677
No 137
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.05 E-value=0.057 Score=27.59 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=22.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8899329999589774999999999991
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
..+..-++|+||||+|||++|..++...
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7689799998899887889999999999
No 138
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.96 E-value=0.2 Score=23.98 Aligned_cols=23 Identities=35% Similarity=0.651 Sum_probs=20.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|+|.|+||+|||+|..++.+.-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999988999999996799
No 139
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=92.80 E-value=0.21 Score=23.83 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=21.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+..-+-|.||.|+|||+|.+.|+.-.
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCCCHHHHHCCCCC
T ss_conf 99799998899998216557506887
No 140
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=92.58 E-value=0.049 Score=28.05 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=16.7
Q ss_pred CEEEEECCCCCHHHH-HHHHHHHHH
Q ss_conf 329999589774999-999999991
Q 000858 985 KGILLFGPPGTGKTM-LAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~-LAkAIA~el 1008 (1251)
..+|+.|+||||||+ |+..++..+
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9989995298668999999999999
No 141
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=92.54 E-value=0.064 Score=27.28 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=26.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 9329999589774999999999991993999956
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~ 1017 (1251)
.+++||.|++|+|||++|-++... |+.++.=|.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~DD~ 46 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIADDR 46 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEEEEE
T ss_pred CEEEEEEECCCCCHHHHHHHHHHC-CCEEEECCE
T ss_conf 999999808999989999999985-991981686
No 142
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.50 E-value=0.057 Score=27.61 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=23.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 8899329999589774999999999991
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
..+..-++|+||||+|||.++..+|...
T Consensus 20 i~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 8599799999589999999999999999
No 143
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.46 E-value=0.051 Score=27.93 Aligned_cols=36 Identities=31% Similarity=0.337 Sum_probs=26.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---------CCCEEEEECC
Q ss_conf 99329999589774999999999991---------9939999565
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA---------GANFINISMS 1018 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el---------g~pfi~Id~s 1018 (1251)
+..-++|+||||+|||+++-.++... +..++.+...
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~ 79 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTE 79 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECC
T ss_conf 887999985898988999999999863448763889628998310
No 144
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=92.29 E-value=0.21 Score=23.81 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=29.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEECCCC
Q ss_conf 88993299995897749999999999919-----93999956521
Q 000858 981 TKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSSI 1020 (1251)
Q Consensus 981 ~kP~~gILL~GPpGTGKT~LAkAIA~elg-----~pfi~Id~s~L 1020 (1251)
.+.|--|-|.|++|+|||++|+.++..+. ..+..+++-.+
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 899889999689999876899999999730468996599952156
No 145
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.25 E-value=0.24 Score=23.37 Aligned_cols=28 Identities=25% Similarity=0.434 Sum_probs=22.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 9932999958977499999999999199
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
+..-+-|.||.|+|||+|.+.|+.-...
T Consensus 25 ~Gei~~liGpsGsGKSTLl~~i~Gl~~p 52 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTLLRMIAGLETI 52 (232)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9989999989998299999999658788
No 146
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.21 E-value=0.14 Score=24.94 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=20.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|++.|++|+|||+|...+....
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999979989999999998098
No 147
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=92.16 E-value=0.11 Score=25.69 Aligned_cols=22 Identities=32% Similarity=0.510 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|...+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHCCC
T ss_conf 9999999998999999998089
No 148
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.16 E-value=0.058 Score=27.54 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=22.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 29999589774999999999991993
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGAN 1011 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~p 1011 (1251)
-|-|.|++|+|||++|+.++..++..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCHH
T ss_conf 99998999787999999999996410
No 149
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.16 E-value=0.12 Score=25.51 Aligned_cols=32 Identities=22% Similarity=0.167 Sum_probs=25.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 29999589774999999999991---993999956
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
-+-+.|++|+|||+|+..++.++ |..+..+..
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~ 37 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKH 37 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 99998099998999999999999867983799983
No 150
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=92.09 E-value=0.021 Score=30.60 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=31.1
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 3120278981588999999998441871999846678
Q 000858 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1251)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~~~ 530 (1251)
.|||.|||| ....+||+|||..++..++.++...+
T Consensus 34 ~ilL~GpPG--tGKT~la~~la~~~~~~~~~i~~d~~ 68 (273)
T d1gvnb_ 34 AFLLGGQPG--SGKTSLRSAIFEETQGNVIVIDNDTF 68 (273)
T ss_dssp EEEEECCTT--SCTHHHHHHHHHHTTTCCEEECTHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHHCCEEEEECHHH
T ss_conf 999889799--88999999999986515489832899
No 151
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=92.07 E-value=0.25 Score=23.23 Aligned_cols=28 Identities=25% Similarity=0.445 Sum_probs=22.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 9932999958977499999999999199
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
+..-+-|.||.|+|||++.+.|+.-...
T Consensus 25 ~Ge~~~liGpsGaGKSTll~~l~Gl~~p 52 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTLFLELIAGFHVP 52 (229)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 9989999989998299999999647688
No 152
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.06 E-value=0.058 Score=27.55 Aligned_cols=25 Identities=20% Similarity=0.474 Sum_probs=22.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 3299995897749999999999919
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
+=|+|.||+|+||+++++.+..+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 4999989999999999999984589
No 153
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=92.04 E-value=0.095 Score=26.12 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=25.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 899329999589774999999999991993
Q 000858 982 KPCKGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1251)
Q Consensus 982 kP~~gILL~GPpGTGKT~LAkAIA~elg~p 1011 (1251)
+|+.-|+|.|+=|+|||++++.+++.+|..
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 998299996687765889999987642234
No 154
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=91.97 E-value=0.054 Score=27.76 Aligned_cols=37 Identities=27% Similarity=0.214 Sum_probs=32.2
Q ss_pred CCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 888931202789815889999999984418719998466
Q 000858 490 TMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1251)
Q Consensus 490 ~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~ 528 (1251)
|-.+.+||.|||| ....++|+|||++++.+++.++.+
T Consensus 152 ~~~~~~~~~g~~~--~gk~~~~~~~~~~~~~~~i~in~s 188 (362)
T d1svma_ 152 PKKRYWLFKGPID--SGKTTLAAALLELCGGKALNVNLP 188 (362)
T ss_dssp TTCCEEEEECSTT--SSHHHHHHHHHHHHCCEEECCSSC
T ss_pred CCCCEEEEECCCC--CCHHHHHHHHHHHCCCCEEEEECC
T ss_conf 9767699989999--888999999999859978999774
No 155
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=91.91 E-value=0.27 Score=23.11 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=19.8
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+..-+-|.||.|+|||+|++.++...
T Consensus 27 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99999999999997999999999960
No 156
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.78 E-value=0.27 Score=23.01 Aligned_cols=28 Identities=29% Similarity=0.440 Sum_probs=22.6
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 9932999958977499999999999199
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
+..-+-|.||.|+|||+|.+.|+.....
T Consensus 31 ~Ge~~~liGpsGaGKSTLl~~i~Gl~~p 58 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTTTLRMIAGLEEP 58 (239)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9989999999998299999999758999
No 157
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.75 E-value=0.28 Score=22.99 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=23.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 8993299995897749999999999919
Q 000858 982 KPCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 982 kP~~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
.+..-+-|.||.|+|||+|++.|+..+.
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 5999999998999829999999957974
No 158
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.48 E-value=0.29 Score=22.81 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=20.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
..|++.|.+|+|||+|..++...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998989999999668
No 159
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=91.45 E-value=0.3 Score=22.79 Aligned_cols=23 Identities=48% Similarity=0.619 Sum_probs=19.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
..|++.|++|+|||+|...+...
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998999999999648
No 160
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=91.41 E-value=0.072 Score=26.91 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=16.5
Q ss_pred CEEEEECCCCCHHHHH-HHHHHHH
Q ss_conf 3299995897749999-9999999
Q 000858 985 KGILLFGPPGTGKTML-AKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~L-AkAIA~e 1007 (1251)
..+|+.|+||||||++ +..++..
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~l 38 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHL 38 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 998999628843899999999999
No 161
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=91.36 E-value=0.3 Score=22.73 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|+|.|++|+|||+|...+...-
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999989899999997197
No 162
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=91.35 E-value=0.26 Score=23.18 Aligned_cols=16 Identities=31% Similarity=0.378 Sum_probs=14.1
Q ss_pred CEEEEECCCCCHHHHH
Q ss_conf 3299995897749999
Q 000858 985 KGILLFGPPGTGKTML 1000 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~L 1000 (1251)
+.+++..|.|+|||+.
T Consensus 39 ~dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 39 ESMVGQSQTGTGKTHA 54 (209)
T ss_dssp CCEEEECCSSHHHHHH
T ss_pred CCEEEECCCCCCCCEE
T ss_conf 9768662444213314
No 163
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=91.28 E-value=0.31 Score=22.68 Aligned_cols=67 Identities=25% Similarity=0.233 Sum_probs=37.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH-----CCCE--------------EEEECCCCCCCCCCCHH---HHHHHHHHHHHHCC
Q ss_conf 29999589774999999999991-----9939--------------99956521100147408---99999999988309
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA-----GANF--------------INISMSSITSKWFGEGE---KYVKAVFSLASKIA 1043 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el-----g~pf--------------i~Id~s~L~s~~~GesE---k~Ir~iF~~A~k~~ 1043 (1251)
-++|.||-..|||++.++++-.. |+.+ ..+...+-......... +.++.++..+ ..
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~--~~ 114 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEA--TE 114 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHC--CT
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC--CC
T ss_conf 7999788734532345565899999852504613751994011699998777602378307898678898775028--97
Q ss_pred CCEEEECCCCC
Q ss_conf 91599844200
Q 000858 1044 PSVVFVDEVDS 1054 (1251)
Q Consensus 1044 PsIIfIDEID~ 1054 (1251)
.+.++|||+-+
T Consensus 115 ~sLvliDE~~~ 125 (224)
T d1ewqa2 115 NSLVLLDEVGR 125 (224)
T ss_dssp TEEEEEESTTT
T ss_pred CCEEEECCCCC
T ss_conf 72785545456
No 164
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.24 E-value=0.31 Score=22.65 Aligned_cols=26 Identities=27% Similarity=0.471 Sum_probs=21.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+..-+-|.||.|+|||++.+.|+.-.
T Consensus 30 ~Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99899999899980999999997586
No 165
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=91.17 E-value=0.11 Score=25.79 Aligned_cols=31 Identities=26% Similarity=0.437 Sum_probs=24.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 99329999589774999999999991993999
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~pfi~ 1014 (1251)
...++||.|++|.|||++|-++... |..++.
T Consensus 14 ~g~gvli~G~sg~GKS~la~~l~~~-g~~li~ 44 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALELIKR-GHRLVA 44 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT-TCEEEE
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHC-CCEEEE
T ss_conf 9999999808999999999999984-993881
No 166
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=91.10 E-value=0.16 Score=24.68 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=37.8
Q ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC--------HHHHHCCCCCC
Q ss_conf 9915998442000147899852799999998677640688556886489999438988873--------99982035442
Q 000858 1043 APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLD--------EAVVRRLPRRL 1114 (1251)
Q Consensus 1043 ~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld--------~aLlrRF~~~I 1114 (1251)
.|..+++||+..+..-. .+..++...++ ..+.++.++-.+..|. ..++.-+...+
T Consensus 276 ~~v~l~lDE~~~~~~~~-----------~l~~~l~~~Rk------~Gv~~~l~~Qs~~ql~~~yg~~~a~~i~~n~~t~i 338 (433)
T d1e9ra_ 276 RRLWLFIDELASLEKLA-----------SLADALTKGRK------AGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLV 338 (433)
T ss_dssp CCEEEEESCGGGSCBCS-----------SHHHHHHHCTT------TTEEEEEEESCHHHHHHHHCHHHHHHHHTTCCEEE
T ss_pred CCEEEEECHHHHHCCCH-----------HHHHHHHHHCC------CCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 85499835375525608-----------79999998478------99159999364889999873889999998468589
Q ss_pred CCC--CCCHHHHHHHHHHHHHH
Q ss_conf 478--99978999999999952
Q 000858 1115 MVN--LPDAPNREKIIRVILAK 1134 (1251)
Q Consensus 1115 ~I~--lPd~eeR~eILk~ll~k 1134 (1251)
.+. .++.+. .+.+..++.+
T Consensus 339 ~~~~~~~d~~t-ae~~s~~~G~ 359 (433)
T d1e9ra_ 339 VLGGSRTDPKT-NEDMSLSLGE 359 (433)
T ss_dssp EEECCTTCHHH-HHHHHHHHCE
T ss_pred EECCCCCCHHH-HHHHHHHHCC
T ss_conf 95378888899-9999997298
No 167
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=91.03 E-value=0.089 Score=26.32 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=26.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 99329999589774999999999991993999956
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~ 1017 (1251)
...++||.|++|+|||++|-++.. .|+.++.=|.
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~~-~G~~lvaDD~ 47 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLIN-KNHLFVGDDA 47 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHT-TTCEEEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH-CCCCEECCCE
T ss_conf 999999981899998999999998-5974165876
No 168
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=90.92 E-value=0.33 Score=22.45 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=21.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 3299995897749999999999919
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
.-+-|.||.|+|||+|++.|+.-..
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 7999989998988899998758863
No 169
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=90.85 E-value=0.34 Score=22.41 Aligned_cols=23 Identities=26% Similarity=0.359 Sum_probs=20.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|+|.|+||+|||+|...+...-
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999989899999996598
No 170
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=90.82 E-value=0.18 Score=24.18 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=23.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHH--CCCEEEEE
Q ss_conf 9999589774999999999991--99399995
Q 000858 987 ILLFGPPGTGKTMLAKAVATEA--GANFINIS 1016 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~el--g~pfi~Id 1016 (1251)
+++.|++|+|||+|..++.+.+ +.....++
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~ivn 34 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVN 34 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCEEEEEE
T ss_conf 99991899839999999999884387689996
No 171
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.74 E-value=0.34 Score=22.34 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=25.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH------CCCEEEEECCCC
Q ss_conf 329999589774999999999991------993999956521
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA------GANFINISMSSI 1020 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el------g~pfi~Id~s~L 1020 (1251)
-=|-|.|++|+|||+++..|...+ ...+..++.-++
T Consensus 28 ~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 28 LFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 899837998788999999999999987277860676356777
No 172
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=90.53 E-value=0.18 Score=24.19 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=24.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 3299995897749999999999919939999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
.=|-|+|++|+|||++|+.+ .+.|++++..
T Consensus 4 ~IIgitG~~gSGKstva~~l-~~~g~~~~~~ 33 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALL-RSWGYPVLDL 33 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHH-HHTTCCEEEH
T ss_pred EEEEEECCCCCCHHHHHHHH-HHCCCEEEEC
T ss_conf 89999898877899999999-9879909986
No 173
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.52 E-value=0.27 Score=23.11 Aligned_cols=22 Identities=32% Similarity=0.569 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|+..+.+.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999997999999999849
No 174
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.44 E-value=0.29 Score=22.85 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=26.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 29999589774999999999991---9939999565
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s 1018 (1251)
=|.|.|+.|+|||++++.++..+ |.+++.+.-+
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~~p 40 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 40 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 999989988899999999999998779968999689
No 175
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.32 E-value=0.37 Score=22.13 Aligned_cols=23 Identities=22% Similarity=0.372 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|++.|.+|+|||+|+..+...-
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~~ 30 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQSY 30 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999979969899999997399
No 176
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.16 E-value=0.18 Score=24.26 Aligned_cols=28 Identities=25% Similarity=0.548 Sum_probs=23.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 3299995897749999999999919939
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pf 1012 (1251)
+-|+|.||+|+||++|++.++.+..-.|
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCCE
T ss_conf 7199999899999999999997097676
No 177
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.15 E-value=0.39 Score=22.01 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=24.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCCEEEEECCC
Q ss_conf 329999589774999999999991-----99399995652
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSS 1019 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el-----g~pfi~Id~s~ 1019 (1251)
..|||.|..|+|||+|.+.+...- |+....++...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~~~~pTiG~~~~~~~~~~ 46 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDK 46 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHCCCCCSCEEEEEEETT
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECC
T ss_conf 7799998999988999998950982788886789999776
No 178
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=90.08 E-value=0.39 Score=21.98 Aligned_cols=29 Identities=28% Similarity=0.353 Sum_probs=22.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99329999589774999999999991993
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~p 1011 (1251)
+..-+-|.||.|+|||+|.+.|+......
T Consensus 27 ~Gei~glvG~nGaGKSTLl~~l~G~~~p~ 55 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTTLRIISTLIKPS 55 (238)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSCCS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 89799999999999999999996698878
No 179
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=89.98 E-value=0.12 Score=25.43 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=21.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 3299995897749999999999919
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
+=++|.||+|+||++|.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0999999999999999999986398
No 180
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=89.77 E-value=0.14 Score=25.00 Aligned_cols=26 Identities=19% Similarity=0.171 Sum_probs=22.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+..-++|.|+||+|||.++..+|..+
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 88599999179999899999999999
No 181
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.69 E-value=0.42 Score=21.77 Aligned_cols=31 Identities=39% Similarity=0.608 Sum_probs=20.1
Q ss_pred CEEEEECCCCCHHHHHHHH-HHHHH--CCCEEEE
Q ss_conf 3299995897749999999-99991--9939999
Q 000858 985 KGILLFGPPGTGKTMLAKA-VATEA--GANFINI 1015 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkA-IA~el--g~pfi~I 1015 (1251)
+.+++.+|+|+|||..+.. +...+ +..++.+
T Consensus 41 ~~~il~apTGsGKT~~a~l~i~~~~~~~~~vl~l 74 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYV 74 (202)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 9989986899851178999999876225760331
No 182
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=89.65 E-value=0.42 Score=21.75 Aligned_cols=60 Identities=25% Similarity=0.271 Sum_probs=35.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCC--EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 9329999589774999999999991993--999956521100147408999999999883099159984420001
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGAN--FINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML 1056 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~p--fi~Id~s~L~s~~~GesEk~Ir~iF~~A~k~~PsIIfIDEID~L~ 1056 (1251)
..-+-|.||.|+|||+|.+.|+...... -+.++..++... .... .++ .+|.|++.-..++
T Consensus 32 Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~----~~~~------~~r---~gi~~~~q~~~l~ 93 (240)
T d1ji0a_ 32 GQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNK----PAHV------INR---MGIALVPEGRRIF 93 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTC----CHHH------HHH---TTEEEECSSCCCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCC----CHHH------HHH---HCCCCCCCCCCCC
T ss_conf 979999999998599999999678888803898424434466----0888------887---4235567655457
No 183
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=89.59 E-value=0.17 Score=24.35 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
..|++.|++|+|||+|...+...
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998789999998448
No 184
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=89.55 E-value=0.31 Score=22.63 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=26.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 9999589774999999999991---9939999565
Q 000858 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s 1018 (1251)
|.|.|..|+|||++++.++..+ |.+++.+.-+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 99989987899999999999998789978998659
No 185
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=89.24 E-value=0.31 Score=22.66 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 54333334554430678999987422102455422224789988893120278981588999999998441871
Q 000858 448 NIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSAR 521 (1251)
Q Consensus 448 ~~~vsfd~FPYylse~tk~~L~~~~~~hL~~~~~~k~~~~l~~~~~rILLsgp~GsE~Yqe~LaKALA~~f~a~ 521 (1251)
+.+.||||| +..+.-+.+...+-- +..+..+...-+.|.||+| ....-|+.|+++++..+
T Consensus 4 n~~~tFdnF--~vg~~N~~a~~~~~~----------~~~~~~~~~n~l~l~G~~G--~GKTHLl~A~~~~~~~~ 63 (213)
T d1l8qa2 4 NPKYTLENF--IVGEGNRLAYEVVKE----------ALENLGSLYNPIFIYGSVG--TGKTHLLQAAGNEAKKR 63 (213)
T ss_dssp CTTCCSSSC--CCCTTTHHHHHHHHH----------HHHTTTTSCSSEEEECSSS--SSHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHC--CCCCCHHHHHHHHHH----------HHHCCCCCCCCEEEECCCC--CCHHHHHHHHHHHHCCC
T ss_conf 888976531--377749999999999----------9867687788579988899--83999999999874467
No 186
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=89.21 E-value=0.19 Score=24.02 Aligned_cols=15 Identities=33% Similarity=0.423 Sum_probs=7.9
Q ss_pred CEEEEECCCCCHHHH
Q ss_conf 329999589774999
Q 000858 985 KGILLFGPPGTGKTM 999 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~ 999 (1251)
+.+|+.+|+|+|||+
T Consensus 10 ~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 10 RLTIMDLHPGAGKTK 24 (305)
T ss_dssp CEEEECCCTTSSTTT
T ss_pred CCEEEEECCCCCHHH
T ss_conf 949999799997879
No 187
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=89.19 E-value=0.45 Score=21.56 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=27.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 99329999589774999999999991---993999956
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
.++-+++.|.-|+|||+++.++|..+ |..+.-+++
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 98599997998674999999999999978997899957
No 188
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.65 E-value=0.39 Score=21.97 Aligned_cols=34 Identities=26% Similarity=0.229 Sum_probs=28.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 3299995897749999999999919939999565
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1018 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s 1018 (1251)
+=|.|.|+-|+|||++++.++..+...+..+.-+
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~p 37 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFP 37 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTTSEEEEESS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 8999989988869999999999997197799978
No 189
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=88.49 E-value=0.51 Score=21.22 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=27.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---C--CCEEEEECCC
Q ss_conf 329999589774999999999991---9--9399995652
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---G--ANFINISMSS 1019 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g--~pfi~Id~s~ 1019 (1251)
..|=|.||||+|||+|..+++..+ + .-++.+|.+.
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss 91 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 5986117998889999999999876368751344346554
No 190
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=87.97 E-value=0.16 Score=24.64 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=25.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 9932999958977499999999999199399
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~pfi 1013 (1251)
.|.-|.|.|+.|+|||++++.|++.++...+
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 8619998899998889999999987078678
No 191
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.96 E-value=0.34 Score=22.40 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=25.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 932999958977499999999999199399
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~elg~pfi 1013 (1251)
|+-|.|.|+-|+|||++++.++..+....+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 819999899888599999999998730387
No 192
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.93 E-value=0.55 Score=20.99 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|.+|+|||+|...+...
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998993999999999719
No 193
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=87.91 E-value=0.18 Score=24.19 Aligned_cols=29 Identities=38% Similarity=0.597 Sum_probs=23.6
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 999958977499999999999199399995
Q 000858 987 ILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
|-|+|++|+|||++++.+. ..|++++..|
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vidaD 34 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVIDAD 34 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEEHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCCEEECH
T ss_conf 9978988688999999999-8799199743
No 194
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=87.53 E-value=0.17 Score=24.47 Aligned_cols=29 Identities=28% Similarity=0.489 Sum_probs=24.0
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 999958977499999999999199399995
Q 000858 987 ILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
|-|+|+.|+|||++|+.+. +.|++++..|
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vidaD 33 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDAD 33 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCEEEECH
T ss_conf 9988888788999999999-8799399746
No 195
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.51 E-value=0.58 Score=20.83 Aligned_cols=22 Identities=41% Similarity=0.751 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|.+|+|||+|+..+...
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999898993999999998188
No 196
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=87.11 E-value=0.35 Score=22.29 Aligned_cols=73 Identities=21% Similarity=0.211 Sum_probs=48.0
Q ss_pred CCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCC
Q ss_conf 89869997470334115933689999987139998899962257886322489997502035760332201368998552
Q 000858 703 SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSR 782 (1251)
Q Consensus 703 ~~P~Ilfi~Dve~~l~~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~l~d~~~pd~~~~ 782 (1251)
..+.|++|+|++..... ....|...++.-..++++|+.+|+.+. +
T Consensus 108 ~~~~iilide~d~~~~~---~~~~ll~~l~~~~~~~~~i~~~n~~~~------------------------------i-- 152 (231)
T d1iqpa2 108 ASFKIIFLDEADALTQD---AQQALRRTMEMFSSNVRFILSCNYSSK------------------------------I-- 152 (231)
T ss_dssp CSCEEEEEETGGGSCHH---HHHHHHHHHHHTTTTEEEEEEESCGGG------------------------------S--
T ss_pred CCCEEEEEHHHHHCCHH---HHHHHHHHCCCCCCCEEEEECCCCHHH------------------------------C--
T ss_conf 87228861434431214---789876411247764478861487665------------------------------6--
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
Q ss_conf 2323456269998976317980885388346799999999
Q 000858 783 LHDRSKETPKALKQISRLFPNKVTIQLPQDEALLSDWKQQ 822 (1251)
Q Consensus 783 ~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlRRferq 822 (1251)
++.+-.++ ..+.+.+|.++.+..+..+.
T Consensus 153 -----------~~~l~sR~-~~i~~~~~~~~~~~~~l~~~ 180 (231)
T d1iqpa2 153 -----------IEPIQSRC-AIFRFRPLRDEDIAKRLRYI 180 (231)
T ss_dssp -----------CHHHHHTE-EEEECCCCCHHHHHHHHHHH
T ss_pred -----------HHHHHCCC-CCCCCCCCCHHHHHHHHHHH
T ss_conf -----------57684731-21012334304677899888
No 197
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=87.02 E-value=0.62 Score=20.64 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=26.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH---C--CCEEEEECCC
Q ss_conf 9329999589774999999999991---9--9399995652
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEA---G--ANFINISMSS 1019 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~el---g--~pfi~Id~s~ 1019 (1251)
...|=|.||||+|||+|..+++..+ | .-++.++.+.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss 94 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 94 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCE
T ss_conf 32897438999989999999999997569833220377761
No 198
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=86.86 E-value=0.63 Score=20.59 Aligned_cols=24 Identities=38% Similarity=0.606 Sum_probs=21.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
..++|+|++|+|||.|+..+++..
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 755686799988789999999977
No 199
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.42 E-value=0.56 Score=20.95 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=23.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH------CCCEEEEECCC
Q ss_conf 29999589774999999999991------99399995652
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA------GANFINISMSS 1019 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el------g~pfi~Id~s~ 1019 (1251)
-|+|.|.+|+|||+|...+.-.- |+.+..++...
T Consensus 4 KivllG~~~vGKTsll~r~~f~~~~~pTiG~~~~~~~~~~ 43 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMRIIHGQDPTKGIHEYDFEIKN 43 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCCSSEEEEEEEETT
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEE
T ss_conf 9999989999989999988468988872414999996014
No 200
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=86.00 E-value=0.69 Score=20.29 Aligned_cols=25 Identities=20% Similarity=0.430 Sum_probs=20.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9932999958977499999999999
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
|...|++.|.+|+|||+|+..+...
T Consensus 3 ~~~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 3 ALHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 5269999998995889999999729
No 201
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=85.93 E-value=0.29 Score=22.88 Aligned_cols=23 Identities=30% Similarity=0.358 Sum_probs=21.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
=|.|.|+.|+|||++++.++..+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998998887999999999999
No 202
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=85.67 E-value=0.41 Score=21.86 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=30.6
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 8931202789815889999999984418719998466
Q 000858 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1251)
Q Consensus 492 ~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~ 528 (1251)
++=|+|+||+| -.+.++||+||+.|+.+.+.+|.-
T Consensus 3 ~kiI~l~G~~G--sGKsTva~~L~~~l~~~~~~~~~d 37 (178)
T d1qhxa_ 3 TRMIILNGGSS--AGKSGIVRCLQSVLPEPWLAFGVD 37 (178)
T ss_dssp CCEEEEECCTT--SSHHHHHHHHHHHSSSCEEEEEHH
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHCCCCEEEEECC
T ss_conf 85999989999--998999999999728996996141
No 203
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.61 E-value=0.73 Score=20.17 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=20.2
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|.|.|.||+|||+|..++..+-
T Consensus 2 kI~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999999999999995899
No 204
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.61 E-value=0.73 Score=20.17 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|.+|+|||+|...+...
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999999997999999999739
No 205
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.44 E-value=0.32 Score=22.58 Aligned_cols=22 Identities=23% Similarity=0.459 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.+++.|++|+|||+|+..+.+.
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999993999999999629
No 206
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=85.31 E-value=0.29 Score=22.80 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=24.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 299995897749999999999919939999565
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMS 1018 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s 1018 (1251)
-|-|+|+.|+||+++|+.++...|+. .++++
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~~--~i~~a 33 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSAV--KYQLA 33 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCEE--ECCTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCE--EECCC
T ss_conf 99997999988999999999868985--98052
No 207
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.01 E-value=0.65 Score=20.50 Aligned_cols=22 Identities=41% Similarity=0.545 Sum_probs=19.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|...+...
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990889999999849
No 208
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=84.84 E-value=0.79 Score=19.93 Aligned_cols=25 Identities=28% Similarity=0.494 Sum_probs=18.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 3299995897749999999999919
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
.-+-|.||.|+|||+|++.|+....
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 7999999999849999999977976
No 209
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=84.75 E-value=0.33 Score=22.50 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=23.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCC--EEEEECCC
Q ss_conf 9999589774999999999991993--99995652
Q 000858 987 ILLFGPPGTGKTMLAKAVATEAGAN--FINISMSS 1019 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~elg~p--fi~Id~s~ 1019 (1251)
+-|.||.|+|||+|.+.|+...... -+.++..+
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~ 61 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGAD 61 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEE
T ss_pred EEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf 99997999809999999973999896289999999
No 210
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=84.74 E-value=0.32 Score=22.52 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=19.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 93299995897749999999999
Q 000858 984 CKGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
...|+|.|++|+|||+|..++..
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 77899999999898999999967
No 211
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.70 E-value=0.8 Score=19.90 Aligned_cols=36 Identities=31% Similarity=0.319 Sum_probs=25.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHH---HCCCEEEEECCC
Q ss_conf 932999958977499999999999---199399995652
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATE---AGANFINISMSS 1019 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~e---lg~pfi~Id~s~ 1019 (1251)
+..-||+|..|+|||.++-..+.. .|..+..+-..+
T Consensus 104 ~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~ 142 (264)
T d1gm5a3 104 PMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTS 142 (264)
T ss_dssp CCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHH
T ss_conf 531566635355665999999999885135505874047
No 212
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.58 E-value=0.81 Score=19.86 Aligned_cols=22 Identities=27% Similarity=0.449 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|+..+.+.
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999619
No 213
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.38 E-value=0.38 Score=22.07 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|+||+|||+|...+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999589
No 214
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=83.87 E-value=0.86 Score=19.66 Aligned_cols=28 Identities=32% Similarity=0.436 Sum_probs=22.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 9932999958977499999999999199
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
+..-+.|.||.|+|||+|.+.|+..+..
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~~i~gl~~p 53 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLKTISTYLKP 53 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9989999999997199999999662056
No 215
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=83.86 E-value=0.41 Score=21.83 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=20.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
..|+|.|.||+|||+|..++...-
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 299999999989999999996798
No 216
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=83.78 E-value=0.38 Score=22.07 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=24.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCCC
Q ss_conf 29999589774999999999991---993999956521
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMSSI 1020 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~L 1020 (1251)
=|-+.|++|+|||++++++.+.+ +.....+.+-.+
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99998999780999999999997156997699947778
No 217
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.59 E-value=0.88 Score=19.59 Aligned_cols=52 Identities=21% Similarity=0.359 Sum_probs=28.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHH
Q ss_conf 888411248399999999998740378255521788--8899329999589774999
Q 000858 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1251)
Q Consensus 945 ~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i--~kP~~gILL~GPpGTGKT~ 999 (1251)
..+|++++-.+...+.|.+. .+.+|.......+ .-..+.+++..|.|+|||.
T Consensus 16 ~~sF~~l~L~~~l~~~L~~~---g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 16 TPTFDTMGLREDLLRGIYAY---GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCSGGGGCCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCCHHHCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHH
T ss_conf 99977779899999999987---9999999999999999879986997574341454
No 218
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.53 E-value=0.43 Score=21.68 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|.+|+|||+|+..+...
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999994989999999729
No 219
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.52 E-value=0.89 Score=19.57 Aligned_cols=16 Identities=44% Similarity=0.520 Sum_probs=13.7
Q ss_pred CEEEEECCCCCHHHHH
Q ss_conf 3299995897749999
Q 000858 985 KGILLFGPPGTGKTML 1000 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~L 1000 (1251)
+.+++.+|+|+|||+.
T Consensus 39 ~dvi~~a~tGsGKTla 54 (206)
T d1s2ma1 39 RDILARAKNGTGKTAA 54 (206)
T ss_dssp CCEEEECCTTSCHHHH
T ss_pred CCEEEECCCCCHHHHH
T ss_conf 9889865876214444
No 220
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=83.49 E-value=0.89 Score=19.56 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=22.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH----HCCCEEEEEC
Q ss_conf 32999958977499999999999----1993999956
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE----AGANFINISM 1017 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e----lg~pfi~Id~ 1017 (1251)
++.|+.+|.|+|||.++-.++.. .+..++.+..
T Consensus 24 ~n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P 60 (200)
T d1wp9a1 24 TNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP 60 (200)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 9969991899728899999999999706981899737
No 221
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.36 E-value=0.9 Score=19.52 Aligned_cols=56 Identities=21% Similarity=0.241 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC--CCCCCEEEEECCCCCHHHHHH
Q ss_conf 98888411248399999999998740378255521788--889932999958977499999
Q 000858 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTMLA 1001 (1251)
Q Consensus 943 e~~vtfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i--~kP~~gILL~GPpGTGKT~LA 1001 (1251)
++..+|++++-.+.+.+.|.+. .+.++....+..+ ....+.+++..|+|+|||+..
T Consensus 7 ~~~~sF~~l~l~~~l~~~L~~~---g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 7 KVVYKFDDMELDENLLRGVFGY---GFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp CCCCCGGGGTCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHH
T ss_pred CCCCCHHHCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
T ss_conf 5126954489799999999987---999999999999999986998774456530100466
No 222
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.07 E-value=0.66 Score=20.46 Aligned_cols=70 Identities=11% Similarity=0.172 Sum_probs=45.3
Q ss_pred CCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCC
Q ss_conf 98699974703341159336899999871399988999622578863224899975020357603322013689985522
Q 000858 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRL 783 (1251)
Q Consensus 704 ~P~Ilfi~Dve~~l~~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~l~d~~~pd~~~~~ 783 (1251)
..-|++|+|++.+ . .+..+.+...++......++|..++..+. +
T Consensus 108 ~~~viiiDe~d~l-~--~~~~~~l~~~~~~~~~~~~~i~~~~~~~~---------------------~------------ 151 (237)
T d1sxjd2 108 PYKIIILDEADSM-T--ADAQSALRRTMETYSGVTRFCLICNYVTR---------------------I------------ 151 (237)
T ss_dssp SCEEEEETTGGGS-C--HHHHHHHHHHHHHTTTTEEEEEEESCGGG---------------------S------------
T ss_pred CCEEEEEECCCCC-C--HHHHHHHHHCCCCCCCCCCCCCCCCCCCC---------------------C------------
T ss_conf 7369999551336-7--77788876301222233332122466422---------------------2------------
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHH
Q ss_conf 3234562699989763179808853883467999999
Q 000858 784 HDRSKETPKALKQISRLFPNKVTIQLPQDEALLSDWK 820 (1251)
Q Consensus 784 ~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlRRfe 820 (1251)
+..+-.++ ..|.+.+|..+.+...+.
T Consensus 152 ----------~~~l~sr~-~~i~f~~~~~~~~~~~L~ 177 (237)
T d1sxjd2 152 ----------IDPLASQC-SKFRFKALDASNAIDRLR 177 (237)
T ss_dssp ----------CHHHHHHS-EEEECCCCCHHHHHHHHH
T ss_pred ----------CCCCCCHH-HHHCCCCCCCCCCCHHHH
T ss_conf ----------33111000-110233333321100101
No 223
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.64 E-value=0.49 Score=21.30 Aligned_cols=22 Identities=32% Similarity=0.440 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.+++.|++|+|||+|...+...
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999739
No 224
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.62 E-value=0.49 Score=21.29 Aligned_cols=22 Identities=14% Similarity=0.323 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|+..+.+.
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998995989999999829
No 225
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=82.52 E-value=0.47 Score=21.41 Aligned_cols=27 Identities=19% Similarity=0.348 Sum_probs=21.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 993299995897749999999999919
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
+..-+-|.||.|+|||+|+++|+.-..
T Consensus 27 ~GEi~~iiG~sGsGKSTLl~~i~Gl~~ 53 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTFLRCINFLEK 53 (258)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 997999998999829999999974766
No 226
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=82.51 E-value=0.34 Score=22.36 Aligned_cols=33 Identities=36% Similarity=0.545 Sum_probs=28.4
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 89312027898158899999999844187199984
Q 000858 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1251)
Q Consensus 492 ~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 526 (1251)
=+.|+|.|||| -...++|++||+.++.+++-.|
T Consensus 4 ~~~I~i~G~pG--sGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 4 LPNILLTGTPG--VGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCCEEEECSTT--SSHHHHHHHHHHHHCCEEEEHH
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHHHCCCEEECH
T ss_conf 89798989999--9989999999999799589516
No 227
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.25 E-value=0.52 Score=21.14 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.+++.|++|+|||+|+..+.+.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990989999999829
No 228
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.24 E-value=0.99 Score=19.24 Aligned_cols=15 Identities=40% Similarity=0.496 Sum_probs=13.3
Q ss_pred CEEEEECCCCCHHHH
Q ss_conf 329999589774999
Q 000858 985 KGILLFGPPGTGKTM 999 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~ 999 (1251)
+.+++..|+|+|||+
T Consensus 41 ~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 41 RDILARAKNGTGKSG 55 (206)
T ss_dssp CCEEEECCSSSTTHH
T ss_pred CCEEEECCCCCCCCC
T ss_conf 988744367400112
No 229
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.06 E-value=0.53 Score=21.07 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=20.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|++.|.+|+|||+|+..+.+.-
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999998598
No 230
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.92 E-value=0.54 Score=21.04 Aligned_cols=23 Identities=30% Similarity=0.541 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.+++.|++|+|||+|...+...-
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989978999999997398
No 231
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=81.90 E-value=0.44 Score=21.62 Aligned_cols=33 Identities=33% Similarity=0.279 Sum_probs=29.3
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 31202789815889999999984418719998466
Q 000858 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1251)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~ 528 (1251)
=|+|.||+| -...++|++||+.++.+...+|.-
T Consensus 6 iI~l~G~~G--sGKSTia~~La~~lg~~~~~~~~d 38 (176)
T d1zp6a1 6 ILLLSGHPG--SGKSTIAEALANLPGVPKVHFHSD 38 (176)
T ss_dssp EEEEEECTT--SCHHHHHHHHHTCSSSCEEEECTT
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHCCCEEEECHH
T ss_conf 999988999--988999999999959997990689
No 232
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.76 E-value=0.51 Score=21.19 Aligned_cols=22 Identities=36% Similarity=0.603 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.++|.|.+|+|||+|...+.+.
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999729
No 233
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.97 E-value=0.6 Score=20.72 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|.+|+|||+|+..+...
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999993989999999829
No 234
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=80.85 E-value=0.62 Score=20.64 Aligned_cols=22 Identities=27% Similarity=0.576 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|.+|+|||+|+..+.+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999719
No 235
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=80.66 E-value=1.1 Score=18.88 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=22.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 3299995897749999999999919
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
++|-|.|..|+|||+|+.++....+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 2999995898998999999999648
No 236
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=80.53 E-value=1.1 Score=18.85 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=27.7
Q ss_pred CEEEEECC-CCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 32999958-9774999999999991---993999956
Q 000858 985 KGILLFGP-PGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 985 ~gILL~GP-pGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
+.+++.|- +|+|||+++-.+|..+ |..+..++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 5199998999942999999999999977993999886
No 237
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=80.42 E-value=1.1 Score=18.83 Aligned_cols=33 Identities=33% Similarity=0.445 Sum_probs=26.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 29999589774999999999991---9939999565
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s 1018 (1251)
=+++.|.-|+|||+++..+|..+ |..+.-+++-
T Consensus 22 iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 22 LIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 999979998878999999999999789938999379
No 238
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=80.20 E-value=0.67 Score=20.38 Aligned_cols=24 Identities=29% Similarity=0.397 Sum_probs=19.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 993299995897749999999999
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
.--.|++.|++|+|||+|...+..
T Consensus 16 k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 16 KELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp SCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CEEEEEEECCCCCCHHHHHHHHHC
T ss_conf 668999999999988999988733
No 239
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=79.95 E-value=1.2 Score=18.73 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=21.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 3299995897749999999999919939999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~I 1015 (1251)
+.+++.-|.|+|||..+...........+.+
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~~~~~~~~~v 71 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPALLLNGLTVVV 71 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHHSSSEEEEE
T ss_pred CCEEEECCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf 9889986788997523120255426724786
No 240
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.86 E-value=0.7 Score=20.25 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999992999999999719
No 241
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.56 E-value=1.2 Score=18.65 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|.+|+|||+|+..+...
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999992989999999739
No 242
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.50 E-value=0.73 Score=20.16 Aligned_cols=22 Identities=27% Similarity=0.590 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|...+...
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999996989999999709
No 243
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.39 E-value=0.74 Score=20.09 Aligned_cols=23 Identities=30% Similarity=0.510 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
-.|++.|.+|+|||+|...+...
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 28999998990889999999719
No 244
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=79.29 E-value=1.2 Score=18.59 Aligned_cols=23 Identities=26% Similarity=0.206 Sum_probs=17.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
..+++..|.|+|||+.+-....+
T Consensus 43 ~d~iv~a~TGsGKT~~~~l~~~~ 65 (208)
T d1hv8a1 43 YNIVAQARTGSGKTASFAIPLIE 65 (208)
T ss_dssp SEEEEECCSSSSHHHHHHHHHHH
T ss_pred CCEEEECHHCCCCCCEEECCCCC
T ss_conf 97464410034444002033321
No 245
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.26 E-value=0.7 Score=20.29 Aligned_cols=22 Identities=32% Similarity=0.543 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|.+|+|||+|+..+...
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990999999999709
No 246
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.20 E-value=0.7 Score=20.26 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.+++.|.+|+|||+|...+...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999996789999999868
No 247
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=79.17 E-value=0.52 Score=21.15 Aligned_cols=33 Identities=33% Similarity=0.496 Sum_probs=29.2
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 89312027898158899999999844187199984
Q 000858 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1251)
Q Consensus 492 ~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 526 (1251)
.|+|.|-||+| -...+++|+||+.++.+++-+|
T Consensus 1 ~p~IvliG~~G--~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 1 APKAVLVGLPG--SGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp CCSEEEECSTT--SSHHHHHHHHHHHHTCCEEEHH
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHHCCCEEEEC
T ss_conf 99489988999--9889999999998499869602
No 248
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.04 E-value=0.61 Score=20.69 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=19.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|.+|+|||+|...+...
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998997989999999709
No 249
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.03 E-value=0.71 Score=20.21 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
..|+|.|++|+|||+|...+...
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 38999998992989999999719
No 250
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.89 E-value=0.73 Score=20.16 Aligned_cols=24 Identities=25% Similarity=0.385 Sum_probs=20.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.-|++.|.+|+|||+|...+...-
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 799999989938899999997199
No 251
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.73 E-value=0.74 Score=20.11 Aligned_cols=22 Identities=23% Similarity=0.419 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|.+|+|||+|+..+.+.
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998990989999999849
No 252
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.55 E-value=0.25 Score=23.34 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=23.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 32999958977499999999999199
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
+-|.|.|+.|+|||++++.++..+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 88999878887799999999999735
No 253
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.41 E-value=0.77 Score=20.01 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|++.|++|+|||+|+..+...
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990989999999619
No 254
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=78.40 E-value=1.3 Score=18.41 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=38.9
Q ss_pred EEEECCCCCHHHH-HHHHHH--HHHCCCEEEEECCCCCCCC-------CCCH-----HHHHHHHHHHHH----HCCCCEE
Q ss_conf 9999589774999-999999--9919939999565211001-------4740-----899999999988----3099159
Q 000858 987 ILLFGPPGTGKTM-LAKAVA--TEAGANFINISMSSITSKW-------FGEG-----EKYVKAVFSLAS----KIAPSVV 1047 (1251)
Q Consensus 987 ILL~GPpGTGKT~-LAkAIA--~elg~pfi~Id~s~L~s~~-------~Ges-----Ek~Ir~iF~~A~----k~~PsII 1047 (1251)
-+++||-.+|||+ |.+.+- ...+..++-+.... ...+ .|.. -.....++.... .....+|
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~-D~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~dvI 83 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI-DTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVI 83 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC-CGGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC-CCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEE
T ss_conf 999915067899999999999987799589997731-3424644772368526558952640357888753016676799
Q ss_pred EECCCCCC
Q ss_conf 98442000
Q 000858 1048 FVDEVDSM 1055 (1251)
Q Consensus 1048 fIDEID~L 1055 (1251)
+|||++-+
T Consensus 84 ~IDE~QFf 91 (139)
T d2b8ta1 84 GIDEVQFF 91 (139)
T ss_dssp EECSGGGS
T ss_pred EECHHHHC
T ss_conf 96103435
No 255
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=78.29 E-value=0.96 Score=19.36 Aligned_cols=72 Identities=19% Similarity=0.303 Sum_probs=45.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCC--CEEECCCCCCHHHHHHHH
Q ss_conf 7998750456887543333345544306789999874221024554222247899-8889--312027898158899999
Q 000858 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLP-TMCP--RILLSGPAGSEIYQETLA 511 (1251)
Q Consensus 435 ~~~~l~~~i~~~~~~~vsfd~FPYylse~tk~~L~~~~~~hL~~~~~~k~~~~l~-~~~~--rILLsgp~GsE~Yqe~La 511 (1251)
.++.|.+.|+ |+ ++.+..+..+..-+ .. .|. +..| -||+.||+| ..+..||
T Consensus 17 l~~~L~~~v~-GQ--------------~~ai~~v~~~i~~~----~~-----~l~~~~kp~~~~lf~Gp~G--~GKt~la 70 (315)
T d1qvra3 17 LEEELHKRVV-GQ--------------DEAIRAVADAIRRA----RA-----GLKDPNRPIGSFLFLGPTG--VGKTELA 70 (315)
T ss_dssp HHHHHHHHSC-SC--------------HHHHHHHHHHHHHH----GG-----GCSCSSSCSEEEEEBSCSS--SSHHHHH
T ss_pred HHHHHCCEEE-CH--------------HHHHHHHHHHHHHH----HC-----CCCCCCCCCEEEEEECCCC--CHHHHHH
T ss_conf 9999568270-87--------------99999999999998----65-----7899888766999978886--2489999
Q ss_pred HHHHHHC---CCEEEEEECCCCCC
Q ss_conf 9998441---87199984667899
Q 000858 512 KALAKHF---SARLLIVDSLLLPG 532 (1251)
Q Consensus 512 KALA~~f---~a~LL~lDs~~~~g 532 (1251)
|+||+.+ +.++.-+|.+.+..
T Consensus 71 k~la~~l~~~~~~~~~~~~~~~~~ 94 (315)
T d1qvra3 71 KTLAATLFDTEEAMIRIDMTEYME 94 (315)
T ss_dssp HHHHHHHHSSGGGEEEECTTTCCS
T ss_pred HHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 999998358875348873155454
No 256
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.23 E-value=0.86 Score=19.68 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=46.8
Q ss_pred CCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCC
Q ss_conf 98699974703341159336899999871399988999622578863224899975020357603322013689985522
Q 000858 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRL 783 (1251)
Q Consensus 704 ~P~Ilfi~Dve~~l~~~~~~~~~l~~~L~~L~g~VivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~l~d~~~pd~~~~~ 783 (1251)
..-|++|+|++. +... ..+.+...++..+...++|..++..+. +
T Consensus 101 ~~kviiiDe~d~-~~~~--~~~~ll~~~e~~~~~~~~i~~~~~~~~------------------------------i--- 144 (224)
T d1sxjb2 101 KHKIVILDEADS-MTAG--AQQALRRTMELYSNSTRFAFACNQSNK------------------------------I--- 144 (224)
T ss_dssp CCEEEEEESGGG-SCHH--HHHTTHHHHHHTTTTEEEEEEESCGGG------------------------------S---
T ss_pred CEEEEEEECCCC-CCHH--HHHHHHHHCCCCCCCEEEEECCCCHHH------------------------------H---
T ss_conf 359999824432-3215--778775201123333366531474302------------------------------1---
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
Q ss_conf 32345626999897631798088538834679999999
Q 000858 784 HDRSKETPKALKQISRLFPNKVTIQLPQDEALLSDWKQ 821 (1251)
Q Consensus 784 ~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlRRfer 821 (1251)
.+.+-.++ ..|.+.+|..+.+..++.+
T Consensus 145 ----------~~~l~sr~-~~i~~~~~~~~~i~~~l~~ 171 (224)
T d1sxjb2 145 ----------IEPLQSQC-AILRYSKLSDEDVLKRLLQ 171 (224)
T ss_dssp ----------CHHHHTTS-EEEECCCCCHHHHHHHHHH
T ss_pred ----------HHHHHHHH-HHHHHCCCCHHHHHHHHHH
T ss_conf ----------06788777-7765313322456788877
No 257
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.13 E-value=0.86 Score=19.68 Aligned_cols=23 Identities=30% Similarity=0.361 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.+++.|.+|+|||+|...+...-
T Consensus 7 KivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999979999999997498
No 258
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=78.09 E-value=0.84 Score=19.74 Aligned_cols=62 Identities=19% Similarity=0.134 Sum_probs=31.5
Q ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCC
Q ss_conf 99988309915998442000147899852799999998677640688556886489999438988873999820354424
Q 000858 1036 FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLM 1115 (1251)
Q Consensus 1036 F~~A~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld~aLlrRF~~~I~ 1115 (1251)
+..+....|.+|+|||++.-+ .......+++ ++.. +... . .-||.+|..++.+ ..+++++.
T Consensus 218 ~~~~l~~~~~llllDEp~~~L-------d~~~~~~l~~-~l~~---~~~~--~-~qviv~TH~~~~~-----~~~D~ii~ 278 (292)
T g1f2t.1 218 MSLYLAGEISLLILDEPTPYL-------DEERRRKLIT-IMER---YLKK--I-PQVILVSHDEELK-----DAADHVIR 278 (292)
T ss_dssp HHHHHHSSCSEEEEESCSCTT-------CHHHHHHHHH-HHHH---TGGG--S-SEEEEEESCGGGG-----GGCSEEEE
T ss_pred HHHHHCCCCCEEEEECCCCCC-------CHHHHHHHHH-HHHH---HHHC--C-CEEEEEEECHHHH-----HHCCEEEE
T ss_conf 866544799889971875548-------9999999999-9999---9837--9-9999996208999-----85999999
Q ss_pred C
Q ss_conf 7
Q 000858 1116 V 1116 (1251)
Q Consensus 1116 I 1116 (1251)
+
T Consensus 279 l 279 (292)
T g1f2t.1 279 I 279 (292)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 259
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.02 E-value=0.87 Score=19.65 Aligned_cols=23 Identities=22% Similarity=0.453 Sum_probs=19.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|++.|.+|+|||+|...+...-
T Consensus 5 KivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999989989999999997098
No 260
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.99 E-value=0.87 Score=19.64 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=19.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.+++.|.+|+|||+|...+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999729
No 261
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=77.83 E-value=0.57 Score=20.89 Aligned_cols=32 Identities=28% Similarity=0.494 Sum_probs=27.5
Q ss_pred CCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9312027898158899999999844187199984
Q 000858 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1251)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 526 (1251)
+-|.|.||+| -...++||+||+.++.+..-.|
T Consensus 3 k~I~l~G~~G--sGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMG--AGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHTTCEEEEHH
T ss_pred CEEEEECCCC--CCHHHHHHHHHHHHCCCEEEEC
T ss_conf 7499989999--9999999999999699969500
No 262
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.81 E-value=0.88 Score=19.61 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=19.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|.+|+|||+|...+.+.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 8999998994999999999739
No 263
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=77.81 E-value=0.72 Score=20.18 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|+|.|+||+|||+|..++..+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999998899999999689
No 264
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.61 E-value=0.84 Score=19.75 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=19.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
-++|.|.+|+|||+|+..+...
T Consensus 4 KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999995989999999729
No 265
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.49 E-value=0.91 Score=19.51 Aligned_cols=23 Identities=22% Similarity=0.380 Sum_probs=20.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
-.+++.|.+|+|||+|...+.+.
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999998995989999999709
No 266
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=77.36 E-value=0.84 Score=19.74 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=19.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 3299995897749999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
+.|.|.|+||+|||+|..++.+
T Consensus 24 ~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHCC
T ss_conf 8999989999879999998529
No 267
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.09 E-value=0.88 Score=19.62 Aligned_cols=21 Identities=38% Similarity=0.634 Sum_probs=18.7
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 299995897749999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
-|+|.|.+|+|||+|+..+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999899299999999972
No 268
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=76.60 E-value=1.5 Score=18.08 Aligned_cols=34 Identities=15% Similarity=0.453 Sum_probs=27.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECC
Q ss_conf 329999589774999999999991---9939999565
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s 1018 (1251)
+.|-++|.=|+|||++|-.+|..+ |..+.-+|+-
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 7999989985779999999999999689958999637
No 269
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=76.45 E-value=0.59 Score=20.76 Aligned_cols=26 Identities=35% Similarity=0.418 Sum_probs=15.9
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 3120278981588999999998441871
Q 000858 494 RILLSGPAGSEIYQETLAKALAKHFSAR 521 (1251)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~ 521 (1251)
||-+-|+-| ..+.+++++|+++++.+
T Consensus 8 rI~iEG~iG--sGKSTl~~~L~~~l~~~ 33 (333)
T d1p6xa_ 8 RIYLDGVYG--IGKSTTGRVMASAASGG 33 (333)
T ss_dssp EEEEECSTT--SSHHHHHHHHHSGGGCS
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHCCC
T ss_conf 999988866--78999999999986569
No 270
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.34 E-value=0.94 Score=19.41 Aligned_cols=23 Identities=30% Similarity=0.394 Sum_probs=19.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
.|+|.|.+|+|||+|...+.+..
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999989999999996499
No 271
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=76.01 E-value=1.1 Score=18.99 Aligned_cols=35 Identities=26% Similarity=0.177 Sum_probs=18.7
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 31202789815889999999984418719998466
Q 000858 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1251)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs~ 528 (1251)
.|+.---..+..-|..+.++|+....--+++-|..
T Consensus 216 ~i~vDE~QD~~~~q~~~~~~l~~~~~~l~~~gd~~ 250 (623)
T g1qhh.1 216 YIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDAD 250 (623)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHTTTCCEEEEECGG
T ss_pred EEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 76402345415789999999734557479850465
No 272
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.88 E-value=0.99 Score=19.24 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 29999589774999999999991
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
-|++.|.+|+|||+|...+...-
T Consensus 5 KvvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999969999999997199
No 273
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=74.89 E-value=1.6 Score=17.79 Aligned_cols=22 Identities=27% Similarity=0.585 Sum_probs=19.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2999958977499999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.|.+.|++|+|||+|..++...
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999899999999677
No 274
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.30 E-value=1.7 Score=17.69 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=13.0
Q ss_pred CEEEEECCCCCHHHHH
Q ss_conf 3299995897749999
Q 000858 985 KGILLFGPPGTGKTML 1000 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~L 1000 (1251)
+.+++..|+|+|||+.
T Consensus 39 ~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 39 MDVLCQAKSGMGKTAV 54 (207)
T ss_dssp CCEEEECCTTSCHHHH
T ss_pred CCEEEEECCCCCCCCC
T ss_conf 9857772233321200
No 275
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=74.25 E-value=1.3 Score=18.44 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=8.9
Q ss_pred CEEEECCCCCC
Q ss_conf 15998442000
Q 000858 1045 SVVFVDEVDSM 1055 (1251)
Q Consensus 1045 sIIfIDEID~L 1055 (1251)
..|+|||+.-.
T Consensus 379 ~~ilVDEfQDt 389 (485)
T d1w36b1 379 PVAMIDEFQDT 389 (485)
T ss_dssp SEEEECSGGGC
T ss_pred CEEEECCCCCC
T ss_conf 86871120127
No 276
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.21 E-value=0.6 Score=20.70 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=18.7
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 299995897749999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
.|++.|.+|+|||+|..++..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999499999999970
No 277
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=74.11 E-value=0.84 Score=19.73 Aligned_cols=33 Identities=36% Similarity=0.372 Sum_probs=28.9
Q ss_pred CCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 93120278981588999999998441871999846
Q 000858 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1251)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lDs 527 (1251)
+.|.|.||+| -...+++|+||+.++.+++=+|-
T Consensus 1 k~I~liG~~G--sGKsTi~k~La~~l~~~~~d~d~ 33 (161)
T d1viaa_ 1 KNIVFIGFMG--SGKSTLARALAKDLDLVFLDSDF 33 (161)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHHTCEEEEHHH
T ss_pred CCEEEECCCC--CCHHHHHHHHHHHHCCCEEECCC
T ss_conf 9399989999--98899999999983998783673
No 278
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.47 E-value=0.94 Score=19.42 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=24.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
+..+|.|++|+||++|..++........-.++
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs 127 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEVS 127 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC-----
T ss_pred CEEEEECCCCCCHHHHHHHHCCHHHHHCCCCC
T ss_conf 80899788987788887730535550106842
No 279
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=72.76 E-value=1 Score=19.21 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=14.5
Q ss_pred EEECCCCCCHHHHHHHHHHHHH
Q ss_conf 1202789815889999999984
Q 000858 495 ILLSGPAGSEIYQETLAKALAK 516 (1251)
Q Consensus 495 ILLsgp~GsE~Yqe~LaKALA~ 516 (1251)
-+|.||-| -...++..|++-
T Consensus 29 nvi~G~NG--sGKS~il~AI~~ 48 (329)
T g1xew.1 29 TAIVGANG--SGKSNIGDAILF 48 (329)
T ss_dssp EEEEECTT--SSSHHHHHHHHH
T ss_pred EEEECCCC--CCHHHHHHHHHH
T ss_conf 99999999--889999999999
No 280
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=70.31 E-value=1.4 Score=18.15 Aligned_cols=20 Identities=25% Similarity=0.288 Sum_probs=14.9
Q ss_pred CEEECCCCCCHHHHHHHHHHHH
Q ss_conf 3120278981588999999998
Q 000858 494 RILLSGPAGSEIYQETLAKALA 515 (1251)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA 515 (1251)
=.++.||-| ....+|.+||.
T Consensus 25 ~~vi~G~Ng--sGKTtileAI~ 44 (369)
T g1ii8.1 25 INLIIGQNG--SGKSSLLDAIL 44 (369)
T ss_dssp EEEEECCTT--SSHHHHHHHHH
T ss_pred EEEEECCCC--CCHHHHHHHHH
T ss_conf 199997899--99999999999
No 281
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=69.94 E-value=1 Score=19.09 Aligned_cols=25 Identities=32% Similarity=0.305 Sum_probs=21.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 2999958977499999999999199
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAGA 1010 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg~ 1010 (1251)
.|.|.|+-|+|||++++.++..+..
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999888778899999999998734
No 282
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.42 E-value=2.2 Score=16.97 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=25.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH-------CCCEEEEECCC
Q ss_conf 29999589774999999999991-------99399995652
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA-------GANFINISMSS 1019 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el-------g~pfi~Id~s~ 1019 (1251)
.|++.|..|+|||+|...+...- |+.+..+....
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~~~~~pTiG~~~~~~~~~~ 44 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIHGSGVPTTGIIEYPFDLQS 44 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTSSCCCCCSCEEEEEECSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCC
T ss_conf 99999999998899999996799999816627999984020
No 283
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=69.28 E-value=2.2 Score=16.95 Aligned_cols=24 Identities=38% Similarity=0.437 Sum_probs=20.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+-.+|.|.-|+|||+|.+.+..+.
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHSC
T ss_pred CEEEEEECCCCCHHHHHHHHHHCC
T ss_conf 889986488899999999998567
No 284
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=68.60 E-value=1.7 Score=17.63 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=19.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
.-|.|.|.+|+|||+|..++.+.
T Consensus 6 ~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 6 GFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEECSSSSSHHHHHHHHHTC
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 19999979999899999999589
No 285
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=68.36 E-value=1.3 Score=18.50 Aligned_cols=24 Identities=33% Similarity=0.499 Sum_probs=19.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 993299995897749999999999
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
+..-+-|.||.|+|||+|.+.++.
T Consensus 24 ~Gei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp TTCEEECBCCTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 898999998999809999999948
No 286
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.14 E-value=2.3 Score=16.79 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=22.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH----CCCEEEEEC
Q ss_conf 29999589774999999999991----993999956
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA----GANFINISM 1017 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el----g~pfi~Id~ 1017 (1251)
.|+|.|..|+|||+|.+.+...- +.+...++.
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~~~t~~~~~~~~~~ 39 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTF 39 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCSEEEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEE
T ss_conf 999999999888999998840897972479999974
No 287
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=67.49 E-value=2.4 Score=16.71 Aligned_cols=36 Identities=25% Similarity=0.197 Sum_probs=25.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH---CCCEEEEECCC
Q ss_conf 9329999589774999999999991---99399995652
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSS 1019 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~s~ 1019 (1251)
+...||+|..|+|||.++-..+... |..++.+-...
T Consensus 76 ~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~ 114 (233)
T d2eyqa3 76 AMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTT 114 (233)
T ss_dssp CCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCHH
T ss_conf 667089838887728999999999997689569974688
No 288
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.46 E-value=2.2 Score=16.95 Aligned_cols=26 Identities=23% Similarity=0.325 Sum_probs=21.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99329999589774999999999991
Q 000858 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 983 P~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
|--.|++.|.+|+|||+|...+...-
T Consensus 4 p~~ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 4 PELRLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp CEEEEEEECCTTTTHHHHHHHHHHSC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 83799999989978999999997197
No 289
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=67.38 E-value=2.4 Score=16.69 Aligned_cols=71 Identities=24% Similarity=0.229 Sum_probs=41.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH-----CCCEEEEECCCCCCCCCCCHHH-----------------------------
Q ss_conf 329999589774999999999991-----9939999565211001474089-----------------------------
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSSITSKWFGEGEK----------------------------- 1030 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el-----g~pfi~Id~s~L~s~~~GesEk----------------------------- 1030 (1251)
.|.||.=+.|+|||..+-+++..+ ..++..+....+...|..+..+
T Consensus 32 ~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~vvi~~~ 111 (230)
T d1z63a1 32 FGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLKNWEEELSKFAPHLRFAVFHEDRSKIKLEDYDIILTTY 111 (230)
T ss_dssp CCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHHHHHHHHHHHCTTSCEEECSSSTTSCCGGGSSEEEEEH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCEEEEEH
T ss_conf 98799858998869999873554421235564411053554267777777640254410101421000025768898549
Q ss_pred -HHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf -99999999883099159984420001
Q 000858 1031 -YVKAVFSLASKIAPSVVFVDEVDSML 1056 (1251)
Q Consensus 1031 -~Ir~iF~~A~k~~PsIIfIDEID~L~ 1056 (1251)
.+.. +.........+|++||.+.+-
T Consensus 112 ~~~~~-~~~l~~~~~~~vI~DEah~~k 137 (230)
T d1z63a1 112 AVLLR-DTRLKEVEWKYIVIDEAQNIK 137 (230)
T ss_dssp HHHTT-CHHHHTCCEEEEEEETGGGGS
T ss_pred HHHHH-HHHHHCCCCEEEEEEHHHCCC
T ss_conf 99986-888741651399997100344
No 290
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.10 E-value=2.4 Score=16.71 Aligned_cols=22 Identities=18% Similarity=0.317 Sum_probs=16.6
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 120278981588999999998441
Q 000858 495 ILLSGPAGSEIYQETLAKALAKHF 518 (1251)
Q Consensus 495 ILLsgp~GsE~Yqe~LaKALA~~f 518 (1251)
-++.||-| -..-.+.-|+.--|
T Consensus 28 ~~i~G~NG--sGKS~ileAi~~~l 49 (427)
T d1w1wa_ 28 TSIIGPNG--SGKSNMMDAISFVL 49 (427)
T ss_dssp EEEECSTT--SSHHHHHHHHHHHT
T ss_pred EEEECCCC--CCHHHHHHHHHHHH
T ss_conf 99999999--98899999999985
No 291
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=67.07 E-value=2.4 Score=16.65 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=17.2
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 88931202789815889999999984418
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHFS 519 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f~ 519 (1251)
-++.|++||-+| -.+..=+|-+-+|+-
T Consensus 120 ~nQ~IiisGESG--aGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 120 ENQSCLITGESG--AGKTENTKKVIMYLA 146 (789)
T ss_dssp SEEEEEEECSTT--SSHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCC--CCHHHHHHHHHHHHH
T ss_conf 994799970899--987999999999999
No 292
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.70 E-value=2.4 Score=16.68 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=19.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 93299995897749999999999
Q 000858 984 CKGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
+-.|.+.|.||+||++|..++..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 71799989999978999999958
No 293
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=66.68 E-value=1.5 Score=18.02 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=18.8
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 299995897749999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
.|.|.|.|++|||+|..++..
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899989999989999999968
No 294
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=66.63 E-value=2.2 Score=16.98 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
-.|.|.|.+|+|||+|..++...
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 88999999999999999999778
No 295
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=66.04 E-value=0.68 Score=20.34 Aligned_cols=32 Identities=34% Similarity=0.488 Sum_probs=23.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 32999958977499999999999199399995
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id 1016 (1251)
+..+|.|++|+||++|..++..+.....-.++
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC----------
T ss_pred CEEEEECCCCCCHHHHHHHHCCHHHHHHCCCC
T ss_conf 64999877873487898751517676403555
No 296
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=65.85 E-value=2.5 Score=16.50 Aligned_cols=26 Identities=15% Similarity=0.299 Sum_probs=17.4
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8893120278981588999999998441
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHF 518 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f 518 (1251)
-++.|++||-.| -.+..=+|-+-+|+
T Consensus 85 ~~QsIiisGeSG--sGKTe~~k~il~yL 110 (684)
T d1lkxa_ 85 ENQCVIISGESG--AGKTEASKKIMQFL 110 (684)
T ss_dssp CCEEEEEECSTT--SSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCC--CCHHHHHHHHHHHH
T ss_conf 981899973898--99899999999999
No 297
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=65.54 E-value=1.3 Score=18.41 Aligned_cols=24 Identities=25% Similarity=0.437 Sum_probs=17.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 299995897749999999999919
Q 000858 986 GILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
.|.|.|+-|+|||++++.++..++
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC---
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 999989867789999999999817
No 298
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=64.80 E-value=1.7 Score=17.74 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=18.5
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 299995897749999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
.|-|.|+|++|||+|..++..
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 699989999879999999968
No 299
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=64.46 E-value=0.96 Score=19.36 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=23.6
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 31202789815889999999984418719
Q 000858 494 RILLSGPAGSEIYQETLAKALAKHFSARL 522 (1251)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~L 522 (1251)
-|+|.|++| -...++||+||+.++++.
T Consensus 8 ~I~l~G~~G--sGKTTia~~La~~L~~~~ 34 (183)
T d1m8pa3 8 TIFLTGYMN--SGKDAIARALQVTLNQQG 34 (183)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHHHCC
T ss_conf 999889999--999999999999986507
No 300
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=63.82 E-value=1.4 Score=18.16 Aligned_cols=15 Identities=53% Similarity=0.902 Sum_probs=6.8
Q ss_pred EEEECCCCCHHHHHH
Q ss_conf 999958977499999
Q 000858 987 ILLFGPPGTGKTMLA 1001 (1251)
Q Consensus 987 ILL~GPpGTGKT~LA 1001 (1251)
.|++|.+|||||+|.
T Consensus 17 alffGLSGTGKTTLs 31 (318)
T d1j3ba1 17 AVFFGLSGTGKTTLS 31 (318)
T ss_dssp EEEEECTTSCHHHHT
T ss_pred EEEECCCCCCCCCCC
T ss_conf 999736879814221
No 301
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.60 E-value=0.81 Score=19.84 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=26.5
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 89312027898158899999999844187199984
Q 000858 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1251)
Q Consensus 492 ~~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL~lD 526 (1251)
+.-|+|.|++| -...+|||+||++++.+..-.|
T Consensus 19 g~vI~L~G~pG--SGKTTiAk~La~~l~~~~~~~~ 51 (195)
T d1x6va3 19 GCTVWLTGLSG--AGKTTVSMALEEYLVCHGIPCY 51 (195)
T ss_dssp CEEEEEESSCH--HHHHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCC--CCHHHHHHHHHHHHHHCCCCCC
T ss_conf 96999889999--9999999999999974479731
No 302
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=63.55 E-value=1.8 Score=17.57 Aligned_cols=18 Identities=22% Similarity=0.141 Sum_probs=7.7
Q ss_pred HHHHCCCEEEECCCCHHH
Q ss_conf 763179808853883467
Q 000858 797 ISRLFPNKVTIQLPQDEA 814 (1251)
Q Consensus 797 l~~lf~~~i~i~~P~DeA 814 (1251)
++.-|+++....+|...|
T Consensus 178 fs~cfg~PFl~~~p~~ya 195 (313)
T d2olra1 178 FSACFGAAFLSLHPTQYA 195 (313)
T ss_dssp ECGGGCGGGCSSCHHHHH
T ss_pred EEECCCCCCCCCCHHHHH
T ss_conf 643256545566678899
No 303
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=63.55 E-value=2.8 Score=16.21 Aligned_cols=26 Identities=15% Similarity=0.294 Sum_probs=17.1
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8893120278981588999999998441
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHF 518 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f 518 (1251)
-++.|+.||-+|+ .+..-+|-+-+|+
T Consensus 124 ~nQsIiisGeSGa--GKTe~~k~il~yL 149 (712)
T d1d0xa2 124 QNQSLLITGESGA--GKTENTKKVIQYL 149 (712)
T ss_dssp CCEEEEEECSTTS--SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC--CHHHHHHHHHHHH
T ss_conf 9916999679988--8899999999999
No 304
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=63.09 E-value=2.9 Score=16.16 Aligned_cols=32 Identities=16% Similarity=0.386 Sum_probs=24.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 29999589774999999999991---993999956
Q 000858 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
-|.++|.=|+|||+++-.+|..+ |..+.-||+
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~ 38 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGC 38 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 89998999877999999999999978997899951
No 305
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=62.76 E-value=2.9 Score=16.12 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=16.4
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8893120278981588999999998441
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHF 518 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f 518 (1251)
-++.|++||-+| -.+..=+|-+-+|+
T Consensus 122 ~~QsIiisGeSG--aGKTe~~K~il~yL 147 (794)
T d2mysa2 122 ENQSILITGESG--AGKTVNTKRVIQYF 147 (794)
T ss_dssp CCEEEEEEECTT--SCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC--CCHHHHHHHHHHHH
T ss_conf 980799971798--87899999999999
No 306
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=61.15 E-value=3.1 Score=15.93 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=16.3
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8893120278981588999999998441
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHF 518 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f 518 (1251)
-++.|++||-.|+ .+..=+|-+-+|+
T Consensus 90 ~~Q~IiisGeSGa--GKTe~~k~il~yL 115 (710)
T d1br2a2 90 EDQSILCTGESGA--GKTENTKKVIQYL 115 (710)
T ss_dssp CCEEEEEECSTTS--SHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCC--CHHHHHHHHHHHH
T ss_conf 9917999718988--8899999999999
No 307
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=60.53 E-value=1.4 Score=18.31 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=19.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHH
Q ss_conf 3299995897749999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
..|.|.|.|++|||+|..++..
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTCC
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 7899988999989999999858
No 308
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=59.04 E-value=2.3 Score=16.74 Aligned_cols=14 Identities=29% Similarity=0.415 Sum_probs=7.0
Q ss_pred EECCCCCCHHHHHHHH
Q ss_conf 2027898158899999
Q 000858 496 LLSGPAGSEIYQETLA 511 (1251)
Q Consensus 496 LLsgp~GsE~Yqe~La 511 (1251)
|..|.+| ....+|.
T Consensus 18 lfFGLSG--TGKTTLs 31 (323)
T d1ii2a1 18 VFFGLSG--TGKTTLS 31 (323)
T ss_dssp EEECCTT--SSHHHHH
T ss_pred EEECCCC--CCCCCCE
T ss_conf 9973677--8812051
No 309
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.99 E-value=3.4 Score=15.69 Aligned_cols=24 Identities=38% Similarity=0.535 Sum_probs=21.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 329999589774999999999991
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
..++|+|++|+|||+|+..++...
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 877766799989899999999988
No 310
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=57.94 E-value=1.7 Score=17.76 Aligned_cols=22 Identities=9% Similarity=0.238 Sum_probs=12.0
Q ss_pred CCCEEEEEECCCC-CCCCHHHHH
Q ss_conf 8648999943898-887399982
Q 000858 1087 KERVLVLAATNRP-FDLDEAVVR 1108 (1251)
Q Consensus 1087 ~~~VlVIaTTN~p-e~Ld~aLlr 1108 (1251)
+.++.+|++.++. ...++.+..
T Consensus 297 ~s~t~~I~~isp~~~~~~eTl~T 319 (354)
T d1goja_ 297 NSRTTLIINCSPSSYNDAETLST 319 (354)
T ss_dssp SCEEEEEEEECCBGGGHHHHHHH
T ss_pred CCEEEEEEEECCCCCCHHHHHHH
T ss_conf 97099999979973227999999
No 311
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.31 E-value=1.3 Score=18.42 Aligned_cols=21 Identities=10% Similarity=0.180 Sum_probs=9.5
Q ss_pred CCEEEEEECCCC-CCCCHHHHH
Q ss_conf 648999943898-887399982
Q 000858 1088 ERVLVLAATNRP-FDLDEAVVR 1108 (1251)
Q Consensus 1088 ~~VlVIaTTN~p-e~Ld~aLlr 1108 (1251)
.++++|++.++. ..+++.+..
T Consensus 292 ~~t~~I~~isp~~~~~~eTl~t 313 (323)
T d1bg2a_ 292 CRTTIVICCSPSSYNESETKST 313 (323)
T ss_dssp CEEEEEEEECCBGGGHHHHHHH
T ss_pred CCEEEEEEECCCCHHHHHHHHH
T ss_conf 6299999979860108999999
No 312
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=56.36 E-value=1.1 Score=18.86 Aligned_cols=23 Identities=30% Similarity=0.267 Sum_probs=20.4
Q ss_pred EEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 99995897749999999999919
Q 000858 987 ILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
.+|+||-|+|||++..||.--+.
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
T ss_conf 89988999987999999999966
No 313
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=55.33 E-value=3.8 Score=15.29 Aligned_cols=26 Identities=27% Similarity=0.336 Sum_probs=15.9
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8893120278981588999999998441
Q 000858 491 MCPRILLSGPAGSEIYQETLAKALAKHF 518 (1251)
Q Consensus 491 ~~~rILLsgp~GsE~Yqe~LaKALA~~f 518 (1251)
-++.|++||-.|+ .+..=+|-+-+|+
T Consensus 93 ~~Q~IiisGeSGs--GKTe~~k~il~~l 118 (730)
T d1w7ja2 93 RNQSIIVSGESGA--GKTVSAKYAMRYF 118 (730)
T ss_dssp CCEEEEEECSTTS--SHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCC--CHHHHHHHHHHHH
T ss_conf 9807999717999--8799999999999
No 314
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=55.09 E-value=2.3 Score=16.81 Aligned_cols=49 Identities=18% Similarity=0.234 Sum_probs=27.0
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 8309915998442000147899852799999998677640688556886489999438988873
Q 000858 1040 SKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLD 1103 (1251)
Q Consensus 1040 ~k~~PsIIfIDEID~L~~~r~~~~~~~~~~~il~~LL~~ldgl~~k~~~~VlVIaTTN~pe~Ld 1103 (1251)
....+.+++|||+|.-+ . ....++++..+... . ...-||.||..|..++
T Consensus 238 ~~~~~~~~~iDEpe~~L----h---p~~~~~l~~~l~~~----~----~~~QviitTHsp~~~~ 286 (308)
T d1e69a_ 238 EIKPSPFYVLDEVDSPL----D---DYNAERFKRLLKEN----S----KHTQFIVITHNKIVME 286 (308)
T ss_dssp TTSCCSEEEEESCCSSC----C---HHHHHHHHHHHHHH----T----TTSEEEEECCCTTGGG
T ss_pred HHCCCCHHHHHHCCCCC----C---HHHHHHHHHHHHHH----C----CCCEEEEEECCHHHHH
T ss_conf 42267445543203357----9---78999999999985----5----4887999989889997
No 315
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=53.72 E-value=4.1 Score=15.12 Aligned_cols=51 Identities=18% Similarity=0.158 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH----CCCEEEEEC
Q ss_conf 12483999999999987403782555217888899329999589774999999999991----993999956
Q 000858 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISM 1017 (1251)
Q Consensus 950 dI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~el----g~pfi~Id~ 1017 (1251)
++...+-+++.+..++.. ++.++.-|.|+|||.++.+++..+ +...+.+-.
T Consensus 111 ~~~~rdyQ~~av~~~l~~-----------------~~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liivp 165 (282)
T d1rifa_ 111 RIEPHWYQKDAVFEGLVN-----------------RRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVP 165 (282)
T ss_dssp ECCCCHHHHHHHHHHHHH-----------------SEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 465646777877999854-----------------9721688711583078899999865325632899976
No 316
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=52.57 E-value=4.2 Score=15.00 Aligned_cols=23 Identities=30% Similarity=0.368 Sum_probs=19.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 32999958977499999999999
Q 000858 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~e 1007 (1251)
..++|+|++|+|||.++..++..
T Consensus 69 Qr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 69 QRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CBCEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
T ss_conf 77876568888858999999975
No 317
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=52.46 E-value=2.4 Score=16.66 Aligned_cols=11 Identities=9% Similarity=0.323 Sum_probs=5.0
Q ss_pred CCEEEEEECCC
Q ss_conf 64899994389
Q 000858 1088 ERVLVLAATNR 1098 (1251)
Q Consensus 1088 ~~VlVIaTTN~ 1098 (1251)
.++++|++.++
T Consensus 300 s~t~~I~~vsp 310 (330)
T d1ry6a_ 300 SKSIMIANISP 310 (330)
T ss_dssp CEEEEEEEECC
T ss_pred CEEEEEEEECC
T ss_conf 70999999798
No 318
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=50.44 E-value=4.6 Score=14.78 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=13.5
Q ss_pred CCCEEEEEECCCC-CCCCHHHHH
Q ss_conf 8648999943898-887399982
Q 000858 1087 KERVLVLAATNRP-FDLDEAVVR 1108 (1251)
Q Consensus 1087 ~~~VlVIaTTN~p-e~Ld~aLlr 1108 (1251)
+.++++|++.++. ..+++.+..
T Consensus 290 ns~t~~I~~isp~~~~~~eTl~T 312 (364)
T d1sdma_ 290 NAKTLMFVNISPAESNLDETHNS 312 (364)
T ss_dssp SSEEEEEEEECCBGGGHHHHHHH
T ss_pred CCEEEEEEEECCCCCHHHHHHHH
T ss_conf 95099999969870018999999
No 319
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=48.90 E-value=4.8 Score=14.63 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=24.8
Q ss_pred CCCEEEECCEECCCCCEEEEECCCEEEECCCCC
Q ss_conf 874499869550898638700798899813897
Q 000858 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGK 228 (1251)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gdev~f~~~~~ 228 (1251)
.+|-|.|||+.+ |. ...+.-||.|.+.....
T Consensus 28 ~~G~V~vNg~~v-Kp-s~~vk~GDvI~i~~~~~ 58 (104)
T d1dm9a_ 28 EGGKVHYNGQRS-KP-SKIVELNATLTLRQGND 58 (104)
T ss_dssp HTTCEEETTEEC-CT-TCBCCTTCEEEEEETTE
T ss_pred HCCCEEECCEEC-CC-CCCCCCCCEEEEEECCE
T ss_conf 839715487414-55-55689999999986894
No 320
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=46.28 E-value=3 Score=16.05 Aligned_cols=24 Identities=17% Similarity=0.416 Sum_probs=12.2
Q ss_pred CCCEEEEEECCCC-CCCCHHHHH-CC
Q ss_conf 8648999943898-887399982-03
Q 000858 1087 KERVLVLAATNRP-FDLDEAVVR-RL 1110 (1251)
Q Consensus 1087 ~~~VlVIaTTN~p-e~Ld~aLlr-RF 1110 (1251)
+.++++|++.++. ..+++.+.. +|
T Consensus 310 ~s~t~~i~~vsp~~~~~~eTl~tL~f 335 (345)
T d1x88a1 310 RTRTSIIATISPASLNLEETLSTLEY 335 (345)
T ss_dssp SSEEEEEEEECCCGGGHHHHHHHHHH
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 97099999969862228999999999
No 321
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=45.78 E-value=2.4 Score=16.65 Aligned_cols=17 Identities=12% Similarity=0.137 Sum_probs=6.9
Q ss_pred HHHHCCCCCEEEEEECC
Q ss_conf 98713999889996225
Q 000858 729 SKLENLPSNVVVIGSHT 745 (1251)
Q Consensus 729 ~~L~~L~g~VivIgs~~ 745 (1251)
+.|+...+-++.+|.|.
T Consensus 108 ~~l~G~n~tifaYGqTG 124 (362)
T d1v8ka_ 108 TIFEGGKATCFAYGQTG 124 (362)
T ss_dssp HHHTTCEEEEEEEESTT
T ss_pred HHHHCCCCEEEEECCCC
T ss_conf 98741681388632578
No 322
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=45.43 E-value=5.4 Score=14.28 Aligned_cols=27 Identities=33% Similarity=0.364 Sum_probs=22.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 899329999589774999999999991
Q 000858 982 KPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1251)
Q Consensus 982 kP~~gILL~GPpGTGKT~LAkAIA~el 1008 (1251)
+|.-+|.+.|-++.|||+|+.++...+
T Consensus 1 k~~ini~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 1 KPHVNVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 997199999478984999999999985
No 323
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=42.39 E-value=6 Score=13.97 Aligned_cols=44 Identities=25% Similarity=0.416 Sum_probs=23.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHH---C-------CCEEEEECCCCCCCCCCC
Q ss_conf 9329999589774999999999991---9-------939999565211001474
Q 000858 984 CKGILLFGPPGTGKTMLAKAVATEA---G-------ANFINISMSSITSKWFGE 1027 (1251)
Q Consensus 984 ~~gILL~GPpGTGKT~LAkAIA~el---g-------~pfi~Id~s~L~s~~~Ge 1027 (1251)
..|.||.=..|+|||..+-++...+ + .+++-+....+...|..+
T Consensus 79 ~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl~~qW~~E 132 (298)
T d1z3ix2 79 SYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNE 132 (298)
T ss_dssp CCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 874698747878899999999999998460116887737998050455789998
No 324
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=40.39 E-value=6.5 Score=13.77 Aligned_cols=17 Identities=35% Similarity=0.599 Sum_probs=14.2
Q ss_pred CEEEEECCCCCHHHHHH
Q ss_conf 32999958977499999
Q 000858 985 KGILLFGPPGTGKTMLA 1001 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LA 1001 (1251)
..|+-||+.|+|||+..
T Consensus 126 ~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 126 ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred EEEEEECCCCCCCCEEE
T ss_conf 13773115787560671
No 325
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=39.98 E-value=6.6 Score=13.73 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=22.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHH-----HCCCEEEEEC
Q ss_conf 2999958977499999999999-----1993999956
Q 000858 986 GILLFGPPGTGKTMLAKAVATE-----AGANFINISM 1017 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~e-----lg~pfi~Id~ 1017 (1251)
-+=|.|-|.+|||+|-.++... .++||.+++.
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~p 48 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDP 48 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCT
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 7999789999899999999778987747899667038
No 326
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=38.15 E-value=7 Score=13.54 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=23.1
Q ss_pred EEECCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 999589774999999999991---993999956
Q 000858 988 LLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 988 LL~GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
+..|..|+|||++|..+|..+ |..+.-+|+
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~VlliD~ 38 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHDVTIVDA 38 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 979999980999999999999968998999959
No 327
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=37.14 E-value=7.2 Score=13.44 Aligned_cols=22 Identities=27% Similarity=0.486 Sum_probs=16.5
Q ss_pred CEEEEECCCCCHHHH--HHHHHHH
Q ss_conf 329999589774999--9999999
Q 000858 985 KGILLFGPPGTGKTM--LAKAVAT 1006 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~--LAkAIA~ 1006 (1251)
+.+++..|+|+|||+ +...+-+
T Consensus 59 ~dvvi~a~TGsGKTlayllp~l~~ 82 (238)
T d1wrba1 59 RDIMACAQTGSGKTAAFLIPIINH 82 (238)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCEEEHHHHHHH
T ss_conf 978998777777511319999999
No 328
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.09 E-value=7.3 Score=13.43 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=36.2
Q ss_pred EEEECCCCCHHHH-HHHHHHHH--HCCCEEEEECCCCCCCCCCCHH---H---------HHHHHHHHHHHCCCCEEEECC
Q ss_conf 9999589774999-99999999--1993999956521100147408---9---------999999998830991599844
Q 000858 987 ILLFGPPGTGKTM-LAKAVATE--AGANFINISMSSITSKWFGEGE---K---------YVKAVFSLASKIAPSVVFVDE 1051 (1251)
Q Consensus 987 ILL~GPpGTGKT~-LAkAIA~e--lg~pfi~Id~s~L~s~~~GesE---k---------~Ir~iF~~A~k~~PsIIfIDE 1051 (1251)
-|++||-.+|||+ |.+.+-.. .+..++.+.... ...+.+... . .....+.. ...+.+|+|||
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ikp~~-D~R~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~I~IDE 81 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAK-DTRYSSSFCTHDRNTMEALPACLLRDVAQE--ALGVAVIGIDE 81 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEEETT-CCC--------------CEEESSGGGGHHH--HHTCSEEEESS
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCEEEECCCCCCEEEEEECHHHHHHH--HCCCCEEEEEH
T ss_conf 999914167899999999999998699099993240-237764565047884000566311566655--23553687306
Q ss_pred CCCC
Q ss_conf 2000
Q 000858 1052 VDSM 1055 (1251)
Q Consensus 1052 ID~L 1055 (1251)
++-+
T Consensus 82 aQFf 85 (133)
T d1xbta1 82 GQFF 85 (133)
T ss_dssp GGGC
T ss_pred HHHH
T ss_conf 6777
No 329
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=34.50 E-value=8 Score=13.16 Aligned_cols=18 Identities=33% Similarity=0.503 Sum_probs=8.0
Q ss_pred EEEECCCCCHHHHHHHHH
Q ss_conf 999958977499999999
Q 000858 987 ILLFGPPGTGKTMLAKAV 1004 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAI 1004 (1251)
+=|.|-|.+|||+|-.++
T Consensus 5 ~GivG~Pn~GKSTlf~~l 22 (278)
T d1jala1 5 CGIVGLPNVGKSTLFNAL 22 (278)
T ss_dssp EEEECCTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
T ss_conf 888899999889999999
No 330
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=34.10 E-value=8.1 Score=13.12 Aligned_cols=16 Identities=38% Similarity=0.717 Sum_probs=8.4
Q ss_pred EEEEECCCCCHHHHHH
Q ss_conf 2999958977499999
Q 000858 986 GILLFGPPGTGKTMLA 1001 (1251)
Q Consensus 986 gILL~GPpGTGKT~LA 1001 (1251)
.++-||..|+|||+..
T Consensus 85 ~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 85 CIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred CEEEEECCCCCCCCCC
T ss_conf 1554422677665232
No 331
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=33.92 E-value=7.5 Score=13.35 Aligned_cols=26 Identities=15% Similarity=0.295 Sum_probs=15.8
Q ss_pred CEEEECCEECCCCCEEEEECCCEEEEC
Q ss_conf 449986955089863870079889981
Q 000858 198 GEVEVNGNVHPKDSQVVLRGGDELVFS 224 (1251)
Q Consensus 198 G~v~vNg~~~~k~~~~~L~~gdev~f~ 224 (1251)
|.|.|||+++... .+.++-||+|.+.
T Consensus 76 ghi~vNgk~v~iP-Sy~vk~GDvIsvk 101 (159)
T d1c06a_ 76 GHILVDGSRVNIP-SYRVKPGQTIAVR 101 (159)
T ss_dssp SCEEETTEECCCS-SCCCCSSCEEEEC
T ss_pred CCEECCCEEEEEC-CEEECCCCEEEEC
T ss_conf 5637133599851-2152278488612
No 332
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=33.15 E-value=8.4 Score=13.02 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=19.2
Q ss_pred EEEEECCCCCHHHHHHHHHHH
Q ss_conf 299995897749999999999
Q 000858 986 GILLFGPPGTGKTMLAKAVAT 1006 (1251)
Q Consensus 986 gILL~GPpGTGKT~LAkAIA~ 1006 (1251)
.|-|.|.|..|||+|..++..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 999990778709999999997
No 333
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=32.47 E-value=8.6 Score=12.94 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=37.5
Q ss_pred EEEECCCCCHHHH-HHHHH--HHHHCCCEEEEECCC--------CCCCCCCCH-----HHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 9999589774999-99999--999199399995652--------110014740-----8999999999883099159984
Q 000858 987 ILLFGPPGTGKTM-LAKAV--ATEAGANFINISMSS--------ITSKWFGEG-----EKYVKAVFSLASKIAPSVVFVD 1050 (1251)
Q Consensus 987 ILL~GPpGTGKT~-LAkAI--A~elg~pfi~Id~s~--------L~s~~~Ges-----Ek~Ir~iF~~A~k~~PsIIfID 1050 (1251)
-|+.||-.+|||+ |.+.+ ....+..++-+.... +.+. .|.. ......++... ....-+|+||
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~~~D~Ry~~~~i~sh-~g~~~~a~~~~~~~~~~~~~-~~~~dvI~ID 87 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSH-MGEKEQAVAIKNSREILKYF-EEDTEVIAID 87 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC-------CEEECT-TSCEEECEEESSSTHHHHHC-CTTCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEC-CCCEEEEEEECCHHHHHHHH-CCCCCEEEEE
T ss_conf 999906066899999999998543377299999642356421114620-36447778823335555542-1355699995
Q ss_pred CCCCC
Q ss_conf 42000
Q 000858 1051 EVDSM 1055 (1251)
Q Consensus 1051 EID~L 1055 (1251)
|++-+
T Consensus 88 E~QFf 92 (141)
T d1xx6a1 88 EVQFF 92 (141)
T ss_dssp SGGGS
T ss_pred EHHHC
T ss_conf 01213
No 334
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=31.84 E-value=8.8 Score=12.88 Aligned_cols=25 Identities=36% Similarity=0.647 Sum_probs=19.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf 3299995897749999999999919
Q 000858 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1251)
Q Consensus 985 ~gILL~GPpGTGKT~LAkAIA~elg 1009 (1251)
++|-+.|..|.|||+|+.++....|
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 0999994889809999999999709
No 335
>d1vioa2 d.66.1.5 (A:0-57) Pseudouridine synthase RsuA N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=31.14 E-value=9 Score=12.80 Aligned_cols=26 Identities=31% Similarity=0.558 Sum_probs=20.7
Q ss_pred CCEEEECCEECCCCCEEEEECCCEEEE
Q ss_conf 744998695508986387007988998
Q 000858 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1251)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gdev~f 223 (1251)
.|-|.|||+.+.+.. +.++.||+|.|
T Consensus 25 ~g~V~Vng~~v~~~~-~~v~~~d~I~~ 50 (58)
T d1vioa2 25 QSAVKINGEIVKSGS-VQISQEDEIYF 50 (58)
T ss_dssp TTCEEETTEECCCTT-CEECTTSCEEE
T ss_pred CCEEEECCEEECCCC-CCCCCCCEEEE
T ss_conf 592899999947788-79899999999
No 336
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=25.89 E-value=11 Score=12.20 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=6.8
Q ss_pred HHHCCCCCEEEEEECC
Q ss_conf 8713999889996225
Q 000858 730 KLENLPSNVVVIGSHT 745 (1251)
Q Consensus 730 ~L~~L~g~VivIgs~~ 745 (1251)
-|+....-++.+|.|.
T Consensus 82 ~l~G~n~ti~aYGqTg 97 (349)
T d2zfia1 82 AFEGYNVCIFAYGQTG 97 (349)
T ss_dssp HHTTCCEEEEEECSTT
T ss_pred HHHCCCCEEEEECCCC
T ss_conf 8733571056302578
No 337
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.65 E-value=11 Score=12.17 Aligned_cols=31 Identities=26% Similarity=0.462 Sum_probs=20.5
Q ss_pred EEEE-CCCCCHHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 9999-589774999999999991---993999956
Q 000858 987 ILLF-GPPGTGKTMLAKAVATEA---GANFINISM 1017 (1251)
Q Consensus 987 ILL~-GPpGTGKT~LAkAIA~el---g~pfi~Id~ 1017 (1251)
|-++ +..|+|||+++..+|..+ |..+.-+|+
T Consensus 5 Iav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99989999881999999999999968998999949
No 338
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.00 E-value=11 Score=12.09 Aligned_cols=23 Identities=13% Similarity=0.125 Sum_probs=11.1
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 1202789815889999999984418
Q 000858 495 ILLSGPAGSEIYQETLAKALAKHFS 519 (1251)
Q Consensus 495 ILLsgp~GsE~Yqe~LaKALA~~f~ 519 (1251)
|-+-|..+ -...+|+-+|-.+-+
T Consensus 20 I~iiGhvd--~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 20 MSVIAHVD--HGKSTLTDSLVQRAG 42 (341)
T ss_dssp EEEECCGG--GTHHHHHHHHHHHHB
T ss_pred EEEEECCC--CCHHHHHHHHHHHCC
T ss_conf 99996888--869999999999779
No 339
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=23.44 E-value=12 Score=11.90 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=24.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 999958977499999999999199399995652
Q 000858 987 ILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1251)
Q Consensus 987 ILL~GPpGTGKT~LAkAIA~elg~pfi~Id~s~ 1019 (1251)
+|+.|+..+||+..|..++.. +.+++++-.+.
T Consensus 2 iLVtGGarSGKS~~AE~l~~~-~~~~~YiAT~~ 33 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGD-APQVLYIATSQ 33 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCS-CSSEEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHHHC-CCCCEEEECCC
T ss_conf 899789876599999999845-89828997467
No 340
>d1v8ca1 d.15.3.1 (A:1-87) MoaD-related protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.57 E-value=13 Score=11.79 Aligned_cols=28 Identities=21% Similarity=0.217 Sum_probs=20.9
Q ss_pred EEEECCEECC--CCCEEEEECCCEEEECCC
Q ss_conf 4998695508--986387007988998138
Q 000858 199 EVEVNGNVHP--KDSQVVLRGGDELVFSPS 226 (1251)
Q Consensus 199 ~v~vNg~~~~--k~~~~~L~~gdev~f~~~ 226 (1251)
.|+|||+.+. .+-..+|+.||||+|-.+
T Consensus 54 ~i~vng~~i~~~~~~~~~l~~gdeV~i~Pp 83 (87)
T d1v8ca1 54 SVFLEGRDVRYLQGLSTPLSPGATLDLFPP 83 (87)
T ss_dssp EEEETTEEGGGTTGGGCBCCTTCEEEEECS
T ss_pred EEEECCEEEECCCCCCCCCCCCCEEEEECC
T ss_conf 999857563035677630799899999788
No 341
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=21.80 E-value=13 Score=11.68 Aligned_cols=56 Identities=23% Similarity=0.309 Sum_probs=37.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 84112483999999999987403782555217888899329999589774999999999991993999956
Q 000858 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1251)
Q Consensus 947 tfddI~Gle~vk~~L~e~I~~pl~rpelf~k~~i~kP~~gILL~GPpGTGKT~LAkAIA~elg~pfi~Id~ 1017 (1251)
.|..-|-+....+.|.+.+.. + .+..+|.|-.|+|||+++.+++...+.|++.|..
T Consensus 9 ~~~p~gDQP~aI~~l~~~l~~----------g-----~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~ 64 (413)
T d1t5la1 9 PYEPQGDQPQAIAKLVDGLRR----------G-----VKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAH 64 (413)
T ss_dssp SSCCCTTHHHHHHHHHHHHHH----------T-----CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECS
T ss_pred CCCCCCCCHHHHHHHHHHHHC----------C-----CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 889999888999999999865----------9-----9858996778748999999999973999899948
Done!