Query 000859
Match_columns 1251
No_of_seqs 1233 out of 8069
Neff 9.3
Searched_HMMs 46136
Date Tue Apr 2 00:36:58 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000859.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000859hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-110 9E-115 1102.9 66.6 922 26-1240 27-957 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.1E-58 2.3E-63 612.9 31.3 500 264-839 70-570 (968)
3 KOG1187 Serine/threonine prote 100.0 7.2E-46 1.6E-50 423.1 27.4 292 932-1237 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 5.4E-46 1.2E-50 395.1 20.1 254 947-1230 80-335 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 3.5E-46 7.7E-51 416.1 15.0 258 947-1238 207-465 (468)
6 KOG1026 Nerve growth factor re 100.0 1.8E-45 4E-50 429.6 16.4 269 944-1238 484-766 (774)
7 KOG0192 Tyrosine kinase specif 100.0 9.4E-45 2E-49 409.8 21.6 260 948-1238 43-307 (362)
8 KOG0472 Leucine-rich repeat pr 100.0 2.5E-46 5.5E-51 394.9 -4.7 475 335-829 44-541 (565)
9 KOG0615 Serine/threonine prote 100.0 3E-43 6.5E-48 375.0 15.5 254 945-1230 171-437 (475)
10 KOG0472 Leucine-rich repeat pr 100.0 1.5E-46 3.1E-51 396.7 -10.1 431 353-813 107-547 (565)
11 KOG0575 Polo-like serine/threo 100.0 8.9E-43 1.9E-47 391.5 18.7 249 946-1230 18-269 (592)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 7.5E-44 1.6E-48 405.0 7.5 274 935-1239 609-896 (996)
13 KOG0595 Serine/threonine-prote 100.0 2E-42 4.3E-47 370.1 17.3 205 945-1166 9-221 (429)
14 KOG0591 NIMA (never in mitosis 100.0 1.3E-43 2.9E-48 358.4 7.8 260 947-1232 20-283 (375)
15 KOG1095 Protein tyrosine kinas 100.0 2.2E-42 4.7E-47 419.2 18.6 272 946-1243 692-970 (1025)
16 KOG0593 Predicted protein kina 100.0 5E-41 1.1E-45 343.3 17.0 266 946-1229 2-283 (396)
17 KOG4721 Serine/threonine prote 100.0 3E-41 6.6E-46 369.5 12.1 250 934-1234 119-368 (904)
18 KOG0592 3-phosphoinositide-dep 100.0 6.5E-41 1.4E-45 369.2 14.1 257 942-1230 69-338 (604)
19 KOG0598 Ribosomal protein S6 k 100.0 8.6E-41 1.9E-45 355.5 14.2 243 945-1222 24-269 (357)
20 KOG3653 Transforming growth fa 100.0 1.1E-39 2.3E-44 353.7 19.6 276 948-1239 212-508 (534)
21 KOG0600 Cdc2-related protein k 100.0 9.4E-40 2E-44 357.1 19.2 267 945-1229 116-399 (560)
22 KOG0661 MAPK related serine/th 100.0 8.5E-41 1.8E-45 362.5 10.2 269 945-1230 9-291 (538)
23 KOG0193 Serine/threonine prote 100.0 4E-40 8.6E-45 367.2 15.0 267 939-1236 385-655 (678)
24 KOG0198 MEKK and related serin 100.0 7.8E-40 1.7E-44 357.3 16.4 264 946-1237 17-283 (313)
25 KOG4278 Protein tyrosine kinas 100.0 7E-40 1.5E-44 361.1 13.8 268 941-1242 262-531 (1157)
26 KOG2052 Activin A type IB rece 100.0 1.1E-38 2.4E-43 343.2 21.4 269 944-1236 209-505 (513)
27 KOG4194 Membrane glycoprotein 100.0 2.4E-40 5.3E-45 364.3 8.6 364 170-536 81-447 (873)
28 KOG0578 p21-activated serine/t 100.0 3.6E-39 7.8E-44 359.7 16.3 251 945-1230 272-523 (550)
29 KOG1094 Discoidin domain recep 100.0 2.8E-39 6.1E-44 356.2 14.3 266 945-1234 537-804 (807)
30 KOG0194 Protein tyrosine kinas 100.0 4.1E-39 8.8E-44 366.7 15.7 264 944-1240 155-426 (474)
31 KOG0659 Cdk activating kinase 100.0 1.7E-38 3.6E-43 320.1 18.0 264 946-1230 2-281 (318)
32 KOG0582 Ste20-like serine/thre 100.0 9.2E-39 2E-43 344.0 16.9 266 945-1230 25-293 (516)
33 KOG0597 Serine-threonine prote 100.0 3.9E-39 8.5E-44 353.8 14.2 248 946-1230 2-251 (808)
34 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-38 3.1E-43 369.9 20.0 269 945-1237 6-337 (338)
35 KOG4194 Membrane glycoprotein 100.0 3.9E-40 8.5E-45 362.6 5.3 367 96-513 79-448 (873)
36 KOG4257 Focal adhesion tyrosin 100.0 4E-39 8.7E-44 356.5 12.8 256 947-1236 390-651 (974)
37 KOG0201 Serine/threonine prote 100.0 1.9E-39 4.1E-44 349.8 9.6 251 945-1230 12-263 (467)
38 KOG0588 Serine/threonine prote 100.0 2E-38 4.3E-43 356.3 15.2 248 947-1231 13-264 (786)
39 KOG0605 NDR and related serine 100.0 6.1E-38 1.3E-42 346.7 16.9 251 944-1223 139-435 (550)
40 KOG0583 Serine/threonine prote 100.0 1.2E-37 2.6E-42 356.3 19.3 249 944-1228 15-273 (370)
41 KOG0616 cAMP-dependent protein 100.0 4.9E-38 1.1E-42 321.4 13.9 237 946-1221 44-283 (355)
42 KOG0618 Serine/threonine phosp 100.0 5.4E-40 1.2E-44 381.5 -0.9 480 318-827 5-487 (1081)
43 KOG1025 Epidermal growth facto 100.0 5.9E-38 1.3E-42 357.7 13.2 256 948-1236 698-959 (1177)
44 PHA02988 hypothetical protein; 100.0 9.5E-37 2.1E-41 344.2 22.8 249 952-1235 26-280 (283)
45 KOG0658 Glycogen synthase kina 100.0 1.3E-37 2.7E-42 330.4 13.6 266 946-1229 24-305 (364)
46 KOG0444 Cytoskeletal regulator 100.0 2.5E-39 5.5E-44 357.2 -0.5 366 454-829 5-375 (1255)
47 KOG0611 Predicted serine/threo 100.0 2.4E-37 5.2E-42 326.2 13.9 250 947-1234 54-307 (668)
48 KOG0580 Serine/threonine prote 100.0 1.3E-37 2.9E-42 309.3 10.8 252 945-1232 21-275 (281)
49 KOG0663 Protein kinase PITSLRE 100.0 6.1E-37 1.3E-41 317.8 15.2 266 945-1230 75-361 (419)
50 cd05096 PTKc_DDR1 Catalytic do 100.0 2E-36 4.3E-41 346.4 20.6 269 946-1233 5-304 (304)
51 KOG0199 ACK and related non-re 100.0 3.2E-37 7E-42 345.8 12.7 252 949-1231 113-369 (1039)
52 cd05104 PTKc_Kit Catalytic dom 100.0 2.5E-36 5.4E-41 354.4 20.8 265 945-1234 34-374 (375)
53 KOG0585 Ca2+/calmodulin-depend 100.0 7.2E-37 1.6E-41 331.2 14.8 265 942-1235 93-377 (576)
54 KOG0033 Ca2+/calmodulin-depend 100.0 2.9E-38 6.3E-43 313.1 3.7 254 946-1232 11-269 (355)
55 KOG0660 Mitogen-activated prot 100.0 1.3E-36 2.9E-41 322.0 16.3 269 944-1230 20-310 (359)
56 cd05106 PTKc_CSF-1R Catalytic 100.0 2.1E-36 4.5E-41 354.7 19.2 266 945-1235 37-373 (374)
57 KOG0618 Serine/threonine phosp 100.0 5.3E-39 1.2E-43 373.2 -3.6 509 244-828 3-512 (1081)
58 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.5E-36 1.2E-40 335.6 20.7 256 946-1234 5-265 (266)
59 KOG2345 Serine/threonine prote 100.0 8.2E-37 1.8E-41 304.8 12.2 271 944-1235 19-301 (302)
60 cd05631 STKc_GRK4 Catalytic do 100.0 4.8E-36 1E-40 339.6 19.6 252 948-1230 2-261 (285)
61 KOG1024 Receptor-like protein 100.0 1.1E-36 2.3E-41 320.9 13.0 273 938-1235 276-556 (563)
62 cd05571 STKc_PKB Catalytic dom 100.0 3.5E-36 7.6E-41 346.8 18.4 243 952-1230 1-251 (323)
63 KOG0574 STE20-like serine/thre 100.0 8.3E-38 1.8E-42 317.7 4.0 248 948-1230 35-283 (502)
64 cd05108 PTKc_EGFR Catalytic do 100.0 1E-35 2.2E-40 342.3 21.2 260 946-1238 7-272 (316)
65 KOG1989 ARK protein kinase fam 100.0 3.2E-36 6.8E-41 354.8 16.7 270 945-1243 36-320 (738)
66 cd05612 STKc_PRKX_like Catalyt 100.0 3.5E-36 7.6E-41 341.6 16.2 245 947-1230 2-254 (291)
67 KOG0594 Protein kinase PCTAIRE 100.0 7.5E-36 1.6E-40 318.6 17.5 276 947-1234 12-308 (323)
68 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.6E-35 3.4E-40 348.0 21.7 268 944-1236 35-399 (400)
69 cd06649 PKc_MEK2 Catalytic dom 100.0 1.5E-35 3.3E-40 342.7 21.1 267 945-1231 4-302 (331)
70 cd05585 STKc_YPK1_like Catalyt 100.0 6E-36 1.3E-40 343.2 17.5 240 954-1229 1-246 (312)
71 PTZ00263 protein kinase A cata 100.0 6.1E-36 1.3E-40 345.5 17.6 246 946-1230 18-271 (329)
72 cd05054 PTKc_VEGFR Catalytic d 100.0 1E-35 2.2E-40 344.2 19.4 268 946-1237 7-336 (337)
73 PF07714 Pkinase_Tyr: Protein 100.0 3.8E-36 8.3E-41 335.1 14.5 250 951-1231 4-259 (259)
74 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-35 2.4E-40 337.2 18.5 268 945-1229 4-284 (288)
75 KOG0694 Serine/threonine prote 100.0 5.9E-36 1.3E-40 340.2 15.2 243 945-1224 367-613 (694)
76 cd05048 PTKc_Ror Catalytic Dom 100.0 3.3E-35 7.2E-40 332.9 21.5 263 946-1234 5-283 (283)
77 KOG4717 Serine/threonine prote 100.0 1E-35 2.2E-40 322.5 15.5 249 946-1230 18-270 (864)
78 cd05593 STKc_PKB_gamma Catalyt 100.0 2.3E-35 5.1E-40 340.3 19.4 243 952-1230 1-251 (328)
79 KOG0599 Phosphorylase kinase g 100.0 5E-36 1.1E-40 301.5 11.9 258 940-1230 11-283 (411)
80 KOG0444 Cytoskeletal regulator 100.0 2E-37 4.3E-42 342.3 1.8 358 389-780 12-374 (1255)
81 PTZ00426 cAMP-dependent protei 100.0 1.5E-35 3.2E-40 342.7 17.6 246 946-1230 30-284 (340)
82 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.5E-35 7.7E-40 327.3 20.0 251 946-1231 4-255 (256)
83 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.3E-35 5.1E-40 341.9 19.1 252 947-1230 2-257 (333)
84 cd05595 STKc_PKB_beta Catalyti 100.0 1.7E-35 3.6E-40 340.9 17.7 242 952-1229 1-250 (323)
85 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.6E-35 5.7E-40 336.9 19.2 269 945-1229 4-287 (303)
86 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4E-35 8.7E-40 332.1 20.4 272 948-1235 6-282 (283)
87 KOG0589 Serine/threonine prote 100.0 7.3E-36 1.6E-40 333.2 13.8 253 946-1230 4-258 (426)
88 cd05584 STKc_p70S6K Catalytic 100.0 3.7E-35 7.9E-40 338.3 19.6 243 952-1230 2-256 (323)
89 cd05072 PTKc_Lyn Catalytic dom 100.0 5.5E-35 1.2E-39 326.8 20.4 256 945-1234 5-261 (261)
90 cd05626 STKc_LATS2 Catalytic d 100.0 4.9E-35 1.1E-39 345.1 21.0 256 947-1230 2-305 (381)
91 cd07848 STKc_CDKL5 Catalytic d 100.0 5.3E-35 1.2E-39 331.9 20.5 268 946-1229 1-283 (287)
92 cd05033 PTKc_EphR Catalytic do 100.0 9.2E-35 2E-39 326.0 22.0 257 946-1234 4-265 (266)
93 cd05115 PTKc_Zap-70 Catalytic 100.0 7.8E-35 1.7E-39 324.4 21.2 251 953-1235 2-256 (257)
94 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.1E-35 6.8E-40 342.3 18.7 269 947-1230 1-290 (338)
95 PLN00034 mitogen-activated pro 100.0 3.5E-35 7.6E-40 343.0 19.0 247 948-1230 76-328 (353)
96 cd05049 PTKc_Trk Catalytic dom 100.0 7E-35 1.5E-39 329.7 20.5 262 946-1233 5-280 (280)
97 cd05111 PTK_HER3 Pseudokinase 100.0 9.8E-35 2.1E-39 327.9 21.6 260 946-1238 7-272 (279)
98 cd05052 PTKc_Abl Catalytic dom 100.0 1E-34 2.2E-39 324.9 20.9 256 946-1235 6-263 (263)
99 cd05068 PTKc_Frk_like Catalyti 100.0 1E-34 2.3E-39 324.5 20.8 256 945-1234 5-261 (261)
100 KOG0577 Serine/threonine prote 100.0 9E-36 1.9E-40 328.0 11.7 246 948-1231 28-279 (948)
101 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.2E-35 1.8E-39 338.2 20.5 269 945-1237 6-342 (343)
102 cd05599 STKc_NDR_like Catalyti 100.0 5.1E-35 1.1E-39 343.7 18.7 256 946-1230 1-296 (364)
103 cd07862 STKc_CDK6 Catalytic do 100.0 9.3E-35 2E-39 330.4 20.1 267 947-1229 2-286 (290)
104 cd05614 STKc_MSK2_N N-terminal 100.0 6.8E-35 1.5E-39 338.0 19.2 253 947-1230 1-267 (332)
105 cd05594 STKc_PKB_alpha Catalyt 100.0 3.8E-35 8.3E-40 338.7 17.0 243 952-1230 1-252 (325)
106 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-35 1.6E-39 341.4 19.5 206 946-1163 1-240 (363)
107 cd05062 PTKc_IGF-1R Catalytic 100.0 8E-35 1.7E-39 328.5 19.1 264 944-1233 4-277 (277)
108 cd05058 PTKc_Met_Ron Catalytic 100.0 1.5E-34 3.2E-39 323.7 21.0 256 952-1236 1-261 (262)
109 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-34 2.9E-39 322.8 20.6 250 953-1235 2-256 (257)
110 cd05071 PTKc_Src Catalytic dom 100.0 1.7E-34 3.7E-39 322.7 21.5 256 945-1235 5-261 (262)
111 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.5E-35 1.4E-39 326.3 17.9 257 944-1234 4-261 (261)
112 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.4E-35 1.2E-39 342.0 17.9 256 946-1230 1-285 (350)
113 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-34 2.5E-39 328.5 19.9 275 947-1235 5-284 (284)
114 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.4E-35 1.8E-39 341.5 19.3 267 944-1235 35-400 (401)
115 cd05084 PTKc_Fes Catalytic dom 100.0 1.9E-34 4.2E-39 320.6 21.2 248 953-1232 2-251 (252)
116 cd05109 PTKc_HER2 Catalytic do 100.0 1.8E-34 4E-39 325.9 21.3 261 945-1238 6-272 (279)
117 cd06650 PKc_MEK1 Catalytic dom 100.0 8.8E-35 1.9E-39 336.2 19.1 266 945-1230 4-299 (333)
118 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-34 3.5E-39 327.1 20.8 262 946-1233 5-282 (283)
119 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2E-34 4.3E-39 326.7 21.6 273 946-1234 4-283 (284)
120 cd05590 STKc_nPKC_eta Catalyti 100.0 6.1E-35 1.3E-39 335.8 17.5 237 952-1224 1-241 (320)
121 cd05629 STKc_NDR_like_fungal C 100.0 8.8E-35 1.9E-39 342.9 19.2 256 946-1230 1-305 (377)
122 cd05588 STKc_aPKC Catalytic do 100.0 1.2E-34 2.6E-39 334.7 19.8 248 952-1229 1-261 (329)
123 cd05591 STKc_nPKC_epsilon Cata 100.0 8.2E-35 1.8E-39 335.3 18.4 243 952-1230 1-254 (321)
124 cd05045 PTKc_RET Catalytic dom 100.0 2.1E-34 4.4E-39 327.5 21.3 265 947-1237 1-289 (290)
125 cd05592 STKc_nPKC_theta_delta 100.0 9.3E-35 2E-39 333.6 18.5 242 952-1229 1-247 (316)
126 PTZ00283 serine/threonine prot 100.0 9.5E-35 2.1E-39 350.8 19.5 260 944-1230 30-297 (496)
127 cd05043 PTK_Ryk Pseudokinase d 100.0 1.8E-34 4E-39 326.2 20.6 267 945-1236 5-278 (280)
128 cd05601 STKc_CRIK Catalytic do 100.0 5.8E-35 1.3E-39 338.2 16.7 254 946-1230 1-263 (330)
129 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-34 3E-39 327.6 19.4 253 947-1230 1-261 (285)
130 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-34 4E-39 325.5 20.3 262 945-1232 5-276 (277)
131 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-34 3.2E-39 333.8 19.9 243 952-1224 1-250 (329)
132 cd05053 PTKc_FGFR Catalytic do 100.0 2.4E-34 5.1E-39 327.6 21.2 266 944-1235 10-292 (293)
133 cd05582 STKc_RSK_N N-terminal 100.0 3.8E-35 8.3E-40 337.7 14.8 239 952-1226 2-245 (318)
134 cd05625 STKc_LATS1 Catalytic d 100.0 1.3E-34 2.8E-39 342.1 19.6 254 947-1229 2-304 (382)
135 cd05589 STKc_PKN Catalytic dom 100.0 9.9E-35 2.1E-39 335.1 18.1 245 948-1229 1-256 (324)
136 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.6E-34 5.6E-39 321.2 20.9 253 946-1233 6-259 (260)
137 KOG0610 Putative serine/threon 100.0 1.2E-34 2.6E-39 310.3 17.1 255 947-1229 78-391 (459)
138 cd05075 PTKc_Axl Catalytic dom 100.0 3.1E-34 6.6E-39 323.0 21.5 261 949-1234 2-271 (272)
139 cd05093 PTKc_TrkB Catalytic do 100.0 2.5E-34 5.5E-39 326.3 20.7 266 946-1238 5-283 (288)
140 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-34 4E-39 321.3 19.0 252 946-1232 4-256 (256)
141 PHA03212 serine/threonine kina 100.0 1.5E-34 3.3E-39 339.7 19.2 262 945-1229 91-375 (391)
142 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-34 3.8E-39 325.9 18.9 249 954-1230 1-257 (280)
143 KOG4279 Serine/threonine prote 100.0 4.6E-35 1E-39 327.2 13.8 243 953-1229 582-831 (1226)
144 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.5E-34 5.5E-39 321.2 19.7 255 945-1234 5-260 (260)
145 cd08228 STKc_Nek6 Catalytic do 100.0 4.3E-34 9.3E-39 320.8 21.5 261 946-1234 2-265 (267)
146 PRK13184 pknD serine/threonine 100.0 2E-34 4.4E-39 353.8 20.4 271 946-1238 2-294 (932)
147 cd05598 STKc_LATS Catalytic do 100.0 9.8E-35 2.1E-39 342.6 16.9 255 947-1230 2-301 (376)
148 cd05060 PTKc_Syk_like Catalyti 100.0 4.5E-34 9.7E-39 318.6 21.3 252 952-1236 1-257 (257)
149 cd05089 PTKc_Tie1 Catalytic do 100.0 3.8E-34 8.3E-39 326.2 21.2 265 946-1239 2-280 (297)
150 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-34 4.6E-39 337.5 19.5 255 944-1230 41-304 (370)
151 cd05095 PTKc_DDR2 Catalytic do 100.0 4.3E-34 9.3E-39 325.8 21.5 269 946-1233 5-296 (296)
152 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-34 4.4E-39 326.4 18.7 261 947-1233 6-282 (283)
153 cd05059 PTKc_Tec_like Catalyti 100.0 2.5E-34 5.4E-39 320.4 19.0 250 947-1231 5-255 (256)
154 cd05587 STKc_cPKC Catalytic do 100.0 1.5E-34 3.2E-39 333.6 17.6 242 947-1224 1-246 (324)
155 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-34 2.8E-39 333.9 17.0 238 952-1225 1-242 (323)
156 cd05035 PTKc_Axl_like Catalyti 100.0 7.4E-34 1.6E-38 320.1 22.6 263 948-1235 1-273 (273)
157 cd05616 STKc_cPKC_beta Catalyt 100.0 1.8E-34 4E-39 332.7 17.9 242 947-1224 1-246 (323)
158 cd05088 PTKc_Tie2 Catalytic do 100.0 4.8E-34 1E-38 326.2 21.2 266 946-1240 7-286 (303)
159 cd05069 PTKc_Yes Catalytic dom 100.0 5.7E-34 1.2E-38 318.3 21.2 254 946-1234 6-260 (260)
160 KOG0200 Fibroblast/platelet-de 100.0 2.2E-34 4.8E-39 353.4 19.4 268 945-1236 295-581 (609)
161 cd05061 PTKc_InsR Catalytic do 100.0 4.6E-34 9.9E-39 324.2 20.5 268 944-1237 4-281 (288)
162 cd05570 STKc_PKC Catalytic dom 100.0 2.2E-34 4.8E-39 331.0 18.0 243 952-1230 1-252 (318)
163 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-34 4.9E-39 330.2 18.0 241 952-1228 1-246 (316)
164 cd05620 STKc_nPKC_delta Cataly 100.0 2.1E-34 4.4E-39 330.8 17.5 241 952-1228 1-246 (316)
165 cd05055 PTKc_PDGFR Catalytic d 100.0 4.7E-34 1E-38 325.9 20.2 259 946-1234 35-301 (302)
166 cd05085 PTKc_Fer Catalytic dom 100.0 8.4E-34 1.8E-38 315.1 21.6 247 953-1232 2-249 (250)
167 cd05051 PTKc_DDR Catalytic dom 100.0 6.1E-34 1.3E-38 324.9 21.0 270 945-1233 4-296 (296)
168 cd05032 PTKc_InsR_like Catalyt 100.0 5.8E-34 1.3E-38 321.7 20.6 263 945-1233 5-277 (277)
169 cd05621 STKc_ROCK2 Catalytic d 100.0 3.4E-34 7.4E-39 335.1 19.3 256 943-1230 40-304 (370)
170 cd05066 PTKc_EphR_A Catalytic 100.0 6.7E-34 1.4E-38 319.1 20.9 258 946-1234 4-266 (267)
171 PTZ00266 NIMA-related protein 100.0 1.7E-34 3.6E-39 355.6 17.3 260 943-1229 10-294 (1021)
172 cd05063 PTKc_EphR_A2 Catalytic 100.0 7E-34 1.5E-38 319.3 21.0 259 945-1234 4-267 (268)
173 PTZ00267 NIMA-related protein 100.0 2.7E-34 5.8E-39 347.3 18.9 252 948-1229 69-322 (478)
174 cd05602 STKc_SGK1 Catalytic do 100.0 2E-34 4.3E-39 332.7 16.9 244 952-1231 1-248 (325)
175 cd05094 PTKc_TrkC Catalytic do 100.0 7.3E-34 1.6E-38 323.0 21.3 264 947-1237 6-285 (291)
176 cd05050 PTKc_Musk Catalytic do 100.0 5.9E-34 1.3E-38 323.4 20.4 263 945-1233 4-288 (288)
177 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.7E-34 1.5E-38 325.5 21.0 267 945-1237 14-299 (304)
178 KOG0983 Mitogen-activated prot 100.0 9.2E-35 2E-39 292.9 12.0 254 945-1230 91-349 (391)
179 cd08219 STKc_Nek3 Catalytic do 100.0 5.8E-34 1.3E-38 317.4 19.8 251 947-1230 1-252 (255)
180 cd07868 STKc_CDK8 Catalytic do 100.0 5E-34 1.1E-38 328.8 19.5 204 951-1162 6-219 (317)
181 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.1E-34 8.9E-39 330.0 18.8 244 952-1225 1-249 (327)
182 cd05097 PTKc_DDR_like Catalyti 100.0 6.9E-34 1.5E-38 323.9 20.4 269 946-1233 5-295 (295)
183 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.6E-34 1.2E-38 326.6 19.6 269 945-1239 17-304 (307)
184 cd05607 STKc_GRK7 Catalytic do 100.0 5.4E-34 1.2E-38 321.3 19.1 249 954-1232 1-252 (277)
185 cd05065 PTKc_EphR_B Catalytic 100.0 1.1E-33 2.3E-38 317.9 21.4 259 946-1234 4-268 (269)
186 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-33 2.3E-38 315.4 21.1 250 946-1234 6-256 (256)
187 cd05056 PTKc_FAK Catalytic dom 100.0 1E-33 2.2E-38 318.3 21.0 259 946-1238 6-269 (270)
188 cd05040 PTKc_Ack_like Catalyti 100.0 9.9E-34 2.1E-38 315.9 20.8 251 952-1232 1-256 (257)
189 cd05604 STKc_SGK3 Catalytic do 100.0 2E-34 4.4E-39 332.6 15.7 244 952-1231 1-248 (325)
190 PTZ00036 glycogen synthase kin 100.0 4.1E-34 9E-39 341.5 18.9 268 945-1230 65-351 (440)
191 cd05603 STKc_SGK2 Catalytic do 100.0 3.4E-34 7.3E-39 330.3 17.3 238 952-1225 1-242 (321)
192 KOG0667 Dual-specificity tyros 100.0 5E-34 1.1E-38 325.5 18.2 198 946-1163 186-392 (586)
193 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.2E-33 2.6E-38 317.5 21.1 256 953-1232 2-268 (269)
194 cd05615 STKc_cPKC_alpha Cataly 100.0 4.6E-34 9.9E-39 329.0 17.9 242 947-1224 1-246 (323)
195 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.8E-34 1.3E-38 326.8 18.7 267 946-1229 6-285 (309)
196 cd06637 STKc_TNIK Catalytic do 100.0 7.3E-34 1.6E-38 319.9 19.2 254 944-1229 4-268 (272)
197 cd07876 STKc_JNK2 Catalytic do 100.0 9E-34 2E-38 332.1 20.6 267 945-1230 20-315 (359)
198 cd08529 STKc_FA2-like Catalyti 100.0 1.4E-33 3.1E-38 314.5 21.0 251 947-1230 1-253 (256)
199 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-33 2.6E-38 317.3 20.4 262 946-1235 2-266 (267)
200 cd05034 PTKc_Src_like Catalyti 100.0 1E-33 2.2E-38 316.6 19.8 256 945-1234 5-261 (261)
201 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-33 2.9E-38 316.0 20.8 254 946-1230 2-260 (263)
202 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.3E-33 2.8E-38 324.5 21.0 267 945-1237 11-296 (314)
203 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-33 6.2E-38 314.2 23.3 262 946-1235 2-266 (267)
204 cd05622 STKc_ROCK1 Catalytic d 100.0 9.2E-34 2E-38 331.9 20.1 261 939-1231 36-305 (371)
205 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-33 3.5E-38 314.6 21.1 255 944-1233 4-259 (260)
206 cd06651 STKc_MEKK3 Catalytic d 100.0 2.3E-33 5.1E-38 314.5 22.2 254 946-1229 2-260 (266)
207 cd05627 STKc_NDR2 Catalytic do 100.0 4.4E-34 9.6E-39 334.6 17.0 254 947-1229 2-292 (360)
208 cd05047 PTKc_Tie Catalytic dom 100.0 2.1E-33 4.6E-38 315.5 21.7 255 953-1236 2-270 (270)
209 cd05057 PTKc_EGFR_like Catalyt 100.0 2.2E-33 4.7E-38 317.2 21.9 259 946-1237 7-271 (279)
210 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2E-33 4.3E-38 318.6 21.5 274 947-1234 5-283 (284)
211 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-33 3.5E-38 326.7 21.2 269 946-1240 12-299 (334)
212 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-33 2.6E-38 319.3 19.6 261 946-1233 5-280 (280)
213 cd06646 STKc_MAP4K5 Catalytic 100.0 9.4E-34 2E-38 318.1 18.6 254 946-1231 9-266 (267)
214 KOG0032 Ca2+/calmodulin-depend 100.0 1.2E-33 2.6E-38 322.6 19.6 254 945-1232 34-295 (382)
215 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-33 2.7E-38 321.0 19.5 268 947-1229 1-284 (288)
216 cd06615 PKc_MEK Catalytic doma 100.0 2.3E-33 5E-38 321.4 21.2 264 947-1231 2-288 (308)
217 cd07853 STKc_NLK Catalytic dom 100.0 2.2E-33 4.7E-38 330.4 21.4 268 947-1230 1-288 (372)
218 cd05042 PTKc_Aatyk Catalytic d 100.0 1.6E-33 3.5E-38 316.4 19.4 256 953-1232 2-268 (269)
219 KOG0579 Ste20-like serine/thre 100.0 8.1E-35 1.8E-39 321.8 8.6 249 949-1230 35-289 (1187)
220 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-33 2.5E-38 330.9 18.6 268 944-1230 15-311 (355)
221 cd05110 PTKc_HER4 Catalytic do 100.0 1.8E-33 4E-38 321.5 19.8 259 946-1237 7-271 (303)
222 cd00192 PTKc Catalytic domain 100.0 3.5E-33 7.6E-38 312.4 21.4 255 952-1232 1-262 (262)
223 cd07867 STKc_CDC2L6 Catalytic 100.0 4.1E-33 8.8E-38 321.4 22.6 203 952-1162 7-219 (317)
224 PTZ00284 protein kinase; Provi 100.0 1.1E-33 2.5E-38 342.2 18.4 266 941-1229 124-437 (467)
225 cd05039 PTKc_Csk_like Catalyti 100.0 3.3E-33 7.2E-38 311.4 20.7 251 945-1234 5-256 (256)
226 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-33 5.8E-38 318.9 20.2 251 945-1230 19-270 (296)
227 cd05044 PTKc_c-ros Catalytic d 100.0 2.3E-33 4.9E-38 315.3 19.4 255 953-1233 2-269 (269)
228 cd05632 STKc_GRK5 Catalytic do 100.0 2.3E-33 5E-38 317.6 19.5 252 948-1230 2-261 (285)
229 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.8E-33 6.1E-38 312.7 19.9 238 953-1231 2-261 (262)
230 cd06619 PKc_MKK5 Catalytic dom 100.0 3.2E-33 7E-38 315.6 20.6 251 947-1230 2-253 (279)
231 cd07875 STKc_JNK1 Catalytic do 100.0 2.3E-33 4.9E-38 329.4 20.0 267 945-1230 23-318 (364)
232 KOG0584 Serine/threonine prote 100.0 4.8E-34 1E-38 321.6 13.4 246 951-1229 45-295 (632)
233 KOG4250 TANK binding protein k 100.0 6.6E-34 1.4E-38 324.2 14.6 282 950-1243 17-319 (732)
234 cd06652 STKc_MEKK2 Catalytic d 100.0 5.8E-33 1.3E-37 311.2 21.8 254 946-1229 2-260 (265)
235 cd05630 STKc_GRK6 Catalytic do 100.0 2.5E-33 5.4E-38 317.2 18.8 252 948-1230 2-261 (285)
236 cd06612 STKc_MST1_2 Catalytic 100.0 4.7E-33 1E-37 310.3 20.2 249 946-1229 3-252 (256)
237 cd05597 STKc_DMPK_like Catalyt 100.0 3E-33 6.5E-38 323.4 19.2 256 946-1230 1-266 (331)
238 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.3E-33 7.1E-38 319.3 19.2 268 945-1229 5-285 (301)
239 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.9E-33 8.5E-38 324.8 20.2 265 944-1230 13-298 (343)
240 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.6E-33 1.4E-37 314.5 21.4 263 947-1229 2-265 (287)
241 cd06631 STKc_YSK4 Catalytic do 100.0 5.1E-33 1.1E-37 311.7 20.2 254 947-1229 1-261 (265)
242 PF00069 Pkinase: Protein kina 100.0 2.3E-33 4.9E-38 313.7 17.3 253 948-1229 1-256 (260)
243 cd05112 PTKc_Itk Catalytic dom 100.0 4.9E-33 1.1E-37 310.1 19.4 252 946-1232 4-256 (256)
244 cd05046 PTK_CCK4 Pseudokinase 100.0 6.7E-33 1.5E-37 312.6 20.7 261 946-1232 5-274 (275)
245 cd06638 STKc_myosinIIIA Cataly 100.0 3.6E-33 7.9E-38 316.7 18.7 265 938-1231 10-284 (286)
246 cd05041 PTKc_Fes_like Catalyti 100.0 7.8E-33 1.7E-37 307.5 20.9 249 952-1232 1-250 (251)
247 cd06613 STKc_MAP4K3_like Catal 100.0 6.5E-33 1.4E-37 310.4 20.3 253 946-1229 3-259 (262)
248 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.2E-33 9E-38 315.7 18.7 262 946-1231 5-267 (284)
249 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.1E-33 1.1E-37 314.8 19.4 260 938-1229 8-278 (282)
250 cd08227 PK_STRAD_alpha Pseudok 100.0 4.2E-33 9E-38 322.2 19.0 270 951-1230 3-307 (327)
251 cd08223 STKc_Nek4 Catalytic do 100.0 7.5E-33 1.6E-37 308.8 20.5 252 947-1230 1-254 (257)
252 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.2E-33 1.8E-37 313.8 20.9 254 947-1230 2-262 (286)
253 cd08221 STKc_Nek9 Catalytic do 100.0 9.4E-33 2E-37 307.9 20.8 251 947-1230 1-253 (256)
254 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-34 2.6E-39 347.7 5.8 256 945-1230 1234-1494(1509)
255 cd06645 STKc_MAP4K3 Catalytic 100.0 3.1E-33 6.7E-38 313.8 16.8 251 947-1229 10-264 (267)
256 cd06643 STKc_SLK Catalytic dom 100.0 1E-32 2.2E-37 312.2 21.0 250 948-1230 7-262 (282)
257 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-32 2.8E-37 308.7 21.6 255 953-1232 2-267 (268)
258 cd06626 STKc_MEKK4 Catalytic d 100.0 1.4E-32 3E-37 308.1 21.7 255 947-1229 1-260 (264)
259 cd06609 STKc_MST3_like Catalyt 100.0 7.6E-33 1.7E-37 311.9 19.8 249 947-1230 2-251 (274)
260 cd06655 STKc_PAK2 Catalytic do 100.0 6.9E-33 1.5E-37 315.3 19.4 250 946-1230 19-269 (296)
261 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.9E-33 8.4E-38 313.7 17.1 239 953-1232 2-274 (274)
262 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-32 3E-37 308.7 21.5 258 946-1229 1-263 (267)
263 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-33 5.6E-38 324.3 15.9 241 954-1229 1-252 (330)
264 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-32 2.7E-37 309.0 21.0 251 948-1229 2-263 (267)
265 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.3E-33 1.1E-37 313.7 18.0 247 948-1230 6-253 (277)
266 cd08217 STKc_Nek2 Catalytic do 100.0 9.1E-33 2E-37 309.7 19.8 255 947-1230 1-262 (265)
267 cd05623 STKc_MRCK_alpha Cataly 100.0 7.7E-33 1.7E-37 320.3 19.8 255 946-1230 1-266 (332)
268 cd05083 PTKc_Chk Catalytic dom 100.0 8E-33 1.7E-37 307.9 19.2 247 946-1233 6-253 (254)
269 cd06605 PKc_MAPKK Catalytic do 100.0 8.7E-33 1.9E-37 309.9 19.6 254 947-1230 2-257 (265)
270 cd06611 STKc_SLK_like Catalyti 100.0 7.2E-33 1.6E-37 313.2 19.0 252 946-1230 5-262 (280)
271 cd06639 STKc_myosinIIIB Cataly 100.0 8.6E-33 1.9E-37 314.4 19.5 264 938-1230 14-287 (291)
272 cd06640 STKc_MST4 Catalytic do 100.0 1.5E-32 3.2E-37 309.9 21.3 248 947-1230 5-253 (277)
273 cd06656 STKc_PAK3 Catalytic do 100.0 8.7E-33 1.9E-37 314.8 19.3 250 945-1229 18-268 (297)
274 cd05624 STKc_MRCK_beta Catalyt 100.0 7.9E-33 1.7E-37 319.8 19.2 255 946-1230 1-266 (331)
275 cd06630 STKc_MEKK1 Catalytic d 100.0 2.2E-32 4.8E-37 307.1 22.4 256 947-1229 1-263 (268)
276 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-32 3E-37 308.7 20.5 255 943-1230 5-265 (268)
277 cd06644 STKc_STK10_LOK Catalyt 100.0 1.9E-32 4.1E-37 311.6 21.9 251 946-1229 12-268 (292)
278 KOG0596 Dual specificity; seri 100.0 2.7E-33 5.8E-38 308.6 13.8 255 945-1230 360-627 (677)
279 KOG0607 MAP kinase-interacting 100.0 2.4E-33 5.3E-38 288.3 12.5 272 937-1229 74-360 (463)
280 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-32 3.6E-37 306.4 20.4 237 952-1231 1-258 (259)
281 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.1E-32 4.6E-37 308.2 21.5 262 948-1234 1-272 (273)
282 cd07839 STKc_CDK5 Catalytic do 100.0 9.2E-33 2E-37 313.1 18.5 267 947-1229 1-280 (284)
283 cd07861 STKc_CDK1_euk Catalyti 100.0 8.2E-33 1.8E-37 313.7 17.8 268 947-1229 1-281 (285)
284 smart00219 TyrKc Tyrosine kina 100.0 2.1E-32 4.5E-37 305.4 20.7 251 949-1231 2-258 (258)
285 cd08218 STKc_Nek1 Catalytic do 100.0 1.8E-32 4E-37 305.5 20.0 251 947-1230 1-253 (256)
286 PHA03211 serine/threonine kina 100.0 6.7E-33 1.4E-37 328.8 17.4 265 945-1230 168-455 (461)
287 cd05574 STKc_phototropin_like 100.0 1.6E-32 3.5E-37 316.1 20.2 255 947-1229 2-288 (316)
288 PHA03209 serine/threonine kina 100.0 1.7E-32 3.7E-37 320.2 20.4 192 944-1159 64-256 (357)
289 PHA03207 serine/threonine kina 100.0 8.3E-33 1.8E-37 327.0 17.8 265 945-1230 91-375 (392)
290 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-32 3.6E-37 312.0 19.4 270 944-1229 3-287 (291)
291 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-32 2.5E-37 312.9 17.9 245 951-1230 27-272 (292)
292 cd06632 STKc_MEKK1_plant Catal 100.0 3.3E-32 7.2E-37 303.8 21.0 248 947-1229 1-254 (258)
293 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.3E-33 1.4E-37 309.4 15.0 239 953-1232 2-258 (258)
294 cd07847 STKc_CDKL1_4 Catalytic 100.0 3E-32 6.5E-37 309.3 20.6 265 947-1229 2-282 (286)
295 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.7E-32 8.1E-37 306.0 20.6 254 947-1230 2-269 (272)
296 cd06608 STKc_myosinIII_like Ca 100.0 3.6E-32 7.9E-37 306.6 20.6 257 944-1229 4-271 (275)
297 cd08220 STKc_Nek8 Catalytic do 100.0 3.2E-32 7E-37 303.6 19.9 250 947-1230 1-253 (256)
298 cd07844 STKc_PCTAIRE_like Cata 100.0 2.8E-32 6E-37 310.3 19.6 269 945-1229 4-287 (291)
299 cd06917 STKc_NAK1_like Catalyt 100.0 3.6E-32 7.9E-37 307.0 20.4 249 947-1230 2-255 (277)
300 KOG1006 Mitogen-activated prot 100.0 1.9E-34 4E-39 289.9 1.4 256 947-1230 65-327 (361)
301 KOG1035 eIF-2alpha kinase GCN2 100.0 6.7E-33 1.4E-37 331.5 14.1 252 946-1229 479-870 (1351)
302 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.4E-32 5.2E-37 310.1 18.0 267 946-1229 1-282 (286)
303 cd05580 STKc_PKA Catalytic dom 100.0 2.7E-32 5.8E-37 310.0 18.3 245 946-1229 1-253 (290)
304 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.4E-32 1.6E-36 302.0 21.5 254 946-1229 2-260 (264)
305 cd07831 STKc_MOK Catalytic dom 100.0 7.2E-32 1.6E-36 305.5 21.7 265 948-1230 1-279 (282)
306 cd06617 PKc_MKK3_6 Catalytic d 100.0 5E-32 1.1E-36 307.0 20.2 254 946-1229 1-260 (283)
307 cd08528 STKc_Nek10 Catalytic d 100.0 4.6E-32 9.9E-37 304.7 19.7 256 947-1233 1-269 (269)
308 cd05609 STKc_MAST Catalytic do 100.0 3.9E-32 8.5E-37 311.0 19.4 259 946-1233 1-273 (305)
309 cd06647 STKc_PAK_I Catalytic d 100.0 4.8E-32 1E-36 308.1 19.5 250 946-1230 19-269 (293)
310 cd07849 STKc_ERK1_2_like Catal 100.0 2.5E-32 5.4E-37 317.0 17.5 278 945-1236 4-300 (336)
311 KOG0666 Cyclin C-dependent kin 100.0 2.3E-33 5E-38 287.7 7.6 277 946-1230 24-337 (438)
312 cd06641 STKc_MST3 Catalytic do 100.0 7.1E-32 1.5E-36 304.4 20.4 248 947-1230 5-253 (277)
313 cd06623 PKc_MAPKK_plant_like C 100.0 8.7E-32 1.9E-36 301.6 21.0 252 947-1230 2-256 (264)
314 cd06659 STKc_PAK6 Catalytic do 100.0 3.3E-32 7.1E-37 309.9 17.7 246 950-1230 25-271 (297)
315 PHA02882 putative serine/threo 100.0 6.7E-32 1.4E-36 306.9 20.1 264 945-1231 11-293 (294)
316 KOG0586 Serine/threonine prote 100.0 1.4E-32 3.1E-37 309.7 14.1 255 945-1236 55-312 (596)
317 cd07841 STKc_CDK7 Catalytic do 100.0 8.3E-32 1.8E-36 307.5 20.6 266 947-1229 1-281 (298)
318 cd07860 STKc_CDK2_3 Catalytic 100.0 4.9E-32 1.1E-36 307.2 18.3 267 947-1229 1-280 (284)
319 cd07855 STKc_ERK5 Catalytic do 100.0 4.8E-32 1E-36 314.3 18.5 272 946-1230 5-294 (334)
320 KOG0604 MAP kinase-activated p 100.0 1.5E-32 3.2E-37 280.8 12.4 249 952-1231 68-323 (400)
321 cd07845 STKc_CDK10 Catalytic d 100.0 9.1E-32 2E-36 308.7 19.8 267 945-1230 6-290 (309)
322 cd05578 STKc_Yank1 Catalytic d 100.0 5.4E-32 1.2E-36 302.0 17.3 248 947-1228 1-253 (258)
323 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-31 3.1E-36 303.0 20.7 248 947-1229 20-268 (285)
324 cd07832 STKc_CCRK Catalytic do 100.0 7.5E-32 1.6E-36 306.0 18.4 268 947-1230 1-282 (286)
325 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-31 3.7E-36 302.9 21.3 252 944-1229 17-269 (286)
326 cd07843 STKc_CDC2L1 Catalytic 100.0 8.5E-32 1.8E-36 306.6 18.8 268 946-1229 5-289 (293)
327 cd06607 STKc_TAO Catalytic dom 100.0 1.8E-31 3.9E-36 305.8 21.5 248 946-1231 15-268 (307)
328 KOG0690 Serine/threonine prote 100.0 8.5E-33 1.8E-37 284.4 9.2 264 944-1243 166-434 (516)
329 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-31 3.1E-36 312.7 20.8 268 944-1230 14-311 (353)
330 cd08225 STKc_Nek5 Catalytic do 100.0 8.8E-32 1.9E-36 300.2 18.1 251 947-1230 1-254 (257)
331 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-31 2.5E-36 304.9 19.2 266 947-1229 2-284 (288)
332 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-31 2.4E-36 311.8 19.1 273 945-1230 6-295 (337)
333 cd06616 PKc_MKK4 Catalytic dom 100.0 7.3E-32 1.6E-36 306.3 16.8 256 947-1230 5-267 (288)
334 KOG0986 G protein-coupled rece 100.0 1.3E-32 2.7E-37 296.1 9.7 252 943-1225 182-436 (591)
335 cd07865 STKc_CDK9 Catalytic do 100.0 2.1E-31 4.6E-36 306.2 20.2 270 945-1229 11-306 (310)
336 cd07836 STKc_Pho85 Catalytic d 100.0 2.1E-31 4.6E-36 302.0 19.9 268 947-1229 1-280 (284)
337 cd05577 STKc_GRK Catalytic dom 100.0 1.7E-31 3.7E-36 301.3 18.8 245 954-1229 1-253 (277)
338 cd05572 STKc_cGK_PKG Catalytic 100.0 2E-31 4.4E-36 298.2 19.0 243 954-1229 1-251 (262)
339 cd06635 STKc_TAO1 Catalytic do 100.0 4.1E-31 8.9E-36 304.1 21.8 253 948-1238 27-285 (317)
340 cd07835 STKc_CDK1_like Catalyt 100.0 2.1E-31 4.5E-36 301.8 19.0 266 948-1229 1-279 (283)
341 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-31 4.6E-36 300.4 18.9 243 953-1230 1-255 (279)
342 cd08216 PK_STRAD Pseudokinase 100.0 3.3E-31 7.1E-36 305.0 20.4 266 954-1230 10-295 (314)
343 cd05122 PKc_STE Catalytic doma 100.0 5.2E-31 1.1E-35 293.0 21.1 249 947-1229 1-250 (253)
344 cd07842 STKc_CDK8_like Catalyt 100.0 6.4E-31 1.4E-35 303.1 22.2 276 947-1229 1-312 (316)
345 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-31 4.2E-36 298.9 17.4 252 954-1235 1-259 (265)
346 cd07837 STKc_CdkB_plant Cataly 100.0 3.9E-31 8.6E-36 301.5 20.2 268 947-1229 2-290 (295)
347 KOG1151 Tousled-like protein k 100.0 3E-32 6.6E-37 290.5 10.1 262 945-1229 462-740 (775)
348 cd06618 PKc_MKK7 Catalytic dom 100.0 3.4E-31 7.3E-36 301.9 19.2 253 946-1231 15-274 (296)
349 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-31 5.5E-36 308.5 18.2 278 945-1238 4-301 (337)
350 cd07864 STKc_CDK12 Catalytic d 100.0 4.1E-31 8.9E-36 302.5 19.4 272 944-1229 5-298 (302)
351 cd05583 STKc_MSK_N N-terminal 100.0 3.1E-31 6.7E-36 301.1 18.2 265 947-1242 1-275 (288)
352 cd07840 STKc_CDK9_like Catalyt 100.0 5.8E-31 1.3E-35 298.9 20.4 268 948-1229 1-283 (287)
353 KOG0671 LAMMER dual specificit 100.0 6.7E-32 1.5E-36 286.6 11.5 263 943-1230 86-406 (415)
354 cd06606 STKc_MAPKKK Catalytic 100.0 9E-31 2E-35 292.4 21.3 254 947-1229 1-256 (260)
355 cd06657 STKc_PAK4 Catalytic do 100.0 3.9E-31 8.5E-36 300.1 18.5 243 952-1229 26-269 (292)
356 KOG0662 Cyclin-dependent kinas 100.0 2.7E-31 5.9E-36 251.1 14.1 266 947-1229 3-282 (292)
357 cd05611 STKc_Rim15_like Cataly 100.0 4.1E-31 8.9E-36 295.4 18.1 245 952-1232 2-250 (260)
358 PHA03390 pk1 serine/threonine- 100.0 8.4E-31 1.8E-35 293.5 20.1 244 944-1229 12-261 (267)
359 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-30 2.5E-35 291.2 20.9 253 947-1230 1-255 (258)
360 cd08226 PK_STRAD_beta Pseudoki 100.0 6E-31 1.3E-35 304.3 19.0 267 953-1230 5-308 (328)
361 PLN00009 cyclin-dependent kina 100.0 6.1E-31 1.3E-35 299.7 18.7 268 946-1229 2-283 (294)
362 cd08530 STKc_CNK2-like Catalyt 100.0 7.6E-31 1.6E-35 292.5 18.8 250 947-1229 1-252 (256)
363 cd07838 STKc_CDK4_6_like Catal 100.0 2.1E-30 4.6E-35 294.3 22.6 267 948-1229 1-283 (287)
364 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-30 2.8E-35 295.4 20.7 266 948-1230 1-280 (283)
365 cd06627 STKc_Cdc7_like Catalyt 100.0 1.1E-30 2.3E-35 290.9 19.7 248 947-1229 1-250 (254)
366 cd05613 STKc_MSK1_N N-terminal 100.0 8E-31 1.7E-35 298.0 19.0 252 947-1229 1-267 (290)
367 KOG0669 Cyclin T-dependent kin 100.0 1.5E-32 3.2E-37 273.6 3.9 269 945-1230 16-315 (376)
368 PHA03210 serine/threonine kina 100.0 4.3E-31 9.3E-36 320.3 17.3 276 944-1230 146-454 (501)
369 cd05606 STKc_beta_ARK Catalyti 100.0 1.2E-30 2.7E-35 294.2 19.8 242 953-1229 1-254 (278)
370 cd07854 STKc_MAPK4_6 Catalytic 100.0 5E-31 1.1E-35 306.5 16.8 269 946-1229 5-299 (342)
371 cd05118 STKc_CMGC Catalytic do 100.0 1E-30 2.2E-35 296.3 18.7 265 948-1229 1-279 (283)
372 cd05581 STKc_PDK1 Catalytic do 100.0 6E-31 1.3E-35 297.6 16.6 252 946-1229 1-276 (280)
373 cd06634 STKc_TAO2 Catalytic do 100.0 1.6E-30 3.4E-35 297.9 20.0 248 948-1233 17-270 (308)
374 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-30 3.1E-35 301.9 19.8 275 947-1235 1-296 (330)
375 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-30 3.2E-35 301.5 19.8 272 947-1230 1-292 (332)
376 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-30 2.7E-35 303.2 18.9 269 945-1237 14-306 (342)
377 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-30 3.5E-35 302.2 19.8 273 944-1236 13-306 (343)
378 KOG0587 Traf2- and Nck-interac 100.0 9.4E-31 2E-35 303.9 17.4 256 943-1229 16-281 (953)
379 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-30 3.3E-35 299.3 19.1 274 945-1229 7-307 (311)
380 cd06633 STKc_TAO3 Catalytic do 100.0 2.9E-30 6.4E-35 296.2 21.4 245 948-1230 23-273 (313)
381 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.9E-31 2.1E-35 301.8 17.5 269 941-1230 5-288 (328)
382 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.4E-30 5.2E-35 301.0 20.3 272 939-1230 10-300 (345)
383 KOG4236 Serine/threonine prote 100.0 2.8E-31 6.1E-36 288.8 10.8 245 952-1230 570-819 (888)
384 cd08222 STKc_Nek11 Catalytic d 100.0 3.2E-30 7E-35 288.1 18.3 251 947-1229 1-256 (260)
385 KOG0612 Rho-associated, coiled 100.0 3E-31 6.4E-36 314.7 9.3 256 943-1230 72-338 (1317)
386 cd07851 STKc_p38 Catalytic dom 100.0 3.1E-30 6.7E-35 300.0 17.5 266 944-1229 13-297 (343)
387 PTZ00024 cyclin-dependent prot 100.0 4.5E-30 9.8E-35 298.2 18.8 270 946-1229 8-312 (335)
388 cd07829 STKc_CDK_like Catalyti 100.0 5.9E-30 1.3E-34 289.8 19.2 264 948-1229 1-278 (282)
389 cd05123 STKc_AGC Catalytic dom 100.0 4.8E-30 1E-34 284.9 17.6 237 954-1226 1-240 (250)
390 KOG0696 Serine/threonine prote 100.0 1.1E-30 2.4E-35 276.6 8.9 242 944-1221 347-592 (683)
391 cd05610 STKc_MASTL Catalytic d 100.0 1E-29 2.2E-34 317.6 19.2 146 946-1103 4-152 (669)
392 KOG0984 Mitogen-activated prot 100.0 1.5E-30 3.3E-35 252.4 8.4 207 946-1165 46-258 (282)
393 KOG0603 Ribosomal protein S6 k 100.0 2.7E-30 5.9E-35 293.1 11.8 242 945-1232 321-565 (612)
394 KOG1027 Serine/threonine prote 100.0 3.1E-30 6.8E-35 298.2 9.4 248 948-1229 511-766 (903)
395 KOG0614 cGMP-dependent protein 100.0 1.9E-30 4.2E-35 282.1 5.5 248 948-1230 422-677 (732)
396 cd05576 STKc_RPK118_like Catal 100.0 4.5E-29 9.7E-34 274.2 15.3 220 957-1225 4-224 (237)
397 KOG1290 Serine/threonine prote 100.0 8.1E-29 1.8E-33 269.6 15.8 134 946-1089 78-222 (590)
398 KOG0608 Warts/lats-like serine 100.0 2.7E-29 5.9E-34 279.0 12.3 219 937-1167 620-879 (1034)
399 KOG0668 Casein kinase II, alph 100.0 1.8E-29 4E-34 248.2 9.4 265 944-1230 36-322 (338)
400 PLN03225 Serine/threonine-prot 100.0 4.2E-29 9.2E-34 303.7 14.3 269 944-1230 130-450 (566)
401 PLN03224 probable serine/threo 100.0 4.6E-28 1E-32 286.1 20.8 274 944-1230 143-500 (507)
402 smart00220 S_TKc Serine/Threon 100.0 7.7E-28 1.7E-32 265.7 18.5 239 958-1229 1-240 (244)
403 KOG0664 Nemo-like MAPK-related 100.0 2.1E-29 4.5E-34 253.6 5.1 268 948-1231 55-344 (449)
404 KOG0695 Serine/threonine prote 100.0 2.6E-28 5.7E-33 252.0 11.1 249 944-1222 248-502 (593)
405 KOG1152 Signal transduction se 99.9 5.3E-28 1.1E-32 267.5 7.7 207 936-1160 551-770 (772)
406 KOG0665 Jun-N-terminal kinase 99.9 5.4E-27 1.2E-31 243.5 9.5 262 945-1230 16-310 (369)
407 KOG0576 Mitogen-activated prot 99.9 3E-27 6.5E-32 266.1 6.8 253 945-1229 14-270 (829)
408 KOG1345 Serine/threonine kinas 99.9 1.6E-26 3.4E-31 233.5 9.6 249 946-1227 24-281 (378)
409 KOG0670 U4/U6-associated splic 99.9 5.3E-26 1.1E-30 248.3 12.0 264 944-1230 430-746 (752)
410 cd00180 PKc Catalytic domain o 99.9 6E-25 1.3E-29 236.7 18.9 211 954-1230 1-214 (215)
411 KOG4237 Extracellular matrix p 99.9 3.3E-27 7.2E-32 250.7 -2.1 401 264-681 68-498 (498)
412 KOG1167 Serine/threonine prote 99.9 3.8E-25 8.3E-30 239.2 12.4 272 941-1230 31-381 (418)
413 KOG4237 Extracellular matrix p 99.9 4.9E-27 1.1E-31 249.4 -3.9 277 96-373 68-359 (498)
414 smart00221 STYKc Protein kinas 99.9 5.1E-24 1.1E-28 232.2 17.8 200 948-1161 1-202 (225)
415 KOG0195 Integrin-linked kinase 99.9 4.4E-25 9.5E-30 222.4 5.0 247 951-1235 195-447 (448)
416 PLN03210 Resistant to P. syrin 99.9 7.2E-23 1.6E-27 270.7 22.0 346 113-491 552-904 (1153)
417 PLN03210 Resistant to P. syrin 99.9 4E-23 8.7E-28 273.1 18.7 306 506-827 591-904 (1153)
418 PRK15387 E3 ubiquitin-protein 99.9 3.8E-23 8.3E-28 251.9 15.0 268 456-815 201-468 (788)
419 smart00750 KIND kinase non-cat 99.9 3.6E-23 7.7E-28 216.1 11.9 170 1030-1237 1-172 (176)
420 PLN00181 protein SPA1-RELATED; 99.9 1.7E-23 3.8E-28 268.9 10.2 201 999-1230 28-265 (793)
421 PRK15387 E3 ubiquitin-protein 99.9 1E-22 2.3E-27 248.1 15.2 266 433-765 202-467 (788)
422 KOG1164 Casein kinase (serine/ 99.9 1.6E-21 3.4E-26 223.3 20.1 267 947-1239 19-302 (322)
423 KOG1165 Casein kinase (serine/ 99.9 1.2E-21 2.7E-26 204.0 17.2 265 946-1237 28-302 (449)
424 KOG1163 Casein kinase (serine/ 99.9 9.5E-22 2E-26 195.8 14.3 272 945-1243 14-293 (341)
425 PRK09188 serine/threonine prot 99.9 2E-21 4.4E-26 220.1 15.5 168 944-1133 16-194 (365)
426 PRK15370 E3 ubiquitin-protein 99.8 2.7E-21 6E-26 237.9 12.9 287 458-806 180-471 (754)
427 KOG0590 Checkpoint kinase and 99.8 1.2E-21 2.6E-26 237.0 7.0 257 950-1230 322-585 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 1E-20 2.2E-25 232.8 13.3 203 600-832 242-448 (754)
429 KOG1240 Protein kinase contain 99.8 1.2E-20 2.7E-25 224.1 5.4 251 947-1231 24-292 (1431)
430 COG0515 SPS1 Serine/threonine 99.8 8.4E-19 1.8E-23 204.2 19.9 263 948-1230 2-275 (384)
431 PRK10359 lipopolysaccharide co 99.8 1.6E-19 3.5E-24 189.5 10.0 174 944-1153 29-216 (232)
432 KOG0617 Ras suppressor protein 99.8 4.5E-21 9.8E-26 181.0 -1.7 164 595-764 29-193 (264)
433 cd05147 RIO1_euk RIO kinase fa 99.8 5.7E-19 1.2E-23 184.5 11.9 139 952-1105 3-167 (190)
434 KOG4158 BRPK/PTEN-induced prot 99.8 3.1E-19 6.8E-24 190.0 8.8 204 1001-1234 274-514 (598)
435 KOG0617 Ras suppressor protein 99.8 3.4E-21 7.4E-26 181.8 -5.3 121 690-815 74-195 (264)
436 KOG1023 Natriuretic peptide re 99.8 3.1E-18 6.8E-23 196.7 13.9 221 997-1239 1-229 (484)
437 cd05145 RIO1_like RIO kinase f 99.8 5.7E-18 1.2E-22 178.1 14.8 139 951-1105 2-167 (190)
438 PRK12274 serine/threonine prot 99.7 3.9E-18 8.5E-23 174.5 11.0 190 949-1162 5-210 (218)
439 KOG0603 Ribosomal protein S6 k 99.7 4.6E-19 1E-23 202.2 2.8 236 954-1235 2-245 (612)
440 PF14531 Kinase-like: Kinase-l 99.7 4.9E-18 1.1E-22 183.8 7.4 239 948-1221 14-288 (288)
441 cd00116 LRR_RI Leucine-rich re 99.7 9.4E-20 2E-24 210.2 -6.8 250 75-324 2-291 (319)
442 cd00116 LRR_RI Leucine-rich re 99.7 2.8E-19 6E-24 206.3 -4.4 254 147-421 2-291 (319)
443 PRK10345 hypothetical protein; 99.7 1.4E-16 3E-21 167.7 13.7 140 948-1103 4-157 (210)
444 KOG1166 Mitotic checkpoint ser 99.7 2.5E-16 5.5E-21 193.2 13.2 250 944-1236 696-955 (974)
445 smart00090 RIO RIO-like kinase 99.7 6E-16 1.3E-20 167.4 13.3 142 947-1105 29-198 (237)
446 PLN03150 hypothetical protein; 99.6 4.5E-16 9.7E-21 192.2 11.4 152 23-179 367-527 (623)
447 cd05144 RIO2_C RIO kinase fami 99.6 2E-15 4.4E-20 160.2 13.8 138 946-1105 15-175 (198)
448 KOG0606 Microtubule-associated 99.6 1.7E-16 3.8E-21 189.5 5.9 214 945-1225 82-307 (1205)
449 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.8E-16 6E-21 176.3 5.4 176 1019-1227 330-509 (516)
450 PRK14879 serine/threonine prot 99.6 6E-15 1.3E-19 158.8 14.4 135 952-1104 2-143 (211)
451 PRK09605 bifunctional UGMP fam 99.6 6.1E-15 1.3E-19 180.7 12.9 146 937-1104 324-476 (535)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 9.9E-15 2.1E-19 155.5 12.8 131 953-1104 1-138 (199)
453 KOG0532 Leucine-rich repeat (L 99.6 5.5E-16 1.2E-20 173.1 0.8 173 650-832 78-250 (722)
454 KOG0532 Leucine-rich repeat (L 99.5 1.7E-15 3.6E-20 169.4 -2.9 196 620-826 72-270 (722)
455 cd05119 RIO RIO kinase family, 99.5 1.6E-13 3.4E-18 144.6 12.1 136 951-1105 2-164 (187)
456 KOG0590 Checkpoint kinase and 99.5 4.6E-15 1E-19 180.0 0.4 257 946-1229 20-285 (601)
457 PRK01723 3-deoxy-D-manno-octul 99.5 3.6E-13 7.8E-18 146.2 14.7 138 951-1104 36-191 (239)
458 cd05120 APH_ChoK_like Aminogly 99.5 5.3E-13 1.1E-17 135.4 13.2 135 950-1104 2-138 (155)
459 PLN03150 hypothetical protein; 99.4 1.6E-13 3.4E-18 169.7 7.5 107 720-827 419-526 (623)
460 COG4886 Leucine-rich repeat (L 99.4 3.8E-13 8.2E-18 159.7 10.5 243 577-832 118-361 (394)
461 COG4886 Leucine-rich repeat (L 99.4 9.8E-13 2.1E-17 156.2 9.0 197 460-688 97-294 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.3 7.9E-12 1.7E-16 147.6 12.6 142 952-1106 123-308 (437)
463 KOG1266 Protein kinase [Signal 99.3 8.4E-12 1.8E-16 131.1 7.4 207 997-1231 121-332 (458)
464 KOG3207 Beta-tubulin folding c 99.2 1.7E-12 3.8E-17 141.5 0.6 208 620-829 118-339 (505)
465 KOG1259 Nischarin, modulator o 99.2 2.8E-12 6.1E-17 132.5 1.2 133 646-786 283-416 (490)
466 cd05151 ChoK Choline Kinase (C 99.1 2.2E-10 4.8E-15 118.5 11.1 129 952-1103 4-135 (170)
467 KOG0601 Cyclin-dependent kinas 99.1 6.8E-11 1.5E-15 136.5 7.8 250 948-1229 116-378 (524)
468 PRK04750 ubiB putative ubiquin 99.1 2.1E-10 4.5E-15 136.6 11.7 147 946-1107 120-316 (537)
469 KOG1909 Ran GTPase-activating 99.1 2.8E-12 6E-17 136.6 -4.1 241 72-323 31-310 (382)
470 KOG1243 Protein kinase [Genera 99.1 6.5E-10 1.4E-14 129.1 14.3 170 966-1158 33-202 (690)
471 KOG1259 Nischarin, modulator o 99.1 1.8E-11 4E-16 126.5 0.5 140 613-758 274-414 (490)
472 KOG0531 Protein phosphatase 1, 99.1 2.6E-11 5.6E-16 143.9 1.3 150 407-565 71-221 (414)
473 KOG0531 Protein phosphatase 1, 99.1 3.7E-11 8.1E-16 142.5 1.9 268 409-736 50-322 (414)
474 KOG1909 Ran GTPase-activating 99.0 1.5E-11 3.2E-16 131.1 -2.3 201 498-732 86-311 (382)
475 cd05146 RIO3_euk RIO kinase fa 99.0 2.7E-09 5.9E-14 110.1 13.6 136 952-1105 3-174 (197)
476 PF14580 LRR_9: Leucine-rich r 99.0 2E-10 4.4E-15 116.0 4.2 121 672-822 20-146 (175)
477 KOG4658 Apoptotic ATPase [Sign 99.0 5.7E-10 1.2E-14 140.6 7.6 282 92-399 520-809 (889)
478 PF08263 LRRNT_2: Leucine rich 99.0 4.9E-10 1.1E-14 84.9 4.3 41 27-67 2-43 (43)
479 KOG0601 Cyclin-dependent kinas 99.0 6.2E-10 1.3E-14 128.6 6.7 248 943-1232 262-516 (524)
480 KOG3207 Beta-tubulin folding c 99.0 1.3E-10 2.8E-15 127.2 0.8 161 236-398 118-285 (505)
481 PF14580 LRR_9: Leucine-rich r 99.0 3.5E-10 7.7E-15 114.3 3.5 83 430-517 17-101 (175)
482 cd05154 ACAD10_11_like Acyl-Co 99.0 5E-09 1.1E-13 113.8 12.8 145 952-1104 4-206 (223)
483 COG4248 Uncharacterized protei 98.9 4.2E-08 9.1E-13 107.2 17.1 270 949-1235 14-301 (637)
484 KOG0606 Microtubule-associated 98.9 6.7E-10 1.5E-14 134.1 2.8 251 946-1225 804-1084(1205)
485 COG3642 Mn2+-dependent serine/ 98.8 3E-08 6.6E-13 98.0 12.6 131 953-1104 3-140 (204)
486 KOG3087 Serine/threonine prote 98.8 4.5E-08 9.8E-13 95.9 12.6 144 950-1104 11-165 (229)
487 KOG4658 Apoptotic ATPase [Sign 98.8 1E-08 2.2E-13 129.4 7.8 129 191-322 523-653 (889)
488 PRK15123 lipopolysaccharide co 98.7 1.9E-07 4.2E-12 102.4 15.8 144 952-1104 28-194 (268)
489 KOG1859 Leucine-rich repeat pr 98.7 2.7E-10 6E-15 131.1 -8.1 129 697-832 166-295 (1096)
490 PF01163 RIO1: RIO1 family; I 98.7 1.1E-07 2.4E-12 98.0 11.5 125 961-1104 1-155 (188)
491 KOG3741 Poly(A) ribonuclease s 98.6 6.7E-07 1.4E-11 100.9 16.4 176 958-1158 288-475 (655)
492 PF13855 LRR_8: Leucine rich r 98.6 3.5E-08 7.5E-13 82.0 3.6 59 240-298 2-60 (61)
493 PF13855 LRR_8: Leucine rich r 98.6 3.2E-08 7E-13 82.2 3.4 61 263-323 1-61 (61)
494 COG0478 RIO-like serine/threon 98.6 3.5E-07 7.6E-12 96.0 11.6 134 950-1104 95-251 (304)
495 KOG1859 Leucine-rich repeat pr 98.6 2.1E-09 4.5E-14 124.0 -5.5 129 215-349 164-292 (1096)
496 KOG2137 Protein kinase [Signal 98.5 4.1E-08 8.8E-13 115.0 2.1 153 1059-1229 106-264 (700)
497 PRK09902 hypothetical protein; 98.5 2.9E-06 6.3E-11 87.7 14.5 141 954-1104 26-179 (216)
498 KOG4579 Leucine-rich repeat (L 98.4 1.8E-08 4E-13 93.1 -2.3 139 696-840 28-170 (177)
499 KOG2982 Uncharacterized conser 98.4 1.6E-07 3.4E-12 98.1 2.5 182 527-708 70-262 (418)
500 KOG4579 Leucine-rich repeat (L 98.4 3.6E-08 7.9E-13 91.2 -2.2 84 671-756 53-136 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.9e-110 Score=1102.91 Aligned_cols=922 Identities=36% Similarity=0.595 Sum_probs=630.9
Q ss_pred CHHhHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCccccEEEcCCCCeEEEeccCCccCCCCCCCCCCCCCcccEEEccCC
Q 000859 26 KDEELSVLLEIKKSFTADPENVLHAWNQSNQNLCTWRGITCGSSSARVVSLNLSGLSLAGSISPSLGRLQSLIHLDLSSN 105 (1251)
Q Consensus 26 ~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~n 105 (1251)
.++|++||++||+++. ||.+.+.+|+. +.+||.|.||+|++ .++|+.|+|+++++.|.+++.+..+++|++|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 6789999999999994 78888999975 46899999999985 468999999999999988888888999999999999
Q ss_pred CCCCCcCcccc-ccCcccEEecccccccCCCCcccCCCccccEEEeccCCCCCCCCCcccccccccccccccCCCCCCCC
Q 000859 106 SLTGPIPTALS-NLSSLESLLLFSNQLAGTIPTQLGSLTSLRVMRIGDNWLSGSIPTSFGNLVNLGTLGLASCSLSGPIP 184 (1251)
Q Consensus 106 ~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 184 (1251)
.+.|.+|..+. ++++|++|+|++|.++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~--- 178 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG--- 178 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc---
Confidence 88888887655 788888888888888777764 345566666666666655555555555555555555555444
Q ss_pred CCcCcccccceeeeccccccCCCCcccCCCCCCceeeccccccCCCchhhhcccccCceeeccCccCCCCCCccccCCCc
Q 000859 185 PQFGQLSQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENNLNGSIPAALGRLQNLQLLNLGNNSLSGEIPSELGELSQ 264 (1251)
Q Consensus 185 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 264 (1251)
.+|..|+++++|++|++++|++++.+|..++++++|++|+|++|.+++.+|..++++++
T Consensus 179 ---------------------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 237 (968)
T PLN00113 179 ---------------------KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTS 237 (968)
T ss_pred ---------------------cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCC
Confidence 44555555555555555555555566666766777777777766665544443333333
Q ss_pred cceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccccCcccccccccccchhhhhcc
Q 000859 265 LGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNISGSIPRRICTNATSLEHLILA 344 (1251)
Q Consensus 265 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~L~ 344 (1251)
|++|++ ++|++++.+|..
T Consensus 238 L~~L~L------------------------~~n~l~~~~p~~-------------------------------------- 255 (968)
T PLN00113 238 LNHLDL------------------------VYNNLTGPIPSS-------------------------------------- 255 (968)
T ss_pred CCEEEC------------------------cCceeccccChh--------------------------------------
Confidence 333322 222222111111
Q ss_pred chhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeecccccccccccccccccccEEEecccccCCCC
Q 000859 345 EIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSNLQELALYHNNFQGSL 424 (1251)
Q Consensus 345 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 424 (1251)
++.+++|++|++++|
T Consensus 256 -----------l~~l~~L~~L~L~~n------------------------------------------------------ 270 (968)
T PLN00113 256 -----------LGNLKNLQYLFLYQN------------------------------------------------------ 270 (968)
T ss_pred -----------HhCCCCCCEEECcCC------------------------------------------------------
Confidence 111111222222211
Q ss_pred chhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccccccc
Q 000859 425 PREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCH 504 (1251)
Q Consensus 425 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 504 (1251)
.+++.+|..+.++++|++|++++|++.+.+|..+.+++
T Consensus 271 ------------------------------------------~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 308 (968)
T PLN00113 271 ------------------------------------------KLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQ 308 (968)
T ss_pred ------------------------------------------eeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCC
Confidence 11122333445566788999999999988999999999
Q ss_pred cCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCeeecccccccccccccccCccceeeeccc
Q 000859 505 QLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTN 584 (1251)
Q Consensus 505 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~ 584 (1251)
+|+.|++++|.+++..|..+..+++|+.|+|++|.+++.+|..+..+++|+.|++++|+++
T Consensus 309 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~------------------- 369 (968)
T PLN00113 309 NLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT------------------- 369 (968)
T ss_pred CCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE-------------------
Confidence 9999999999998888887877777777777777777666666666666666666655553
Q ss_pred CccccCCCCCCCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCc
Q 000859 585 NEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVP 664 (1251)
Q Consensus 585 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 664 (1251)
+.+|..++.+++|+.|++++|++.+.+|..++.+++|+.|++++|++++..|
T Consensus 370 ----~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p------------------------ 421 (968)
T PLN00113 370 ----GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELP------------------------ 421 (968)
T ss_pred ----eeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECC------------------------
Confidence 2344445555555555555555555555555555555555555555554444
Q ss_pred cccCCCcccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccc
Q 000859 665 SWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSK 744 (1251)
Q Consensus 665 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 744 (1251)
..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++.+.+|..+ ..++|+.|++++|++++.+|..+..+++
T Consensus 422 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~ 500 (968)
T PLN00113 422 SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSE 500 (968)
T ss_pred hhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhc
Confidence 444445555555555555555445445555555555555555555555544 2467777777777777777777777888
Q ss_pred cceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhccCCCcEeec
Q 000859 745 LYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEMSSLGKLNLS 824 (1251)
Q Consensus 745 L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 824 (1251)
|+.|+|++|++.+.+|..++.+++|+. |+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|+++
T Consensus 501 L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 579 (968)
T PLN00113 501 LMQLKLSENKLSGEIPDELSSCKKLVS-LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNIS 579 (968)
T ss_pred cCEEECcCCcceeeCChHHcCccCCCE-EECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEecc
Confidence 888888888887788888888888854 8888888888888889999999999999999999999999999999999999
Q ss_pred cccCcCccC--cccCCCCCccccCCccCCCCCC----CCCCCccccCCCccceeeeeeehhHHHHHHHHHHHHHHhhhhh
Q 000859 825 YNDLQGKLS--KQFSHWPAEAFEGNLHLCGSPL----DHCNGLVSNQHQSTISVSLVVAISVISTLSAIALLIAVVTLFV 898 (1251)
Q Consensus 825 ~N~l~~~~~--~~~~~~~~~~~~~n~~~c~~~~----~~c~~~~~~~~~~~~~~~~iv~i~~~~~~~~~~l~~~~~~~~~ 898 (1251)
+|++.|.+| ++|..+.+.+|.||+..||.+. ..|... .....+ +++++++++++++++++++ +++++
T Consensus 580 ~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 652 (968)
T PLN00113 580 HNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----RKTPSW-WFYITCTLGAFLVLALVAF-GFVFI 652 (968)
T ss_pred CCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-----ccccee-eeehhHHHHHHHHHHHHHH-HHHHH
Confidence 999999998 6888899999999999998653 234211 111112 2222223333333322222 22333
Q ss_pred hhhhhh-ccccccccccCCCCchHHHHHHHHHhhhcccCCHHHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEE
Q 000859 899 KRKREF-LRKSSQVNYTSSSSSSQAQRRLLFQAAAKRDFRWEDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVK 976 (1251)
Q Consensus 899 ~rk~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK 976 (1251)
+|+++. .++..... . .. + ...+.......+.+++. ...+...+.||+|+||.||+|.. .++..||||
T Consensus 653 ~~~~~~~~~~~~~~~---~-~~---~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK 721 (968)
T PLN00113 653 RGRNNLELKRVENED---G-TW---E-LQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVK 721 (968)
T ss_pred Hhhhccccccccccc---c-cc---c-ccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEE
Confidence 322211 11111000 0 00 0 00011111122333443 34577788999999999999965 578999999
Q ss_pred EeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHH
Q 000859 977 KISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLK 1056 (1251)
Q Consensus 977 ~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~ 1056 (1251)
++..... ....|++++++++|||||+++|+|.+. ...++||||+++|+|.++++. ++|.++.+
T Consensus 722 ~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~~lv~Ey~~~g~L~~~l~~----------l~~~~~~~ 784 (968)
T PLN00113 722 EINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSE--KGAYLIHEYIEGKNLSEVLRN----------LSWERRRK 784 (968)
T ss_pred EccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcC--CCCEEEEeCCCCCcHHHHHhc----------CCHHHHHH
Confidence 9864322 123568899999999999999998654 346999999999999999853 78999999
Q ss_pred HHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCC
Q 000859 1057 IAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKA 1136 (1251)
Q Consensus 1057 i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 1136 (1251)
++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+..... .....||+.|+|||++.+..+
T Consensus 785 i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~ 855 (968)
T PLN00113 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--------DTKCFISSAYVAPETRETKDI 855 (968)
T ss_pred HHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc--------CCCccccccccCcccccCCCC
Confidence 99999999999996656699999999999999999988876 665533211 111367899999999999999
Q ss_pred CCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHcccc
Q 000859 1137 TEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKT 1216 (1251)
Q Consensus 1137 ~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 1216 (1251)
+.++|||||||++|||+||+.||+..........+|...... ......+++....+..+.......++.+++.+||+.
T Consensus 856 ~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 933 (968)
T PLN00113 856 TEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS--DCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTAT 933 (968)
T ss_pred CcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC--ccchhheeCccccCCCCccHHHHHHHHHHHHhhCcC
Confidence 999999999999999999999997665555566666654322 222334444444333334445566789999999999
Q ss_pred CCCCCCCHHHHHHHHHhhcCCCcc
Q 000859 1217 SPQERPSSRQVCDLLLNVFNNRIV 1240 (1251)
Q Consensus 1217 dP~~RPs~~eil~~L~~~~~~~~~ 1240 (1251)
||++||||+||++.|+++.+....
T Consensus 934 ~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 934 DPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred CchhCcCHHHHHHHHHHhhccccc
Confidence 999999999999999999875443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-58 Score=612.91 Aligned_cols=500 Identities=40% Similarity=0.619 Sum_probs=375.6
Q ss_pred ccceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCcc-ccccceEEEEccCccccCcccccccccccchhhhh
Q 000859 264 QLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEF-GNMGQLVFLVLSNNNISGSIPRRICTNATSLEHLI 342 (1251)
Q Consensus 264 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~ 342 (1251)
+++.|+|++|.+++.++..|..+++|+.|+|++|++.+.+|..+ ..+++|++|+|++|++++.+|.
T Consensus 70 ~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~------------- 136 (968)
T PLN00113 70 RVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR------------- 136 (968)
T ss_pred cEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc-------------
Confidence 45555555555555555555555555555555555554444332 2444444444444444432221
Q ss_pred ccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeecccccccccccccccccccEEEecccccCC
Q 000859 343 LAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSNLQELALYHNNFQG 422 (1251)
Q Consensus 343 L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 422 (1251)
+.+++|++|+|++|.+.+.+|. .+.++++|++|++++|.+.+
T Consensus 137 --------------~~l~~L~~L~Ls~n~~~~~~p~------------------------~~~~l~~L~~L~L~~n~l~~ 178 (968)
T PLN00113 137 --------------GSIPNLETLDLSNNMLSGEIPN------------------------DIGSFSSLKVLDLGGNVLVG 178 (968)
T ss_pred --------------cccCCCCEEECcCCcccccCCh------------------------HHhcCCCCCEEECccCcccc
Confidence 1234455555555555544444 44445555555555555555
Q ss_pred CCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccccc
Q 000859 423 SLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLGN 502 (1251)
Q Consensus 423 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 502 (1251)
..|..++.+++|++|+|++|.+++.+|..++++++|++|++++|.+++.+|..++++++|++|++++|++.+.+|..+++
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC
Confidence 55555555555555555555555555555666666666666666666666666666666666666666666666666666
Q ss_pred cccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCeeecccccccccccccccCccceeeec
Q 000859 503 CHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDV 582 (1251)
Q Consensus 503 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l 582 (1251)
+++|+.|++++|++++..|..+..+++|++|+|++|.+.+.+|..+.++++|+.|++++|.+.
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~----------------- 321 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFT----------------- 321 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccC-----------------
Confidence 666666666666666666666666666666666666666666666667777777777666654
Q ss_pred ccCccccCCCCCCCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCC
Q 000859 583 TNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGA 662 (1251)
Q Consensus 583 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 662 (1251)
+.+|..++.+++|+.|++++|++.+.+|..++.+++|+.|++++|++++.+|..+..+.+|+.|++++|.+.+.
T Consensus 322 ------~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 395 (968)
T PLN00113 322 ------GKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE 395 (968)
T ss_pred ------CcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEeccc
Confidence 34566677778888888888888888888888899999999999999988999999999999999999999999
Q ss_pred CccccCCCcccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccc
Q 000859 663 VPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRL 742 (1251)
Q Consensus 663 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 742 (1251)
+|..++.+++|+.|++++|++++..|..+..++.|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..++ .
T Consensus 396 ~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~ 474 (968)
T PLN00113 396 IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-S 474 (968)
T ss_pred CCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988888764 5
Q ss_pred cccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhccCCCcEe
Q 000859 743 SKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEMSSLGKLN 822 (1251)
Q Consensus 743 ~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 822 (1251)
++|+.|++++|++++.+|..+..+++|+. |+|++|++++.+|++++.+++|++|+|++|+++|.+|..+..+++|+.|+
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQ-LKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCE-EECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 89999999999999999999999999965 99999999999999999999999999999999999999999999999999
Q ss_pred eccccCcCccCcccCCC
Q 000859 823 LSYNDLQGKLSKQFSHW 839 (1251)
Q Consensus 823 l~~N~l~~~~~~~~~~~ 839 (1251)
|++|+++|.+|..+.++
T Consensus 554 Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNV 570 (968)
T ss_pred CCCCcccccCChhHhcC
Confidence 99999999999655544
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-46 Score=423.11 Aligned_cols=292 Identities=45% Similarity=0.764 Sum_probs=243.4
Q ss_pred hcccCCHHHHHHhhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceece
Q 000859 932 AKRDFRWEDIMGATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGH 1011 (1251)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~ 1011 (1251)
....|++.++..+|++|+..+.||+|+||.||+|...+|+.||||++....... .++|..|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 466799999999999999999999999999999999989999999886554432 4569999999999999999999999
Q ss_pred eeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC
Q 000859 1012 CCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN 1091 (1251)
Q Consensus 1012 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 1091 (1251)
|.+.+. ..++|||||++|+|.++|+.... ..++|..|.+||.++|+||+|||+.+.++||||||||+|||+|++
T Consensus 140 C~e~~~-~~~LVYEym~nGsL~d~L~~~~~-----~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~ 213 (361)
T KOG1187|consen 140 CLEGGE-HRLLVYEYMPNGSLEDHLHGKKG-----EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED 213 (361)
T ss_pred EecCCc-eEEEEEEccCCCCHHHHhCCCCC-----CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC
Confidence 987654 46999999999999999988531 178999999999999999999999988899999999999999999
Q ss_pred CCeEEcccccccccccccCCCCccccee-ecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCcc-ccchhH
Q 000859 1092 MEAHLGDFGLAKALVEDYNSNTESNTWF-AGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATF-GVEMDM 1169 (1251)
Q Consensus 1092 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~-~~~~~~ 1169 (1251)
+.+||+|||+|+..... ....... .||.+|+|||+...+..++|+|||||||++.|++||+.|.+... ..+...
T Consensus 214 ~~aKlsDFGLa~~~~~~----~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l 289 (361)
T KOG1187|consen 214 FNAKLSDFGLAKLGPEG----DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSL 289 (361)
T ss_pred CCEEccCccCcccCCcc----ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccH
Confidence 99999999999654321 1111111 79999999999999999999999999999999999999987654 334457
Q ss_pred HHHHHHHHhccchhhhhhhcccCCC-CCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKP-LLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.+|...... .....+++|..+.. ..+. ......+..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 290 ~~w~~~~~~--~~~~~eiiD~~l~~~~~~~-~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 290 VEWAKPLLE--EGKLREIVDPRLKEGEYPD-EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHHH--CcchhheeCCCccCCCCCh-HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 777744443 23667777766552 2221 14666799999999999999999999999999666544
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-46 Score=395.08 Aligned_cols=254 Identities=31% Similarity=0.482 Sum_probs=214.6
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+++....||+|..|+||++++ .+++.+|+|++....++...+++.+|++++++++||+||++||.|..... ...++||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~mE 158 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISICME 158 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEeehh
Confidence 456677899999999999955 47889999999877788889999999999999999999999999987765 5799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++|+|.+++++ .+.+++....+||.+|++||.|||+ + +||||||||+|||+++.|.|||||||.++.
T Consensus 159 YMDgGSLd~~~k~-------~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 159 YMDGGSLDDILKR-------VGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred hcCCCCHHHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 9999999999987 3678999999999999999999996 6 999999999999999999999999999987
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
+... ....++||..|||||.+.+..|+.++||||||++++|+.+|+.||....+...+ |.+...
T Consensus 229 lvnS------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~---~~~Ll~------- 292 (364)
T KOG0581|consen 229 LVNS------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD---IFELLC------- 292 (364)
T ss_pred hhhh------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC---HHHHHH-------
Confidence 6533 334479999999999999999999999999999999999999999765222222 222221
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+++ ...|.+|.. .+++++..++..|+++||.+|||++|++++
T Consensus 293 -~Iv~-~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 293 -AIVD-EPPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -HHhc-CCCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1222 122333332 478889999999999999999999999864
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-46 Score=416.08 Aligned_cols=258 Identities=29% Similarity=0.485 Sum_probs=218.8
Q ss_pred CCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
.+...+.||+|.||+||.|.|+....||||.++... ...++|.+|+++|++++|++||+++|+|..++ ..+|||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--piyIVtE~ 282 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE--PIYIVTEY 282 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc--cChhHHHHHHHHHHhCcccCeEEEEEEEecCC--ceEEEEEe
Confidence 345566899999999999999977799999997543 34578999999999999999999999997654 57999999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
|+.|+|.+||+... +..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..|||+|||+|+...
T Consensus 283 m~~GsLl~yLr~~~-----~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 283 MPKGSLLDYLRTRE-----GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred cccCcHHHHhhhcC-----CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC
Confidence 99999999998732 67789999999999999999999999 99999999999999999999999999999554
Q ss_pred cccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
++.+... ....-+..|+|||.+....++.|||||||||++|||+| |+.||.++...+. ++..
T Consensus 355 d~~Y~~~---~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev-----~~~l--------- 417 (468)
T KOG0197|consen 355 DDEYTAS---EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV-----LELL--------- 417 (468)
T ss_pred CCceeec---CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH-----HHHH---------
Confidence 4333222 22344789999999999999999999999999999999 9999987744321 2111
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
+ ...++|.+..|+++++++|..||+.+|++||||+.+...++++....
T Consensus 418 ---e--~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 418 ---E--RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred ---h--ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 1 12356677779999999999999999999999999999999988654
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-45 Score=429.60 Aligned_cols=269 Identities=28% Similarity=0.449 Sum_probs=226.7
Q ss_pred hhcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
.+.+....+.||+|+||+||+|+.. +...||||.++.+++...+++|.+|++.++.++|||||+++|+|.+.++
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 4455667778999999999999653 3467999999988888899999999999999999999999999977655
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcc---c----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIK---M----RKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~---~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
.++|+|||+.|||.+||+.+..... . ...++..+.+.||.|||.||+||-++ .+||||+..+|+||.+
T Consensus 564 --~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 564 --LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred --eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 5899999999999999976432111 1 34489999999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhH
Q 000859 1091 NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDM 1169 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~ 1169 (1251)
+..|||+|||+++.+...++......+ .-+.+|||||.+..++|+.+||||||||++||++| |+.||.+..+.+.
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t--~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV-- 714 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNT--LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV-- 714 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCc--eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH--
Confidence 999999999999987665555444344 34789999999999999999999999999999999 9999987755332
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
.+.+.+ +..++.++.++.++++||..||+..|++||+++||-..|++.-...
T Consensus 715 --------------Ie~i~~---g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 715 --------------IECIRA---GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred --------------HHHHHc---CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 111111 1336788889999999999999999999999999999998876543
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-45 Score=409.76 Aligned_cols=260 Identities=37% Similarity=0.583 Sum_probs=213.3
Q ss_pred CCcCceecccCCceEEEEEecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 948 LSDEFIIGSGGSGTVYKAELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
+...+.+|+|+||+||+|.|+....||||++.... +....++|.+|+.+|++++|||||+++|+|.+... ..++||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy 121 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEY 121 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEe
Confidence 34445699999999999999854449999997554 22236799999999999999999999999965432 57899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eeecCCCCCCeeecCCC-CeEEcccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPK-ILHRDIKSSNILLDSNM-EAHLGDFGLAKA 1104 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~ 1104 (1251)
+++|+|.+++++. ..+.+++..+.++|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.
T Consensus 122 ~~~GsL~~~l~~~-----~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-----RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred CCCCcHHHHHhhc-----ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 9999999999874 157899999999999999999999999 7 99999999999999998 999999999987
Q ss_pred cccccCCCCcccceeecccceecccccc--cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY--SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
..... ...+...||+.|||||++. ...|+.|+|||||||++|||+||+.||.+..+...
T Consensus 194 ~~~~~----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~--------------- 254 (362)
T KOG0192|consen 194 KVISK----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV--------------- 254 (362)
T ss_pred ecccc----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH---------------
Confidence 54321 2233368999999999999 66999999999999999999999999987744111
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
.........++..+ ..+++.+..+|.+||+.||++||++.+++..|+.+....
T Consensus 255 -~~~v~~~~~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 255 -ASAVVVGGLRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred -HHHHHhcCCCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 11112222233333 337788999999999999999999999999999887633
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.5e-46 Score=394.86 Aligned_cols=475 Identities=29% Similarity=0.426 Sum_probs=388.6
Q ss_pred ccchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeecccccccccccccccccccEEE
Q 000859 335 ATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSNLQELA 414 (1251)
Q Consensus 335 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 414 (1251)
-..+..+.+++|.+.. +...+.++..|..|++++|++. ..|.+++++.+++.|+.+.|++. .+|+.+..+.+|+.|+
T Consensus 44 qv~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLD 120 (565)
T ss_pred hcchhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhh
Confidence 3568888999998874 4456778888899999999998 78888999999999999999988 6778888888999999
Q ss_pred ecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCccCC
Q 000859 415 LYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVG 494 (1251)
Q Consensus 415 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 494 (1251)
+++|.+. .+|..++.+..|+.|+..+|+++ ..|+.+.++.+|..+++.+|+++ ..|+..-+++.|+.|+...|-++
T Consensus 121 ~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~- 196 (565)
T KOG0472|consen 121 CSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE- 196 (565)
T ss_pred cccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-
Confidence 9999988 67788888889999999999998 78888888999999999999998 55555555889999999999888
Q ss_pred CcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCchhh-hhhcCCCeeeccccccccccccccc
Q 000859 495 QIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSL-INLRNLTRINFSKNRLNGRIATLCS 573 (1251)
Q Consensus 495 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~l~~N~l~~~~~~l~~ 573 (1251)
.+|..++.+.+|..|+|..|+|. ..| .|.++..|.+|+++.|+|+ .+|... .++.+|..||+..|+++..|..+|-
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~cl 273 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICL 273 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccCchHHHH
Confidence 68888999999999999999998 666 7889999999999999998 455554 4889999999999999999999998
Q ss_pred CccceeeecccCccccCCCCCCCCcccCceeecccCccccccCcccccc--cccceEEc--cCCccc---C---------
Q 000859 574 SHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKI--RELSLLDL--SGNSLT---G--------- 637 (1251)
Q Consensus 574 ~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L--s~N~l~---~--------- 637 (1251)
..++.+||+|+|.|+ .+|..++++ .|+.|.+.+|.+..+-.+.+..= .-|++|.= ..-+++ +
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~ 351 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLP 351 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCC
Confidence 889999999999987 678888888 88999999998753322211110 11222211 001110 0
Q ss_pred -CCCccccccCCccEEEcCCCccCCCCccccCCCcc---cccccccCccccCCCccccccccccce-eeccCcccccccC
Q 000859 638 -PIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQ---LGELKLSFNQFVGFLPRELFNCSKLLV-LSLDGNMLNGSLP 712 (1251)
Q Consensus 638 -~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~---L~~L~l~~N~l~~~~p~~~~~l~~L~~-L~L~~N~l~~~~p 712 (1251)
..-.....+.+.+.|++++-+++ .+|+.+..-.+ .+..+++.|++.+ +|..+..++.+.. +.+++|.+. -+|
T Consensus 352 ~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~e-lPk~L~~lkelvT~l~lsnn~is-fv~ 428 (565)
T KOG0472|consen 352 SESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLCE-LPKRLVELKELVTDLVLSNNKIS-FVP 428 (565)
T ss_pred CCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHhh-hhhhhHHHHHHHHHHHhhcCccc-cch
Confidence 11123446778899999999999 66776655444 8889999999997 7988888877654 567777776 899
Q ss_pred cccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCC-cCcc
Q 000859 713 NEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPS-MGTL 791 (1251)
Q Consensus 713 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~-~~~l 791 (1251)
..++.+++|..|+|++|.+- .+|..++.+..|+.|+++.|+|. .+|..+..++.++ ++-.++|++. .+|++ +.+|
T Consensus 429 ~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lE-tllas~nqi~-~vd~~~l~nm 504 (565)
T KOG0472|consen 429 LELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLE-TLLASNNQIG-SVDPSGLKNM 504 (565)
T ss_pred HHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHH-HHHhcccccc-ccChHHhhhh
Confidence 99999999999999999987 79999999999999999999998 8999999888885 4556779998 56665 9999
Q ss_pred ccccEEEccCCccccCCchhhhhccCCCcEeeccccCc
Q 000859 792 AKLEVLNLSHNQLVGELPSQLGEMSSLGKLNLSYNDLQ 829 (1251)
Q Consensus 792 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 829 (1251)
++|..|||.+|.|. .+|+.+++|++|++|+|++|||.
T Consensus 505 ~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 505 RNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99999999999998 89999999999999999999998
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-43 Score=375.00 Aligned_cols=254 Identities=27% Similarity=0.362 Sum_probs=204.8
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchh------hhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHL------LNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
...|...+.+|+|+||.|-+| ..++|+.||||++....... ......+|+++|++++|||||+++++|.. +
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~--~ 248 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV--P 248 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--C
Confidence 345677789999999999999 67789999999997543211 12335699999999999999999999854 5
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC---CCe
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN---MEA 1094 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~ 1094 (1251)
...|+||||++||+|.+++-. .+.+.++....+++|++.|+.|||+. ||+||||||+|||+..+ ..+
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~-------nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVA-------NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred CceEEEEEEecCccHHHHHHh-------ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEE
Confidence 567999999999999999976 35688888899999999999999999 99999999999999766 779
Q ss_pred EEcccccccccccccCCCCcccceeecccceecccccccCC---CCCccceeehhHHHHHHhhCCCCCCCccccchhHHH
Q 000859 1095 HLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK---ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1095 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1171 (1251)
||+|||+|+...+ .......+||+.|.|||++.... +..++|+||+||++|-+++|.+||.+..+...
T Consensus 319 KItDFGlAK~~g~-----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---- 389 (475)
T KOG0615|consen 319 KITDFGLAKVSGE-----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---- 389 (475)
T ss_pred Eecccchhhcccc-----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc----
Confidence 9999999987642 33344479999999999988654 33478999999999999999999986644321
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..+.+....+.-..+.+...+.+..++|.+|+..||++|||+.|+++.
T Consensus 390 -----------l~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 390 -----------LKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -----------HHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 112222222222234456677889999999999999999999999864
No 10
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.5e-46 Score=396.70 Aligned_cols=431 Identities=31% Similarity=0.430 Sum_probs=278.2
Q ss_pred CcCccCCCCCceEEccCCcccCCccccccccccccEEEeecccccccccccccccccccEEEecccccCCCCchhhhccc
Q 000859 353 PVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSNLQELALYHNNFQGSLPREIGMLV 432 (1251)
Q Consensus 353 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 432 (1251)
|..++.+.+|+.|++++|.+. .+|++++.+..++.++..+|++. ..|+.+.++.+|..|++.+|++....|..+. ++
T Consensus 107 p~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~ 183 (565)
T KOG0472|consen 107 PEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MK 183 (565)
T ss_pred cHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HH
Confidence 333444444444444444444 44444444444555555555544 2344444455555555555555533333332 55
Q ss_pred ccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCcccc-ccccCCeeec
Q 000859 433 KLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLG-NCHQLIILDL 511 (1251)
Q Consensus 433 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L 511 (1251)
.|++||..+|-++ .+|+.++.+.+|..|++..|+|. .+| +|.++..|++|+++.|+|+ .+|.... ++++|.+|||
T Consensus 184 ~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDL 259 (565)
T KOG0472|consen 184 RLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDL 259 (565)
T ss_pred HHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeec
Confidence 5555555555554 45555555555555555555555 445 4556666666666666665 3444443 6666666666
Q ss_pred CCCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCeeecccccccccccccccCcc---ceeeec--ccCc
Q 000859 512 ADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHS---FLSFDV--TNNE 586 (1251)
Q Consensus 512 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~---l~~l~l--~~n~ 586 (1251)
.+|+++ ..|+.+..+++|+.||+|+|.|+ .+|.+++++ .|+.|-+.||+++.+-..+.+... +.+|.- ....
T Consensus 260 RdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dg 336 (565)
T KOG0472|consen 260 RDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDG 336 (565)
T ss_pred cccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCC
Confidence 666666 56666666666666666666666 456666666 677777777776654333322221 112110 0001
Q ss_pred cccCCCCCCCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCC---ccEEEcCCCccCCCC
Q 000859 587 FDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKK---LSHIDLNNNLLSGAV 663 (1251)
Q Consensus 587 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~l~~N~l~~~~ 663 (1251)
++.. + -.+-..-++. .+.. .....+.+.+.|++++=+++ .+|.+.....+ .+..+++.|++. ++
T Consensus 337 lS~s--e----~~~e~~~t~~----~~~~-~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-el 403 (565)
T KOG0472|consen 337 LSQS--E----GGTETAMTLP----SESF-PDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-EL 403 (565)
T ss_pred CCCC--c----ccccccCCCC----CCcc-cchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hh
Confidence 1000 0 0000000000 0011 12345567888888888888 57776655554 788999999998 77
Q ss_pred ccccCCCccccc-ccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccc
Q 000859 664 PSWLGTLPQLGE-LKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRL 742 (1251)
Q Consensus 664 ~~~~~~l~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 742 (1251)
|..+..+..+.. +++++|.+ ++.|..+..+++|..|+|++|.+. .+|.+++.+..|+.|++|.|++. .+|.++-.+
T Consensus 404 Pk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~l 480 (565)
T KOG0472|consen 404 PKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYEL 480 (565)
T ss_pred hhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhH
Confidence 888877776655 55555554 578999999999999999999998 89999999999999999999998 799999888
Q ss_pred cccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhh
Q 000859 743 SKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLG 813 (1251)
Q Consensus 743 ~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 813 (1251)
..|+.+-.++|++..+.|..+..+.+|. +|||.+|.+. ++|+.+++|++|++|+|++|.+. .|....
T Consensus 481 q~lEtllas~nqi~~vd~~~l~nm~nL~-tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr~~i 547 (565)
T KOG0472|consen 481 QTLETLLASNNQIGSVDPSGLKNMRNLT-TLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPRHQI 547 (565)
T ss_pred HHHHHHHhccccccccChHHhhhhhhcc-eeccCCCchh-hCChhhccccceeEEEecCCccC--CCHHHH
Confidence 8888888888999988888899999995 5999999999 89999999999999999999998 455433
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.9e-43 Score=391.54 Aligned_cols=249 Identities=26% Similarity=0.397 Sum_probs=210.7
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.+|...+.||+|||+.||+++. .+|+.||+|++..+. .....+...+|++|.++++|||||+++++|.+ ....|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED--s~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED--SNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec--CCceEE
Confidence 5688999999999999999966 889999999997643 44456788999999999999999999999954 456799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|.|.|+.|+|.+++++ ++.+++.+++.+.+||+.|+.|||++ +|+|||+|..|++++++.+|||+|||+|
T Consensus 96 vLELC~~~sL~el~Kr-------rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLA 165 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKR-------RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLA 165 (592)
T ss_pred EEEecCCccHHHHHHh-------cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEeccccee
Confidence 9999999999999985 57899999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
..+..+ ...+...+||+.|.|||++....++..+||||+||++|-|+.|++||+...-.+.
T Consensus 166 t~le~~----~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket--------------- 226 (592)
T KOG0575|consen 166 TQLEYD----GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET--------------- 226 (592)
T ss_pred eeecCc----ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH---------------
Confidence 887533 2344457999999999999999999999999999999999999999975411111
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
........+..+...+.+..++|.++++.||.+|||+++|++.
T Consensus 227 -----y~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 227 -----YNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -----HHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000011222333456678899999999999999999999864
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-44 Score=405.01 Aligned_cols=274 Identities=26% Similarity=0.388 Sum_probs=229.6
Q ss_pred cCCHHHHHHhhcC---------CCcCceecccCCceEEEEEecC----CcEEEEEEeccCCchhhhHHHHHHHHHHHhcc
Q 000859 935 DFRWEDIMGATNN---------LSDEFIIGSGGSGTVYKAELAN----GATVAVKKISCKDDHLLNKSFTREVKTLGRIR 1001 (1251)
Q Consensus 935 ~~~~~~~~~~~~~---------~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 1001 (1251)
.++|||...+..+ ..+.++||.|.||.||+|+++. ...||||.++....+..+.+|..|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 4556655444433 3567789999999999997642 45799999998888889999999999999999
Q ss_pred CCCccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 000859 1002 HRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDI 1081 (1251)
Q Consensus 1002 h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 1081 (1251)
||||+++.|+.... ...+||+|||++|+|..||+.+ .+.+++.+...|.++||.||.||.+. ++||||+
T Consensus 689 HPNIIrLEGVVTks--~PvMIiTEyMENGsLDsFLR~~------DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDL 757 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKS--KPVMIITEYMENGSLDSFLRQN------DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDL 757 (996)
T ss_pred CCcEEEEEEEEecC--ceeEEEhhhhhCCcHHHHHhhc------CCceEeehHHHHHHHHHHHhHHHhhc---Cchhhhh
Confidence 99999999988654 4469999999999999999986 46799999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCC
Q 000859 1082 KSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTD 1160 (1251)
Q Consensus 1082 kp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~ 1160 (1251)
.++||||+.+..+|++|||++|.+.++. ........-.-+.+|.|||.+..+.++.+||||||||++||.++ |..||.
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW 836 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 836 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc
Confidence 9999999999999999999999775554 22222222334689999999999999999999999999999998 999998
Q ss_pred CccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCc
Q 000859 1161 ATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRI 1239 (1251)
Q Consensus 1161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~ 1239 (1251)
++.+.+. .+. +.+ ...+|.+..|+..+++||..||++|-.+||.|.||+..|.+++.+..
T Consensus 837 dmSNQdV----------------Ika-Ie~--gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 837 DMSNQDV----------------IKA-IEQ--GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred ccchHHH----------------HHH-HHh--ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 7754332 111 111 13567777899999999999999999999999999999999987654
No 13
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=370.14 Aligned_cols=205 Identities=31% Similarity=0.473 Sum_probs=179.4
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
..+|...+.||+|+||+||+|++ +++.+||||.+..+. .....+-...|+++++.++|||||++++++.. ++..|+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~--~~~i~l 86 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED--DDFIYL 86 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec--CCeEEE
Confidence 45678888899999999999954 468999999998765 55566778899999999999999999997643 557899
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC------CCeEE
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN------MEAHL 1096 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~------~~~kl 1096 (1251)
|||||+||||.+|++. ++.++++.++.++.|+|.|+++||++ +||||||||+|||++.. -.+||
T Consensus 87 VMEyC~gGDLs~yi~~-------~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKI 156 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRR-------RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKI 156 (429)
T ss_pred EEEeCCCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEe
Confidence 9999999999999998 45799999999999999999999999 99999999999999764 46899
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccc
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVE 1166 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~ 1166 (1251)
+|||+|+.+.+ .......+|++-|||||+++..+|+.|+|+||+|+++|||++|+.||+.....+
T Consensus 157 ADFGfAR~L~~-----~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e 221 (429)
T KOG0595|consen 157 ADFGFARFLQP-----GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE 221 (429)
T ss_pred cccchhhhCCc-----hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence 99999998743 223334789999999999999999999999999999999999999998664433
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-43 Score=358.43 Aligned_cols=260 Identities=24% Similarity=0.363 Sum_probs=210.3
Q ss_pred CCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|.+.++||.|.||+||++ +..+|..||.|.+.-.. +...+++...|+.+|++++|||||+++++-..+.....++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4677789999999999999 66789999999997443 555678899999999999999999999965555555578999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPK--ILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+++.|+|.++++.-. +.++.+++..+++++.|++.|+.++|.... . |+||||||.||+++.+|.||++|||++
T Consensus 100 E~c~~GDLsqmIk~~K---~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~-r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFK---KQKRLIPEKTVWKYFVQLCRALYHCHSKIP-RGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HhhcccCHHHHHHHHH---hccccCchHHHHHHHHHHHHHHHHHhcccc-ccceeeccCcchheEEcCCCceeeccchhH
Confidence 9999999999997532 336789999999999999999999999432 5 999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+.+... .......+|||.||+||.+.+..|+.+|||||+||++|||+.-++||.+. .+.+..+
T Consensus 176 r~l~s~----~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~-------- 238 (375)
T KOG0591|consen 176 RFLSSK----TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCK-------- 238 (375)
T ss_pred hHhcch----hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHH--------
Confidence 987432 33334579999999999999999999999999999999999999999865 1111111
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.+.... .+.. +.+..+.++.+++..|+..||+.||+.-.++..+.
T Consensus 239 ---KI~qgd-~~~~-p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 239 ---KIEQGD-YPPL-PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ---HHHcCC-CCCC-cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 111111 1111 23668889999999999999999999544444433
No 15
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=419.18 Aligned_cols=272 Identities=26% Similarity=0.438 Sum_probs=227.9
Q ss_pred cCCCcCceecccCCceEEEEEecC--Cc----EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN--GA----TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
......+.||+|+||.||+|.+.+ |. .||||.++...+.....+|.+|+.+|++++|||||+++|+|.+. ..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--GP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC--CC
Confidence 345566789999999999997653 33 49999998888888999999999999999999999999999874 44
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++++|||++|||..||++.+........++..+...+|.|||+|+.||+++ ++|||||.++|+|++....|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 6999999999999999998866555677899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|+|+.+....+...... ..-+.+|||||.+..+.++.|+|||||||++||++| |..||.+..+.+. ...
T Consensus 847 GlArDiy~~~yyr~~~~--a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-----~~~--- 916 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGE--AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-----LLD--- 916 (1025)
T ss_pred chhHhhhhchheeccCc--cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-----HHH---
Confidence 99996544333322222 234679999999999999999999999999999999 9999987644322 110
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCccccc
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIVDFD 1243 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~~~~ 1243 (1251)
+.. ...++.+..|+..++++|..||+.+|++||+|+.|++++.++.....-...
T Consensus 917 --------~~~---ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~ 970 (1025)
T KOG1095|consen 917 --------VLE---GGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIY 970 (1025)
T ss_pred --------HHh---CCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcc
Confidence 111 125566777899999999999999999999999999999998876555433
No 16
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5e-41 Score=343.34 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=205.7
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+.|+...++|+|+||+||+++. .+|+.||||++....+ +...+-..+|++++++++|||+|.++.+|.. ....++|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--krklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR--KRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--cceeEEE
Confidence 3577778999999999999965 4699999999976554 5666778899999999999999999999954 4557999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
+||++. ++.+-|.+.+ ..++.+.+.++.+|+++|+.|+|++ ++|||||||+||+++.+|.+|+||||+|+
T Consensus 80 FE~~dh-TvL~eLe~~p------~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYP------NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred eeecch-HHHHHHHhcc------CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhH
Confidence 999986 6666676653 5688999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.+.. .....+.++.|..|+|||.+.+ ..|+..+||||+||++.||++|.+-|.+... .+..-.+.........
T Consensus 150 ~L~~----pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD--iDQLy~I~ktLG~L~p 223 (396)
T KOG0593|consen 150 TLSA----PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD--IDQLYLIRKTLGNLIP 223 (396)
T ss_pred hhcC----CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch--HHHHHHHHHHHcccCH
Confidence 8753 2233344678999999999887 6899999999999999999999999987643 2222222221111111
Q ss_pred hhhhhh------cccCCCCCCchHH-------HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 AREELL------DDQMKPLLPGEEC-------AAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~~------~~~~~~~~~~~~~-------~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
....++ ....-|..+.++. ...-+.++++.|++.||++|++-+|++.
T Consensus 224 rhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 224 RHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111 1111122111111 3345789999999999999999999874
No 17
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=369.54 Aligned_cols=250 Identities=29% Similarity=0.495 Sum_probs=208.2
Q ss_pred ccCCHHHHHHhhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceee
Q 000859 934 RDFRWEDIMGATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCC 1013 (1251)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 1013 (1251)
-.+.|+++ ...+-||.|+-|.||+|+.+ ++.||||+++. .-+.+++.|++++||||+.|.|+|.
T Consensus 119 WeiPFe~I-------sELeWlGSGaQGAVF~Grl~-netVAVKKV~e--------lkETdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 119 WEIPFEEI-------SELEWLGSGAQGAVFLGRLH-NETVAVKKVRE--------LKETDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred ccCCHHHh-------hhhhhhccCcccceeeeecc-CceehhHHHhh--------hhhhhHHHHHhccCcceeeEeeeec
Confidence 34555553 44567999999999999997 79999999852 2246899999999999999999996
Q ss_pred ecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC
Q 000859 1014 NKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME 1093 (1251)
Q Consensus 1014 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 1093 (1251)
. ...++||||||..|-|++.|+. +..++....+.+..+||.||.|||.+ +|||||+|.-||||+.+..
T Consensus 183 q--sPcyCIiMEfCa~GqL~~VLka-------~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~ 250 (904)
T KOG4721|consen 183 Q--SPCYCIIMEFCAQGQLYEVLKA-------GRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDV 250 (904)
T ss_pred C--CceeEEeeeccccccHHHHHhc-------cCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccce
Confidence 4 3457999999999999999987 56788999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHH
Q 000859 1094 AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWV 1173 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1173 (1251)
|||+|||-++...+. ..+..++||..|||||+++..+.++|+||||||||||||+||..||.+.....+-+
T Consensus 251 VKIsDFGTS~e~~~~-----STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw---- 321 (904)
T KOG4721|consen 251 VKISDFGTSKELSDK-----STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW---- 321 (904)
T ss_pred EEeccccchHhhhhh-----hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE----
Confidence 999999998765332 22234799999999999999999999999999999999999999997653221100
Q ss_pred HHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1174 EMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
+.. .-.-.++.++.+++-+.-+++.||+..|..||||++|+..|..+
T Consensus 322 -------GVG-------sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 322 -------GVG-------SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred -------ecc-------CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 000 01123566777888999999999999999999999999998654
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-41 Score=369.16 Aligned_cols=257 Identities=28% Similarity=0.365 Sum_probs=209.2
Q ss_pred HHhhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCC
Q 000859 942 MGATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 942 ~~~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 1017 (1251)
.....+|...+.||+|+|++|++| +..++++||||++.++- .+...+.+.+|-.+|.++ .||.|++++-.|.+ +
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD--~ 146 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD--E 146 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec--c
Confidence 344567888889999999999999 56689999999986543 333446678899999999 89999999877754 5
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...|+|+||+++|+|.+++++ -+.+++..++.+|.+|+.|++|||++ |||||||||+|||+|.||++||+
T Consensus 147 ~sLYFvLe~A~nGdll~~i~K-------~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikIT 216 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDLLDLIKK-------YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKIT 216 (604)
T ss_pred cceEEEEEecCCCcHHHHHHH-------hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEe
Confidence 568999999999999999998 46899999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCC---------CCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchh
Q 000859 1098 DFGLAKALVEDYNS---------NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMD 1168 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~ 1168 (1251)
|||.|+.+.+.... ...+...++||..|.+||++.....+.++|+|+|||++|+|+.|++||.+......-
T Consensus 217 DFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF 296 (604)
T KOG0592|consen 217 DFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF 296 (604)
T ss_pred eccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH
Confidence 99999987653322 111224589999999999999999999999999999999999999999876332110
Q ss_pred HHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1169 MVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+ ...++- ..++..++.+.+|+++.+..||.+|+|.++|.++
T Consensus 297 -qk-------------I~~l~y------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 297 -QK-------------IQALDY------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -HH-------------HHHhcc------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 00 001111 1222234668899999999999999999877654
No 19
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-41 Score=355.53 Aligned_cols=243 Identities=25% Similarity=0.386 Sum_probs=198.8
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
..+|+..++||+|+||+||.++ .++++.+|+|+++++. ...+.+...+|..|+.+++||.||+++-.| +.+...|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF--Qt~~kLy 101 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF--QTEEKLY 101 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--ccCCeEE
Confidence 3468999999999999999995 4578999999997654 223457788999999999999999998666 4456689
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|+||+.||.|...|.+ .+.++++.++-++..|+.||.|||++ +|||||+||+|||+|++|.++|+|||+
T Consensus 102 lVld~~~GGeLf~hL~~-------eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL 171 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQR-------EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGL 171 (357)
T ss_pred EEEeccCCccHHHHHHh-------cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecccc
Confidence 99999999999999987 46799999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
++....+ ......++||+.|||||++.+..|+.++|+||+||++|||++|.+||.+... ..+.+
T Consensus 172 ~k~~~~~----~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-----~~~~~------- 235 (357)
T KOG0598|consen 172 CKEDLKD----GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-----KKMYD------- 235 (357)
T ss_pred chhcccC----CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-----HHHHH-------
Confidence 9854322 2222337999999999999999999999999999999999999999986522 11111
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP 1222 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1222 (1251)
.+.... ....+...+.+..+++.+.++.||++|.
T Consensus 236 ----~I~~~k---~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 236 ----KILKGK---LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ----HHhcCc---CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 111111 1112222455688999999999999995
No 20
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=353.72 Aligned_cols=276 Identities=26% Similarity=0.386 Sum_probs=208.4
Q ss_pred CCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc--cCCCccceeceeeecC--CCceeEE
Q 000859 948 LSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI--RHRHLVKLMGHCCNKG--AGSNLLI 1023 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~~--~~~~~lv 1023 (1251)
....+++|+|.||.||+|.+. ++.||||++. ....+.|..|-+|++.. +|+||++|+++-.... ...+++|
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 344557999999999999986 6999999995 33457888888887765 8999999998543222 3357999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhc------CCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHD------CVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
+||.+.|+|.+||+.+ .++|.+..+|+..+++||+|||+. +.|+|+|||||.+||||.+|+++.|+
T Consensus 287 t~fh~kGsL~dyL~~n--------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN--------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeeccCCcHHHHHHhc--------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 9999999999999864 689999999999999999999986 34789999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccCC------CCCccceeehhHHHHHHhhCCCCCCC--ccccchhH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK------ATEKCDVYSMGIVLMELVSGKMPTDA--TFGVEMDM 1169 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSlGv~l~el~tg~~p~~~--~~~~~~~~ 1169 (1251)
|||+|..+..+.. .......+||.+|||||++.+.- .-.+.||||+|.|+|||+++..-++. ..+.....
T Consensus 359 DFGLAl~~~p~~~--~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 359 DFGLALRLEPGKP--QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred ccceeEEecCCCC--CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 9999998864332 22333479999999999986542 22468999999999999998766532 22222222
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCch---HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCc
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGE---ECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRI 1239 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~ 1239 (1251)
...+..++.. +.....++.++.+|.++.. ......+.+.+..||..||+.|.|+.=+.+.+.++.....
T Consensus 437 e~evG~hPt~-e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 437 EAEVGNHPTL-EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred hHHhcCCCCH-HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 2222222211 2223334444555555421 1245678999999999999999999999999888775443
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-40 Score=357.15 Aligned_cols=267 Identities=28% Similarity=0.380 Sum_probs=211.5
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
...|+..++||+|.||.||+| +..+|+.||+|+++.+. .+.......+||.||++++||||+++.+...+......|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 345777789999999999999 56789999999998665 3334456679999999999999999999988876677899
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+|||+. ||..++... .-.+++.++..++.|++.||+|+|++ +|+|||||.+|||+|.+|.+||+|||+|
T Consensus 196 VFeYMdh-DL~GLl~~p------~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP------GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred EEecccc-hhhhhhcCC------CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 9999987 888888764 45799999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+.+.... ....+..+-|..|+|||.+.+. .|+.++|+||.|||+.||++|++.|.+.... +..+......+
T Consensus 266 r~y~~~~---~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-----eQl~kIfklcG 337 (560)
T KOG0600|consen 266 RFYTPSG---SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-----EQLHKIFKLCG 337 (560)
T ss_pred eeccCCC---CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-----HHHHHHHHHhC
Confidence 9775432 2224456789999999998865 6999999999999999999999999876332 22333333334
Q ss_pred hhhhhhhc-------ccCCCCCCchH-------HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 SAREELLD-------DQMKPLLPGEE-------CAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 ~~~~~~~~-------~~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
...+..+. ..+++..+... ..+....+++..++..||++|.||.++++
T Consensus 338 SP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 338 SPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 43333222 11111111111 13456788999999999999999999874
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=362.53 Aligned_cols=269 Identities=23% Similarity=0.302 Sum_probs=210.1
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.++|...++||.|.||.||+| ...+|..||||+++.+-...+.-.-.||++.++++. |||||++..++.+... ..++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEee
Confidence 456788889999999999999 456799999999987665544455679999999998 9999999998876644 7899
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|||||+. +|++.++++ .+.+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|
T Consensus 88 VfE~Md~-NLYqLmK~R------~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLA 157 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR------NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLA 157 (538)
T ss_pred eHHhhhh-hHHHHHhhc------CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccc
Confidence 9999975 999999876 57899999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceeccccc-ccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc-
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYA-YSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS- 1180 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 1180 (1251)
|.+.. ..+.+.++.|..|+|||++ +.+.|+.+.||||+||+++|+.+=++-|.+....+. +.+.++......
T Consensus 158 Rev~S-----kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~VLGtP~~ 231 (538)
T KOG0661|consen 158 REVRS-----KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEVLGTPDK 231 (538)
T ss_pred ccccc-----CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHHhCCCcc
Confidence 98643 3344557889999999976 466799999999999999999999999987644221 111111110000
Q ss_pred chhhh-hhhcccCCCCCCc---------hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1181 GSARE-ELLDDQMKPLLPG---------EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1181 ~~~~~-~~~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..+.+ .-+...+.-.+|. ...+..+..++|.+|+++||.+||||+|.+++
T Consensus 232 ~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 232 DSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00000 1111111111111 11266788999999999999999999999875
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4e-40 Score=367.23 Aligned_cols=267 Identities=31% Similarity=0.468 Sum_probs=212.4
Q ss_pred HHHHHhhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 939 EDIMGATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 939 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
+++.+..+++.....||+|.||+||+|+|. -.||||++.... ..+..+.|..|+.++++-+|.||+-|+|||....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~- 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP- 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc-
Confidence 445556666778889999999999999997 479999997554 3446789999999999999999999999996543
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
.+||+.||+|.+|+.+++-. +..+.+.+.+.||.|||+||.|||.+ +|||||+|..||++.++++|||+
T Consensus 462 --~AIiTqwCeGsSLY~hlHv~------etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIg 530 (678)
T KOG0193|consen 462 --LAIITQWCEGSSLYTHLHVQ------ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIG 530 (678)
T ss_pred --eeeeehhccCchhhhhccch------hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEe
Confidence 38999999999999999875 46789999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceeccccccc---CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS---LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1174 (1251)
|||++..-..- ..........|..-|||||+++. .+|++.+||||||+|+|||+||..||... ..+- .. |
T Consensus 531 DFGLatvk~~w--~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dq-Ii-f-- 603 (678)
T KOG0193|consen 531 DFGLATVKTRW--SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQ-II-F-- 603 (678)
T ss_pred cccceeeeeee--ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-Chhh-eE-E--
Confidence 99999653221 11112222457788999999874 46899999999999999999999999732 1110 00 0
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
+.+ +.+. +.........++.++.+|+..||..++++||.+.+|+..|+.+..
T Consensus 604 ----mVG--rG~l----~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 604 ----MVG--RGYL----MPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ----Eec--cccc----CccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 000 0000 111122334477789999999999999999999999999998887
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-40 Score=357.31 Aligned_cols=264 Identities=27% Similarity=0.441 Sum_probs=206.1
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.++...+.||+|+||+||++... +|+..|||.+....... .+.+.+|+.+|++++|||||+++|.........+++.|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 34666778999999999999654 58999999997664333 56789999999999999999999964433333578999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCeEEccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEAHLGDFGLAK 1103 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~ 1103 (1251)
||+++|+|.+++.+.. +.+++..++++..||++|++|||++ |||||||||+|||++. ++.+||+|||.++
T Consensus 96 Ey~~~GsL~~~~~~~g------~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~ 166 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYG------GKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAK 166 (313)
T ss_pred eccCCCcHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccc
Confidence 9999999999998753 2799999999999999999999999 9999999999999999 7999999999998
Q ss_pred ccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.... ............||+.|||||++..+ ....++||||+||++.||+||+.||..... ...+.
T Consensus 167 ~~~~-~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~----~~~~~--------- 232 (313)
T KOG0198|consen 167 KLES-KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE----EAEAL--------- 232 (313)
T ss_pred cccc-ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc----hHHHH---------
Confidence 7643 11222223346899999999999853 344599999999999999999999875300 00000
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
..+......| +.+...+++..+++.+|++.||++||||+++++.-....+.
T Consensus 233 --~~ig~~~~~P--~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 233 --LLIGREDSLP--EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred --HHHhccCCCC--CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 0000111112 22333667789999999999999999999999877654433
No 25
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-40 Score=361.12 Aligned_cols=268 Identities=25% Similarity=0.407 Sum_probs=221.8
Q ss_pred HHHhhcCCCcCceecccCCceEEEEEecC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 941 IMGATNNLSDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 941 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
++-...+....++||.|.||.||.|.|+. .-.||||.++.+. ...++|.+|+.+|+.++|||+|+++|+|..+.+
T Consensus 262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP-- 337 (1157)
T KOG4278|consen 262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP-- 337 (1157)
T ss_pred hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC--
Confidence 33345567778899999999999998864 4679999996544 457899999999999999999999999977654
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
+|||+|||.+|+|.+||++.. +..++.-..++||.||+.||+||..+ .+||||+.++|+||.++..|||+||
T Consensus 338 FYIiTEfM~yGNLLdYLRecn-----r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADF 409 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECN-----RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADF 409 (1157)
T ss_pred eEEEEecccCccHHHHHHHhc-----hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeecc
Confidence 599999999999999999875 45677788899999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|+++.+..+.+.. +....-++.|.|||.+....++.|+|||+|||++||+.| |-.||.+. ++....+
T Consensus 410 GLsRlMtgDTYTA---HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSqVY~---- 477 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTA---HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYG---- 477 (1157)
T ss_pred chhhhhcCCceec---ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHHHHH----
Confidence 9999876543322 222334689999999999999999999999999999999 99999765 2222111
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCcccc
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIVDF 1242 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~~~ 1242 (1251)
++... .+...++.|++.++++|+.||++.|.+||+++|+-+.++.++...-+..
T Consensus 478 --------LLEkg--yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSisd 531 (1157)
T KOG4278|consen 478 --------LLEKG--YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSISD 531 (1157)
T ss_pred --------HHhcc--ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccccccH
Confidence 11111 1234567789999999999999999999999999999999997665543
No 26
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=343.15 Aligned_cols=269 Identities=26% Similarity=0.436 Sum_probs=216.2
Q ss_pred hhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc--cCCCccceeceeeecCC--Cc
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI--RHRHLVKLMGHCCNKGA--GS 1019 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~~~--~~ 1019 (1251)
...+....+.||+|.||+||+|+|+ |+.||||++...+ ++.+.+|.+|++.+ +|+||+.|++.-..+.. .+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEecccc----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 3456677789999999999999998 8999999996543 36778899998886 99999999985443322 24
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeeecCCCCCCeeecCCCCe
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHD-----CVPKILHRDIKSSNILLDSNMEA 1094 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~Nill~~~~~~ 1094 (1251)
.|+|++|.+.|+|+|||.+ ..++.+.+.+++..+|.||+|||.. +.|.|+|||||..||||..++++
T Consensus 284 LwLvTdYHe~GSL~DyL~r--------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR--------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred EEEeeecccCCcHHHHHhh--------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 6999999999999999986 4689999999999999999999965 56889999999999999999999
Q ss_pred EEcccccccccccccCCCCcccceeecccceecccccccCC------CCCccceeehhHHHHHHhhC----------CCC
Q 000859 1095 HLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK------ATEKCDVYSMGIVLMELVSG----------KMP 1158 (1251)
Q Consensus 1095 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSlGv~l~el~tg----------~~p 1158 (1251)
-|+|+|+|.....+...-.......+||.+|||||++...- .-..+||||||.|+||+..+ ++|
T Consensus 356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 99999999887666555555566689999999999976432 23469999999999999753 577
Q ss_pred CCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCc---hHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1159 TDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPG---EECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
|.+..+.+....+ .++-+..++.+|..|. ..++...+.++|+.||..+|..|-|+-.|.+.|.++.
T Consensus 436 yyd~Vp~DPs~ee-----------MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 436 YYDVVPSDPSFEE-----------MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred cccCCCCCCCHHH-----------HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 7666554443322 2233444555555543 3446677899999999999999999999999999987
Q ss_pred C
Q 000859 1236 N 1236 (1251)
Q Consensus 1236 ~ 1236 (1251)
+
T Consensus 505 ~ 505 (513)
T KOG2052|consen 505 N 505 (513)
T ss_pred c
Confidence 6
No 27
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-40 Score=364.26 Aligned_cols=364 Identities=25% Similarity=0.248 Sum_probs=288.9
Q ss_pred cccccccCCCCCCCCCCcCcccccceeeeccccccCCCCcccCCCCCCceeeccccccCCCchhhhcccccCceeeccCc
Q 000859 170 GTLGLASCSLSGPIPPQFGQLSQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENNLNGSIPAALGRLQNLQLLNLGNN 249 (1251)
Q Consensus 170 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 249 (1251)
++|++++|.++..-+..|.++++|++++|.+|.++ .||...+-...|+.|+|.+|.|+..-.+.+..++.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 45667777776666666777777777777777776 56666555666777777777777777788888888888888888
Q ss_pred cCCCCCCccccCCCccceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccccCcccc
Q 000859 250 SLSGEIPSELGELSQLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNISGSIPR 329 (1251)
Q Consensus 250 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~i~~ 329 (1251)
.|+.+.-..|..-.++++|+|++|+|+.+....|.++.+|..|.|+.|+++...+..|.++++|+.|+|..|+|. .+..
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-ive~ 238 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IVEG 238 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee-eehh
Confidence 888555556777778999999999998888888888889999999999998777788888999999999999886 5556
Q ss_pred cccccccchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeeccccccccccccccccc
Q 000859 330 RICTNATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSN 409 (1251)
Q Consensus 330 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 409 (1251)
..|.++++|+.|.|..|+++..-...|..|.++++|+|+.|++...-..++++++.|+.|+||+|.|..+.++.....++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 67888888999999999888777888999999999999999998777788999999999999999999888888888899
Q ss_pred ccEEEecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCC---cccccCCCcEEe
Q 000859 410 LQELALYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPT---SIGRLKDLNFLH 486 (1251)
Q Consensus 410 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~---~~~~l~~L~~L~ 486 (1251)
|++|+|++|+|+...+..|..+..|++|.|++|.++..--..|..+++|++|||++|.++..+.+ .|..+++|+.|.
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 99999999999988888899999999999999999866566778888888888888887754433 355666666666
Q ss_pred ccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhcc
Q 000859 487 LRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLY 536 (1251)
Q Consensus 487 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 536 (1251)
|.+|+|..+.-.+|.++..|+.|||.+|.|..+.|++|..+ .|++|.+.
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 66666665555566666666666666666666666666666 66666554
No 28
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=359.68 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=212.3
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
...|....+||+|+.|.||.| +..+++.||||++.... ...++-+..|+.+|+..+|+|||.++..|... +..|+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~-Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~--deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK-QPKKELLLNEILVMRDLHHPNIVNFLDSYLVG--DELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc-CCchhhhHHHHHHHHhccchHHHHHHHHhccc--ceeEEE
Confidence 345777789999999999999 56678999999996543 33457788999999999999999999977665 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
||||+||+|.+.+... .+++.++..|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++.
T Consensus 349 MEym~ggsLTDvVt~~--------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT--------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EeecCCCchhhhhhcc--------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 9999999999988763 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
.+..... .....+||+.|||||++....|++++||||+|++++||+-|++||-...+. .
T Consensus 418 qi~~~~~----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl----r------------- 476 (550)
T KOG0578|consen 418 QISEEQS----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----R------------- 476 (550)
T ss_pred ccccccC----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH----H-------------
Confidence 7654322 233468999999999999999999999999999999999999999643221 1
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..+.+...-.+.+..++..+..+.+++.+|++.||++||+++|+++.
T Consensus 477 AlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 477 ALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11223344456666777788899999999999999999999999864
No 29
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-39 Score=356.21 Aligned_cols=266 Identities=25% Similarity=0.369 Sum_probs=215.9
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
......+++||+|-||.|..+....+..||||+++..+......+|.+|+++|.+++|||||+++|+|..+++ .++|+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP--icmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP--LCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc--hHHHH
Confidence 4455677899999999999999887899999999988877778999999999999999999999999987654 58999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|||++|+|.+|+.++.. .....+...+|+.||+.||+||.+. .+||||+.++|+|++.++++||+|||+++.
T Consensus 615 EYmEnGDLnqFl~ahea-----pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHEL-----PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHhcCcHHHHHHhccC-----cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccc
Confidence 99999999999987631 2234455678999999999999999 999999999999999999999999999997
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh--CCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS--GKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+....+.. .....+-+.+|||||.+.-++++.+||||+|||++||+++ ...||....... .++...++.
T Consensus 687 lysg~yy~--vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~-----vven~~~~~-- 757 (807)
T KOG1094|consen 687 LYSGDYYR--VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ-----VVENAGEFF-- 757 (807)
T ss_pred cccCCcee--eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH-----HHHhhhhhc--
Confidence 65443322 2223466899999999999999999999999999999886 788987653321 122222111
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.++...-.++.+..++.+++++|.+||..|-++||+++++...|++.
T Consensus 758 -----~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 758 -----RDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -----CCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11111122334556888999999999999999999999999888764
No 30
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=366.68 Aligned_cols=264 Identities=25% Similarity=0.404 Sum_probs=212.4
Q ss_pred hhcCCCcCceecccCCceEEEEEecC--C---cEEEEEEecc--CCchhhhHHHHHHHHHHHhccCCCccceeceeeecC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELAN--G---ATVAVKKISC--KDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~--~---~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 1016 (1251)
...+....++||+|+||.||+|+++. + ..||||.... .......++|.+|+++|+.++|||||++||++..+.
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34445556899999999999996543 2 2389999874 245667789999999999999999999999987765
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEE
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHL 1096 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 1096 (1251)
| .++|||+|+||+|.+||++.+ +.++..+..+++.+.|.||+|||++ +++||||.++|+|++.++.+||
T Consensus 235 P--l~ivmEl~~gGsL~~~L~k~~------~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 235 P--LMLVMELCNGGSLDDYLKKNK------KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred c--cEEEEEecCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 5 599999999999999999853 4699999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
+|||+++.-. .+ .. ......-+.+|+|||.+....|++++|||||||++||+++ |..||.+....+.
T Consensus 304 SDFGLs~~~~-~~-~~--~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v-------- 371 (474)
T KOG0194|consen 304 SDFGLSRAGS-QY-VM--KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV-------- 371 (474)
T ss_pred CccccccCCc-ce-ee--ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH--------
Confidence 9999987532 11 11 1111134689999999999999999999999999999999 8999987744311
Q ss_pred HHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCcc
Q 000859 1176 HMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIV 1240 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~ 1240 (1251)
...+.....+ .+.+...+.++..++.+||..||++||+|.++.+.++.+......
T Consensus 372 --------~~kI~~~~~r--~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 372 --------KAKIVKNGYR--MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred --------HHHHHhcCcc--CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 1111111111 122234567789999999999999999999999999999876554
No 31
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-38 Score=320.12 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=203.3
Q ss_pred cCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.+|...+++|+|.||.||+| +..+|+.||||+++.... +.......+|++.++.++|+||+.++++|... ....+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~--~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK--SNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC--CceEEE
Confidence 35777889999999999999 567899999999975542 22345678999999999999999999998554 446899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
+|||+. +|...++.. ...++..++..++.++++|++|||++ .|+|||+||.|+|++++|.+||+|||+|+
T Consensus 80 fEfm~t-dLe~vIkd~------~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr 149 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKDK------NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLAR 149 (318)
T ss_pred EEeccc-cHHHHhccc------ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchh
Confidence 999975 899999875 46789999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.+....... +..+-|..|+|||.+.+. .|+..+||||.||++.||+-|.+-|.+... .+.... .....+.
T Consensus 150 ~f~~p~~~~----~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD--idQL~~---If~~LGT 220 (318)
T KOG0659|consen 150 FFGSPNRIQ----THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD--IDQLSK---IFRALGT 220 (318)
T ss_pred ccCCCCccc----ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch--HHHHHH---HHHHcCC
Confidence 886543322 223679999999988865 599999999999999999999887766532 111111 1111111
Q ss_pred hhh-hh---------hcccCCCCCCc---hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1183 ARE-EL---------LDDQMKPLLPG---EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1183 ~~~-~~---------~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... +| ..-...|..+. -..++.+..+++..++..||.+|+|++|++++
T Consensus 221 P~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 221 PTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111 11 01011111111 12245667899999999999999999999864
No 32
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-39 Score=344.02 Aligned_cols=266 Identities=23% Similarity=0.333 Sum_probs=210.3
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|+...+||.|..++||+|+ ...++.||||++..+......+.+.+|+..|+.++||||++++..|.. +...|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv--~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV--DSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe--cceeEEe
Confidence 4568888999999999999994 557899999999877666667889999999999999999999877755 4557999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|.||.+|++.+.++..- ...+.+..+..|.+++++||.|||++ |.||||||+.|||++++|.|||+|||.+.
T Consensus 103 mpfMa~GS~ldIik~~~-----~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa 174 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYY-----PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSA 174 (516)
T ss_pred ehhhcCCcHHHHHHHHc-----cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeee
Confidence 99999999999998743 45689999999999999999999999 99999999999999999999999999887
Q ss_pred ccccccCCCCcccceeecccceecccccc--cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAY--SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
.+.........+-..++||+.|||||++. ...|+.|+||||||++..|+.+|..||....+.++-+.......+..
T Consensus 175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~-- 252 (516)
T KOG0582|consen 175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTL-- 252 (516)
T ss_pred eecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCc--
Confidence 66543311111114578999999999955 34699999999999999999999999987755443222211100000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..... ...........+.+++..|+++||.+|||++++++.
T Consensus 253 --~t~~~------~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 253 --LTSGL------DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred --ccccC------ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 00000 011122244578999999999999999999999763
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.9e-39 Score=353.76 Aligned_cols=248 Identities=27% Similarity=0.362 Sum_probs=206.8
Q ss_pred cCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|.+.+.||+|.||.|||| +..+.+.||+|.+.+.. .+.+.+.+.+|++|+++++|||||.++++|.. ....|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt--~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET--SAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc--cceEEEE
Confidence 46777788999999999999 45578999999986543 44566778999999999999999999998854 4457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
+||+.| +|..++.. .+.++++.++.++.|++.|+.|||+. +|.|||+||+||+++..|.+|+||||+|+
T Consensus 80 te~a~g-~L~~il~~-------d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar 148 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQ-------DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLAR 148 (808)
T ss_pred ehhhhh-hHHHHHHh-------ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhh
Confidence 999976 99999987 56899999999999999999999999 99999999999999999999999999998
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
.+.. .....+...||+-|||||.+.+.+|+..+|+||+||++||+++|++||-... ....
T Consensus 149 ~m~~----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----i~~L----------- 208 (808)
T KOG0597|consen 149 AMST----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----ITQL----------- 208 (808)
T ss_pred hccc----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----HHHH-----------
Confidence 7643 3444555789999999999999999999999999999999999999996431 1111
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+.+.. .....+......+..++...+.+||.+|.|..+++..
T Consensus 209 v~~I~~----d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 209 VKSILK----DPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHhc----CCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 111111 1222333566788999999999999999999998753
No 34
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.4e-38 Score=369.91 Aligned_cols=269 Identities=27% Similarity=0.414 Sum_probs=209.2
Q ss_pred hcCCCcCceecccCCceEEEEEe------cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL------ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 1017 (1251)
.++|++.++||+|+||.||+|.. .+++.||||++.........+.+.+|+++++++ +||||++++|+|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-N 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-C
Confidence 45688899999999999999963 235689999997655555567889999999999 899999999987643 3
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCc------------------------------------------------------
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNI------------------------------------------------------ 1043 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------------------------ 1043 (1251)
...++||||+++|+|.+++.......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 34689999999999999997542100
Q ss_pred -ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecc
Q 000859 1044 -KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGS 1122 (1251)
Q Consensus 1044 -~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt 1122 (1251)
.....+++.++.+++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++........ .......++
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~ 239 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKGSARLP 239 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch--hcccCCCCC
Confidence 0023588899999999999999999999 9999999999999999999999999999765322111 111223457
Q ss_pred cceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHH
Q 000859 1123 YGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEEC 1201 (1251)
Q Consensus 1123 ~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1201 (1251)
..|+|||++.+..++.++|||||||++|||++ |..||.+....+. ..... .+. ... ..+..
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----~~~~~-----------~~~-~~~--~~~~~ 301 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----FCQRL-----------KDG-TRM--RAPEN 301 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----HHHHH-----------hcC-CCC--CCCCC
Confidence 88999999999999999999999999999997 9999976432211 00000 000 001 11223
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1202 AAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1202 ~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.+.++.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 302 ~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 302 ATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 456789999999999999999999999999998764
No 35
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=362.64 Aligned_cols=367 Identities=25% Similarity=0.234 Sum_probs=212.0
Q ss_pred cccEEEccCCCCCCCcCccccccCcccEEecccccccCCCCcccCCCccccEEEeccCCCCCCCCCcccccccccccccc
Q 000859 96 SLIHLDLSSNSLTGPIPTALSNLSSLESLLLFSNQLAGTIPTQLGSLTSLRVMRIGDNWLSGSIPTSFGNLVNLGTLGLA 175 (1251)
Q Consensus 96 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 175 (1251)
.-+.||+|+|++...-+.+|.++++|+++++..|.++ .||...+...+|+.|+|.+|.++..-.+++..++.|+.|||+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3456777777777766777777777777777777776 666666666667777777777766556666666677777777
Q ss_pred cCCCCCCCCCCcCcccccceeeeccccccCCCCcccCCCCCCceeeccccccCCCchhhhcccccCceeeccCccCCCCC
Q 000859 176 SCSLSGPIPPQFGQLSQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENNLNGSIPAALGRLQNLQLLNLGNNSLSGEI 255 (1251)
Q Consensus 176 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 255 (1251)
.|.|+..--++|..-.++++|+|++|+|+..--..|.++.+|..|.|++|+++...+..|.+|+.|+.|+|..|.|.-.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 77766555556655556666666666666555555665555555555555555555555555555555555555554222
Q ss_pred CccccCCCccceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccccCcccccccccc
Q 000859 256 PSELGELSQLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNISGSIPRRICTNA 335 (1251)
Q Consensus 256 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l 335 (1251)
--.|.++++|+.|.|..|.|...-.+.|..+.++++|+|+.|++...-..++.+ +
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfg-------------------------L 292 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFG-------------------------L 292 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccc-------------------------c
Confidence 234444555555555555444444444444444444444444444333333333 3
Q ss_pred cchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeecccccccccccccccccccEEEe
Q 000859 336 TSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSNLQELAL 415 (1251)
Q Consensus 336 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 415 (1251)
++|++|++++|.|....+.....+++|++|+||+|+|+...+.. |..+..|++|+|
T Consensus 293 t~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~s------------------------f~~L~~Le~LnL 348 (873)
T KOG4194|consen 293 TSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGS------------------------FRVLSQLEELNL 348 (873)
T ss_pred chhhhhccchhhhheeecchhhhcccceeEeccccccccCChhH------------------------HHHHHHhhhhcc
Confidence 33333333333333344455555666666666666666444444 444445555555
Q ss_pred cccccCCCCchhhhcccccchhhcccCccccccc---CCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCcc
Q 000859 416 YHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIP---SEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNEL 492 (1251)
Q Consensus 416 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 492 (1251)
++|.++..-...|..+++|++|||++|.|+..+- ..|.++++|+.|++.+|++..+.-.+|.++..|+.|+|.+|-|
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 5555543333445555555555555555553332 3355566666666666666644445666666667777777766
Q ss_pred CCCcCccccccccCCeeecCC
Q 000859 493 VGQIPASLGNCHQLIILDLAD 513 (1251)
Q Consensus 493 ~~~~p~~l~~l~~L~~L~Ls~ 513 (1251)
..+.|++|..+ .|+.|-+..
T Consensus 429 aSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 429 ASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred eeecccccccc-hhhhhhhcc
Confidence 66666666666 666665554
No 36
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=356.45 Aligned_cols=256 Identities=24% Similarity=0.382 Sum_probs=218.7
Q ss_pred CCCcCceecccCCceEEEEEecC---Cc--EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELAN---GA--TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.....++||+|-||.||+|.+.+ |+ .||||+-+.+......+.|.+|+.+|+.++|||||+++|+|.+. ..|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~---P~W 466 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ---PMW 466 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc---cee
Confidence 34455689999999999996543 32 58999988777777789999999999999999999999999654 359
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|||.++.|.|..||+.. ...++......++.||+.||+|||+. ++|||||.++||||.+..-||++|||+
T Consensus 467 ivmEL~~~GELr~yLq~n------k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQN------KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred EEEecccchhHHHHHHhc------cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccch
Confidence 999999999999999876 46788999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
++.+..+.+.... ...-+..|||||.+.-++++.+||||.|||.+||++. |..||.+..+.+.-.
T Consensus 538 SR~~ed~~yYkaS---~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~----------- 603 (974)
T KOG4257|consen 538 SRYLEDDAYYKAS---RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG----------- 603 (974)
T ss_pred hhhccccchhhcc---ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-----------
Confidence 9987655444332 2244789999999999999999999999999999998 999998765433210
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
.-.-..++|.++.|++.++.+|.+||..||.+||.+.++...|+++++
T Consensus 604 --------~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 --------HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred --------EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 011224677888899999999999999999999999999999999987
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=349.82 Aligned_cols=251 Identities=28% Similarity=0.408 Sum_probs=210.8
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
...|+..+.||+|.||.||+| +.++++.||+|++.-...+.+.+++.+|+.++..++++||.++||.|... ...+++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g--~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG--TKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec--ccHHHH
Confidence 345777789999999999999 66789999999998888777889999999999999999999999987653 456999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+.||++.+.++.. ..+.+.++.-+.+++..|+.|||.+ +.+|||||+.||++..+|.||++|||.+.
T Consensus 90 Mey~~gGsv~~lL~~~-------~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSG-------NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAG 159 (467)
T ss_pred HHHhcCcchhhhhccC-------CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceee
Confidence 9999999999999863 3447777788999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
.+..+ ......++||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+....+...
T Consensus 160 ql~~~----~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv---------------- 219 (467)
T KOG0201|consen 160 QLTNT----VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV---------------- 219 (467)
T ss_pred eeech----hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE----------------
Confidence 66433 2222457999999999999999999999999999999999999999987644211
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...+.....|.+.. .+.+.+.+++..|+++||+.||||+++++.
T Consensus 220 -lflIpk~~PP~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 220 -LFLIPKSAPPRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred -EEeccCCCCCcccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 11222223333333 467779999999999999999999999864
No 38
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-38 Score=356.30 Aligned_cols=248 Identities=24% Similarity=0.357 Sum_probs=208.4
Q ss_pred CCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
-|...+.||.|+.|.|..| +..+|+.+|||++.+.. .......+.+|+.||+-+.||||+++|+++.. ....|+|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~--~~~lylv 90 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN--KQHLYLV 90 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc--CceEEEE
Confidence 4667778999999999999 45689999999997552 33345678899999999999999999998854 4557999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
.||+++|-|.+|+.+ ++.+++.++.++++||+.|+.|+|.. +|+|||+||+|+|+|..+.+||+|||+|.
T Consensus 91 lEyv~gGELFdylv~-------kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAs 160 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVR-------KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMAS 160 (786)
T ss_pred EEecCCchhHHHHHh-------hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceee
Confidence 999999999999987 47899999999999999999999999 99999999999999999999999999996
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCC-CccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKAT-EKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.-. ....-...+|+++|.|||++++.+|+ .++||||.|||+|.++||+.||++. ....
T Consensus 161 Le~-----~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~----------- 219 (786)
T KOG0588|consen 161 LEV-----PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRV----------- 219 (786)
T ss_pred ccc-----CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHH-----------
Confidence 532 22233346899999999999999985 6899999999999999999999844 1111
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
++....++.+.++...+.+.++++.+|+..||++|.|++||.++-
T Consensus 220 ----LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 220 ----LLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred ----HHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 111222244556667788899999999999999999999998864
No 39
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.1e-38 Score=346.71 Aligned_cols=251 Identities=24% Similarity=0.298 Sum_probs=202.1
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
..++|+...+||+|+||.||.|+ ..+|..+|+|++++.. .....+.+..|-.+|...++|.||++|-.| ++....
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF--QD~~~L 216 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF--QDKEYL 216 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--cCCCee
Confidence 56789999999999999999995 4579999999997654 223456778899999999999999998766 446678
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
|+||||++|||+..+|.+ .+.++++.++.++.+++.||+.+|+. |||||||||+|+|||..|++||+|||
T Consensus 217 YLiMEylPGGD~mTLL~~-------~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFG 286 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMR-------KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFG 286 (550)
T ss_pred EEEEEecCCccHHHHHHh-------cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecccc
Confidence 999999999999999987 46899999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccC-------------------CCCc-----cc-------------------ceeecccceecccccccCCCC
Q 000859 1101 LAKALVEDYN-------------------SNTE-----SN-------------------TWFAGSYGYIAPEYAYSLKAT 1137 (1251)
Q Consensus 1101 ~a~~~~~~~~-------------------~~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~ 1137 (1251)
++..+..... .... .. ...+|||.|||||++.+..|+
T Consensus 287 Ls~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~ 366 (550)
T KOG0605|consen 287 LSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYG 366 (550)
T ss_pred ccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCC
Confidence 9865432000 0000 00 015899999999999999999
Q ss_pred CccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccC
Q 000859 1138 EKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTS 1217 (1251)
Q Consensus 1138 ~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 1217 (1251)
..+|+||+|||+|||+.|.+||.+..+.+....- ..|+..+ .+|......++..++|.+|+. |
T Consensus 367 ~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI---------~nwr~~l-------~fP~~~~~s~eA~DLI~rll~-d 429 (550)
T KOG0605|consen 367 KECDWWSLGCIMYEMLVGYPPFCSETPQETYRKI---------VNWRETL-------KFPEEVDLSDEAKDLITRLLC-D 429 (550)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---------HHHhhhc-------cCCCcCcccHHHHHHHHHHhc-C
Confidence 9999999999999999999999887665432110 1111111 123333445778899999999 9
Q ss_pred CCCCCC
Q 000859 1218 PQERPS 1223 (1251)
Q Consensus 1218 P~~RPs 1223 (1251)
|++|--
T Consensus 430 ~~~RLG 435 (550)
T KOG0605|consen 430 PENRLG 435 (550)
T ss_pred HHHhcC
Confidence 999976
No 40
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=356.30 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=203.0
Q ss_pred hhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC----chhhhHHHHHHHHHHHhcc-CCCccceeceeeecCC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD----DHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~ 1017 (1251)
....|...+.||+|+||+|+.| ...+++.||||++..+. .....+.+.+|+.++++++ ||||++++.++...
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~-- 92 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP-- 92 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC--
Confidence 4567888999999999999999 45678999999775531 1133456778999999998 99999999988654
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-CCeEE
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-MEAHL 1096 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl 1096 (1251)
...++||||+.+|+|.+++.+ .+.+.+.++++++.|++.|++|+|++ +|+||||||+||+++.+ +.+||
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~-------~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl 162 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVN-------KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKL 162 (370)
T ss_pred CeEEEEEEecCCccHHHHHHH-------cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEE
Confidence 448999999999999999987 46788899999999999999999999 99999999999999999 99999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccCC-CC-CccceeehhHHHHHHhhCCCCCCCccccchhHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK-AT-EKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1174 (1251)
+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++.........
T Consensus 163 ~DFG~s~~~~----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k---- 234 (370)
T KOG0583|consen 163 SDFGLSAISP----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK---- 234 (370)
T ss_pred eccccccccC----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----
Confidence 9999997652 1222333468999999999999877 75 789999999999999999999987422111000
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHH-HHHHHHHHHHccccCCCCCCCHHHHH
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECA-AYQVLEIALQCTKTSPQERPSSRQVC 1228 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~eil 1228 (1251)
.....+..+... +.++..++.+|+..||.+|+|+.+|+
T Consensus 235 ----------------i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 235 ----------------IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ----------------HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 111122222223 67789999999999999999999998
No 41
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-38 Score=321.43 Aligned_cols=237 Identities=22% Similarity=0.338 Sum_probs=198.4
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.+|+..+.||.|+||+|..++. .+|..+|+|++.... .....+....|..+++.+.||.++++++.|.+ ....++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d--~~~lym 121 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD--NSNLYM 121 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc--CCeEEE
Confidence 4588888999999999999954 568999999997554 33345667789999999999999999987744 556799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||++||.|..++++ .+++++..++-+|.||+.|++|||+. +|++||+||+|||+|++|.+||+|||+|
T Consensus 122 vmeyv~GGElFS~Lrk-------~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFA 191 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRK-------SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFA 191 (355)
T ss_pred EEeccCCccHHHHHHh-------cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccce
Confidence 9999999999999998 46799999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+.+.. ..-..+||+.|+|||++....|..++|.|||||++|||+.|.+||.+..+..+
T Consensus 192 K~v~~-------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i--------------- 249 (355)
T KOG0616|consen 192 KRVSG-------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI--------------- 249 (355)
T ss_pred EEecC-------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH---------------
Confidence 87532 12237899999999999999999999999999999999999999986644211
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCC
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQER 1221 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1221 (1251)
.+.++. ..+..+.....++.+++...++.|-.+|
T Consensus 250 -Y~KI~~----~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 250 -YEKILE----GKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -HHHHHh----CcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 111111 2233344456678899999999999999
No 42
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-40 Score=381.49 Aligned_cols=480 Identities=30% Similarity=0.369 Sum_probs=396.3
Q ss_pred ccCccccCcccccccccccchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeeccccc
Q 000859 318 LSNNNISGSIPRRICTNATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLV 397 (1251)
Q Consensus 318 Ls~N~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 397 (1251)
.++..+. .||..++..-. +.+|++..|-+....-+.....-+|+.|||++|++. ..|..+..+.+|+.|+++.|.|.
T Consensus 5 ~s~~~l~-~ip~~i~~~~~-~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~ 81 (1081)
T KOG0618|consen 5 ASDEQLE-LIPEQILNNEA-LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR 81 (1081)
T ss_pred cccccCc-ccchhhccHHH-HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh
Confidence 3333333 44444443333 555555555544322223344555999999999998 89999999999999999999998
Q ss_pred ccccccccccccccEEEecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCccc
Q 000859 398 GSISPFVANLSNLQELALYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIG 477 (1251)
Q Consensus 398 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 477 (1251)
..|....++.+|++|.|.+|+++ ..|..+..+.+|++|+++.|++. .+|..+..++.+.++..++|..... ++
T Consensus 82 -~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg 154 (1081)
T KOG0618|consen 82 -SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LG 154 (1081)
T ss_pred -hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----hc
Confidence 45678889999999999999998 88999999999999999999998 8899999999999999999933212 23
Q ss_pred ccCCCcEEeccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCee
Q 000859 478 RLKDLNFLHLRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRI 557 (1251)
Q Consensus 478 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 557 (1251)
... ++.+++..|.+.+.++..+..++. .|||.+|.+. -..+..+.+|+.|+...|++.... ...++|+.|
T Consensus 155 ~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L 224 (1081)
T KOG0618|consen 155 QTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPSLTAL 224 (1081)
T ss_pred ccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcchhee
Confidence 332 888999999999999988888877 8999999987 235778899999999999998432 245789999
Q ss_pred ecccccccccccccccCccceeeecccCccccCCCCCCCCcccCceeecccCccccccCcccccccccceEEccCCcccC
Q 000859 558 NFSKNRLNGRIATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTG 637 (1251)
Q Consensus 558 ~l~~N~l~~~~~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 637 (1251)
+.++|.+.. ...-+....++++++++|+++ .+|+|++.+++|+.+...+|+++ .+|..+...++|+.|++..|.++
T Consensus 225 ~a~~n~l~~-~~~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~- 300 (1081)
T KOG0618|consen 225 YADHNPLTT-LDVHPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE- 300 (1081)
T ss_pred eeccCccee-eccccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-
Confidence 999999983 233345667899999999998 67799999999999999999996 78889999999999999999998
Q ss_pred CCCccccccCCccEEEcCCCccCCCCccccCCCcc-cccccccCccccCCCcc-ccccccccceeeccCcccccccCccc
Q 000859 638 PIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQ-LGELKLSFNQFVGFLPR-ELFNCSKLLVLSLDGNMLNGSLPNEV 715 (1251)
Q Consensus 638 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~ 715 (1251)
-+|+.....+.|++|+|..|.|...++..+..+.. |+.|+.+.|++.. .|. .=...+.|+.|++.+|.|+...-..+
T Consensus 301 yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~-lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l 379 (1081)
T KOG0618|consen 301 YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLST-LPSYEENNHAALQELYLANNHLTDSCFPVL 379 (1081)
T ss_pred hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccc-cccccchhhHHHHHHHHhcCcccccchhhh
Confidence 68888888999999999999999665555555554 8999999999886 452 22346789999999999998887889
Q ss_pred CCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCcccccc
Q 000859 716 GNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLE 795 (1251)
Q Consensus 716 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~ 795 (1251)
.+...|++|+|++|+|.......+.++..|++|+||+|+|+ .+|.++..+..|+ +|..-+|++. .+| ++..+++|+
T Consensus 380 ~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~-tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 380 VNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH-TLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred ccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH-HHhhcCCcee-ech-hhhhcCcce
Confidence 99999999999999998544456789999999999999998 6899999999996 5999999999 788 789999999
Q ss_pred EEEccCCcccc-CCchhhhhccCCCcEeecccc
Q 000859 796 VLNLSHNQLVG-ELPSQLGEMSSLGKLNLSYND 827 (1251)
Q Consensus 796 ~L~l~~N~l~~-~~p~~l~~l~~L~~L~l~~N~ 827 (1251)
++|+|.|+|+- .+|..+.. ++|+.|||++|.
T Consensus 456 ~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 456 VLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNT 487 (1081)
T ss_pred EEecccchhhhhhhhhhCCC-cccceeeccCCc
Confidence 99999999985 45554443 899999999998
No 43
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-38 Score=357.69 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=216.0
Q ss_pred CCcCceecccCCceEEEEEec-CC----cEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NG----ATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
....++||+|+||+||+|.|- .| -+||||++.........+++.+|+-+|.+++|||+++++|+|.... ..+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HHH
Confidence 445678999999999999663 33 4799999988877778899999999999999999999999997654 569
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|++||+.|+|.+|++.+ +..+.....+.+..|||+||.|||++ ++|||||.++||||.+...+||.|||+|
T Consensus 775 vtq~mP~G~LlDyvr~h------r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREH------RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred HHHhcccchHHHHHHHh------hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchh
Confidence 99999999999999986 46778889999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+....+...... ....-.+.|||-|.++.+.|+.++|||||||++||++| |..||++....++..
T Consensus 846 ~ll~~d~~ey~~--~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d------------ 911 (1177)
T KOG1025|consen 846 KLLAPDEKEYSA--PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD------------ 911 (1177)
T ss_pred hccCcccccccc--cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH------------
Confidence 887654332221 12234688999999999999999999999999999999 999998774443311
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
.+.. ..+++.+..++.+++.+|.+||..|+..||+|+++...+.++-+
T Consensus 912 -----lle~--geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 912 -----LLEK--GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred -----HHhc--cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 1111 12366777788899999999999999999999999999988764
No 44
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-37 Score=344.19 Aligned_cols=249 Identities=22% Similarity=0.304 Sum_probs=200.7
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeee--cCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCN--KGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~~~lv~E~~ 1027 (1251)
..||+|++|.||+|.+ +|+.||||++..... ....+.+.+|++++++++|||||+++|++.+ ......++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999988 589999999965432 2234678899999999999999999999876 4445678999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++++. +.+++....+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++....
T Consensus 105 ~~g~L~~~l~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 105 TRGYLREVLDKE-------KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175 (283)
T ss_pred CCCcHHHHHhhC-------CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence 999999999763 46889999999999999999999732 788999999999999999999999999876432
Q ss_pred ccCCCCcccceeecccceeccccccc--CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYS--LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.. ....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+ ....
T Consensus 176 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~-----~~~~---------- 233 (283)
T PHA02988 176 PP-------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE-----IYDL---------- 233 (283)
T ss_pred cc-------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH-----HHHH----------
Confidence 11 12367899999999876 679999999999999999999999997653211 1111
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
......+... +..++.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 234 -i~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 234 -IINKNNSLKL--PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred -HHhcCCCCCC--CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1011111111 2235667999999999999999999999999998875
No 45
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=330.39 Aligned_cols=266 Identities=24% Similarity=0.321 Sum_probs=199.6
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCC---cee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG---SNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---~~~ 1021 (1251)
-.|...+++|.|+||.||+|... +++.||||++..+... -.+|+++|+.++|||||++.-+|....+. ...
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 34667789999999999999654 5789999998654432 24799999999999999999888766554 446
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-CCeEEcccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-MEAHLGDFG 1100 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG 1100 (1251)
+|||||+. +|+++++... .....++.-.++-+.+||.+|++|||+. +|+||||||.|+|+|.+ |.+||||||
T Consensus 99 lVleymP~-tL~~~~r~~~---~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYT---RANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred HHHHhchH-HHHHHHHHHh---hcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCC
Confidence 89999986 9999998421 1235677778888999999999999998 99999999999999976 999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
.|+.+.... +...+..|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+... ...+...++.....
T Consensus 172 SAK~L~~~e-----pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 172 SAKVLVKGE-----PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTP 245 (364)
T ss_pred cceeeccCC-----CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCC
Confidence 999875432 23446779999999988865 699999999999999999999999987533 22333333322221
Q ss_pred cchhhhhhhcc-------cCCCCCC---chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSAREELLDD-------QMKPLLP---GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~~~~~~~~-------~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..+....+-.. ..++..- .....+++..+++.++++.+|.+|.++.|++.
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111111 0110000 11225577899999999999999999999874
No 46
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.5e-39 Score=357.15 Aligned_cols=366 Identities=28% Similarity=0.437 Sum_probs=331.2
Q ss_pred CCCccceEeccCCccc-CCCCCcccccCCCcEEeccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhh
Q 000859 454 NCSSLKWIDFFGNSFT-GEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQ 532 (1251)
Q Consensus 454 ~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 532 (1251)
-++-.+-+|+++|.|+ +..|.....++++++|.|...++. .+|+.++.|.+|+.|.+++|++. .+-+.+..|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3556677899999998 578999999999999999999998 78999999999999999999998 56677889999999
Q ss_pred hhccCCcccc-CCchhhhhhcCCCeeecccccccccccccccCccceeeecccCccccCCCCCC-CCcccCceeecccCc
Q 000859 533 LMLYNNSLEG-NLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTNNEFDHEIPPQL-GNSPSLERLRLGNNK 610 (1251)
Q Consensus 533 L~L~~N~l~~-~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~n~l~~~~p~~l-~~l~~L~~L~L~~N~ 610 (1251)
+.+.+|++.. -+|..+..+..|+.||||+|+++..|..+-..+++..|++|+|+|. .||..+ -++..|-.|+||+|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 9999999853 4677888999999999999999999999999999999999999997 566554 589999999999999
Q ss_pred cccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccC-CCCccccCCCcccccccccCccccCCCcc
Q 000859 611 FIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLS-GAVPSWLGTLPQLGELKLSFNQFVGFLPR 689 (1251)
Q Consensus 611 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 689 (1251)
+. .+|..+.++..|++|+||+|.+....-.++..+++|++|.+++.+-+ .-+|..+..|.+|+.+|||.|.+.- .|.
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~-vPe 239 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI-VPE 239 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCc-chH
Confidence 98 57778899999999999999998666677888999999999986644 5689999999999999999999984 799
Q ss_pred ccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCccccc-ccchhhhchhh
Q 000859 690 ELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNG-VIPLEIGQLQN 768 (1251)
Q Consensus 690 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~ 768 (1251)
++.++.+|+.|+|++|+|+ .+....+...+|++|++|.|+++ .+|+++++|++|+.|++.+|+|+- -+|..||+|.+
T Consensus 240 cly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~ 317 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQ 317 (1255)
T ss_pred HHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhh
Confidence 9999999999999999999 77777888899999999999999 899999999999999999999962 38999999999
Q ss_pred HHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhccCCCcEeeccccCc
Q 000859 769 LQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEMSSLGKLNLSYNDLQ 829 (1251)
Q Consensus 769 l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 829 (1251)
|+ ++..++|++. -+|+.+..+..|+.|.|++|+|. .+|+.+.-++.|+.||+..||=-
T Consensus 318 Le-vf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 318 LE-VFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hH-HHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 95 5899999998 89999999999999999999998 89999999999999999999854
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=326.21 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=205.4
Q ss_pred CCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|++.+.||+|.||+|-+| ....|+.||||.+++.. ++...-.+.+|++||..++||||+.+|.+|.. ....++|
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN--kdKIviv 131 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN--KDKIVIV 131 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC--CceEEEE
Confidence 4556668999999999999 55789999999997654 44455567899999999999999999999854 4557999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||..+|.|++|+.+ ++.+++.+++.+++||+.|+.|+|.+ ++||||+|.+|||+|+++.+||+|||++-
T Consensus 132 MEYaS~GeLYDYiSe-------r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSN 201 (668)
T KOG0611|consen 132 MEYASGGELYDYISE-------RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSN 201 (668)
T ss_pred EEecCCccHHHHHHH-------hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhh
Confidence 999999999999987 57899999999999999999999999 99999999999999999999999999986
Q ss_pred ccccccCCCCcccceeecccceecccccccCCC-CCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKA-TEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.+. ....-+.++|++-|.+||++.+.+| +..+|.||+||++|-+..|..||++... ...+.....
T Consensus 202 ly~-----~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lvrQIs~---- 267 (668)
T KOG0611|consen 202 LYA-----DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLVRQISR---- 267 (668)
T ss_pred hhc-----cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHHHHhhc----
Confidence 653 3334455899999999999999988 4689999999999999999999997622 222221110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
..+..|. .+.+..-+|++|+..+|++|.|+++|....+--
T Consensus 268 ------GaYrEP~------~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 268 ------GAYREPE------TPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ------ccccCCC------CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 0011111 223355799999999999999999999988643
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-37 Score=309.28 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=207.3
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.++|+..+.||+|.||.||.|+ .+++-.||+|++.+.. ......++.+|++|-..++||||+++||+|.+. ...|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--KRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc--ceeE
Confidence 3458899999999999999995 4567889999996543 222446788999999999999999999999654 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+++||.++|.++..|++++ ...+++.....+..|+|.|+.|+|.+ +|+||||||+|+|++..+..||+|||.
T Consensus 99 LilEya~~gel~k~L~~~~-----~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGw 170 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGR-----MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGW 170 (281)
T ss_pred EEEEecCCchHHHHHHhcc-----cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCc
Confidence 9999999999999999654 56788889999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+..- . .......+||..|.|||...+..++..+|+|++|++.||++.|.+||......+. +
T Consensus 171 sV~~-----p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et-Y------------ 231 (281)
T KOG0580|consen 171 SVHA-----P-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET-Y------------ 231 (281)
T ss_pred eeec-----C-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH-H------------
Confidence 8542 1 2233447999999999999999999999999999999999999999976532111 0
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.++.. -....+...+....++|.+|+..+|.+|.+..|+++.-+
T Consensus 232 ---krI~k----~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 232 ---KRIRK----VDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred ---HHHHH----ccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 11111 111122445667889999999999999999999988654
No 49
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.1e-37 Score=317.85 Aligned_cols=266 Identities=20% Similarity=0.296 Sum_probs=206.9
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchh-hhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHL-LNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.++|+..+.|++|.||.||+| +.++++.||+|+++-..... -.-...+|+.++.+++|||||.+-.+.....-+..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 345778889999999999999 56688999999997544221 1124579999999999999999999888777777899
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|||||+. ||...++.. ...+...++..+..|+++|++|||.. .|+|||+||+|+|+++.|.+||+|||+|
T Consensus 155 VMe~~Eh-DLksl~d~m------~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETM------KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred eHHHHHh-hHHHHHHhc------cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchh
Confidence 9999987 899999875 36789999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+.+..+ ....+..+-|..|+|||.+.+. .|+++.|+||+|||+.|++++++-|.+... .+....+-. ..+
T Consensus 225 R~ygsp----~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE--~dQl~~If~---llG 295 (419)
T KOG0663|consen 225 REYGSP----LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE--IDQLDKIFK---LLG 295 (419)
T ss_pred hhhcCC----cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch--HHHHHHHHH---HhC
Confidence 988644 3344556789999999998865 599999999999999999999999987633 222221111 111
Q ss_pred hhhhhhhcc------------------cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDD------------------QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...+.++.. .+++.++... ....-.+++...+..||.+|.||+|.++.
T Consensus 296 tPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 296 TPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CCccccCCCccccchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhcc
Confidence 111111110 0111121111 33567789999999999999999998753
No 50
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2e-36 Score=346.44 Aligned_cols=269 Identities=24% Similarity=0.380 Sum_probs=203.4
Q ss_pred cCCCcCceecccCCceEEEEEecC-----------------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN-----------------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKL 1008 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 1008 (1251)
.+|...+.||+|+||.||+|.+.+ +..||+|++.........+.+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 468888899999999999996532 336999999765555556789999999999999999999
Q ss_pred eceeeecCCCceeEEEeecCCCChHHhhhcCCCC------------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 000859 1009 MGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVN------------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKI 1076 (1251)
Q Consensus 1009 ~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~------------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 1076 (1251)
+|++... ...++||||+++|+|.+++...... ......+++..+.+++.||+.|++|||+. +|
T Consensus 85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 85 LGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 9988654 3469999999999999998654211 11124578899999999999999999999 99
Q ss_pred eecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh--
Q 000859 1077 LHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-- 1154 (1251)
Q Consensus 1077 vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-- 1154 (1251)
+||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY--RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCcee--EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 99999999999999999999999999765322111 11122345789999999988899999999999999999987
Q ss_pred CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1155 GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1155 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
+..||......+ .......... ..........+..++..+.+++.+||+.||++|||+++|.+.|++
T Consensus 238 ~~~p~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 238 KEQPYGELTDEQ--VIENAGEFFR----------DQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCCcCCHHH--HHHHHHHHhh----------hccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 567776543221 1111111000 000000000112245678999999999999999999999988863
No 51
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=345.80 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=209.2
Q ss_pred CcCceecccCCceEEEEEecC--C--cEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 949 SDEFIIGSGGSGTVYKAELAN--G--ATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 949 ~~~~~lG~G~fg~V~~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
...++||+|.||.|++|.|.. | ..||||.++.........+|.+|+.+|.+++|||++++||+..+. ...+||
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~mMV~ 189 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAMMVF 189 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhhHHh
Confidence 344579999999999998753 3 369999998666555778999999999999999999999988652 357999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|.++.|+|.+.|++.. ...+-......++.|||.||.||..+ ++||||+.++|+++-....|||+|||+.+.
T Consensus 190 ELaplGSLldrLrka~-----~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAK-----KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred hhcccchHHHHHhhcc-----ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceec
Confidence 9999999999998732 56788899999999999999999999 999999999999999999999999999998
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
+....... .......-...|+|||.++...++.++|||+|||++|||+| |..||.+..+..+
T Consensus 262 Lg~ned~Y-vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI---------------- 324 (1039)
T KOG0199|consen 262 LGENEDMY-VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI---------------- 324 (1039)
T ss_pred cCCCCcce-EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH----------------
Confidence 76543222 22222345678999999999999999999999999999999 9999976643221
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
-+.+| -+..++.++.|+.+++++|+.||...|++||||..|.+.+
T Consensus 325 -L~~iD--~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 325 -LKNID--AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -HHhcc--ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 12222 2245666777999999999999999999999999997444
No 52
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.5e-36 Score=354.42 Aligned_cols=265 Identities=28% Similarity=0.425 Sum_probs=204.8
Q ss_pred hcCCCcCceecccCCceEEEEEe------cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL------ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 1017 (1251)
.++|+..+.||+|+||.||+|.+ .++..||||+++........+.+.+|+++++.+ +|||||+++|+|...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 34588889999999999999953 245689999997555444567889999999999 899999999988654
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCc------------------------------------------------------
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNI------------------------------------------------------ 1043 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------------------------ 1043 (1251)
...++||||+++|+|.++++......
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 34689999999999999997532100
Q ss_pred --------------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1044 --------------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1044 --------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
.....+++.++.+++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 0123578999999999999999999999 99999999999999999999999999997654322
Q ss_pred CCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhh
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL 1188 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1251)
.. .......++..|+|||.+.+..++.++|||||||++|||++ |..||........ ...+.
T Consensus 269 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~--------------- 330 (375)
T cd05104 269 NY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMI--------------- 330 (375)
T ss_pred cc--cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHH---------------
Confidence 11 11112345678999999999999999999999999999998 8999875432211 11111
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1189 DDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
........ +...+.++.+++.+||+.||++|||++||++.|++.
T Consensus 331 ~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 331 KEGYRMLS--PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HhCccCCC--CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11111111 112345789999999999999999999999999864
No 53
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-37 Score=331.15 Aligned_cols=265 Identities=23% Similarity=0.332 Sum_probs=204.6
Q ss_pred HHhhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCch-------------hhhHHHHHHHHHHHhccCCCccc
Q 000859 942 MGATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDH-------------LLNKSFTREVKTLGRIRHRHLVK 1007 (1251)
Q Consensus 942 ~~~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~ 1007 (1251)
....++|+..+.||+|.||.|-+|+ ..+++.||||++.+..-. ...+...+|++||++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456889999999999999999995 457899999999643211 11257889999999999999999
Q ss_pred eeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCC-CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 000859 1008 LMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKS-LDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNI 1086 (1251)
Q Consensus 1008 l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 1086 (1251)
++.+..+......|+|+|||..|.+...=. .+. ++..++++++.+++.||+|||.+ |||||||||+|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~--------d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNL 241 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPP--------DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNL 241 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCC--------CcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhhe
Confidence 999887777778999999999886543211 233 89999999999999999999999 999999999999
Q ss_pred eecCCCCeEEcccccccccccccCCC-CcccceeecccceecccccccCC----CCCccceeehhHHHHHHhhCCCCCCC
Q 000859 1087 LLDSNMEAHLGDFGLAKALVEDYNSN-TESNTWFAGSYGYIAPEYAYSLK----ATEKCDVYSMGIVLMELVSGKMPTDA 1161 (1251)
Q Consensus 1087 ll~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGv~l~el~tg~~p~~~ 1161 (1251)
|++++|+|||+|||.+..+....... ...-...+||+.|+|||...++. .+.+.||||+||++|.++.|+.||-+
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred EEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 99999999999999997653321111 11112368999999999887632 35689999999999999999999976
Q ss_pred ccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1162 TFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
....+. ..+++.+.+ .+|........+.++|++++.+||++|.+..+|..+.+-.-
T Consensus 322 ~~~~~l----------------~~KIvn~pL--~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 322 DFELEL----------------FDKIVNDPL--EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred chHHHH----------------HHHHhcCcc--cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 532211 111222111 12222234567899999999999999999999987765443
No 54
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=313.07 Aligned_cols=254 Identities=20% Similarity=0.313 Sum_probs=203.4
Q ss_pred cCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+.|+..+.||+|+|+.||++ ...+|+.+|+|++..+. .....+++.+|+.|-+.++|||||++...+.+ ....|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~--~~~~ylv 88 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYLV 88 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc--cceeEEE
Confidence 35667778999999999999 56689999999885432 23356788999999999999999999987644 4557999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC---CCeEEcccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN---MEAHLGDFG 1100 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG 1100 (1251)
+|+|+||+|..-+-. +..+++..+-....||++|++|+|.+ +|||||+||+|+++.+. --+|++|||
T Consensus 89 Fe~m~G~dl~~eIV~-------R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FG 158 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVA-------REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFG 158 (355)
T ss_pred EecccchHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccc
Confidence 999999998776644 24567888889999999999999999 99999999999999543 459999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+|..+. ....+.+++||++|||||++...+|+..+|||+.||++|-++.|++||.+..... +
T Consensus 159 vAi~l~-----~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--l----------- 220 (355)
T KOG0033|consen 159 LAIEVN-----DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--L----------- 220 (355)
T ss_pred eEEEeC-----CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--H-----------
Confidence 998764 3344556899999999999999999999999999999999999999998642211 1
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.+.+......-..+.+....++..+++++|+..||.+|.|+.|.++.=+
T Consensus 221 ---ye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 221 ---YEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ---HHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 1112222222223344556677889999999999999999999886544
No 55
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=322.00 Aligned_cols=269 Identities=25% Similarity=0.344 Sum_probs=206.9
Q ss_pred hhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccC-CchhhhHHHHHHHHHHHhccCCCccceeceeee---cCCC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCK-DDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCN---KGAG 1018 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~ 1018 (1251)
....|...+.||+|+||.|+.| ...+|+.||||++... ......+...+|+++++.++|+||+.+.+.+.. ..-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445666788999999999999 5668999999999632 344566788899999999999999999998765 2233
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..|+|+|+|+ -+|.+.++.+ ..++.+.+..+.+|+++|+.|+|+. +|+|||+||+|++++.+...||+|
T Consensus 100 DvYiV~elMe-tDL~~iik~~-------~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~D 168 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQ-------QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICD 168 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcC-------ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecc
Confidence 4699999994 5999999873 4599999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccc-cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAY-SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||+|+..... ......+.++.|..|+|||.+. ...|+.+.||||.||++.||++|++-|.+....+ ......
T Consensus 169 FGLAR~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~-----Ql~lI~ 241 (359)
T KOG0660|consen 169 FGLARYLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH-----QLQLIL 241 (359)
T ss_pred ccceeecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH-----HHHHHH
Confidence 9999987544 3344556678899999999764 5679999999999999999999999998763321 111111
Q ss_pred hccch-------------hhhhhhcccCCCCCCch---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1178 EMSGS-------------AREELLDDQMKPLLPGE---ECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~-------------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
+..+. .+..+..-...+..+.. ....+...+++.+|+..||.+|+|++|+++.
T Consensus 242 ~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 242 ELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111 11111111111222211 1245677899999999999999999999764
No 56
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.1e-36 Score=354.68 Aligned_cols=266 Identities=27% Similarity=0.429 Sum_probs=205.5
Q ss_pred hcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 1017 (1251)
.++|+..+.||+|+||.||+|... ++..||||++.........+.+.+|+++++.+ +|||||+++|+|...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~-- 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG-- 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--
Confidence 346888899999999999998532 23579999997665555567788999999999 899999999988654
Q ss_pred CceeEEEeecCCCChHHhhhcCCCC-------------------------------------------------------
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVN------------------------------------------------------- 1042 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~------------------------------------------------------- 1042 (1251)
...++||||+++|+|.++++.....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 4569999999999999998653210
Q ss_pred --------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCc
Q 000859 1043 --------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTE 1114 (1251)
Q Consensus 1043 --------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 1114 (1251)
......+++.++++++.||++|++|||++ +|+||||||+||++++++.+||+|||+++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~--~ 269 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY--V 269 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce--e
Confidence 01123578999999999999999999999 9999999999999999999999999999765332111 1
Q ss_pred ccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCC
Q 000859 1115 SNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMK 1193 (1251)
Q Consensus 1115 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1193 (1251)
......++..|+|||++.+..++.++|||||||++|||++ |+.||........ .... ......
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~---------------~~~~~~ 333 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKM---------------VKRGYQ 333 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHH---------------HHcccC
Confidence 1112235678999999998899999999999999999997 9999975432211 0000 000011
Q ss_pred CCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1194 PLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1194 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
... +...+.++.+++.+||+.||++|||+.++++.|++++
T Consensus 334 ~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 334 MSR--PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 111 1123467899999999999999999999999999875
No 57
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=373.24 Aligned_cols=509 Identities=28% Similarity=0.322 Sum_probs=319.2
Q ss_pred eeccCccCCCCCCccccCCCccceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccc
Q 000859 244 LNLGNNSLSGEIPSELGELSQLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNI 323 (1251)
Q Consensus 244 L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 323 (1251)
+|+++.++. .+|..+-.-..++.|+++.|-+-...-+...+--+|++|||++|++. ..|..+..+.+|+.|+++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 445555554 44444444334666666666554322222333344667777766665 5566666666666666666666
Q ss_pred cCcccccccccccchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeeccccccccccc
Q 000859 324 SGSIPRRICTNATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPF 403 (1251)
Q Consensus 324 ~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 403 (1251)
. . .|....++.+|++|.|.+|.+. ..|..+..+++|+.|+++.|.+. ..|..
T Consensus 81 ~-~-------------------------vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~ 132 (1081)
T KOG0618|consen 81 R-S-------------------------VPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLV 132 (1081)
T ss_pred h-h-------------------------Cchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchh
Confidence 5 2 2334445555555555555555 55555555555666666665555 34455
Q ss_pred ccccccccEEEecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCc
Q 000859 404 VANLSNLQELALYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLN 483 (1251)
Q Consensus 404 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 483 (1251)
+..++.+..+..++|.... .++... .+.+++..|.+.+.++..+.+++. .|+|.+|.+. . ..+..+.+|+
T Consensus 133 i~~lt~~~~~~~s~N~~~~----~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~ 202 (1081)
T KOG0618|consen 133 IEVLTAEEELAASNNEKIQ----RLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLE 202 (1081)
T ss_pred HHhhhHHHHHhhhcchhhh----hhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchh
Confidence 5556666666666662111 122222 666677777776666666666655 6777777765 2 2355667777
Q ss_pred EEeccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCeeeccccc
Q 000859 484 FLHLRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNR 563 (1251)
Q Consensus 484 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~ 563 (1251)
.|+...|+++.. --..++|+.|+.++|.++...+ -..-.+|+++++++|+++ .+|.++..+.+|+.|+..+|+
T Consensus 203 ~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~ 275 (1081)
T KOG0618|consen 203 VLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNR 275 (1081)
T ss_pred hhhhhhcccceE----EecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchh
Confidence 777777777632 1234677788888887763322 223456778888888887 456888888888888888888
Q ss_pred ccccccccccCccceeeecccCccccCCCCCCCCcccCceeecccCccccccCcccccccc-cceEEccCCcccCCCCcc
Q 000859 564 LNGRIATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRE-LSLLDLSGNSLTGPIPTQ 642 (1251)
Q Consensus 564 l~~~~~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~ 642 (1251)
|...+..++...+++++.+..|.+. .+|+.+..+..|++|+|..|+|....+..+..... |..|+.+.|++....--.
T Consensus 276 l~~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~ 354 (1081)
T KOG0618|consen 276 LVALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYE 354 (1081)
T ss_pred HHhhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccccccc
Confidence 8777777777777777777777775 56777777888888888888876444434444443 677777777776432222
Q ss_pred ccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCc
Q 000859 643 LLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLN 722 (1251)
Q Consensus 643 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 722 (1251)
-...+.|+.|++.+|.+++..-..+..+++|+.|+|++|++..+....+.++..|+.|+|+||+|+ .+|+.+..+..|+
T Consensus 355 e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~ 433 (1081)
T KOG0618|consen 355 ENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH 433 (1081)
T ss_pred chhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH
Confidence 234556777777777777666666666777777777777777654455666777777777777776 6666677777777
Q ss_pred eeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCC
Q 000859 723 VLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHN 802 (1251)
Q Consensus 723 ~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 802 (1251)
+|...+|+|. ..| .+..+++|+.+|+|.|.|+.. .+|+..- .++|++|||++|
T Consensus 434 tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~------------------------~l~~~~p-~p~LkyLdlSGN 486 (1081)
T KOG0618|consen 434 TLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEV------------------------TLPEALP-SPNLKYLDLSGN 486 (1081)
T ss_pred HHhhcCCcee-ech-hhhhcCcceEEecccchhhhh------------------------hhhhhCC-CcccceeeccCC
Confidence 7777777766 455 566666677666666666411 2333322 278999999999
Q ss_pred ccccCCchhhhhccCCCcEeeccccC
Q 000859 803 QLVGELPSQLGEMSSLGKLNLSYNDL 828 (1251)
Q Consensus 803 ~l~~~~p~~l~~l~~L~~L~l~~N~l 828 (1251)
.=...--..|..+.++...+++-|+-
T Consensus 487 ~~l~~d~~~l~~l~~l~~~~i~~~~~ 512 (1081)
T KOG0618|consen 487 TRLVFDHKTLKVLKSLSQMDITLNNT 512 (1081)
T ss_pred cccccchhhhHHhhhhhheecccCCC
Confidence 84323345677888888888887733
No 58
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.5e-36 Score=335.64 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=204.2
Q ss_pred cCCCcCceecccCCceEEEEEec----CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA----NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
++|++.+.||+|+||.||+|.++ .+..||+|+++........+.+.+|+.++++++||||++++|++... ...+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG--NTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC--CCcE
Confidence 45788889999999999999643 35689999998665555567899999999999999999999988643 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.
T Consensus 83 lv~e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~ 153 (266)
T cd05064 83 IVTEYMSNGALDSFLRKH------EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRR 153 (266)
T ss_pred EEEEeCCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcc
Confidence 999999999999999764 24689999999999999999999999 999999999999999999999999998
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+........ .......++..|+|||.+.+..++.++|||||||++||+++ |+.||......+ . .+..
T Consensus 154 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~---~~~~---- 221 (266)
T cd05064 154 LQEDKSEAI---YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--V---IKAV---- 221 (266)
T ss_pred cccccccch---hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--H---HHHH----
Confidence 754321110 11111245678999999999999999999999999999875 999997653221 1 1110
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.+ .. ..+.+..++..+.+++.+||+.+|++||++++|.+.|.++
T Consensus 222 -------~~-~~--~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 222 -------ED-GF--RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------HC-CC--CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01 10 1122333566789999999999999999999999998775
No 59
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-37 Score=304.78 Aligned_cols=271 Identities=22% Similarity=0.317 Sum_probs=211.6
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecC---CCc
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG---AGS 1019 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~---~~~ 1019 (1251)
..++|++.+.+|+|||+.||.++ ..+++.||+|++.+.. .+..+...+|++..++++||||++++++...+. ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 45689999999999999999994 6678999999998776 446678899999999999999999999876432 234
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.|++++|...|+|.+.+.... ..+..+++.++++++.+|++|+++||+. .++++||||||.||++++.+.+++.||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k---~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLK---IKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred EEEEeehhccccHHHHHHHHh---hcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 699999999999999998653 2245799999999999999999999997 346999999999999999999999999
Q ss_pred ccccccccccCCCC-----cccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHH
Q 000859 1100 GLAKALVEDYNSNT-----ESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1171 (1251)
|.++...-...... ..+.....|..|+|||.+. +...++++||||+||++|+|+.|..||+.....
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~------ 247 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ------ 247 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc------
Confidence 99876432111111 1122245689999999876 456789999999999999999999999743221
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
+....-.+.. ..-..|.....+..+.+++++|++.||.+||++.+++..+.+..
T Consensus 248 ---------GgSlaLAv~n-~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 ---------GGSLALAVQN-AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------CCeEEEeeec-cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111111111 01122233336778999999999999999999999999887653
No 60
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.8e-36 Score=339.58 Aligned_cols=252 Identities=23% Similarity=0.269 Sum_probs=197.0
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|+..+.||+|+||.||+|.. .+|+.||||++..... ....+.+.+|++++++++|++|+++++++... ...++||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~--~~~~lv~ 79 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK--DALCLVL 79 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC--CeEEEEE
Confidence 66778999999999999954 5789999999864432 22335678899999999999999999887543 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 80 e~~~~g~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 80 TIMNGGDLKFHIYNMG-----NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQ 151 (285)
T ss_pred EecCCCcHHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEE
Confidence 9999999998886532 34689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... ......||..|+|||++.+..++.++||||+||++|||++|+.||......... .....
T Consensus 152 ~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~---------- 215 (285)
T cd05631 152 IPEGE-----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDR---------- 215 (285)
T ss_pred cCCCC-----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHH----------
Confidence 43211 112346899999999999999999999999999999999999999764322110 00000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~ 1230 (1251)
.... .........+.++.+++.+||+.||++||+ ++++++.
T Consensus 216 -~~~~----~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 216 -RVKE----DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -Hhhc----ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0000 001111223457889999999999999997 7777763
No 61
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=320.90 Aligned_cols=273 Identities=20% Similarity=0.284 Sum_probs=226.5
Q ss_pred HHHHHHhhcCCCcCceecccCCceEEEEEecC------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceece
Q 000859 938 WEDIMGATNNLSDEFIIGSGGSGTVYKAELAN------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGH 1011 (1251)
Q Consensus 938 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~ 1011 (1251)
..++.....+++....+-+|.||.||+|.|++ .+.|-||.++..+++.....+.+|.-.+..+.|||+.++.|+
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 44555566777777889999999999996653 456889999888888888889999999999999999999999
Q ss_pred eeecCCCceeEEEeecCCCChHHhhhcCCC-CcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC
Q 000859 1012 CCNKGAGSNLLIYEYMENGSVWDWLHKQPV-NIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1012 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
+.++.. ..++++.++.-|+|..||.-.+. ..+..+.++..+...+|.|++.||+|||.+ +|||.||.++|+++|+
T Consensus 356 ~ie~~~-~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 356 SIEDYA-TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EeeccC-cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 887654 46899999999999999984332 223356678888999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhH
Q 000859 1091 NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDM 1169 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~ 1169 (1251)
..+||++|-.++|.+.+.++..-+... ..+.+||+||.+....|+.++|||||||++|||+| |+.||...++.|+..
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnE--nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ 509 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNE--NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEH 509 (563)
T ss_pred heeEEeccchhccccCcccccccCCCC--CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHH
Confidence 999999999999988776665444333 34689999999999999999999999999999999 999998765544311
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
++.+. .++..+-.|++++..+|..||..+|++||+++|++.-|.++-
T Consensus 510 -----------------ylkdG--yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 510 -----------------YLKDG--YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred -----------------HHhcc--ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11111 223345568899999999999999999999999999998874
No 62
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.5e-36 Score=346.78 Aligned_cols=243 Identities=21% Similarity=0.303 Sum_probs=194.0
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCCC
Confidence 3699999999999954 578999999986432 22334567889999999999999999988754 446799999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 1108 (1251)
+|+|.+++.. .+.+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~ 148 (323)
T cd05571 79 GGELFFHLSR-------ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred CCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence 9999999876 35689999999999999999999999 9999999999999999999999999998753211
Q ss_pred cCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhh
Q 000859 1109 YNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL 1188 (1251)
Q Consensus 1109 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1251)
........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .... .
T Consensus 149 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-----~~~~-----------~ 208 (323)
T cd05571 149 ----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-----FELI-----------L 208 (323)
T ss_pred ----CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH-----HHHH-----------H
Confidence 1122335799999999999999999999999999999999999999965422110 0000 0
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1189 DDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
.. ....+...+.++.+++.+|++.||++|| +++++++.
T Consensus 209 ~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 209 ME----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred cC----CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 00 0111122456788999999999999999 78888753
No 63
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=317.72 Aligned_cols=248 Identities=25% Similarity=0.410 Sum_probs=210.7
Q ss_pred CCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 948 LSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
|.++.+||+|+||.||+| +..+|+.||||.+.... ..+++.+|+.+|++++.|+||++||.|.... ..|+||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCC--ceEeehhh
Confidence 555668999999999999 55679999999996544 3578899999999999999999999775543 36999999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
|..|+..+.++.+ .+.++++++..+..+.++|++|||.. +-+|||||+.|||++.+|.+|++|||.|..+.
T Consensus 110 CGAGSiSDI~R~R------~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT 180 (502)
T KOG0574|consen 110 CGAGSISDIMRAR------RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLT 180 (502)
T ss_pred cCCCcHHHHHHHh------cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhh
Confidence 9999999999875 57899999999999999999999998 88999999999999999999999999997664
Q ss_pred cccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
+.. .......||+.|||||++..-.|+.++||||+|++..||..|++||.+..+... .-
T Consensus 181 DTM----AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-----------------IF 239 (502)
T KOG0574|consen 181 DTM----AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-----------------IF 239 (502)
T ss_pred hhH----HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-----------------eE
Confidence 332 223347899999999999999999999999999999999999999986643211 11
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
++.....|.+..++..+.++.+++++|+-+.|++|-|+-++++.
T Consensus 240 MIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 240 MIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred eccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 22333445566788899999999999999999999999988764
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1e-35 Score=342.29 Aligned_cols=260 Identities=25% Similarity=0.401 Sum_probs=206.6
Q ss_pred cCCCcCceecccCCceEEEEEec-CCc----EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGA----TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.+. +++ .||||++.........+.+.+|+.+++.++||||++++|+|... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---Cc
Confidence 45888999999999999999753 333 48999987555555667889999999999999999999988643 35
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++++||+++|+|.++++.. ...+++..+.+++.||+.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 84 ~~v~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG 154 (316)
T cd05108 84 QLITQLMPFGCLLDYVREH------KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFG 154 (316)
T ss_pred eeeeecCCCCCHHHHHHhc------cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccc
Confidence 7999999999999999864 24588999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+++.+....... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||++....+. ....
T Consensus 155 ~a~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~--~~~~------ 224 (316)
T cd05108 155 LAKLLGADEKEY--HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSIL------ 224 (316)
T ss_pred ccccccCCCcce--eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH--HHHH------
Confidence 998764322111 1111234678999999999999999999999999999998 9999975422111 1110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
... ...+.+..++.++.+++.+||+.||++||++.+++..+.++....
T Consensus 225 ---------~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 225 ---------EKG--ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ---------hCC--CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 000 011112224457889999999999999999999999999887654
No 65
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=354.81 Aligned_cols=270 Identities=24% Similarity=0.355 Sum_probs=215.4
Q ss_pred hcCCCcCceecccCCceEEEEEecCC-cEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceec-eeeec---C-C
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANG-ATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMG-HCCNK---G-A 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g-~~~~~---~-~ 1017 (1251)
..++++.++|.+|||+.||.|+...+ ..||+|++... ++...+...+|+++|+++. |||||.+++ ..... . .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 44567888999999999999976655 99999999877 6677889999999999996 999999999 33222 1 2
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++.||||+||.|-+++..+. ...|++.++++|+.|+++|+++||.. .++|||||||.+|||++.+|..|||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rl-----q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRL-----QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHH-----hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeC
Confidence 34689999999999999998643 34599999999999999999999996 5689999999999999999999999
Q ss_pred ccccccccccccCCCCc-----ccceeecccceeccccc---ccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhH
Q 000859 1098 DFGLAKALVEDYNSNTE-----SNTWFAGSYGYIAPEYA---YSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDM 1169 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~ 1169 (1251)
|||.|............ .......|+-|+|||.+ .+...++|+||||+||+||-++....||+......
T Consensus 189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la--- 265 (738)
T KOG1989|consen 189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA--- 265 (738)
T ss_pred cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---
Confidence 99998643322211110 01113568999999976 46779999999999999999999999998552211
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCccccc
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIVDFD 1243 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~~~~ 1243 (1251)
++... ..+|....+...+.+||..||+.||++||++.+|+..+.++.....--.+
T Consensus 266 -----------------Ilng~--Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~ 320 (738)
T KOG1989|consen 266 -----------------ILNGN--YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPD 320 (738)
T ss_pred -----------------EEecc--ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccc
Confidence 11111 22344456788899999999999999999999999999988876554433
No 66
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.5e-36 Score=341.64 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=197.7
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 79 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD--QRFLYML 79 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc--CCeEEEE
Confidence 678889999999999999965 468999999986432 22344668899999999999999999987754 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++... +.+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++
T Consensus 80 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~ 149 (291)
T cd05612 80 MEYVPGGELFSYLRNS-------GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAK 149 (291)
T ss_pred EeCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcch
Confidence 9999999999999763 4688999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. .+..
T Consensus 150 ~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-----~~~i------- 210 (291)
T cd05612 150 KLRDR-------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI-----YEKI------- 210 (291)
T ss_pred hccCC-------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHH-------
Confidence 65321 1124689999999999988999999999999999999999999976432111 1110
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~ 1230 (1251)
... ....+...+..+.+++.+|++.||.+||+ ++|+++.
T Consensus 211 ----~~~----~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 211 ----LAG----KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ----HhC----CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 000 01111123456889999999999999995 8887755
No 67
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.5e-36 Score=318.59 Aligned_cols=276 Identities=22% Similarity=0.305 Sum_probs=205.6
Q ss_pred CCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCC-ccceeceeeecCC----Cc
Q 000859 947 NLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRH-LVKLMGHCCNKGA----GS 1019 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~----~~ 1019 (1251)
.|...++||+|+||+||+| ...+|+.||+|+++...+ +-......+|+.++++++|+| ||++++++..... ..
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3556668999999999999 556789999999986654 334466789999999999999 9999998876542 35
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++|+||++. +|..|++..+... ..++...++.++.||++|++|||++ +|+||||||+||+++++|.+||+||
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~---~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKP---QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 6899999965 9999998764211 4567788999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|+|+.+.- .....+..++|..|+|||++.+. .|+...||||+||+++||++++.-|.+....+ .+....+....
T Consensus 165 GlAra~~i----p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGt 239 (323)
T KOG0594|consen 165 GLARAFSI----PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGT 239 (323)
T ss_pred chHHHhcC----CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCC
Confidence 99986532 22334456789999999998877 69999999999999999999999998764411 11111111111
Q ss_pred cc-chhhhhhhcccCCCCCCc-------h---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhh
Q 000859 1179 MS-GSAREELLDDQMKPLLPG-------E---ECAAYQVLEIALQCTKTSPQERPSSRQVCDL--LLNV 1234 (1251)
Q Consensus 1179 ~~-~~~~~~~~~~~~~~~~~~-------~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~~ 1234 (1251)
.. ..|.....-...+..++. . .....+..+++.+|++.+|.+|.|++.++.+ +.+.
T Consensus 240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 00 011111100111111111 0 1112468899999999999999999999876 4444
No 68
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.6e-35 Score=347.95 Aligned_cols=268 Identities=26% Similarity=0.392 Sum_probs=208.6
Q ss_pred hhcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~ 1016 (1251)
...+|.+.++||+|+||.||+|... .+..||||++.........+.+.+|+++++++. |||||+++|+|...
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~- 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS- 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC-
Confidence 3567888899999999999999642 234699999976665556678999999999995 99999999988543
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCCc-----------------------------------------------------
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVNI----------------------------------------------------- 1043 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~~----------------------------------------------------- 1043 (1251)
...++||||+++|+|.++++......
T Consensus 114 -~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 114 -GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred -CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 45799999999999999987532100
Q ss_pred ------------------------------------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 000859 1044 ------------------------------------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNIL 1087 (1251)
Q Consensus 1044 ------------------------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 1087 (1251)
.....+++.++.+++.|+++|++|||+. +|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 0123578899999999999999999999 9999999999999
Q ss_pred ecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccc
Q 000859 1088 LDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVE 1166 (1251)
Q Consensus 1088 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~ 1166 (1251)
++.++.+||+|||+++.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNY--VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccc--cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 999999999999999765332111 11122356788999999998899999999999999999997 999987542211
Q ss_pred hhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1167 MDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
... . .+.... ..+.+...+.++.+++.+||+.||++||++.+|.++|++++.
T Consensus 348 ~~~-~---------------~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 TFY-N---------------KIKSGY--RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHH-H---------------HHhcCC--CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 100 0 000000 111122345678999999999999999999999999998765
No 69
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-35 Score=342.69 Aligned_cols=267 Identities=24% Similarity=0.377 Sum_probs=205.2
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.++|+..+.||+|+||.||+|+.. ++..||+|++.........+.+.+|++++++++||||+++++++... ...++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEEEEE
Confidence 357888999999999999999654 68899999997655555567899999999999999999999988654 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++... ..+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 152 (331)
T cd06649 82 MEHMDGGSLDQVLKEA-------KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (331)
T ss_pred eecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence 9999999999999763 46889999999999999999999852 69999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh-ccc-
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME-MSG- 1181 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~- 1181 (1251)
..... ......||..|+|||++.+..++.++||||+||++|||++|+.||......+. ......... ...
T Consensus 153 ~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~ 224 (331)
T cd06649 153 QLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL--EAIFGRPVVDGEEG 224 (331)
T ss_pred ccccc------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccccC
Confidence 65321 11234689999999999998999999999999999999999999975432221 110000000 000
Q ss_pred -----------------------------hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1182 -----------------------------SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1182 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
......+.....+..+ ....+.++.+++.+||+.||++|||++|+++.-
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 225 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP-NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred CccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC-CccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000111111 112456789999999999999999999998764
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6e-36 Score=343.25 Aligned_cols=240 Identities=22% Similarity=0.294 Sum_probs=190.7
Q ss_pred ecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.. +...++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCCC
Confidence 69999999999965 468899999986432 23344677889999999999999999988754 45679999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-- 146 (312)
T cd05585 79 ELFHHLQRE-------GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-- 146 (312)
T ss_pred cHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC--
Confidence 999999763 4689999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ...... ..
T Consensus 147 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-----~~~~~~-----------~~- 207 (312)
T cd05585 147 --DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-----EMYRKI-----------LQ- 207 (312)
T ss_pred --CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-----HHHHHH-----------Hc-
Confidence 11223357899999999999999999999999999999999999999754221 111110 00
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH---HHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS---RQVCD 1229 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~---~eil~ 1229 (1251)
.....+...+.++.+++.+||+.||++||++ +|+++
T Consensus 208 ---~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 208 ---EPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred ---CCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 1111122345678899999999999999864 55543
No 71
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.1e-36 Score=345.51 Aligned_cols=246 Identities=22% Similarity=0.312 Sum_probs=197.7
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.+|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 95 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD--ENRVYF 95 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc--CCEEEE
Confidence 45888899999999999999654 68999999986432 22234678899999999999999999998865 445799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 96 v~e~~~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 165 (329)
T PTZ00263 96 LLEFVVGGELFTHLRK-------AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFA 165 (329)
T ss_pred EEcCCCCChHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCc
Confidence 9999999999999976 34678999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. .+.
T Consensus 166 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~------- 226 (329)
T PTZ00263 166 KKVPDR-------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI-----YEK------- 226 (329)
T ss_pred eEcCCC-------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH-----HHH-------
Confidence 765321 1124789999999999999999999999999999999999999975422110 010
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCDL 1230 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~ 1230 (1251)
.... ..+.+...+..+.+++.+||+.||.+||+ ++++++.
T Consensus 227 ----i~~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 227 ----ILAG----RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ----HhcC----CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0010 11111123456889999999999999997 6777644
No 72
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1e-35 Score=344.22 Aligned_cols=268 Identities=27% Similarity=0.413 Sum_probs=207.6
Q ss_pred cCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCC
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 1018 (1251)
.+|++.+.||+|+||.||+|... +++.||+|++.........+.+.+|+++++++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-GG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-CC
Confidence 46888899999999999999532 35789999997554444556788999999999 899999999987654 34
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCc------------------------------------------------------c
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNI------------------------------------------------------K 1044 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------------------------~ 1044 (1251)
..++++||+++|+|.+++....... .
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 5689999999999999986432100 0
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccc
Q 000859 1045 MRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYG 1124 (1251)
Q Consensus 1045 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~ 1124 (1251)
....+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.+...... .......++..
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~--~~~~~~~~~~~ 240 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKGDARLPLK 240 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch--hhccCCCCCcc
Confidence 123689999999999999999999999 9999999999999999999999999999875332111 11122345778
Q ss_pred eecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHH
Q 000859 1125 YIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAA 1203 (1251)
Q Consensus 1125 y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1203 (1251)
|+|||++.+..++.++||||+||++|||++ |+.||.+....+. .... . ........ +....
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~---~------------~~~~~~~~--~~~~~ 302 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRR---L------------KEGTRMRA--PEYAT 302 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHH---H------------hccCCCCC--CccCC
Confidence 999999999999999999999999999998 9999975432211 1110 0 00001111 12234
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1204 YQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1204 ~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.++.+++.+||+.+|++||++.|++++|+++++.
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999998764
No 73
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.8e-36 Score=335.06 Aligned_cols=250 Identities=33% Similarity=0.534 Sum_probs=194.0
Q ss_pred CceecccCCceEEEEEec-----CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 951 EFIIGSGGSGTVYKAELA-----NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+.||.|+||.||+|.+. .+..||||++.........+.|.+|++.+++++||||++++|++... ...++|+|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~--~~~~lv~e 81 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN--EPLFLVME 81 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS--SSEEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc--cccccccc
Confidence 457999999999999776 35789999997655655678999999999999999999999999743 33799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.++++... ...+++..+.+|+.||++||+|||++ +++|+||+++||++++++.+||+|||+++..
T Consensus 82 ~~~~g~L~~~L~~~~-----~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKN-----KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp --TTEBHHHHHHHTC-----TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ccccccccccccccc-----cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 999999999998752 35789999999999999999999999 9999999999999999999999999999765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... ........+...|+|||.+....++.++||||||+++||+++ |+.||......+ ..+...
T Consensus 154 ~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-----~~~~~~------- 219 (259)
T PF07714_consen 154 SEKSK--YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-----IIEKLK------- 219 (259)
T ss_dssp TTSSS--EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-----HHHHHH-------
T ss_pred ccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccc-------
Confidence 22111 112222456789999999998889999999999999999999 789986552211 111111
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
+.. ..+.+..++..+.+++.+||+.||++|||++++++.|
T Consensus 220 ----~~~---~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 ----QGQ---RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTE---ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ccc---cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 100 0112223456788999999999999999999999876
No 74
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-35 Score=337.16 Aligned_cols=268 Identities=20% Similarity=0.260 Sum_probs=198.4
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|...+.||+|+||.||+|.. .+++.||+|++...........+.+|++++++++||||+++++++.. ....++|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT--ERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC--CCeEEEE
Confidence 35688889999999999999954 47899999999755444344677899999999999999999998754 3457899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++ |+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++
T Consensus 82 ~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~ 151 (288)
T cd07871 82 FEYLD-SDLKQYLDNC------GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLAR 151 (288)
T ss_pred EeCCC-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCccee
Confidence 99997 4999998754 24578999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
..... ........|++.|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+. ..............
T Consensus 152 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 226 (288)
T cd07871 152 AKSVP----TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEE 226 (288)
T ss_pred eccCC----CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChH
Confidence 54321 111223467999999998865 5689999999999999999999999976533221 11111100000000
Q ss_pred hhhhh-----hcccCCCCC------CchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 AREEL-----LDDQMKPLL------PGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~-----~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... +.....+.. ......+.+..+++.+|++.||.+|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 227 TWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 000000000 001113456789999999999999999999975
No 75
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-36 Score=340.20 Aligned_cols=243 Identities=23% Similarity=0.360 Sum_probs=197.7
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCce
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 1020 (1251)
..+|...++||+|.||+|+.+.. .+++.+|||++++.. ...+.+..+.|..|+... +||.++.++..|. .....
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQ--T~~~l 444 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQ--TKEHL 444 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccc--cCCeE
Confidence 34688889999999999999965 467899999998664 333557778898888877 5999999988664 45668
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++||||+.||++..+.+ .+.+++..++-+|..|+.||+|||++ +||+||+|.+|||+|.+|.+||+|||
T Consensus 445 ~fvmey~~Ggdm~~~~~--------~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH--------TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred EEEEEecCCCcEEEEEe--------cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccc
Confidence 99999999999555444 36799999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+++... . .....+.++||+.|||||++.+..|+.++|+|||||++|||+.|+.||.+....+.
T Consensus 514 lcKe~m---~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~------------- 576 (694)
T KOG0694|consen 514 LCKEGM---G-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV------------- 576 (694)
T ss_pred cccccC---C-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------------
Confidence 997532 1 22244558999999999999999999999999999999999999999987644322
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS 1224 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1224 (1251)
++.........+...+.+...||++++.++|++|--+
T Consensus 577 -------FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 577 -------FDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------HHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1111111222233356678899999999999999766
No 76
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.3e-35 Score=332.89 Aligned_cols=263 Identities=25% Similarity=0.462 Sum_probs=207.3
Q ss_pred cCCCcCceecccCCceEEEEEecC------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.+|+..+.||+|+||.||+|.... ...||+|.+.........+.+.+|++++++++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--QP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--Cc
Confidence 357888899999999999996532 2579999997665555667899999999999999999999988644 44
Q ss_pred eeEEEeecCCCChHHhhhcCCCCc---------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNI---------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
.+++|||+++|+|.+++....... .....+++.++..++.|++.|++|||+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 689999999999999997642211 1125688999999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhH
Q 000859 1091 NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDM 1169 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~ 1169 (1251)
++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+.
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~-- 235 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYY--RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV-- 235 (283)
T ss_pred CCcEEECCCcceeeccccccc--cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--
Confidence 999999999999765322111 11222356789999999988899999999999999999998 9999976533211
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
... +.... ..+.+..++.++.+++.+||+.||.+||+++||.+.|+.+
T Consensus 236 ~~~--------------i~~~~---~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 236 IEM--------------IRSRQ---LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHH--------------HHcCC---cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 110 00111 1112334567899999999999999999999999999753
No 77
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=322.49 Aligned_cols=249 Identities=23% Similarity=0.335 Sum_probs=209.3
Q ss_pred cCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.-|...+.||+|.|+.|-.|+ .-+|+.||||++.+.. +......+.+|+.-|+-++|||||++|.+. +.....|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi--DTQTKlyLi 95 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI--DTQTKLYLI 95 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh--cccceEEEE
Confidence 346777789999999999994 4589999999996543 455667889999999999999999999876 445668999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee-cCCCCeEEcccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL-DSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~DfG~a 1102 (1251)
+|.-++|+|++|+-++ ...+.++.+.+++.||+.|+.|+|+. .+||||+||+||.+ ..-|-||++|||++
T Consensus 96 LELGD~GDl~DyImKH------e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFS 166 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKH------EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFS 166 (864)
T ss_pred EEecCCchHHHHHHhh------hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecccc
Confidence 9999999999999876 46789999999999999999999999 89999999999987 56789999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCC-CccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKAT-EKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
-.+.+ ...-...+|+..|.|||++.+..|+ +++||||+||++|.+.+|++||......+
T Consensus 167 Nkf~P-----G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE--------------- 226 (864)
T KOG4717|consen 167 NKFQP-----GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE--------------- 226 (864)
T ss_pred ccCCC-----cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh---------------
Confidence 76643 2333447899999999999999987 57899999999999999999997553322
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+...+..++..+.....++.++|..|+..||.+|.+.++|+..
T Consensus 227 -----TLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 227 -----TLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred -----hhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 22223335566677788899999999999999999999999754
No 78
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.3e-35 Score=340.26 Aligned_cols=243 Identities=21% Similarity=0.304 Sum_probs=193.8
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT--KDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCEEEEEEeCCC
Confidence 3699999999999954 568999999996432 22345677889999999999999999987754 445799999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 1108 (1251)
+|+|.+++.. .+.+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~g~L~~~l~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~ 148 (328)
T cd05593 79 GGELFFHLSR-------ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD 148 (328)
T ss_pred CCCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc
Confidence 9999999876 34689999999999999999999999 9999999999999999999999999998753221
Q ss_pred cCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhh
Q 000859 1109 YNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL 1188 (1251)
Q Consensus 1109 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1251)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......+. .... .
T Consensus 149 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~-----~~~~-----------~ 208 (328)
T cd05593 149 ----AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-----FELI-----------L 208 (328)
T ss_pred ----ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH-----HHHh-----------c
Confidence 1112235789999999999998999999999999999999999999975422111 1000 0
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1189 DDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
. .....+...+.++.+++.+|++.||++|| +++|+++.
T Consensus 209 ~----~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 209 M----EDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred c----CCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0 00111122455688999999999999997 89998864
No 79
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-36 Score=301.48 Aligned_cols=258 Identities=24% Similarity=0.382 Sum_probs=206.2
Q ss_pred HHHHhhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-------chhhhHHHHHHHHHHHhc-cCCCccceec
Q 000859 940 DIMGATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-------DHLLNKSFTREVKTLGRI-RHRHLVKLMG 1010 (1251)
Q Consensus 940 ~~~~~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l-~h~niv~l~g 1010 (1251)
+-.+..+.|...+.+|.|..++|.++ ...+|.++|+|++.... .....++-.+|+.|++++ .||+|+++.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 33444556778889999999999999 56688999999985332 122345667899999999 6999999999
Q ss_pred eeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC
Q 000859 1011 HCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1011 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
+|.. +...++|+|.|+.|.|.|||.. .-.+++.+.++|+.|+.+|++|||.+ .|||||+||+|||+++
T Consensus 91 ~yes--~sF~FlVFdl~prGELFDyLts-------~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 91 VYES--DAFVFLVFDLMPRGELFDYLTS-------KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred eccC--cchhhhhhhhcccchHHHHhhh-------heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 8844 4556899999999999999987 45789999999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccccCCCCcccceeecccceecccccc------cCCCCCccceeehhHHHHHHhhCCCCCCCccc
Q 000859 1091 NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAY------SLKATEKCDVYSMGIVLMELVSGKMPTDATFG 1164 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~ 1164 (1251)
+.++||+|||+|..+.+ ...-...+||++|.|||.+. ...|+..+|+||.||++|.++.|++||.-.
T Consensus 159 n~~i~isDFGFa~~l~~-----GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR-- 231 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEP-----GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR-- 231 (411)
T ss_pred ccceEEeccceeeccCC-----chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--
Confidence 99999999999987643 23334479999999999875 346888999999999999999999998522
Q ss_pred cchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1165 VEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+.+.. ..+....+.-..|.+...+..+.++|.+|++.||.+|.|++|+++.
T Consensus 232 -----kQmlML---------R~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 232 -----KQMLML---------RMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -----HHHHHH---------HHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 111111 1111122223334556677789999999999999999999998764
No 80
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2e-37 Score=342.27 Aligned_cols=358 Identities=30% Similarity=0.413 Sum_probs=231.8
Q ss_pred EEeecccccc-cccccccccccccEEEecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCc
Q 000859 389 LYLHNNSLVG-SISPFVANLSNLQELALYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNS 467 (1251)
Q Consensus 389 L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 467 (1251)
.|+++|.++| ..|.....++.++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.+++..|+
T Consensus 12 vDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~ 89 (1255)
T KOG0444|consen 12 VDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNN 89 (1255)
T ss_pred ccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccc
Confidence 3344444432 23444455555666666666665 67777888888888888888877 566677778888888888887
Q ss_pred cc-CCCCCcccccCCCcEEeccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCch
Q 000859 468 FT-GEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPG 546 (1251)
Q Consensus 468 l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 546 (1251)
+. .-+|..+.++..|+.|+||+|+++ +.|..+...+++..|+||+|+|..++-..|-+|+.|-.||||+|+++ .+|.
T Consensus 90 LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPP 167 (1255)
T KOG0444|consen 90 LKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPP 167 (1255)
T ss_pred cccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCH
Confidence 75 356778888888888888888888 78888888888888999999888666666788888888999999988 5677
Q ss_pred hhhhhcCCCeeecccccccccc-cccccCccceeeecccCccccCCCCCCCCcccCceeecccCccc-cccCcccccccc
Q 000859 547 SLINLRNLTRINFSKNRLNGRI-ATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFI-GKIPWTFGKIRE 624 (1251)
Q Consensus 547 ~l~~l~~L~~L~l~~N~l~~~~-~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~ 624 (1251)
.+..|..|++|.|++|++...- ..+++ +++|+.|.+++.+-+ ..+|.++..+.+
T Consensus 168 Q~RRL~~LqtL~Ls~NPL~hfQLrQLPs------------------------mtsL~vLhms~TqRTl~N~Ptsld~l~N 223 (1255)
T KOG0444|consen 168 QIRRLSMLQTLKLSNNPLNHFQLRQLPS------------------------MTSLSVLHMSNTQRTLDNIPTSLDDLHN 223 (1255)
T ss_pred HHHHHhhhhhhhcCCChhhHHHHhcCcc------------------------chhhhhhhcccccchhhcCCCchhhhhh
Confidence 7888888999999999886431 22333 344444444443322 234555555555
Q ss_pred cceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccccccccceeeccC
Q 000859 625 LSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDG 704 (1251)
Q Consensus 625 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 704 (1251)
|..+|+|+|.+. .+|+.+..+.+|+.|+||+|.|+ .+....+...+|+.|+||+|+++. +|.+++++++|+.|++.+
T Consensus 224 L~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 224 LRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTV-LPDAVCKLTKLTKLYANN 300 (1255)
T ss_pred hhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhcc-chHHHhhhHHHHHHHhcc
Confidence 555555555555 45555555555555555555555 334444555556666666666653 566666666666666666
Q ss_pred cccccc-cCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcc
Q 000859 705 NMLNGS-LPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNF 780 (1251)
Q Consensus 705 N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l 780 (1251)
|+++-+ +|..++.|..|+++..++|.+. .+|+.+++|.+|+.|.|+.|+|. .+|++|.-|+.|. +||+..|.=
T Consensus 301 NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~-vLDlreNpn 374 (1255)
T KOG0444|consen 301 NKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLK-VLDLRENPN 374 (1255)
T ss_pred CcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcc-eeeccCCcC
Confidence 665422 5555666666666666666665 55666666666666666666665 4566666666653 356665543
No 81
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=342.67 Aligned_cols=246 Identities=22% Similarity=0.296 Sum_probs=197.2
Q ss_pred cCCCcCceecccCCceEEEEEecC--CcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN--GATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
++|...+.||+|+||.||+|..+. +..||+|++.... .....+.+.+|+++++.++||||+++++++... ...+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~~~~ 107 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--SYLY 107 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC--CEEE
Confidence 358888999999999999996543 3689999986432 223446788999999999999999999988654 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 lv~Ey~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~ 177 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRN-------KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGF 177 (340)
T ss_pred EEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCC
Confidence 999999999999999763 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ...
T Consensus 178 a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-----~~~------ 239 (340)
T PTZ00426 178 AKVVDTR-------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI-----YQK------ 239 (340)
T ss_pred CeecCCC-------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH-----HHH------
Confidence 9764221 1235789999999999988899999999999999999999999975432111 000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
..... ...+...+..+.+++.+|++.||++|+ +++++++.
T Consensus 240 -----i~~~~----~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 240 -----ILEGI----IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----HhcCC----CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 00100 001122345678999999999999995 88888764
No 82
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.5e-35 Score=327.29 Aligned_cols=251 Identities=26% Similarity=0.451 Sum_probs=200.1
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
++|+..+.||+|+||.||+|+++++..||+|.+.... ...+.+.+|++++++++||||+++++++... ...++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ--KPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEccC--CCEEEEEE
Confidence 4577788999999999999998888899999985332 2346788999999999999999999988553 45799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++..
T Consensus 80 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 80 FMENGCLLNYLRQR------QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred cCCCCcHHHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcccc
Confidence 99999999999753 23588999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
...... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||......+. ......
T Consensus 151 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~-----~~~i~~------ 216 (256)
T cd05114 151 LDDEYT---SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-----VEMISR------ 216 (256)
T ss_pred CCCcee---ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHC------
Confidence 322111 1122345678999999988889999999999999999999 9999975532111 111100
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
. .... .+...+.++.+++.+||+.+|++||+++++++.|
T Consensus 217 -----~-~~~~--~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 217 -----G-FRLY--RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -----C-CCCC--CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0 0001 1112345689999999999999999999999876
No 83
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.3e-35 Score=341.86 Aligned_cols=252 Identities=23% Similarity=0.282 Sum_probs=200.6
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|+++++.++||||+++++++.. ....++|
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~lv 79 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD--DEYLYLA 79 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--CCEEEEE
Confidence 6888899999999999999664 58999999996442 12234578889999999999999999988754 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~-------~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 80 MEYVPGGDFRTLLNN-------LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred EeCCCCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 999999999999976 34688999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...+...
T Consensus 150 ~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~------- 213 (333)
T cd05600 150 GIVT-------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WENLKYW------- 213 (333)
T ss_pred cccc-------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHHHHhc-------
Confidence 6432 12235789999999999999999999999999999999999999976533221 0000000
Q ss_pred hhhhhcccCCCCCC-chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLP-GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... . ..+... .....+.++.+++.+|++.+|.+||+++++++.
T Consensus 214 ~~~-~---~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 214 KET-L---QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccc-c---cCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000 0 001110 011245678899999999999999999999865
No 84
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.7e-35 Score=340.94 Aligned_cols=242 Identities=22% Similarity=0.325 Sum_probs=192.7
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
+.||+|+||.||+++. .+|+.||+|++.... .......+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEEEeCCC
Confidence 3699999999999954 578999999986432 22344567789999999999999999998754 346799999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 1108 (1251)
+|+|..++.. .+.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 148 (323)
T cd05595 79 GGELFFHLSR-------ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred CCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence 9999998876 34689999999999999999999999 9999999999999999999999999998653221
Q ss_pred cCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhh
Q 000859 1109 YNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL 1188 (1251)
Q Consensus 1109 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1251)
........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ... ..
T Consensus 149 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-----~~~-----------~~ 208 (323)
T cd05595 149 ----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-----FEL-----------IL 208 (323)
T ss_pred ----CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-----HHH-----------Hh
Confidence 1112235689999999999999999999999999999999999999965422111 000 00
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 000859 1189 DDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCD 1229 (1251)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1229 (1251)
.. ....+...++++.+++.+||+.||++|| +++++++
T Consensus 209 ~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 209 ME----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred cC----CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 00 0011122456788999999999999998 8888875
No 85
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.6e-35 Score=336.87 Aligned_cols=269 Identities=21% Similarity=0.306 Sum_probs=198.5
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.++|+..+.||+|+||.||+|+.. +++.||||++...........+.+|+.+++.++||||+++++++.. +...++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec--CCeEEEE
Confidence 467899999999999999999654 6899999999755444344567889999999999999999998864 3457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++ +++.+++... ...++++.+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 ~e~~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 151 (303)
T cd07869 82 FEYVH-TDLCQYMDKH------PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLAR 151 (303)
T ss_pred EECCC-cCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcce
Confidence 99995 6888888754 35688999999999999999999999 99999999999999999999999999986
Q ss_pred ccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.....................
T Consensus 152 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 227 (303)
T cd07869 152 AKSVP----SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 227 (303)
T ss_pred eccCC----CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChh
Confidence 53221 111223467899999998865 4588999999999999999999999986543222221111110000000
Q ss_pred -hh-----hhhhcccCCCCCCch--H-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 -AR-----EELLDDQMKPLLPGE--E-----CAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 -~~-----~~~~~~~~~~~~~~~--~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
+. ............+.. . .....+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 000000000000000 0 01246789999999999999999999985
No 86
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4e-35 Score=332.09 Aligned_cols=272 Identities=28% Similarity=0.383 Sum_probs=206.7
Q ss_pred CCcCceecccCCceEEEEEe-----cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-----ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
|...+.||+|+||+||++.+ .+++.||+|++.........+.+.+|++++++++||||+++++++........++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37788999999999988643 3578999999976544445678889999999999999999999887665566799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++
T Consensus 86 v~e~~~~~~l~~~~~~--------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~ 154 (283)
T cd05080 86 IMEYVPLGSLRDYLPK--------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 154 (283)
T ss_pred EecCCCCCCHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccc
Confidence 9999999999999975 2489999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+........ ........++..|+|||.+.+..++.++||||||+++|||+||+.||............+... .....
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~ 231 (283)
T cd05080 155 KAVPEGHEY-YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG--QMTVV 231 (283)
T ss_pred cccCCcchh-hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc--ccchh
Confidence 765432111 111122345677999999988889999999999999999999999986442211111100000 00000
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
......+.... .+.+...+.++.+++.+||+.||++|||++++++.|+++-
T Consensus 232 ~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMR--LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCC--CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11111111111 1122335678999999999999999999999999998763
No 87
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-36 Score=333.18 Aligned_cols=253 Identities=25% Similarity=0.345 Sum_probs=211.3
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.+|...+++|+|+||.++.++. .++..||+|++.-.. .+..++...+|+.++++++|||||.+.+.|.+++ ...+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~-~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG-QLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC-ceEEEE
Confidence 4688889999999999999944 467889999997554 3344557889999999999999999999886543 337999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|+|++||++.+.+.++. +..++++.+.+++.|++.|+.|||+. .|+|||||+.||+++.++.|||+|||+|+
T Consensus 83 m~Y~eGg~l~~~i~~~k-----~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK 154 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-----GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAK 154 (426)
T ss_pred EeecCCCCHHHHHHHHh-----hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhh
Confidence 99999999999998864 57789999999999999999999998 99999999999999999999999999999
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
.+..+. ......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|.+..-.. .
T Consensus 155 ~l~~~~----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~-----L----------- 214 (426)
T KOG0589|consen 155 ILNPED----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE-----L----------- 214 (426)
T ss_pred hcCCch----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH-----H-----------
Confidence 875443 23344789999999999999999999999999999999999999998652211 1
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..++.... ..|.+.....++..+++.|++.+|+.||++.+++..
T Consensus 215 i~ki~~~~---~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 215 ILKINRGL---YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcc---CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11111111 123445567789999999999999999999999987
No 88
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.7e-35 Score=338.30 Aligned_cols=243 Identities=23% Similarity=0.357 Sum_probs=192.8
Q ss_pred ceecccCCceEEEEEe----cCCcEEEEEEeccCC---chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 952 FIIGSGGSGTVYKAEL----ANGATVAVKKISCKD---DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+.||+|+||.||+++. .+++.||||++.... .....+.+.+|+++++.++||||+++++++... ...++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG--GKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC--CeEEEEE
Confidence 5799999999999964 357899999986432 222345677899999999999999999988654 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.. .+.+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 80 EYLSGGELFMHLER-------EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKE 149 (323)
T ss_pred eCCCCchHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence 99999999999976 34678889999999999999999999 999999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....
T Consensus 150 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~--------- 211 (323)
T cd05584 150 SIHE----GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDK--------- 211 (323)
T ss_pred cccC----CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHH---------
Confidence 3221 11122356899999999999888999999999999999999999999754221 11111
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
... .....+...++++.+++.+|++.||++|| +++++++.
T Consensus 212 --~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 212 --ILK----GKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred --HHc----CCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 001 11111222345688999999999999999 78888763
No 89
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.5e-35 Score=326.81 Aligned_cols=256 Identities=24% Similarity=0.396 Sum_probs=204.9
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.++|+..++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.. ....+++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTK--EEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCCcEEEE
Confidence 34688889999999999999988888899999986432 235788999999999999999999987754 34569999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.++++... ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 81 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 81 EYMAKGSLLDFLKSDE-----GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred ecCCCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCcccee
Confidence 9999999999997642 45688999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... .......++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ..... .
T Consensus 153 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~---~------ 218 (261)
T cd05072 153 IEDNEY---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSAL---Q------ 218 (261)
T ss_pred cCCCce---eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHH---H------
Confidence 533211 11122345778999999988889999999999999999998 999997542211 11110 0
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
. .. ..+.....+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 219 -----~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 219 -----R-GY--RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -----c-CC--CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0 00 0111122456788999999999999999999999999864
No 90
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.9e-35 Score=345.08 Aligned_cols=256 Identities=22% Similarity=0.297 Sum_probs=196.4
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.|...+.||+|+||+||+|. ..+++.||||++.... .....+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 57788899999999999995 4568899999996543 23345678899999999999999999998864 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.+. +.+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~E~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~ 149 (381)
T cd05626 80 MDYIPGGDMMSLLIRM-------EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCT 149 (381)
T ss_pred EecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence 9999999999999763 4688999999999999999999999 99999999999999999999999999986
Q ss_pred ccccccCCC-------------------------------------------CcccceeecccceecccccccCCCCCcc
Q 000859 1104 ALVEDYNSN-------------------------------------------TESNTWFAGSYGYIAPEYAYSLKATEKC 1140 (1251)
Q Consensus 1104 ~~~~~~~~~-------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~s 1140 (1251)
.+....... ........||+.|+|||++.+..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~ 229 (381)
T cd05626 150 GFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLC 229 (381)
T ss_pred ccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcc
Confidence 432110000 0001124699999999999988999999
Q ss_pred ceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHH--ccccCC
Q 000859 1141 DVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQ--CTKTSP 1218 (1251)
Q Consensus 1141 DiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP 1218 (1251)
||||+||++|||++|+.||......+.... ..........+.....++++.+++.+ |+..+|
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~----------------i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLK----------------VINWENTLHIPPQVKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHH----------------HHccccccCCCCCCCCCHHHHHHHHHHccCcccc
Confidence 999999999999999999976532211100 00000001112222234567788877 556677
Q ss_pred CCCCCHHHHHHH
Q 000859 1219 QERPSSRQVCDL 1230 (1251)
Q Consensus 1219 ~~RPs~~eil~~ 1230 (1251)
..||+++|+++.
T Consensus 294 ~~R~~~~~~l~h 305 (381)
T cd05626 294 LGRNGADDIKAH 305 (381)
T ss_pred cCCCCHHHHhcC
Confidence 779999999874
No 91
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.3e-35 Score=331.90 Aligned_cols=268 Identities=22% Similarity=0.300 Sum_probs=198.4
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|++.+.||+|+||+||+|+.+ +++.||||++.... .....+.+.+|+++++.++||||+++++++.. ....++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--RGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec--CCEEEEE
Confidence 36888899999999999999664 68899999987543 22345678899999999999999999998854 3457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++++.+..+.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 79 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~ 148 (287)
T cd07848 79 FEYVEKNMLELLEEM-------PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFAR 148 (287)
T ss_pred EecCCCCHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence 999998766554332 34689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
....... .......||..|+|||++.+..++.++||||+||++|||++|+.||.+....+. ...............
T Consensus 149 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~ 224 (287)
T cd07848 149 NLSEGSN---ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQ 224 (287)
T ss_pred ccccccc---ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHH
Confidence 6532211 112235689999999999988899999999999999999999999976533221 111000000000000
Q ss_pred hhhhh-c----ccCCCCCCc--------hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 REELL-D----DQMKPLLPG--------EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~~~~~-~----~~~~~~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... + ....+.... ....+.++.+++.+|++.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 225 MKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 0 000000000 0113567899999999999999999999875
No 92
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.2e-35 Score=325.98 Aligned_cols=257 Identities=27% Similarity=0.415 Sum_probs=205.6
Q ss_pred cCCCcCceecccCCceEEEEEecC----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
++|+..+.||+|+||+||+|.+.. ...||||++.........+.|.+|+.++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--RPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC--CceE
Confidence 468888999999999999997642 4579999987666665667899999999999999999999987543 4468
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|.+++... ...+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+|++|||+
T Consensus 82 iv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~ 152 (266)
T cd05033 82 IITEYMENGSLDKFLREN------DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGL 152 (266)
T ss_pred EEEEcCCCCCHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccch
Confidence 999999999999999764 24689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
++........ .......++..|+|||.+.+..++.++||||||+++||+++ |..||......+ .....
T Consensus 153 ~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~------- 221 (266)
T cd05033 153 SRRLEDSEAT--YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKAV------- 221 (266)
T ss_pred hhcccccccc--eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHHH-------
Confidence 9876421111 11112234678999999998899999999999999999998 999986542211 11100
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
... . ..+.+..++..+.+++.+||+.+|++||+++++++.|+++
T Consensus 222 -------~~~-~--~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 222 -------EDG-Y--RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -------HcC-C--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 0 0111223456789999999999999999999999999876
No 93
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7.8e-35 Score=324.37 Aligned_cols=251 Identities=22% Similarity=0.370 Sum_probs=199.0
Q ss_pred eecccCCceEEEEEec---CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 953 IIGSGGSGTVYKAELA---NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
.||+|+||.||+|.+. ++..||+|++.........+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCCC
Confidence 4899999999999653 3557999999766555556789999999999999999999998732 346899999999
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
|+|.+++... ...+++..+.+++.|++.|++|||++ +++||||||+||+++.++.+|++|||.++.+..+.
T Consensus 79 ~~L~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 149 (257)
T cd05115 79 GPLNKFLSGK------KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADD 149 (257)
T ss_pred CCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCc
Confidence 9999999753 34689999999999999999999999 99999999999999999999999999997653322
Q ss_pred CCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhh
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL 1188 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1251)
... .......++..|+|||.+....++.++|||||||++||+++ |+.||......+. ....
T Consensus 150 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~------------ 211 (257)
T cd05115 150 SYY-KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-----MSFI------------ 211 (257)
T ss_pred cce-eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHH------------
Confidence 111 11111234678999999988889999999999999999997 9999976532211 1000
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1189 DDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
..... .+.+..++.++.+++.+||+.||++||++.+|.+.|+.++
T Consensus 212 ~~~~~--~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 212 EQGKR--LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 00011 1122234567889999999999999999999999998875
No 94
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.1e-35 Score=342.33 Aligned_cols=269 Identities=23% Similarity=0.303 Sum_probs=197.8
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC---Ccee
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---GSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---~~~~ 1021 (1251)
+|+..+.||+|+||.||+|. ..+++.||||++.... .......+.+|++++++++||||+++++++..... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 47788899999999999995 4578999999986432 22234568899999999999999999998764332 2468
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||++ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 lv~e~~~-~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-------DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred EEEecCC-CCHHHHHHhc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 9999995 6899998763 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceeccccccc--CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYS--LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
++........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ....+......
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~ 226 (338)
T cd07859 150 ARVAFNDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDLLGT 226 (338)
T ss_pred ccccccccCc-cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCC
Confidence 9764322111 112233578999999999865 678999999999999999999999997643211 11111000000
Q ss_pred c---------chhhhhhhcccCCCCCCc--h---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 S---------GSAREELLDDQMKPLLPG--E---ECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~---------~~~~~~~~~~~~~~~~~~--~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
. ........... .+..+. . ...+.++.+++.+||+.||++|||++|+++.
T Consensus 227 ~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 227 PSPETISRVRNEKARRYLSSM-RKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCHHHHHHhhhhhHHHHHHhh-cccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 00000001100 000000 0 1134567899999999999999999999864
No 95
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.5e-35 Score=342.97 Aligned_cols=247 Identities=26% Similarity=0.417 Sum_probs=191.8
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
|+..+.||+|+||.||+|.. .+++.||||++.........+.+.+|+++++.++|+||+++++++.. ....++||||
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~ 153 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH--NGEIQVLLEF 153 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc--CCeEEEEEec
Confidence 55667899999999999965 46899999999766555566789999999999999999999998754 4457899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++|+|.+. ....+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 154 ~~~~~L~~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 154 MDGGSLEGT-----------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCCCccccc-----------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 999988643 2345677889999999999999999 99999999999999999999999999997653
Q ss_pred cccCCCCcccceeecccceeccccccc-----CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYS-----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
... .......||..|+|||++.. ...+.++|||||||++|||++|+.||......+ |.......
T Consensus 220 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~-- 288 (353)
T PLN00034 220 QTM----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-----WASLMCAI-- 288 (353)
T ss_pred ccc----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHH--
Confidence 221 11223578999999998743 234568999999999999999999997332211 11111000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
. ...........+.++.+++.+||+.||++|||++|+++.
T Consensus 289 ------~---~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 289 ------C---MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------h---ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000111122345678999999999999999999999875
No 96
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7e-35 Score=329.75 Aligned_cols=262 Identities=26% Similarity=0.423 Sum_probs=206.5
Q ss_pred cCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.+|.+.+.||+|+||.||+|... +++.||||++.........+.+.+|++++++++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--DP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--CC
Confidence 35777789999999999999653 34789999997665555668899999999999999999999988654 45
Q ss_pred eeEEEeecCCCChHHhhhcCCCC-------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVN-------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~-------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
.++||||+++|+|.++++..... ......+++.++..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 79999999999999999764321 12235688999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHH
Q 000859 1093 EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1093 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1171 (1251)
.+||+|||.++........ .......+++.|+|||++.+..++.++||||+||++|||++ |+.||......+
T Consensus 160 ~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~----- 232 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE----- 232 (280)
T ss_pred eEEECCcccceecccCcce--ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----
Confidence 9999999999764322111 11122346788999999999999999999999999999999 999986543221
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
..+.. ..... . ..+...+..+.+++.+||+.||++||+++||++.|++
T Consensus 233 ~~~~~-----------~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 233 VIECI-----------TQGRL-L--QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHH-----------HcCCc-C--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11110 00000 1 1112345678999999999999999999999998863
No 97
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.8e-35 Score=327.89 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=203.8
Q ss_pred cCCCcCceecccCCceEEEEEec-CCc----EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGA----TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||+||+|.+. +++ .||+|++..........++..|+.++++++||||++++|++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Ccc
Confidence 35778889999999999999764 344 4788887644444445678888999999999999999998742 335
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++++||+++|+|.+++... ...+++..+..++.||+.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 84 ~~i~e~~~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQH------RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred EEEEEeCCCCcHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCc
Confidence 7899999999999999764 34689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
.++........ .......++..|+|||.+.+..++.++|||||||++||+++ |+.||.+...... .+..
T Consensus 155 ~~~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~--~~~~------ 224 (279)
T cd05111 155 VADLLYPDDKK--YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV--PDLL------ 224 (279)
T ss_pred cceeccCCCcc--cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--HHHH------
Confidence 99765432111 11223456788999999998899999999999999999998 9999976532211 1111
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
.... ..+.+..++.++.+++.+||..||++|||++|+++.+..+.+..
T Consensus 225 ---------~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 225 ---------EKGE--RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred ---------HCCC--cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0000 01111123456788999999999999999999999998877644
No 98
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1e-34 Score=324.90 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=203.2
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.+|+..+.||+|+||.||+|.. ++++.||+|++... ....+.+.+|++++++++||||+++++++... ...+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcCC--CCcEEEE
Confidence 3477788999999999999954 45889999998643 23356788999999999999999999988654 4468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.... ...+++..++.++.|+++|++|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 82 e~~~~~~L~~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~ 153 (263)
T cd05052 82 EFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 153 (263)
T ss_pred EeCCCCcHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccc
Confidence 9999999999997642 35689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+ ......
T Consensus 154 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~------ 219 (263)
T cd05052 154 MTGDTYT---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLE------ 219 (263)
T ss_pred cccceee---ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHH------
Confidence 5432111 1111234678999999998899999999999999999998 999987542211 111110
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
..... +.+...+.++.+++.+||+.||++||+++++.+.|++++
T Consensus 220 ------~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 220 ------KGYRM--ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred ------CCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 00111 112234567899999999999999999999999998764
No 99
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1e-34 Score=324.54 Aligned_cols=256 Identities=27% Similarity=0.441 Sum_probs=204.3
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.++|+..+.||+|+||.||+|...+++.||+|.++... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE--EPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEecC--CCeeeee
Confidence 45688889999999999999987778899999986433 2346788999999999999999999987544 4469999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 81 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-----GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred ecccCCcHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence 9999999999997642 35689999999999999999999999 999999999999999999999999999987
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
....... .......+..|+|||++.+..++.++||||||+++|||++ |+.||.+...... ...
T Consensus 153 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~--~~~----------- 216 (261)
T cd05068 153 IKEDIYE---AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV--LQQ----------- 216 (261)
T ss_pred ccCCccc---ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHH-----------
Confidence 6422111 1111223468999999998899999999999999999999 9999975422110 000
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
+.... ..+.+...+..+.+++.+|++.+|++||+++++++.|+++
T Consensus 217 ----~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 217 ----VDQGY--RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----HHcCC--CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 00000 0112223456789999999999999999999999999863
No 100
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=328.00 Aligned_cols=246 Identities=30% Similarity=0.419 Sum_probs=199.6
Q ss_pred CCcCceecccCCceEEEE-EecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|...+.||.|+||.||-| +.++.+.||||++.-.. ......++.+|+.++++++|||+|.+-|+|..+ ...|+||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre--~TaWLVM 105 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE--HTAWLVM 105 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc--chHHHHH
Confidence 556678999999999999 56678999999996443 444557899999999999999999999987654 4469999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|||- |+-.|.+.-+ .+++.+.++..|+.+.+.|++|||+. +.||||||+.|||+++.|.||++|||.|..
T Consensus 106 EYCl-GSAsDlleVh------kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi 175 (948)
T KOG0577|consen 106 EYCL-GSASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASI 175 (948)
T ss_pred HHHh-ccHHHHHHHH------hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhh
Confidence 9995 5788877654 46788999999999999999999999 999999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
.. +...++|||.|||||++. .+.|+.++||||+|++..|+...++|+..+.... ..
T Consensus 176 ~~--------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS--AL----------- 234 (948)
T KOG0577|consen 176 MA--------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--AL----------- 234 (948)
T ss_pred cC--------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH--HH-----------
Confidence 42 234479999999999875 5679999999999999999999999986552211 00
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
..+. ..-.|.++ ...++..+.+++..|+++-|.+|||.+++++.-
T Consensus 235 ---YHIA-QNesPtLq-s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 235 ---YHIA-QNESPTLQ-SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred ---HHHH-hcCCCCCC-CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 0111 11112232 334677899999999999999999999988753
No 101
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.2e-35 Score=338.19 Aligned_cols=269 Identities=26% Similarity=0.403 Sum_probs=206.6
Q ss_pred hcCCCcCceecccCCceEEEEEe------cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL------ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 1017 (1251)
.++|+..+.||+|+||.||+|.. .+++.||||+++..........+.+|+++++++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG- 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-
Confidence 34688999999999999999953 356889999997655444556788999999999 6899999999876543
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCc------------------------------------------------------
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNI------------------------------------------------------ 1043 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------------------------ 1043 (1251)
...++||||+++|+|.+++.......
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 35689999999999999987532100
Q ss_pred ------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccc
Q 000859 1044 ------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNT 1117 (1251)
Q Consensus 1044 ------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 1117 (1251)
.....+++..+.+++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++........ ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~ 239 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKG 239 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch--hhcC
Confidence 0113478899999999999999999999 9999999999999999999999999999765322111 1111
Q ss_pred eeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCC
Q 000859 1118 WFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLL 1196 (1251)
Q Consensus 1118 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1196 (1251)
...++..|+|||.+.+..++.++||||||+++|||++ |..||......+. .. ... ........
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~---~~~------------~~~~~~~~ 303 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC---RRL------------KEGTRMRA 303 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HH---HHH------------hccCCCCC
Confidence 1245678999999988899999999999999999997 9999875432211 00 000 00000111
Q ss_pred CchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1197 PGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1197 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
+...++++.+++.+||+.||++|||+.||++.|+.+++.
T Consensus 304 --~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 304 --PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred --CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 112345688999999999999999999999999998865
No 102
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=5.1e-35 Score=343.68 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=197.9
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|+..+.||+|+||+||+|+. .+++.||||++.... .....+.+.+|+++++.++||||+++++++.. +...++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD--ENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCeEEE
Confidence 3688899999999999999965 468999999996432 22334567889999999999999999998854 456799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 148 (364)
T cd05599 79 IMEYLPGGDMMTLLMKK-------DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLC 148 (364)
T ss_pred EECCCCCcHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccc
Confidence 99999999999999763 4689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCC----------------------------------cccceeecccceecccccccCCCCCccceeehhHH
Q 000859 1103 KALVEDYNSNT----------------------------------ESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIV 1148 (1251)
Q Consensus 1103 ~~~~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~ 1148 (1251)
+.+........ .......||+.|+|||++.+..++.++||||+||+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i 228 (364)
T cd05599 149 TGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVI 228 (364)
T ss_pred eeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhH
Confidence 76432111000 00011368999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC---HH
Q 000859 1149 LMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS---SR 1225 (1251)
Q Consensus 1149 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ 1225 (1251)
+|||++|+.||.+....+. .... .........+.....++++.+++.+|+. +|.+|++ ++
T Consensus 229 l~el~~G~~Pf~~~~~~~~-----~~~i-----------~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 229 MYEMLVGYPPFCSDNPQET-----YRKI-----------INWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred HHHhhcCCCCCCCCCHHHH-----HHHH-----------HcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 9999999999976532211 0000 0000001111111234567899999996 9999998 88
Q ss_pred HHHHH
Q 000859 1226 QVCDL 1230 (1251)
Q Consensus 1226 eil~~ 1230 (1251)
|+++.
T Consensus 292 ~ll~h 296 (364)
T cd05599 292 EIKSH 296 (364)
T ss_pred HHhcC
Confidence 87663
No 103
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.3e-35 Score=330.45 Aligned_cols=267 Identities=24% Similarity=0.333 Sum_probs=196.2
Q ss_pred CCCcCceecccCCceEEEEEe--cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhc---cCCCccceeceeeec---CC
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL--ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRI---RHRHLVKLMGHCCNK---GA 1017 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~---~~ 1017 (1251)
+|+..+.||+|+||+||+|+. .+++.||||++..... ......+.+|+++++.+ +||||++++++|... ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688889999999999999965 3468899999865432 22234566788877766 699999999987532 23
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++||||++ ++|.+++.... ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP-----EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 45789999996 69999997643 34589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
|||+++..... .......||..|+|||.+.+..++.++||||+||++|||++|++||.+....+. ...+....
T Consensus 153 Dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~--~~~i~~~~ 225 (290)
T cd07862 153 DFGLARIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVI 225 (290)
T ss_pred cccceEeccCC-----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHHh
Confidence 99999765322 122235689999999999888999999999999999999999999986533221 11111111
Q ss_pred hccc--hhhhh--hhcccCCCCCC--ch---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1178 EMSG--SAREE--LLDDQMKPLLP--GE---ECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1178 ~~~~--~~~~~--~~~~~~~~~~~--~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.... .+... .......+... .. ...+..+.+++.+|++.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 226 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 00000 00000000000 00 113456789999999999999999999985
No 104
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.8e-35 Score=338.02 Aligned_cols=253 Identities=23% Similarity=0.316 Sum_probs=195.2
Q ss_pred CCCcCceecccCCceEEEEEe----cCCcEEEEEEeccCC---chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCC
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL----ANGATVAVKKISCKD---DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 1018 (1251)
+|+..+.||+|+||.||+++. .+++.||+|++.... .....+.+.+|+++++++ +||+|+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT--EA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec--CC
Confidence 477888999999999999864 357899999986432 222345678899999999 59999999987744 44
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~D 148 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQ-------RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTD 148 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEee
Confidence 57899999999999999976 35689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||+++.+..... .......||..|+|||++.+. .++.++||||+||++|||++|+.||......... .....
T Consensus 149 fG~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~~~~--- 221 (332)
T cd05614 149 FGLSKEFLSEEK---ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ-SEVSR--- 221 (332)
T ss_pred CcCCccccccCC---CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH-HHHHH---
Confidence 999976532211 112235789999999998765 4788999999999999999999999654222111 00000
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
.... ..+. .+...+..+.+++.+|++.||++|| +++++++.
T Consensus 222 --------~~~~--~~~~--~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 222 --------RILK--CDPP--FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred --------HHhc--CCCC--CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 0000 0011 1122456688999999999999999 67777654
No 105
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.8e-35 Score=338.66 Aligned_cols=243 Identities=21% Similarity=0.305 Sum_probs=192.4
Q ss_pred ceecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 952 FIIGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
+.||+|+||.||+|. ..+|+.||+|++.... .......+..|+++++.++||||+++++++.. ....++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEEEeCCC
Confidence 369999999999995 4578999999996432 22234567789999999999999999987754 345799999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
+|+|.+++.. ...+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~L~~~l~~-------~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 79 GGELFFHLSR-------ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred CCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence 9999998876 3468999999999999999999997 6 999999999999999999999999999865322
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~-----~~~i----------- 208 (325)
T cd05594 149 D----GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-----FELI----------- 208 (325)
T ss_pred C----CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH-----HHHH-----------
Confidence 1 1112235689999999999999999999999999999999999999965422111 0000
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
.. .....+...++++.+++.+|++.||++|+ +++++++.
T Consensus 209 ~~----~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 209 LM----EEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred hc----CCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00 00011122345688999999999999996 89998754
No 106
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.4e-35 Score=341.44 Aligned_cols=206 Identities=25% Similarity=0.343 Sum_probs=172.6
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|+..+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|+.++++++||+|+++++.+.+ ....++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD--KLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCeEEE
Confidence 3688889999999999999954 468999999996432 22234567889999999999999999998754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.+ .+.+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~E~~~gg~L~~~l~~-------~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla 148 (363)
T cd05628 79 IMEFLPGGDMMTLLMK-------KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLC 148 (363)
T ss_pred EEcCCCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCc
Confidence 9999999999999976 35689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCC-------------------------------CcccceeecccceecccccccCCCCCccceeehhHHHHH
Q 000859 1103 KALVEDYNSN-------------------------------TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLME 1151 (1251)
Q Consensus 1103 ~~~~~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~e 1151 (1251)
+.+....... ........||+.|+|||++.+..++.++||||+||++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~e 228 (363)
T cd05628 149 TGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (363)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHH
Confidence 7643211000 000123579999999999999999999999999999999
Q ss_pred HhhCCCCCCCcc
Q 000859 1152 LVSGKMPTDATF 1163 (1251)
Q Consensus 1152 l~tg~~p~~~~~ 1163 (1251)
|++|+.||.+..
T Consensus 229 ll~G~~Pf~~~~ 240 (363)
T cd05628 229 MLIGYPPFCSET 240 (363)
T ss_pred HHhCCCCCCCCC
Confidence 999999997653
No 107
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8e-35 Score=328.51 Aligned_cols=264 Identities=21% Similarity=0.357 Sum_probs=203.6
Q ss_pred hhcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
..++|+..+.||+|+||.||+|... ++..||||++...........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-- 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-- 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4567899999999999999999643 34679999986544444556788999999999999999999987543
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcc---cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCe
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIK---MRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEA 1094 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 1094 (1251)
...++||||+++|+|.++++....... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 456899999999999999975332111 123568889999999999999999998 99999999999999999999
Q ss_pred EEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHH
Q 000859 1095 HLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWV 1173 (1251)
Q Consensus 1095 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~ 1173 (1251)
|++|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~-----~~ 231 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ-----VL 231 (277)
T ss_pred EECCCCCccccCCcceeec--CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HH
Confidence 9999999876533221111 111245788999999998899999999999999999999 788986542211 11
Q ss_pred HHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1174 EMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
+... .... .+.+...+..+.+++.+|++.||++|||+.|+++.+++
T Consensus 232 ~~~~-----------~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RFVM-----------EGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHH-----------cCCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1100 0000 01112244578999999999999999999999998763
No 108
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.5e-34 Score=323.67 Aligned_cols=256 Identities=25% Similarity=0.417 Sum_probs=196.9
Q ss_pred ceecccCCceEEEEEec----CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELA----NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|... ++..||+|.+.........+.+.+|+.+++.++||||+++++++... +...++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEecC
Confidence 36899999999999653 24579999986544445567888999999999999999999977543 33468999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
.+|+|.+++.+. ....++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 80 ~~~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~ 150 (262)
T cd05058 80 KHGDLRNFIRSE------THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYD 150 (262)
T ss_pred CCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccC
Confidence 999999999764 23467788899999999999999999 999999999999999999999999999976533
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhC-CCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSG-KMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
.............++..|+|||.+.+..++.++|||||||++|||++| .+||......+ .....
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-----~~~~~---------- 215 (262)
T cd05058 151 KEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-----ITVYL---------- 215 (262)
T ss_pred CcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHH----------
Confidence 211111111223457789999999888999999999999999999995 56665432111 11100
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
... ...+.+...+..+.+++.+||+.+|++||++.|+++.+++++.
T Consensus 216 -~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 216 -LQG---RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -hcC---CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 000 0111122234578899999999999999999999999998864
No 109
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-34 Score=322.77 Aligned_cols=250 Identities=28% Similarity=0.399 Sum_probs=197.9
Q ss_pred eecccCCceEEEEEe---cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 953 IIGSGGSGTVYKAEL---ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
.||+|+||.||+|.+ .++..||+|++.... .....+.+.+|+.+++.++||||++++|++.. ...++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecCC
Confidence 589999999999964 357889999986443 23345788999999999999999999998742 34589999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 1108 (1251)
+|+|.+++.. ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++.....
T Consensus 79 ~~~L~~~l~~-------~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~ 148 (257)
T cd05116 79 LGPLNKFLQK-------NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD 148 (257)
T ss_pred CCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence 9999999975 34688999999999999999999999 9999999999999999999999999999765432
Q ss_pred cCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1109 YNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1109 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
.... .......++..|+|||.+....++.++|||||||++|||++ |+.||.+....+ .. ...
T Consensus 149 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~---~~i----------- 211 (257)
T cd05116 149 ENYY-KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--VT---QMI----------- 211 (257)
T ss_pred CCee-eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---HHH-----------
Confidence 2111 11112234678999999988889999999999999999998 999997653211 11 111
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
.....+. .+...+.++.++|.+||+.||++||++++|.+.|++++
T Consensus 212 -~~~~~~~--~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05116 212 -ESGERME--CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY 256 (257)
T ss_pred -HCCCCCC--CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence 1111111 12234567899999999999999999999999999875
No 110
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.7e-34 Score=322.71 Aligned_cols=256 Identities=26% Similarity=0.431 Sum_probs=204.3
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
..+|+..++||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++.+ ...++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEECC---CCcEEEE
Confidence 345888899999999999999877777899999864332 34678999999999999999999987632 3468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.+.. ...++++.+..++.|+++|++|+|+. +|+||||||+||++++++.+||+|||.++.
T Consensus 80 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~ 151 (262)
T cd05071 80 EYMSKGSLLDFLKGEM-----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 151 (262)
T ss_pred EcCCCCcHHHHHhhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceee
Confidence 9999999999997632 34678999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
+...... ......++..|+|||+..+..++.++|||||||++||++| |+.||.+....+. ....
T Consensus 152 ~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-----~~~~------- 216 (262)
T cd05071 152 IEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQV------- 216 (262)
T ss_pred ccccccc---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-----HHHH-------
Confidence 5332111 1112346778999999988899999999999999999999 8889875532111 0000
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
.. .. ..+.....+..+.+++.+|++.||++||+++++.+.|++++
T Consensus 217 ----~~-~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 217 ----ER-GY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred ----hc-CC--CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 00 00 11112335567899999999999999999999999999876
No 111
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.5e-35 Score=326.27 Aligned_cols=257 Identities=29% Similarity=0.480 Sum_probs=206.7
Q ss_pred hhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
...+|+..+.||.|+||.||+|...+++.||+|++..... .....+.+|+.+++.++||||+++++++... ...++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVG--EPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecC--CCeEEE
Confidence 3456888889999999999999887799999999865433 2456788999999999999999999988554 446899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.++++... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+.
T Consensus 81 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 81 TELMEKGSLLAFLRSPE-----GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred EeecccCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchh
Confidence 99999999999997643 45689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
......... ....++..|+|||...+..++.++||||||+++|+|++ |+.||......+. ....
T Consensus 153 ~~~~~~~~~----~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~--~~~~--------- 217 (261)
T cd05148 153 LIKEDVYLS----SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV--YDQI--------- 217 (261)
T ss_pred hcCCccccc----cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH--HHHH---------
Confidence 653321111 12345778999999988899999999999999999998 8999975532111 1110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.. .. ..+.+...+.++.+++.+||+.||++|||++++.+.|+.+
T Consensus 218 -----~~-~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 218 -----TA-GY--RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----Hh-CC--cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 00 00 1112233456788999999999999999999999999864
No 112
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.4e-35 Score=341.97 Aligned_cols=256 Identities=22% Similarity=0.304 Sum_probs=201.6
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|...+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|+++++.++||||+++++++.+ ....++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD--EEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec--CCeEEE
Confidence 36888899999999999999654 78999999996432 12344678899999999999999999988754 445799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.+. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~ 148 (350)
T cd05573 79 VMEYMPGGDLMNLLIRK-------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLC 148 (350)
T ss_pred EEcCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCC
Confidence 99999999999999763 4689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccC-------------------------CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCC
Q 000859 1103 KALVEDYN-------------------------SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKM 1157 (1251)
Q Consensus 1103 ~~~~~~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~ 1157 (1251)
+....... ..........||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~ 228 (350)
T cd05573 149 KKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228 (350)
T ss_pred ccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCC
Confidence 76543220 00011223578999999999999999999999999999999999999
Q ss_pred CCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 000859 1158 PTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-SRQVCDL 1230 (1251)
Q Consensus 1158 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~~ 1230 (1251)
||......+. ..... .+... ...+.....++++.+++.+|++ ||.+||+ ++++++.
T Consensus 229 Pf~~~~~~~~-----~~~i~--------~~~~~---~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 229 PFYSDTLQET-----YNKII--------NWKES---LRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCCHHHH-----HHHHh--------ccCCc---ccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 9976532111 00000 00000 0111111145678899999997 9999999 9999875
No 113
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-34 Score=328.49 Aligned_cols=275 Identities=24% Similarity=0.400 Sum_probs=206.8
Q ss_pred CCCcCceecccCCceEEEEEe-----cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-----ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.|.+.+.||+|+||.||+|++ .++..||+|.+.........+.+.+|+++++.++||||+++++++...+....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467788999999999999964 357889999987655555567899999999999999999999988766556679
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++++|.+++.+. ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 85 lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN------KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred EEEEccCCCCHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcc
Confidence 999999999999999753 23589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
++.+...... ........++..|+|||++.+..++.++|||||||++||+++++.|+............ ........
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~--~~~~~~~~ 232 (284)
T cd05079 156 TKAIETDKEY-YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIG--PTHGQMTV 232 (284)
T ss_pred ccccccCccc-eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcc--cccccccH
Confidence 9865432211 11112245677899999998888999999999999999999987765322110000000 00000000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
.......... ...+.+...+.++.+++.+|++.+|++|||++++++.+++++
T Consensus 233 ~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 233 TRLVRVLEEG--KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred HHHHHHHHcC--ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 0000001110 011122235567999999999999999999999999998763
No 114
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.4e-35 Score=341.52 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=206.8
Q ss_pred hhcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~ 1016 (1251)
...+|...+.||+|+||.||+|.++ .+..||||++.........+.+.+|+++++++. |||||+++|+|...
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~- 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG- 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC-
Confidence 3445777889999999999999753 346899999976554445567889999999997 99999999988654
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCCc-----------------------------------------------------
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVNI----------------------------------------------------- 1043 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~~----------------------------------------------------- 1043 (1251)
...++||||+++|+|.+++++.....
T Consensus 114 -~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 114 -GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred -CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 35699999999999999997643100
Q ss_pred --------------------------------------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 000859 1044 --------------------------------------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSN 1085 (1251)
Q Consensus 1044 --------------------------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 1085 (1251)
.....+++..+.+++.|++.|++|||+. +|+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcce
Confidence 1123578888999999999999999998 99999999999
Q ss_pred eeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccc
Q 000859 1086 ILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFG 1164 (1251)
Q Consensus 1086 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~ 1164 (1251)
|++++++.+|++|||+++.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNY--ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEEeCCCEEEEEecCcceeccccccc--ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 99999999999999999765332111 11122356789999999988889999999999999999998 8999865422
Q ss_pred cchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1165 VEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
.+. .. ..+....+. +.+...+.++.+++.+||+.+|.+||+++||++.|++++
T Consensus 348 ~~~-~~---------------~~~~~~~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NEQ-FY---------------NAIKRGYRM--AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hHH-HH---------------HHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111 00 000001111 112224567999999999999999999999999999875
No 115
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.9e-34 Score=320.57 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=196.7
Q ss_pred eecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCC
Q 000859 953 IIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGS 1031 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gs 1031 (1251)
.||+|+||.||+|.. .+++.||+|.+...........+.+|++++++++||||+++++++... ...++||||+++++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~ 79 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVMELVQGGD 79 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCeEEEEeeccCCc
Confidence 699999999999965 478999999987555555667899999999999999999999988654 45699999999999
Q ss_pred hHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCC
Q 000859 1032 VWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNS 1111 (1251)
Q Consensus 1032 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 1111 (1251)
|.+++... ...+++.+++.++.|+++|++|||+. +|+||||||+||+++.++.+|++|||.++........
T Consensus 80 L~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 80 FLTFLRTE------GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred HHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc
Confidence 99999753 24578999999999999999999999 9999999999999999999999999998754321111
Q ss_pred CCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1112 NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1112 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......++..|+|||.+.+..++.++||||+||++|||++ |..||......+. .. .+..
T Consensus 151 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~--~~---------------~~~~ 211 (252)
T cd05084 151 --STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT--RE---------------AIEQ 211 (252)
T ss_pred --ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH--HH---------------HHHc
Confidence 01111233567999999998889999999999999999998 9999865422110 00 0001
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.... +.+...+..+.+++.+|++.+|++|||++++.+.|.
T Consensus 212 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 212 GVRL--PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCC--CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1111 122234567899999999999999999999999875
No 116
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.8e-34 Score=325.94 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=206.8
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCc----EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGA----TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
..+|+..++||+|+||+||+|.+. +++ .||+|++.........+.+.+|+.+++.++||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---T 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---C
Confidence 346888899999999999999653 444 48999997666665667889999999999999999999988532 3
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++++||+++|+|.++++.. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~df 153 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN------KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDF 153 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCC
Confidence 57999999999999999764 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|+++.+...... .......++..|+|||...+..++.++|||||||++||+++ |..||....... ...+..
T Consensus 154 G~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~---- 225 (279)
T cd05109 154 GLARLLDIDETE--YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLLE---- 225 (279)
T ss_pred Cceeecccccce--eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH----
Confidence 999765322111 11111234678999999998899999999999999999998 999987542211 111111
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
... ..+.+...+.++.+++.+||+.||++||++.++++.+.++...+
T Consensus 226 -----------~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 226 -----------KGE--RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -----------CCC--cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 000 11112234567889999999999999999999999998886654
No 117
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.8e-35 Score=336.24 Aligned_cols=266 Identities=25% Similarity=0.407 Sum_probs=202.7
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.++|+..+.||+|+||.||+|... ++..||+|++.........+.+.+|++++++++||||++++++|... ...++|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC--CEEEEE
Confidence 357889999999999999999654 68899999987655555567899999999999999999999998764 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.++++.. +.+++..+..++.|++.|++|||+.+ +|+||||||+||++++++.+||+|||++.
T Consensus 82 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~ 152 (333)
T cd06650 82 MEHMDGGSLDQVLKKA-------GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (333)
T ss_pred EecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcch
Confidence 9999999999999763 45788999999999999999999741 79999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc---
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS--- 1180 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--- 1180 (1251)
.+... ......|+..|+|||++.+..++.++||||+||++|||++|+.||......+.. ..........
T Consensus 153 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~ 224 (333)
T cd06650 153 QLIDS------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE--LMFGCPVEGDPAE 224 (333)
T ss_pred hhhhh------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH--HHhcCcccCCccc
Confidence 55321 112346899999999999888999999999999999999999999754322111 0000000000
Q ss_pred ----------ch----------------hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1181 ----------GS----------------AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1181 ----------~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. .....+.....+..+ ....+.++.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 225 SETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLP-SGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCC-CCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00 000000000001111 01134568899999999999999999999754
No 118
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-34 Score=327.14 Aligned_cols=262 Identities=23% Similarity=0.401 Sum_probs=203.7
Q ss_pred cCCCcCceecccCCceEEEEEe-----cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-----ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.. .++..||+|.+.........+.+.+|++++++++||||+++++++... ...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE--QPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--Cce
Confidence 3477788999999999999964 246789999997555554557888999999999999999999987554 446
Q ss_pred eEEEeecCCCChHHhhhcCCCCc----------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNI----------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
++||||+++|+|.+++....... .....+++.++..++.|++.|++|||++ +|+||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 99999999999999986432110 1123578999999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhH
Q 000859 1091 NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDM 1169 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~ 1169 (1251)
++.+|++|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... ..
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~ 235 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYY--RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EV 235 (283)
T ss_pred CCcEEeccccccccccCCcce--ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 999999999999765332111 11122345778999999988889999999999999999999 99998654221 11
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
...+. . ....+.+..++.++.+++.+||+.||++||++.+|.+.+..
T Consensus 236 ~~~~~--------------~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IEMVR--------------K---RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHH--------------c---CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11110 0 01112223345678999999999999999999999998864
No 119
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2e-34 Score=326.69 Aligned_cols=273 Identities=29% Similarity=0.415 Sum_probs=204.5
Q ss_pred cCCCcCceecccCCceEEEEEe-----cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-----ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 4678888999999999999964 357899999986443 3345678999999999999999999998766555567
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++||||+++|+|.+++.+. ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||
T Consensus 83 ~lv~e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKH------RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred EEEEEecCCCCHHHHHHhc------CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCc
Confidence 9999999999999999753 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh--
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME-- 1178 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 1178 (1251)
+++......... .......++..|+|||...+..++.++|||||||++|||++|..|+...... ..........
T Consensus 154 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (284)
T cd05081 154 LTKVLPQDKEYY-KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQ 229 (284)
T ss_pred ccccccCCCcce-eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccc
Confidence 998654322111 1111123445699999998888999999999999999999988775432110 0000000000
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.......+..... ...+.....+.++.+++.+||+.+|++|||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 230 MIVYHLIELLKNN--GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cchHHHHHHHhcC--CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000000111111 11122233456799999999999999999999999999875
No 120
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.1e-35 Score=335.78 Aligned_cols=237 Identities=24% Similarity=0.338 Sum_probs=188.0
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|.. .+++.||||++.... .....+.+..|..+++.. +||||+++++++.. ....++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~--~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT--PDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc--CCEEEEEEcCC
Confidence 3699999999999965 468899999986432 223345677888888877 69999999998754 45579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~g~L~~~i~~~-------~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~ 148 (320)
T cd05590 79 NGGDLMFHIQKS-------RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF 148 (320)
T ss_pred CCchHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence 999999998763 4689999999999999999999999 999999999999999999999999999865321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ..+..
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-----~~~~i----------- 208 (320)
T cd05590 149 N----GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-----LFEAI----------- 208 (320)
T ss_pred C----CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-----HHHHH-----------
Confidence 1 112223578999999999999899999999999999999999999997543211 11111
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS 1224 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1224 (1251)
.. .....+...+.++.+++.+|++.||++||++
T Consensus 209 ~~----~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 209 LN----DEVVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred hc----CCCCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 00 0011112245568899999999999999998
No 121
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.8e-35 Score=342.89 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=195.9
Q ss_pred cCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|.+.+.||+|+||+||+|+ ..+++.||||++.... .....+.+.+|++++++++|||||++++++.+ +...++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD--AQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCeeEE
Confidence 368888999999999999995 4578999999986432 22334677889999999999999999998854 446799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.. .+.+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~E~~~gg~L~~~l~~-------~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla 148 (377)
T cd05629 79 IMEFLPGGDLMTMLIK-------YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLS 148 (377)
T ss_pred EEeCCCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999975 34688999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCC-----------C--------------------------------cccceeecccceecccccccCCCCCc
Q 000859 1103 KALVEDYNSN-----------T--------------------------------ESNTWFAGSYGYIAPEYAYSLKATEK 1139 (1251)
Q Consensus 1103 ~~~~~~~~~~-----------~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 1139 (1251)
+.+....... . .......||+.|+|||++.+..++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 228 (377)
T cd05629 149 TGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE 228 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCc
Confidence 6432110000 0 00012469999999999999899999
Q ss_pred cceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCC
Q 000859 1140 CDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQ 1219 (1251)
Q Consensus 1140 sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 1219 (1251)
+||||+||++|||++|+.||.+....+. ...... +.. ...++.....+.++.+++.+|+. +|.
T Consensus 229 ~DiwSlGvil~elltG~~Pf~~~~~~~~-----~~~i~~--------~~~---~~~~p~~~~~s~~~~dli~~lL~-~~~ 291 (377)
T cd05629 229 CDWWSLGAIMFECLIGWPPFCSENSHET-----YRKIIN--------WRE---TLYFPDDIHLSVEAEDLIRRLIT-NAE 291 (377)
T ss_pred eeeEecchhhhhhhcCCCCCCCCCHHHH-----HHHHHc--------cCC---ccCCCCCCCCCHHHHHHHHHHhc-CHh
Confidence 9999999999999999999975533211 000000 000 01112222234568899999997 677
Q ss_pred CC---CCHHHHHHH
Q 000859 1220 ER---PSSRQVCDL 1230 (1251)
Q Consensus 1220 ~R---Ps~~eil~~ 1230 (1251)
+| ++++|++..
T Consensus 292 ~r~~r~~~~~~l~h 305 (377)
T cd05629 292 NRLGRGGAHEIKSH 305 (377)
T ss_pred hcCCCCCHHHHhcC
Confidence 65 599998775
No 122
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.2e-34 Score=334.74 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=192.2
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|..+++++ +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~--~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT--ESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc--CCEEEEEEeCC
Confidence 3699999999999955 468899999997532 223345678899999998 79999999998754 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.. .+.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~g~L~~~~~~-------~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 148 (329)
T cd05588 79 SGGDLMFHMQR-------QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR 148 (329)
T ss_pred CCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence 99999998865 35689999999999999999999999 999999999999999999999999999864321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccc---hhHHHHHHHHHhccchhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVE---MDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~ 1184 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+ ....++...
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~--------- 215 (329)
T cd05588 149 P----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ--------- 215 (329)
T ss_pred C----CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH---------
Confidence 1 112223578999999999999999999999999999999999999997432211 111111111
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC------HHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS------SRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~eil~ 1229 (1251)
..... ....+...+.++.+++.+|++.||.+||+ ++++++
T Consensus 216 -~~~~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 216 -VILEK----QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred -HHHcC----CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 01111 11111223456889999999999999998 566654
No 123
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.2e-35 Score=335.26 Aligned_cols=243 Identities=23% Similarity=0.325 Sum_probs=191.6
Q ss_pred ceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|+.. +++.||||++.... .....+.+..|.++++.+ +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEEEEeCC
Confidence 36999999999999654 57899999986432 223345677899998876 79999999998854 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|..++.. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~ 148 (321)
T cd05591 79 NGGDLMFQIQR-------SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL 148 (321)
T ss_pred CCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999876 34688999999999999999999999 999999999999999999999999999875322
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+. .+..
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~-----~~~i----------- 208 (321)
T cd05591 149 N----GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL-----FESI----------- 208 (321)
T ss_pred C----CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH-----HHHH-----------
Confidence 1 1122235689999999999998999999999999999999999999976532111 1110
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-------SSRQVCDL 1230 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~eil~~ 1230 (1251)
... ....+...+.++.+++.+|++.||++|| +++++++.
T Consensus 209 ~~~----~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 209 LHD----DVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HcC----CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 000 0011112345688999999999999999 77777654
No 124
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.1e-34 Score=327.47 Aligned_cols=265 Identities=25% Similarity=0.385 Sum_probs=206.5
Q ss_pred CCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+|...+.||+|+||.||+|... ....||+|.+.........+.+.+|+.+++.++||||+++++.+... ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD--GPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CCc
Confidence 3677789999999999999643 23579999887655555567899999999999999999999988654 346
Q ss_pred eEEEeecCCCChHHhhhcCCCC-----------------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVN-----------------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKS 1083 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~-----------------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 1083 (1251)
++++||+++|+|.+++...... ......+++.++..++.|++.|++|||+. +|+||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 8999999999999998753211 11234688999999999999999999999 999999999
Q ss_pred CCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCc
Q 000859 1084 SNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDAT 1162 (1251)
Q Consensus 1084 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~ 1162 (1251)
+||++++++.+||+|||+++......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYV--KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchh--cccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999997653321111 1122345678999999988889999999999999999999 99999754
Q ss_pred cccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1163 FGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.+.+ ...+. ...... +.+...+.++.+++.+|++.+|++||+++++++.|++++.+
T Consensus 234 ~~~~--~~~~~---------------~~~~~~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 234 APER--LFNLL---------------KTGYRM--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CHHH--HHHHH---------------hCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 3211 11111 011111 11223456788999999999999999999999999998765
No 125
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.3e-35 Score=333.61 Aligned_cols=242 Identities=23% Similarity=0.337 Sum_probs=188.4
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|+. .+++.||||+++... .....+.+..|..++... +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 3699999999999965 457899999986432 122334556677777655 89999999988754 44679999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~gg~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~ 148 (316)
T cd05592 79 NGGDLMFHIQSS-------GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN 148 (316)
T ss_pred CCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCC
Confidence 999999998763 4689999999999999999999999 999999999999999999999999999975422
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ .....
T Consensus 149 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-----~~~~i----------- 208 (316)
T cd05592 149 GE----GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-----LFDSI----------- 208 (316)
T ss_pred CC----CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-----HHHHH-----------
Confidence 11 22233578999999999999899999999999999999999999997643211 11100
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR-QVCD 1229 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil~ 1229 (1251)
.. ..+.. +...+.++.+++.+||+.||++||++. ++.+
T Consensus 209 ~~--~~~~~--~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 209 LN--DRPHF--PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred Hc--CCCCC--CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 00 00111 122445678999999999999999875 4543
No 126
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.5e-35 Score=350.83 Aligned_cols=260 Identities=25% Similarity=0.354 Sum_probs=205.2
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCC---
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG--- 1018 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~--- 1018 (1251)
...+|.+.+.||+|+||+||+|+ ..+|+.||||++.... .......+.+|+.++..++|+||+++++.+......
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 45689999999999999999995 4578999999986543 344556788999999999999999998876543221
Q ss_pred ---ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeE
Q 000859 1019 ---SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAH 1095 (1251)
Q Consensus 1019 ---~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 1095 (1251)
..++||||+++|+|.++++... .....+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~---~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRA---KTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEE
Confidence 2579999999999999997542 1235689999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1096 LGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
|+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....
T Consensus 184 L~DFGls~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-----~~~~~ 256 (496)
T PTZ00283 184 LGDFGFSKMYAATVSD--DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME-----EVMHK 256 (496)
T ss_pred EEecccCeeccccccc--cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH
Confidence 9999999765432111 1122357899999999999999999999999999999999999999754221 11111
Q ss_pred HHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1176 HMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....... +.+...++++.+++.+||+.||++||+++++++.
T Consensus 257 -----------~~~~~~~---~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 -----------TLAGRYD---PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -----------HhcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111 1122345678999999999999999999999764
No 127
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.8e-34 Score=326.22 Aligned_cols=267 Identities=20% Similarity=0.342 Sum_probs=211.1
Q ss_pred hcCCCcCceecccCCceEEEEEecC-----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELAN-----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.++|...+.||+|+||.||+|.... +..||+|++.........+.+.+|+.++++++||||+++++++... +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-GEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CCC
Confidence 4568888999999999999997655 6889999987665666677889999999999999999999987654 345
Q ss_pred eeEEEeecCCCChHHhhhcCCCC-cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVN-IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
.++++||+++|+|.+++...... ......+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 68999999999999999764311 11125689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||+++.+........ .....++..|+|||++.+..++.++|||||||++||+++ |+.||....+.+ ...+..
T Consensus 161 ~g~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~--- 233 (280)
T cd05043 161 NALSRDLFPMDYHCL--GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE--MAAYLK--- 233 (280)
T ss_pred CCCcccccCCceEEe--CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH--HHHHHH---
Confidence 999986543221111 111345678999999988889999999999999999999 999997542211 111111
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
. ... .+....++.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 234 -----------~-~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 -----------D-GYR--LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -----------c-CCC--CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 000 11112245678999999999999999999999999998764
No 128
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.8e-35 Score=338.25 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=198.5
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|...+.||+|+||+||+|.. .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~--~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD--KDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCeEEE
Confidence 3688889999999999999954 478999999997543 22345678899999999999999999987754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a 149 (330)
T cd05601 79 VMEYQPGGDLLSLLNRY------EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSA 149 (330)
T ss_pred EECCCCCCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCC
Confidence 99999999999999764 25689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccc------cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAY------SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
+.+...... ......||+.|+|||++. ...++.++||||+||++|||++|+.||......+ .....
T Consensus 150 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-----~~~~i 221 (330)
T cd05601 150 ARLTANKMV---NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-----TYNNI 221 (330)
T ss_pred eECCCCCce---eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-----HHHHH
Confidence 765322111 112246899999999986 4567899999999999999999999997543211 11110
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
. .......++.....+.++.+++.+|++ +|.+||+++++++.
T Consensus 222 ~-----------~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 222 M-----------NFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred H-----------cCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0 000001112222245668899999998 99999999998753
No 129
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-34 Score=327.61 Aligned_cols=253 Identities=24% Similarity=0.272 Sum_probs=197.5
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.|+..+.||+|+||+||++.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++... ...++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--DALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC--CeEEEE
Confidence 367788999999999999964 4689999999864332 22335677899999999999999999987543 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++
T Consensus 79 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05605 79 LTLMNGGDLKFHIYNMG-----NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred EeccCCCcHHHHHHhcC-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999999999886532 34689999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... ......|+..|+|||++.+..++.++||||+||++|||++|+.||.+..... ....... .
T Consensus 151 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~~-~------- 216 (285)
T cd05605 151 EIPEGE-----TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVER-R------- 216 (285)
T ss_pred ecCCCC-----ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHHH-H-------
Confidence 643211 1122468999999999998899999999999999999999999997542211 1111000 0
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
+.. .....+...+..+.+++.+||+.||++|| +++++++.
T Consensus 217 ----~~~---~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 217 ----VKE---DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ----hhh---cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 000 00111222456788999999999999999 78888654
No 130
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-34 Score=325.46 Aligned_cols=262 Identities=23% Similarity=0.349 Sum_probs=203.6
Q ss_pred hcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 1018 (1251)
+++|...+.||+|+||.||+|... .+..||+|.+...........|.+|+.++++++|+||+++++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-- 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--
Confidence 456888899999999999999664 357899999875555555677999999999999999999999876543
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC---CeE
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM---EAH 1095 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~k 1095 (1251)
..++||||+++|+|.++++...........+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 45899999999999999977543222334689999999999999999999999 999999999999998754 599
Q ss_pred EcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHH
Q 000859 1096 LGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 1174 (1251)
++|||+++.+....... .......+..|+|||++.+..++.++|||||||++|||++ |+.||......+. ..
T Consensus 160 l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-----~~ 232 (277)
T cd05036 160 IADFGMARDIYRASYYR--KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-----ME 232 (277)
T ss_pred eccCccccccCCcccee--cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HH
Confidence 99999998653221111 1111233578999999998899999999999999999997 9999976533211 11
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
... ...+.. .+...+..+.+++.+|++.+|++|||+.+|++.|.
T Consensus 233 ~~~------------~~~~~~--~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 FVT------------GGGRLD--PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHH------------cCCcCC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 100 000011 11223457889999999999999999999999885
No 131
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.5e-34 Score=333.76 Aligned_cols=243 Identities=21% Similarity=0.318 Sum_probs=188.5
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++.++ +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEEEEeCC
Confidence 3699999999999964 467899999997542 233445677899988877 89999999998755 34679999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|..++.. .+.+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~L~~~~~~-------~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~ 148 (329)
T cd05618 79 NGGDLMFHMQR-------QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 148 (329)
T ss_pred CCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccC
Confidence 99999998875 34689999999999999999999999 999999999999999999999999999865321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccch---hHHHHHHHHHhccchhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEM---DMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~ 1184 (1251)
. ........||..|+|||++.+..++.++||||+||++|||++|+.||........ ....+....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------- 216 (329)
T cd05618 149 P----GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------- 216 (329)
T ss_pred C----CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH--------
Confidence 1 1112235789999999999999999999999999999999999999964322111 111111110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS 1224 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1224 (1251)
... .....+...+.++.+++.+|++.||++||++
T Consensus 217 --i~~----~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 217 --ILE----KQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred --Hhc----CCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 011 0111122234568899999999999999984
No 132
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.4e-34 Score=327.65 Aligned_cols=266 Identities=23% Similarity=0.389 Sum_probs=206.8
Q ss_pred hhcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 1016 (1251)
..++|+..+.||+|+||.||+|... ....||+|.+...........+.+|+++++++ +||||+++++++...
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~- 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE- 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC-
Confidence 3456888889999999999999654 23689999987655544556788999999999 899999999988654
Q ss_pred CCceeEEEeecCCCChHHhhhcCCC---------CcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPV---------NIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNIL 1087 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~---------~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 1087 (1251)
...+++|||+++|+|.++++.... .......+++..+++++.|++.|++|||+. +|+||||||+||+
T Consensus 89 -~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 89 -GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred -CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 446999999999999999975321 112345789999999999999999999999 9999999999999
Q ss_pred ecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccc
Q 000859 1088 LDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVE 1166 (1251)
Q Consensus 1088 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~ 1166 (1251)
++.++.+|++|||.++.+....... ......++..|+|||.+.+..++.++|||||||++||+++ |..||......+
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYR--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EcCCCeEEeCcccccccccccccee--ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 9999999999999998654321111 1111234678999999988899999999999999999998 999986542211
Q ss_pred hhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1167 MDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
. .... ...... ..+...+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 243 ~-----~~~~------------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 L-----FKLL------------KEGYRM--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H-----HHHH------------HcCCcC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 0000 000011 111223557889999999999999999999999999875
No 133
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.8e-35 Score=337.73 Aligned_cols=239 Identities=25% Similarity=0.338 Sum_probs=190.1
Q ss_pred ceecccCCceEEEEEe----cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 952 FIIGSGGSGTVYKAEL----ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
+.||+|+||.||+++. .+|+.||+|++.... .......+..|++++++++||||+++++++.. +...++||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEEcC
Confidence 5799999999999854 368899999996433 22234567789999999999999999998854 4567999999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++|+|.+++.+ ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 80 ~~~~~L~~~l~~-------~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 80 LRGGDLFTRLSK-------EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 149 (318)
T ss_pred CCCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence 999999999975 34689999999999999999999999 99999999999999999999999999987543
Q ss_pred cccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ .....
T Consensus 150 ~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-----~~~~i---------- 210 (318)
T cd05582 150 DHE----KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-----TMTMI---------- 210 (318)
T ss_pred CCC----CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-----HHHHH----------
Confidence 221 11223578999999999998889999999999999999999999997542211 11100
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQ 1226 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1226 (1251)
.. .....+...+..+.+++.+||+.||++||++.+
T Consensus 211 -~~----~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 211 -LK----AKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -Hc----CCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00 011112224556889999999999999999655
No 134
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.3e-34 Score=342.13 Aligned_cols=254 Identities=23% Similarity=0.308 Sum_probs=193.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.|+..+.||+|+||+||+|+. .+++.||+|++.... .....+.+.+|++++++++|||||++++++.+ ....++|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CCEEEEE
Confidence 578889999999999999954 568899999986432 22344678899999999999999999998865 3457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.+. +.+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~E~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 80 MDYIPGGDMMSLLIRM-------GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred EeCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 9999999999999763 4578899999999999999999999 99999999999999999999999999986
Q ss_pred ccccccCC-------------------------------------------CCcccceeecccceecccccccCCCCCcc
Q 000859 1104 ALVEDYNS-------------------------------------------NTESNTWFAGSYGYIAPEYAYSLKATEKC 1140 (1251)
Q Consensus 1104 ~~~~~~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~s 1140 (1251)
.+...... .........||+.|+|||++.+..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~ 229 (382)
T cd05625 150 GFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 229 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCee
Confidence 43210000 00001124689999999999999999999
Q ss_pred ceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCC
Q 000859 1141 DVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQE 1220 (1251)
Q Consensus 1141 DiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 1220 (1251)
||||+||++|||++|+.||.+..+.+... ...........+.....+++..+++.+++ .+|++
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~----------------~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQM----------------KVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHH----------------HHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhH
Confidence 99999999999999999997653321100 00000001111222223455677777765 59999
Q ss_pred CCC---HHHHHH
Q 000859 1221 RPS---SRQVCD 1229 (1251)
Q Consensus 1221 RPs---~~eil~ 1229 (1251)
|++ ++++++
T Consensus 293 R~~~~~~~ei~~ 304 (382)
T cd05625 293 RLGKNGADEIKA 304 (382)
T ss_pred cCCCCCHHHHhc
Confidence 997 777764
No 135
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.9e-35 Score=335.06 Aligned_cols=245 Identities=23% Similarity=0.354 Sum_probs=190.3
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHH---HhccCCCccceeceeeecCCCcee
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTL---GRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++ +.++||||+++++++.. ....+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~--~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT--EDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc--CCEEE
Confidence 56678999999999999965 468999999996432 222345566676665 45679999999998754 34579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|..++++ ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 lv~E~~~~~~L~~~~~~--------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~ 147 (324)
T cd05589 79 FVMEYAAGGDLMMHIHT--------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGL 147 (324)
T ss_pred EEEcCCCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccC
Confidence 99999999999988864 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
++..... ........|++.|+|||.+.+..++.++|||||||++|||++|+.||.+....+ ....
T Consensus 148 ~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-----~~~~------ 212 (324)
T cd05589 148 CKEGMGF----GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-----VFDS------ 212 (324)
T ss_pred CccCCCC----CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-----HHHH------
Confidence 8643211 112233578999999999999999999999999999999999999997542211 1110
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCD 1229 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1229 (1251)
..... ... +...+..+.+++.+|++.||.+|| +++++++
T Consensus 213 -----i~~~~--~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 213 -----IVNDE--VRY--PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----HHhCC--CCC--CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 00000 011 112345688999999999999999 4666654
No 136
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.6e-34 Score=321.16 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=202.2
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|++++++++++.. ...+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEECC---CCcEEEEE
Confidence 45788889999999999999888888999999864332 34678999999999999999999987632 34689999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++++.. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||.+..+
T Consensus 81 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~ 152 (260)
T cd05070 81 YMSKGSLLDFLKDGE-----GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLI 152 (260)
T ss_pred ecCCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeec
Confidence 999999999997642 34689999999999999999999999 9999999999999999999999999999765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
...... ......++..|+|||...+..++.++||||||+++|||++ |+.||.+....+ .....
T Consensus 153 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-----~~~~~-------- 216 (260)
T cd05070 153 EDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-----VLEQV-------- 216 (260)
T ss_pred cCcccc---cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHH--------
Confidence 332111 1111235678999999988889999999999999999999 899997542211 11110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
.. .. ..+.+...+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 217 ---~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 217 ---ER-GY--RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---Hc-CC--CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00 00 111223345679999999999999999999999998875
No 137
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=310.26 Aligned_cols=255 Identities=23% Similarity=0.289 Sum_probs=203.7
Q ss_pred CCCcCceecccCCceEEEEEecC-CcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.|+..+.||+|.-|+||.++.++ +..+|+|++.+.. ..........|-+||+.++||.++.+|+.+.. +...++|
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet--~~~~cl~ 155 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET--DKYSCLV 155 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec--cceeEEE
Confidence 35667789999999999997764 5899999996543 22334566789999999999999999998844 5667999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
||||+||+|...+++++ .+.+++..++-+|..++-||+|||-. |||.||+||+||||.++|.+.++||.++.
T Consensus 156 meyCpGGdL~~LrqkQp-----~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQP-----GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSL 227 (459)
T ss_pred EecCCCccHHHHHhhCC-----CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccc
Confidence 99999999999999876 78899999999999999999999999 99999999999999999999999999875
Q ss_pred ccccc-------c------------------------C-C--------------------CCcccceeecccceeccccc
Q 000859 1104 ALVED-------Y------------------------N-S--------------------NTESNTWFAGSYGYIAPEYA 1131 (1251)
Q Consensus 1104 ~~~~~-------~------------------------~-~--------------------~~~~~~~~~gt~~y~aPE~~ 1131 (1251)
..... . . . ...+...++||-.|.|||++
T Consensus 228 ~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI 307 (459)
T KOG0610|consen 228 RCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVI 307 (459)
T ss_pred cCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceee
Confidence 43110 0 0 0 00112236899999999999
Q ss_pred ccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHH
Q 000859 1132 YSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIAL 1211 (1251)
Q Consensus 1132 ~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1211 (1251)
.+...+.++|+|+|||++|||+.|+.||.+....+.- .. ++.+ ...++.....+....++|+
T Consensus 308 ~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl-~N---------------Iv~~--~l~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 308 RGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETL-RN---------------IVGQ--PLKFPEEPEVSSAAKDLIR 369 (459)
T ss_pred ecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhH-HH---------------HhcC--CCcCCCCCcchhHHHHHHH
Confidence 9999999999999999999999999999876443321 11 1111 1233444456677899999
Q ss_pred HccccCCCCCCC----HHHHHH
Q 000859 1212 QCTKTSPQERPS----SRQVCD 1229 (1251)
Q Consensus 1212 ~cl~~dP~~RPs----~~eil~ 1229 (1251)
+.+.+||.+|.- ++||.+
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred HHhccChhhhhccccchHHhhc
Confidence 999999999988 555543
No 138
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.1e-34 Score=323.00 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=199.7
Q ss_pred CcCceecccCCceEEEEEecCC-c--EEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecC----CCce
Q 000859 949 SDEFIIGSGGSGTVYKAELANG-A--TVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG----AGSN 1020 (1251)
Q Consensus 949 ~~~~~lG~G~fg~V~~~~~~~~-~--~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~~ 1020 (1251)
.+.+.||+|+||.||+|...+. . .||+|.+.... .....+.+.+|+++++.++||||+++++++.... ....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4567899999999999976543 2 69999886542 3344678889999999999999999999875432 2235
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
+++|||+++|+|.+++..... ......+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRL-GDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcc-cCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 899999999999998854321 11234589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+++.+....... ......+++.|+|||...+..++.++|||||||++|||++ |+.||......+ ... ...
T Consensus 158 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~---~~~-- 228 (272)
T cd05075 158 LSKKIYNGDYYR--QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE--IYD---YLR-- 228 (272)
T ss_pred cccccCccccee--cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH---HHH--
Confidence 998654322111 1122345778999999999899999999999999999999 899987542211 111 000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.. ...+.....+..+.+++.+||+.||++|||++++++.|+++
T Consensus 229 ---------~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 ---------QG---NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---------cC---CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 00111122445688999999999999999999999999875
No 139
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.5e-34 Score=326.28 Aligned_cols=266 Identities=26% Similarity=0.430 Sum_probs=206.7
Q ss_pred cCCCcCceecccCCceEEEEEe------cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL------ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.+|.+.+.||+|+||+||++.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEG--DP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--Cc
Confidence 4578888999999999999964 234569999986443 33456789999999999999999999988643 45
Q ss_pred eeEEEeecCCCChHHhhhcCCCC------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVN------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME 1093 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 1093 (1251)
.++||||+++|+|.+++...... ......+++..+..++.|++.|++|||++ +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 79999999999999999754310 01123589999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHH
Q 000859 1094 AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRW 1172 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~ 1172 (1251)
+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||......+. ..
T Consensus 159 ~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~--~~- 233 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV--IE- 233 (288)
T ss_pred EEeccCCccccccCCcee--ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HH-
Confidence 999999999765322111 11122345788999999998899999999999999999998 9999875532211 00
Q ss_pred HHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1173 VEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
.. ..... .+.....+.++.+++.+||+.||.+|||++++.+.|+++.+..
T Consensus 234 --~i-----------~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 234 --CI-----------TQGRV---LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred --HH-----------HcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 00 00000 0111123456899999999999999999999999999988654
No 140
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-34 Score=321.29 Aligned_cols=252 Identities=25% Similarity=0.403 Sum_probs=200.0
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+|...+.||+|+||.||+|++.++..||||.+.... ...+.+.+|+.++++++||||+++++++... ...++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ--RPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC--CCcEEEEE
Confidence 3477788999999999999988777789999986433 2346789999999999999999999988654 34699999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.+++... ...+++..++.++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++..
T Consensus 80 ~~~~~~l~~~i~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~ 150 (256)
T cd05113 80 YMSNGCLLNYLREH------GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYV 150 (256)
T ss_pred cCCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceec
Confidence 99999999999764 23689999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......++..|+|||...+..++.++|||||||++|||++ |+.||......+. ...
T Consensus 151 ~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~--~~~------------ 213 (256)
T cd05113 151 LDDEY---TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET--VEK------------ 213 (256)
T ss_pred CCCce---eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH--HHH------------
Confidence 33211 11112345678999999988889999999999999999999 9999865432111 110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
...... .. .+...+..+.+++.+||+.||++||++.++++.++
T Consensus 214 --~~~~~~-~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 214 --VSQGLR-LY--RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --HhcCCC-CC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001000 00 11123467899999999999999999999998764
No 141
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-34 Score=339.74 Aligned_cols=262 Identities=21% Similarity=0.274 Sum_probs=194.8
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|++.+.||+|+||.||+|. ..+++.||+|+.. .+.+.+|++++++++|||||++++++... ...++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~lv 161 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYN--KFTCLI 161 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEEC--CeeEEE
Confidence 4579999999999999999994 5678999999753 23467899999999999999999988653 456899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
+|++. ++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 162 ~e~~~-~~L~~~l~~-------~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 162 LPRYK-TDLYCYLAA-------KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred EecCC-CCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 99995 789998865 34688999999999999999999999 99999999999999999999999999996
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccc------hhHHHHHHHHH
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVE------MDMVRWVEMHM 1177 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~------~~~~~~~~~~~ 1177 (1251)
...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........
T Consensus 231 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g 307 (391)
T PHA03212 231 FPVDIN---ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSG 307 (391)
T ss_pred cccccc---ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhc
Confidence 532211 111223579999999999999899999999999999999999998875332211 11111111000
Q ss_pred hc----c---chhhhhhh----cc-cCCC-CCC---chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1178 EM----S---GSAREELL----DD-QMKP-LLP---GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1178 ~~----~---~~~~~~~~----~~-~~~~-~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. . ........ .. ...+ ..+ .....+.++.+++.+|++.||++|||++|+++
T Consensus 308 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 308 THPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred CChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0 00000000 00 0000 011 11124567899999999999999999999986
No 142
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-34 Score=325.87 Aligned_cols=249 Identities=20% Similarity=0.275 Sum_probs=191.9
Q ss_pred ecccCCceEEEEEe-cCCcEEEEEEeccCCch--hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAEL-ANGATVAVKKISCKDDH--LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||+|+||+||+|.. .+++.||+|++...... ...+.+..|+++++.++||||+++.+++.. ....++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT--KTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC--CCeEEEEEeCCCCC
Confidence 69999999999954 47899999998643321 223567789999999999999999987754 34579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++.... .....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+..+....
T Consensus 79 ~L~~~~~~~~---~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~- 151 (280)
T cd05608 79 DLRYHIYNVD---EENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ- 151 (280)
T ss_pred CHHHHHHhcc---ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-
Confidence 9998875421 1235689999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..... ....
T Consensus 152 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~-----------~~~~-- 214 (280)
T cd05608 152 ---SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK-----------QRIL-- 214 (280)
T ss_pred ---ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHH-----------Hhhc--
Confidence 112235789999999999999999999999999999999999999975422111 00000 0000
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
......+...+..+.+++.+|++.||++|| +++++++.
T Consensus 215 --~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 215 --NDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred --ccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 111112223456788999999999999999 66777653
No 143
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=327.23 Aligned_cols=243 Identities=26% Similarity=0.429 Sum_probs=198.5
Q ss_pred eecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCC
Q 000859 953 IIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGS 1031 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gs 1031 (1251)
++|+|.||+||-|+ ..+...+|||.+..+.+. ..+....|++..++++|+|||+++|.|.+. +..-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~sen--Gf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSEN--GFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCCC--CeEEEEeecCCCCc
Confidence 79999999999995 455678999999765544 456788999999999999999999987543 35678999999999
Q ss_pred hHHhhhcCCCCcccCCCC--CHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec-CCCCeEEcccccccccccc
Q 000859 1032 VWDWLHKQPVNIKMRKSL--DWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD-SNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1032 L~~~l~~~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~~~ 1108 (1251)
|.+.|+... +++ .+.++-.+..||++|+.|||+. .|||||||-+||+|+ -.|.+||+|||-++.+..
T Consensus 659 LSsLLrskW------GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg- 728 (1226)
T KOG4279|consen 659 LSSLLRSKW------GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG- 728 (1226)
T ss_pred HHHHHHhcc------CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-
Confidence 999998764 344 5677778899999999999999 999999999999996 478999999999987632
Q ss_pred cCCCCcccceeecccceecccccccC--CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1109 YNSNTESNTWFAGSYGYIAPEYAYSL--KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1109 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
-......+.||..|||||++..+ .|+.++|||||||++.||.||++||-....... .
T Consensus 729 ---inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------------------A 787 (1226)
T KOG4279|consen 729 ---INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------------------A 787 (1226)
T ss_pred ---CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------------------h
Confidence 22333447899999999999865 488999999999999999999999976533221 1
Q ss_pred hhcc-cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1187 LLDD-QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1187 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
++.- .++...+.++..+.+...+|.+|+.+||.+||++++++.
T Consensus 788 MFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 788 MFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred hhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 2222 223344566778888999999999999999999999874
No 144
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.5e-34 Score=321.20 Aligned_cols=255 Identities=25% Similarity=0.416 Sum_probs=204.1
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.++|+..++||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++||||+++++++.. ...+++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v~ 79 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPIYIIT 79 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCcEEEE
Confidence 456888899999999999999888899999999864332 34678999999999999999999987632 3468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+..
T Consensus 80 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 151 (260)
T cd05067 80 EYMENGSLVDFLKTPE-----GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARL 151 (260)
T ss_pred EcCCCCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceee
Confidence 9999999999987543 45689999999999999999999998 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
....... ......++..|+|||++....++.++||||||+++||+++ |+.||.+....+. ....
T Consensus 152 ~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~------- 216 (260)
T cd05067 152 IEDNEYT---AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV-----IQNL------- 216 (260)
T ss_pred cCCCCcc---cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH-----HHHH-------
Confidence 5422111 1112345678999999988889999999999999999999 9999975532111 1110
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.... ..+.+...+.++.+++.+|++.+|++||+++++...|+++
T Consensus 217 -----~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 217 -----ERGY--RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -----HcCC--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 0000 0111222445799999999999999999999999998763
No 145
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.3e-34 Score=320.85 Aligned_cols=261 Identities=22% Similarity=0.324 Sum_probs=205.3
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.+|++.+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+++++.++||||+++++++... ...++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED--NELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC--CeEEE
Confidence 4688889999999999999964 478999999876422 344456788999999999999999999988654 45689
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+||+++|+|.+++.... .....+++..+..++.|++.|++|||++ +++|+||||+||+++.++.++|+|||.+
T Consensus 80 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~ 153 (267)
T cd08228 80 VLELADAGDLSQMIKYFK---KQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEecCCCcHHHHHHHhh---hccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccc
Confidence 999999999999886421 1134578999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
....... .......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||........ .+....
T Consensus 154 ~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~---~~~~~~------ 220 (267)
T cd08228 154 RFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF---SLCQKI------ 220 (267)
T ss_pred eeccchh----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH---HHHHHH------
Confidence 7653221 111224678899999999888899999999999999999999999864422111 111110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.....+.. .....+..+.+++.+||+.+|++||++++|++.+++.
T Consensus 221 ------~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 221 ------EQCDYPPL-PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ------hcCCCCCC-ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 00000111 1223556799999999999999999999999998864
No 146
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2e-34 Score=353.82 Aligned_cols=271 Identities=24% Similarity=0.315 Sum_probs=206.7
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.+|++.++||+|+||.||+|.. .+|+.||||++.... .....+.+.+|++++++++||||+++++++... ...++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~--~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG--DPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC--CEEEE
Confidence 4688899999999999999965 468999999986432 233456789999999999999999999988553 45799
Q ss_pred EEeecCCCChHHhhhcCCC----CcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1023 IYEYMENGSVWDWLHKQPV----NIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~----~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
||||+++|+|.+++..... ........++..+.+++.||++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEe
Confidence 9999999999999864211 011134567888899999999999999999 999999999999999999999999
Q ss_pred cccccccccccCC--------------CCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccc
Q 000859 1099 FGLAKALVEDYNS--------------NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFG 1164 (1251)
Q Consensus 1099 fG~a~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~ 1164 (1251)
||+++........ .........||+.|+|||++.+..++.++||||+||++|||+||+.||.....
T Consensus 157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~ 236 (932)
T PRK13184 157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG 236 (932)
T ss_pred cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence 9999765211100 00111224699999999999999999999999999999999999999975422
Q ss_pred cchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHhhcCCC
Q 000859 1165 VEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQER-PSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~eil~~L~~~~~~~ 1238 (1251)
.+..... ..... .........++.+.+++.+|++.||++| ++++++.+.|+.+....
T Consensus 237 ~ki~~~~--------------~i~~P---~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 237 RKISYRD--------------VILSP---IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred hhhhhhh--------------hccCh---hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 2111000 00000 0001112345668899999999999999 56788888888887643
No 147
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.8e-35 Score=342.57 Aligned_cols=255 Identities=22% Similarity=0.287 Sum_probs=195.0
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|++++++++||||+++++.+.. ....++|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEEE
Confidence 688899999999999999954 568999999986432 12234567899999999999999999998854 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.+ .+.+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|.
T Consensus 80 ~E~~~~g~L~~~i~~-------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 80 MDYIPGGDMMSLLIR-------LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred EeCCCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 999999999999976 34678899999999999999999999 99999999999999999999999999985
Q ss_pred ccccccCC---------------------------------------CCcccceeecccceecccccccCCCCCccceee
Q 000859 1104 ALVEDYNS---------------------------------------NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYS 1144 (1251)
Q Consensus 1104 ~~~~~~~~---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwS 1144 (1251)
.+...... .........||+.|+|||++.+..++.++||||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 229 (376)
T cd05598 150 GFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 229 (376)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeee
Confidence 43110000 000011247999999999999999999999999
Q ss_pred hhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC--
Q 000859 1145 MGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-- 1222 (1251)
Q Consensus 1145 lGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-- 1222 (1251)
+||++|||++|+.||.+....+... .... +. .....+.....+.++.+++.+|+ .+|.+|+
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~-----~i~~----~~-------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQL-----KVIN----WE-------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHH-----HHhc----cC-------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 9999999999999997653322110 0000 00 00011111123455677888876 5999999
Q ss_pred -CHHHHHHH
Q 000859 1223 -SSRQVCDL 1230 (1251)
Q Consensus 1223 -s~~eil~~ 1230 (1251)
++.++++.
T Consensus 293 ~t~~ell~h 301 (376)
T cd05598 293 NGADEIKAH 301 (376)
T ss_pred CCHHHHhCC
Confidence 88888765
No 148
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.5e-34 Score=318.62 Aligned_cols=252 Identities=27% Similarity=0.401 Sum_probs=199.5
Q ss_pred ceecccCCceEEEEEecC----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELAN----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
++||+|+||.||+|.+.. +..||+|.+.........+.+.+|+++++.++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEeC
Confidence 369999999999995432 268999999766554456788999999999999999999997642 2468999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++....
T Consensus 78 ~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~ 147 (257)
T cd05060 78 PLGPLLKYLKKR-------REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGA 147 (257)
T ss_pred CCCcHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeec
Confidence 999999999763 3689999999999999999999999 999999999999999999999999999986643
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
..... .......++..|+|||.+.+..++.++|||||||++||+++ |+.||....+.+ ...+....
T Consensus 148 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--~~~~~~~~---------- 214 (257)
T cd05060 148 GSDYY-RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--VIAMLESG---------- 214 (257)
T ss_pred CCccc-ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcC----------
Confidence 22111 11111234568999999998899999999999999999998 999997653321 11111100
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
...+.+..++..+.+++.+||+.+|++||++.++++.|+++.+
T Consensus 215 -------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~~ 257 (257)
T cd05060 215 -------ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDPE 257 (257)
T ss_pred -------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhccC
Confidence 0011122345678899999999999999999999999998753
No 149
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.8e-34 Score=326.22 Aligned_cols=265 Identities=27% Similarity=0.409 Sum_probs=204.9
Q ss_pred cCCCcCceecccCCceEEEEEec-CCc--EEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGA--TVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
++|++.+.||+|+||.||+|... ++. .+|+|.++........+.+.+|+++++++ +||||+++++++... ...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR--GYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC--Ccce
Confidence 46888899999999999999654 333 47888887544444567789999999999 799999999987543 4569
Q ss_pred EEEeecCCCChHHhhhcCCCC---------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1022 LIYEYMENGSVWDWLHKQPVN---------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
+|+||+++|+|.+++++.... ......+++..+..++.|++.|++|||++ +|+||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 999999999999999764311 11224689999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHH
Q 000859 1093 EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1093 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1171 (1251)
.+||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |..||......+
T Consensus 157 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~----- 226 (297)
T cd05089 157 ASKIADFGLSRGEEVYV-----KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE----- 226 (297)
T ss_pred eEEECCcCCCcccccee-----ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----
Confidence 99999999986421110 1111123567999999988889999999999999999998 999997553211
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCc
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRI 1239 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~ 1239 (1251)
..... ...... +.+...+.++.+++.+||+.+|.+||+++++++.|+++.+...
T Consensus 227 ~~~~~------------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 227 LYEKL------------PQGYRM--EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHHHH------------hcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11110 001111 1122345678999999999999999999999999999887553
No 150
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-34 Score=337.49 Aligned_cols=255 Identities=19% Similarity=0.247 Sum_probs=197.8
Q ss_pred hhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
...+|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++.. +...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~--~~~~ 118 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD--DKYL 118 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCEE
Confidence 345688999999999999999955 468899999986422 22234567889999999999999999987754 4567
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 119 ~lv~Ey~~gg~L~~~l~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG 187 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSN--------YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (370)
T ss_pred EEEEcCCCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEecc
Confidence 999999999999999875 2478888999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccC----CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL----KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
.++...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+...... .
T Consensus 188 ~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-----~--- 256 (370)
T cd05596 188 TCMKMDANG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-----Y--- 256 (370)
T ss_pred ceeeccCCC---cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH-----H---
Confidence 997653221 1112235789999999988653 478999999999999999999999976422110 0
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQE--RPSSRQVCDL 1230 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1230 (1251)
..+.........+.....+.++.+++.+|++.+|++ ||+++|+++.
T Consensus 257 --------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 257 --------SKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --------HHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 011111101112222224567889999999999998 9999999765
No 151
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.3e-34 Score=325.77 Aligned_cols=269 Identities=23% Similarity=0.366 Sum_probs=204.4
Q ss_pred cCCCcCceecccCCceEEEEEec-----------------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-----------------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKL 1008 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 1008 (1251)
++|++.+.||+|+||.||+++.. ++..||+|++.........+.+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 45888899999999999998532 2346999999765555556789999999999999999999
Q ss_pred eceeeecCCCceeEEEeecCCCChHHhhhcCCCC----cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 000859 1009 MGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVN----IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSS 1084 (1251)
Q Consensus 1009 ~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 1084 (1251)
++++... ...++||||+++|+|.+++...... ......+++.++..++.|++.|++|||+. +++||||||+
T Consensus 85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 85 LAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred EEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 9988654 3469999999999999999764321 12234578899999999999999999999 9999999999
Q ss_pred CeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh--CCCCCCCc
Q 000859 1085 NILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS--GKMPTDAT 1162 (1251)
Q Consensus 1085 Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t--g~~p~~~~ 1162 (1251)
||+++.++.++++|||.++.+...... .......++..|+|||...+..++.++|||||||++|||++ |..||...
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYY--RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcce--eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 999999999999999999765332111 11122344678999999888889999999999999999998 77888654
Q ss_pred cccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1163 FGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
...+. .+.... ... ........+.+..++..+.+++.+||+.||++||++++|.+.|++
T Consensus 238 ~~~~~-----~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQV-----IENTGE----FFR---DQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHH-----HHHHHH----HHh---hccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 32221 110000 000 000001112222345678999999999999999999999998864
No 152
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-34 Score=326.41 Aligned_cols=261 Identities=22% Similarity=0.351 Sum_probs=202.6
Q ss_pred CCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+|+..+.||+|+||.||+|... ++..||+|++.........+.+.+|+.+++.++||||+++++++... ...
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--QPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--Cce
Confidence 3566678999999999999653 24789999997665555567789999999999999999999988654 346
Q ss_pred eEEEeecCCCChHHhhhcCCCC---------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVN---------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN 1091 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 1091 (1251)
++++||+++++|.+++...... ......+++..+.+++.|++.|++|+|++ +|+||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 8999999999999998643211 11134588999999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHH
Q 000859 1092 MEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMV 1170 (1251)
Q Consensus 1092 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1170 (1251)
+.+||+|||+++........ .......+++.|+|||.+.+..++.++||||+||++|||++ |..||.+....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----- 233 (283)
T cd05091 161 LNVKISDLGLFREVYAADYY--KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----- 233 (283)
T ss_pred CceEecccccccccccchhe--eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 99999999998765332111 11122345789999999988889999999999999999998 88888654221
Q ss_pred HHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1171 RWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
++.+... ... ..+.+..++..+.+++.+||+.+|++||++++|+..|+.
T Consensus 234 ~~~~~i~-----------~~~---~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVIEMIR-----------NRQ---VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHH-----------cCC---cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111 111 011123356678999999999999999999999998864
No 153
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.5e-34 Score=320.39 Aligned_cols=250 Identities=26% Similarity=0.414 Sum_probs=198.8
Q ss_pred CCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
+|+..+.||+|+||.||+|.++++..+|+|++..... ....+.+|++++++++||||+++++++... ...++||||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e~ 80 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ--RPIFIVTEY 80 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--CceEEEEec
Confidence 4777889999999999999887778999999854332 335788999999999999999999987544 456899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.++...
T Consensus 81 ~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 81 MANGCLLNYLRERK------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred CCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecc
Confidence 99999999997642 3689999999999999999999999 99999999999999999999999999987653
Q ss_pred cccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
..... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||......+. ... .
T Consensus 152 ~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~---~--------- 214 (256)
T cd05059 152 DDQYT---SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV--VES---V--------- 214 (256)
T ss_pred ccccc---ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH--HHH---H---------
Confidence 22111 1111234568999999998899999999999999999999 8999975422111 110 0
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
...... +.+...+.++.+++.+||+.+|++|||++|+++.|
T Consensus 215 ---~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 215 ---SAGYRL--YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---HcCCcC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 000001 11122466799999999999999999999999886
No 154
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.5e-34 Score=333.58 Aligned_cols=242 Identities=21% Similarity=0.295 Sum_probs=189.8
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCC-CccceeceeeecCCCceeE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHR-HLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~~~l 1022 (1251)
+|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+..|.++++.+.|+ +|+++++++.. ....++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--CCEEEE
Confidence 4778889999999999999654 57899999986432 223446678899999999764 57788777644 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~E~~~~g~L~~~~~~-------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05587 79 VMEYVNGGDLMYHIQQ-------VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMC 148 (324)
T ss_pred EEcCCCCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcc
Confidence 9999999999999876 34688999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+.... .........||+.|+|||++.+..++.++||||+||++|||+||+.||.+....+. .....
T Consensus 149 ~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-----~~~i~----- 214 (324)
T cd05587 149 KENIF----GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-----FQSIM----- 214 (324)
T ss_pred eecCC----CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-----HHHHH-----
Confidence 64321 11122335789999999999999999999999999999999999999975532111 00000
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS 1224 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1224 (1251)
.. ....+...+.++.+++.+|++.||.+|++.
T Consensus 215 ------~~----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 215 ------EH----NVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ------cC----CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00 011112234568899999999999999986
No 155
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-34 Score=333.94 Aligned_cols=238 Identities=26% Similarity=0.344 Sum_probs=185.4
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHH-HHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVK-TLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|.. .+|+.||||++.... .....+.+..|.. +++.++||||+++++++.. ....++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcCC
Confidence 3699999999999965 478999999986432 1122344555555 4677899999999988754 44679999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.. ...+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~g~L~~~l~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (323)
T cd05575 79 NGGELFFHLQR-------ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE 148 (323)
T ss_pred CCCCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence 99999999876 34688999999999999999999999 999999999999999999999999999865322
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----~~~~i----------- 208 (323)
T cd05575 149 H----SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-----MYDNI----------- 208 (323)
T ss_pred C----CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-----HHHHH-----------
Confidence 1 112233578999999999999999999999999999999999999997542211 11110
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
.... .......+.++.+++.+|++.||.+||+++
T Consensus 209 ~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 209 LNKP----LRLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HcCC----CCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0100 001111355688999999999999999985
No 156
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.4e-34 Score=320.10 Aligned_cols=263 Identities=24% Similarity=0.411 Sum_probs=203.3
Q ss_pred CCcCceecccCCceEEEEEec-C---CcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----C
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-N---GATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA----G 1018 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~ 1018 (1251)
|...+.||+|+||.||+|... + +..||||++.... .....+.+.+|+++++.++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456778999999999999653 2 3679999987543 23345678999999999999999999998765432 2
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++++||+++|+|..++...... .....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG-GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 358999999999999998654311 1234689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||.++.+....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+ ..++. .
T Consensus 157 fg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~~~~~---~ 229 (273)
T cd05035 157 FGLSKKIYSGDYYR--QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--IYDYL---R 229 (273)
T ss_pred ccceeecccccccc--ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH---H
Confidence 99998654322111 1122345678999999988889999999999999999999 899986543211 11111 0
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
... ....+...+.++.+++.+||+.||++|||+.|+++.|++++
T Consensus 230 -----------~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 230 -----------HGN---RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred -----------cCC---CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 000 01112234567899999999999999999999999998763
No 157
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.8e-34 Score=332.67 Aligned_cols=242 Identities=21% Similarity=0.297 Sum_probs=190.1
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
+|...+.||+|+||.||+|... +++.||||++.... .....+.+..|..++... +|++|+++++++.. ....++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--MDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--CCEEEE
Confidence 4778889999999999999654 67899999987432 122334567788888877 58999999887754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.. ...+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++
T Consensus 79 v~E~~~~g~L~~~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~ 148 (323)
T cd05616 79 VMEYVNGGDLMYQIQQ-------VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 148 (323)
T ss_pred EEcCCCCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCc
Confidence 9999999999999876 34688999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. . ....
T Consensus 149 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~--~---~~i~----- 214 (323)
T cd05616 149 KENMWD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--F---QSIM----- 214 (323)
T ss_pred eecCCC----CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH--H---HHHH-----
Confidence 653211 1122235789999999999999999999999999999999999999976532111 1 1000
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS 1224 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1224 (1251)
.. ....+...+.++.+++.+|++.||++|+++
T Consensus 215 ------~~----~~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 215 ------EH----NVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------hC----CCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 00 011112244568899999999999999985
No 158
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.8e-34 Score=326.19 Aligned_cols=266 Identities=27% Similarity=0.407 Sum_probs=205.0
Q ss_pred cCCCcCceecccCCceEEEEEec-CCc--EEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGA--TVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
++|++.+.||+|+||.||+|..+ ++. .+|+|.+.........+.+.+|++++.++ +||||+++++++... ...+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~--~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC--CCce
Confidence 45888889999999999999654 454 46888776444444567888999999999 899999999988543 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCc---------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNI---------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
+||||+++|+|.+++++..... .....+++.+++.++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 9999999999999997643110 1124689999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHH
Q 000859 1093 EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1093 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~ 1171 (1251)
.+||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||......+
T Consensus 162 ~~kl~dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----- 231 (303)
T cd05088 162 VAKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----- 231 (303)
T ss_pred cEEeCccccCcccchh-----hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-----
Confidence 9999999998642111 11111234678999999988889999999999999999998 999996542211
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCcc
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIV 1240 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~ 1240 (1251)
..+... ...... .+...+.++.+++.+||+.+|++||++++++..++++...+..
T Consensus 232 ~~~~~~------------~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~ 286 (303)
T cd05088 232 LYEKLP------------QGYRLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 286 (303)
T ss_pred HHHHHh------------cCCcCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhh
Confidence 111100 000011 1112345688999999999999999999999999998876653
No 159
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.7e-34 Score=318.29 Aligned_cols=254 Identities=26% Similarity=0.443 Sum_probs=201.8
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+|.....||+|+||.||+|....+..||+|.+.... ...+.+.+|++++++++|||++++++++.. ...+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcEEEEE
Confidence 4577888999999999999988777789999875432 234678899999999999999999987632 34689999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++..
T Consensus 81 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~ 152 (260)
T cd05069 81 FMGKGSLLDFLKEGD-----GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLI 152 (260)
T ss_pred cCCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEc
Confidence 999999999997642 34578999999999999999999999 9999999999999999999999999999765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......++..|+|||...+..++.++||||+||++|||++ |+.||.+....+ ...+.
T Consensus 153 ~~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~----------- 216 (260)
T cd05069 153 EDNEY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQV----------- 216 (260)
T ss_pred cCCcc---cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH-----------
Confidence 32211 11112345778999999988899999999999999999999 999997643211 11110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.. .. ..+.+...+..+.+++.+||+.||++||+++++.+.|+++
T Consensus 217 ---~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 260 (260)
T cd05069 217 ---ER-GY--RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260 (260)
T ss_pred ---Hc-CC--CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00 00 0111223456789999999999999999999999998763
No 160
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=353.39 Aligned_cols=268 Identities=27% Similarity=0.444 Sum_probs=214.3
Q ss_pred hcCCCcCceecccCCceEEEEEec--------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA--------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
.++....+.+|+|+||.||+|... ....||||..+......+.+.+..|+++|+.+ +|+||+.++|+|..
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~- 373 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ- 373 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc-
Confidence 334455568999999999999532 14579999998887777889999999999999 69999999999977
Q ss_pred CCCceeEEEeecCCCChHHhhhcCC--CCcc-------cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQP--VNIK-------MRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNI 1086 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~--~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 1086 (1251)
....++|+||+..|+|.+|++..+ .... ....++..+...++.|||.||+||++. ++||||+.++||
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNV 449 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNV 449 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhE
Confidence 445699999999999999998876 1111 113489999999999999999999999 999999999999
Q ss_pred eecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCcccc
Q 000859 1087 LLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGV 1165 (1251)
Q Consensus 1087 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~ 1165 (1251)
+++++..+||+|||+|+................ -+.+|||||.+....|+.++|||||||++||++| |..||.+....
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 999999999999999987554333322211111 3567999999999999999999999999999999 99999763211
Q ss_pred chhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1166 EMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
+ +..++.+ +. .+...+..+..+++++|+.||+.+|++||++.++.+.++..+.
T Consensus 529 ~-~l~~~l~---------------~G--~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 529 E-ELLEFLK---------------EG--NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred H-HHHHHHh---------------cC--CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 1 1111111 11 1233455578899999999999999999999999999999654
No 161
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.6e-34 Score=324.16 Aligned_cols=268 Identities=21% Similarity=0.359 Sum_probs=206.1
Q ss_pred hhcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
...+|++.+.||+|+||.||+|..+ .+..||+|.+...........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4567899999999999999999543 24589999986555444556788999999999999999999987554
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCc---ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCe
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNI---KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEA 1094 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 1094 (1251)
...++||||+++|+|.++++...... ......++..+.+++.|++.|++|||++ +|+||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 35699999999999999997532111 1124457788899999999999999999 99999999999999999999
Q ss_pred EEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHH
Q 000859 1095 HLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWV 1173 (1251)
Q Consensus 1095 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~ 1173 (1251)
|++|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+ ..
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-----~~ 231 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRK--GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-----VL 231 (288)
T ss_pred EECcCCccccccccccccc--cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HH
Confidence 9999999976533221111 111245678999999998899999999999999999999 788987542211 11
Q ss_pred HHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1174 EMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.. ..+.. ..+.+...+..+.+++.+|++.||++|||+.++++.+.+.+..
T Consensus 232 ~~-----------~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 232 KF-----------VMDGG---YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred HH-----------HHcCC---CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 10 00100 0011122346799999999999999999999999999886543
No 162
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.2e-34 Score=331.02 Aligned_cols=243 Identities=23% Similarity=0.327 Sum_probs=191.7
Q ss_pred ceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|... +++.||||++.... .....+.+..|.++++.+ +||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT--KDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 36999999999999654 57899999986432 223345677899999888 79999999998754 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 79 ~~~~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 148 (318)
T cd05570 79 NGGDLMFHIQRS-------GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL 148 (318)
T ss_pred CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCc
Confidence 999999998763 4689999999999999999999999 999999999999999999999999999864321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ .....
T Consensus 149 ~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-----~~~~i----------- 208 (318)
T cd05570 149 G----GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-----LFQSI----------- 208 (318)
T ss_pred C----CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-----HHHHH-----------
Confidence 1 111223468999999999999999999999999999999999999997543211 11100
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS-----RQVCDL 1230 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~~ 1230 (1251)
.... ... +...+.++.+++.+||+.||.+||++ .++++.
T Consensus 209 ~~~~--~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 209 LEDE--VRY--PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HcCC--CCC--CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 0000 011 12234568899999999999999999 777653
No 163
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-34 Score=330.18 Aligned_cols=241 Identities=24% Similarity=0.349 Sum_probs=188.6
Q ss_pred ceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|+.. +++.||||+++... .....+.+..|..+++.. +||||+++++++... ...++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--ENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--CEEEEEEeCC
Confidence 36999999999999654 57899999986542 122335566788888765 899999999988653 4579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~g~L~~~l~~-------~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05619 79 NGGDLMFHIQS-------CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENML 148 (316)
T ss_pred CCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCC
Confidence 99999999976 34688999999999999999999999 999999999999999999999999999864321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||..|+|||++.+..++.++||||+||++|||++|+.||.+....+ . .+...
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~---~~~i~---------- 209 (316)
T cd05619 149 G----DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--L---FQSIR---------- 209 (316)
T ss_pred C----CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--H---HHHHH----------
Confidence 1 111223578999999999999899999999999999999999999997543211 1 11000
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR-QVC 1228 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil 1228 (1251)
. ..+..+ ...+.++.+++.+||+.||++||+++ ++.
T Consensus 210 -~--~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 210 -M--DNPCYP--RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -h--CCCCCC--ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0 001111 12345678999999999999999997 554
No 164
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.1e-34 Score=330.77 Aligned_cols=241 Identities=24% Similarity=0.325 Sum_probs=188.6
Q ss_pred ceecccCCceEEEEEec-CCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELA-NGATVAVKKISCKDD--HLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|+.. +|+.||+|++..... ....+.+..|..++... +||+|+++++++.. ....++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT--KEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe--CCEEEEEECCC
Confidence 36999999999999654 688999999964321 22345567788888765 89999999998854 34679999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~g~L~~~i~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05620 79 NGGDLMFHIQD-------KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF 148 (316)
T ss_pred CCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeeccc
Confidence 99999999876 34688999999999999999999999 999999999999999999999999999864321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ ..+...
T Consensus 149 ----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-----~~~~~~---------- 209 (316)
T cd05620 149 ----GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-----LFESIR---------- 209 (316)
T ss_pred ----CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----HHHHHH----------
Confidence 1112233578999999999999999999999999999999999999997542211 111100
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR-QVC 1228 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil 1228 (1251)
. ..+..+ .....++.+++.+|++.||++||++. ++.
T Consensus 210 -~--~~~~~~--~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 210 -V--DTPHYP--RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -h--CCCCCC--CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 001111 12345688999999999999999985 554
No 165
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.7e-34 Score=325.88 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=204.1
Q ss_pred cCCCcCceecccCCceEEEEEe------cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCC
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL------ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 1018 (1251)
++|...+.||+|+||.||+|.. .++..||||+++........+.+.+|+++++++ +||||+++++++... .
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG--G 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--C
Confidence 4588889999999999999953 234579999987655455567889999999999 799999999988654 3
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++||||+++|+|.++++... ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.+|++|
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~d 184 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR-----ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICD 184 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECC
Confidence 4699999999999999997632 23489999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||.++........ .......++..|+|||.+.+..++.++||||+||++|||++ |+.||......+. ....
T Consensus 185 fg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~----- 256 (302)
T cd05055 185 FGLARDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKL----- 256 (302)
T ss_pred CcccccccCCCce--eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHH-----
Confidence 9999765432111 11122345788999999999899999999999999999998 9999875532111 1010
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
........ .+...+.++.+++.+|++.+|++|||+.|+++.|.+.
T Consensus 257 ----------~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 ----------IKEGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----------HHcCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111111 1112345789999999999999999999999999875
No 166
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.4e-34 Score=315.09 Aligned_cols=247 Identities=25% Similarity=0.386 Sum_probs=197.3
Q ss_pred eecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCCh
Q 000859 953 IIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSV 1032 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL 1032 (1251)
+||+|+||.||+|...+++.||+|++...........+.+|++++++++||||+++++++... ...++||||+++|+|
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L 79 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVMELVPGGDF 79 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEECCCCCcH
Confidence 689999999999988888999999987655555556789999999999999999999988654 346999999999999
Q ss_pred HHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCC
Q 000859 1033 WDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSN 1112 (1251)
Q Consensus 1033 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 1112 (1251)
.+++... ...+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++.........
T Consensus 80 ~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~- 149 (250)
T cd05085 80 LSFLRKK------KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS- 149 (250)
T ss_pred HHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccc-
Confidence 9998753 24578999999999999999999999 9999999999999999999999999998654322111
Q ss_pred CcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhccc
Q 000859 1113 TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQ 1191 (1251)
Q Consensus 1113 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1251)
......++..|+|||++.+..++.++||||||+++||+++ |..||........ ... . ...
T Consensus 150 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~--~~~---~------------~~~ 210 (250)
T cd05085 150 --SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA--REQ---V------------EKG 210 (250)
T ss_pred --cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH--HHH---H------------HcC
Confidence 1111234678999999998899999999999999999998 9999975522111 000 0 000
Q ss_pred CCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1192 MKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1192 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.... .+...+.++.+++.+|++.+|++||++.|+.++|.
T Consensus 211 ~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 YRMS--CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCC--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0111 11124567899999999999999999999999875
No 167
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.1e-34 Score=324.87 Aligned_cols=270 Identities=26% Similarity=0.385 Sum_probs=205.3
Q ss_pred hcCCCcCceecccCCceEEEEEecC-----------------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccc
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELAN-----------------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVK 1007 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 1007 (1251)
..+|+..+.||+|+||.||+|.... +..||+|++.........+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3468889999999999999986432 24689999976665556778999999999999999999
Q ss_pred eeceeeecCCCceeEEEeecCCCChHHhhhcCCCC----cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 000859 1008 LMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVN----IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKS 1083 (1251)
Q Consensus 1008 l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 1083 (1251)
+++++... ...++++||+++++|.+++.+.... ......+++..++.++.|++.|++|||+. +|+||||||
T Consensus 84 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 84 LLGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred EEEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 99988654 4569999999999999999764311 01123689999999999999999999999 999999999
Q ss_pred CCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh--CCCCCCC
Q 000859 1084 SNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS--GKMPTDA 1161 (1251)
Q Consensus 1084 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t--g~~p~~~ 1161 (1251)
+||+++.++.++++|||.++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYY--RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred hceeecCCCceEEccccceeecccCcce--eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999998765322111 11122356789999999988889999999999999999998 7788765
Q ss_pred ccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1162 TFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
....+. ....... ..........+.+...+.++.+++.+|++.||++|||++||++.|++
T Consensus 237 ~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 237 LTDQQV--IENAGHF----------FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred cChHHH--HHHHHhc----------cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 422111 1111000 00000111111122244679999999999999999999999998863
No 168
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.8e-34 Score=321.67 Aligned_cols=263 Identities=22% Similarity=0.363 Sum_probs=205.7
Q ss_pred hcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 1018 (1251)
.++|.+.+.||+|+||.||+|... ++..||+|.+...........+.+|+.+++.++||||+++++++... .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--Q 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--C
Confidence 356888899999999999999653 24689999987555555567888999999999999999999988654 4
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCc---ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeE
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNI---KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAH 1095 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 1095 (1251)
..++||||+++|+|.+++....... .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 5699999999999999997543211 1234578999999999999999999999 999999999999999999999
Q ss_pred EcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHH
Q 000859 1096 LGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 1174 (1251)
|+|||+++.+...... .......++..|+|||.+.+..++.++|||||||++||+++ |+.||.+....+. ..+.
T Consensus 160 l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~- 234 (277)
T cd05032 160 IGDFGMTRDIYETDYY--RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV--LKFV- 234 (277)
T ss_pred ECCcccchhhccCccc--ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH--HHHH-
Confidence 9999999765432211 11122356789999999988889999999999999999998 9999865422111 1111
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
... ..... +...+.++.+++.+||+.+|++|||+.++++.|++
T Consensus 235 -------------~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 235 -------------IDG-GHLDL--PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred -------------hcC-CCCCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 000 01111 12235678999999999999999999999998863
No 169
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.4e-34 Score=335.11 Aligned_cols=256 Identities=19% Similarity=0.239 Sum_probs=196.9
Q ss_pred HhhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
....+|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.. +..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~ 117 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD--DKY 117 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCE
Confidence 34567999999999999999999654 68899999986422 22234567889999999999999999998754 456
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+||
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~--------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DF 186 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY--------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADF 186 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEec
Confidence 79999999999999999652 478889999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCC----CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK----ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
|+|+.+.... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||.+...... .
T Consensus 187 G~a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~-----~-- 256 (370)
T cd05621 187 GTCMKMDETG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT-----Y-- 256 (370)
T ss_pred ccceecccCC---ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH-----H--
Confidence 9997653211 11122357999999999987543 78899999999999999999999975422110 0
Q ss_pred HHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 000859 1176 HMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQE--RPSSRQVCDL 1230 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1230 (1251)
..+.........+.....+..+.+++.+|+..++.+ ||+++|+++.
T Consensus 257 ---------~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 257 ---------SKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ---------HHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 011111111112222234556788999999865544 8999999875
No 170
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.7e-34 Score=319.12 Aligned_cols=258 Identities=26% Similarity=0.420 Sum_probs=203.3
Q ss_pred cCCCcCceecccCCceEEEEEec-C---CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-N---GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.+|+..+.||+|+||.||+|... + +..||+|.+.........+.+..|+.++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--KPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--CccE
Confidence 45778889999999999999653 2 3479999987655455567889999999999999999999988543 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.
T Consensus 82 lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~ 152 (267)
T cd05066 82 IVTEYMENGSLDAFLRKH------DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGL 152 (267)
T ss_pred EEEEcCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCc
Confidence 999999999999999764 24689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
++.+....... .......++..|+|||.+.+..++.++|+|||||++||+++ |+.||......+ .....
T Consensus 153 ~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~------- 222 (267)
T cd05066 153 SRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAI------- 222 (267)
T ss_pred cccccccccee-eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHH-------
Confidence 97654321111 11111233568999999998899999999999999999887 999987543221 11111
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.+. .. .+.....+..+.+++.+|++.+|.+||++.++++.|.++
T Consensus 223 -------~~~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 223 -------EEG-YR--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------hCC-Cc--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000 00 111222456788999999999999999999999999875
No 171
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-34 Score=355.58 Aligned_cols=260 Identities=24% Similarity=0.340 Sum_probs=201.1
Q ss_pred HhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
....+|.+.+.||+|+||+||+|.. .++..||+|++.... .....+.+..|+.++++++|||||+++++|........
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456799999999999999999954 467889999986443 33455778999999999999999999998877666678
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCC----CCeeecCCCCCCeeecC------
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCV----PKILHRDIKSSNILLDS------ 1090 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~Dlkp~Nill~~------ 1090 (1251)
++||||+++|+|.+++.... .....+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~---~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCY---KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 99999999999999997532 113568999999999999999999998521 25999999999999964
Q ss_pred -----------CCCeEEcccccccccccccCCCCcccceeecccceeccccccc--CCCCCccceeehhHHHHHHhhCCC
Q 000859 1091 -----------NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS--LKATEKCDVYSMGIVLMELVSGKM 1157 (1251)
Q Consensus 1091 -----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGv~l~el~tg~~ 1157 (1251)
.+.+||+|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~ 241 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES-----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc-----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 2458999999997653211 1123478999999999864 458899999999999999999999
Q ss_pred CCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1158 PTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1158 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
||....... ........ .+..+ ....+.++.++|..||+.+|.+||++.|++.
T Consensus 242 PF~~~~~~~----qli~~lk~--------------~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 242 PFHKANNFS----QLISELKR--------------GPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCcCCcHH----HHHHHHhc--------------CCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 997542211 11111000 01111 1123467889999999999999999999984
No 172
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7e-34 Score=319.26 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=203.7
Q ss_pred hcCCCcCceecccCCceEEEEEec-CC---cEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NG---ATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.++|+..+.||+|+||.||+|... ++ ..||+|.+.........+.+..|++++++++||||+++.+++... ...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--KPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--CCc
Confidence 346788889999999999999654 33 379999987554455567889999999999999999999988654 456
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++||||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 82 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 152 (268)
T cd05063 82 MIITEYMENGALDKYLRDH------DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFG 152 (268)
T ss_pred EEEEEcCCCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCc
Confidence 9999999999999999763 35689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
++.......... ........+..|+|||++.+..++.++|||||||++||+++ |+.||...... .......
T Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~i~-- 224 (268)
T cd05063 153 LSRVLEDDPEGT-YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKAIN-- 224 (268)
T ss_pred cceecccccccc-eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHHHh--
Confidence 987653321111 11111223567999999988889999999999999999998 99999654221 1111110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.. ...+.....+.++.+++.+||+.+|++||++++|++.|.++
T Consensus 225 ---------~~---~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 225 ---------DG---FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---------cC---CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 01112223456789999999999999999999999999876
No 173
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-34 Score=347.33 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=198.5
Q ss_pred CCcCceecccCCceEEEEEe-cC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-AN-GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|...+.||+|+||.||+|.. .+ ++.||+|.+.... ....+.+.+|+.+++.++|||||++++++... ...++|||
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~lv~E 145 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSD--DKLLLIME 145 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC--CEEEEEEE
Confidence 77888999999999999954 34 6788998775433 33446778899999999999999999988654 46799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.++++... .....+++.++..++.|++.||+|+|++ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 146 ~~~gg~L~~~l~~~~---~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 146 YGSGGDLNKQIKQRL---KEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred CCCCCCHHHHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 999999999886431 1235688999999999999999999999 9999999999999999999999999999865
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ ....
T Consensus 220 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-----~~~~---------- 282 (478)
T PTZ00267 220 SDSVS--LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-----IMQQ---------- 282 (478)
T ss_pred CCccc--cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHH----------
Confidence 33211 112233568999999999999999999999999999999999999997542211 1110
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
....... +.+...+.++.+++.+||+.||++||++++++.
T Consensus 283 -~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 283 -VLYGKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -HHhCCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0111110 111224467899999999999999999999864
No 174
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2e-34 Score=332.67 Aligned_cols=244 Identities=25% Similarity=0.300 Sum_probs=187.0
Q ss_pred ceecccCCceEEEEEec-CCcEEEEEEeccCCc--hhhhHHHHHHHH-HHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELA-NGATVAVKKISCKDD--HLLNKSFTREVK-TLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|+.. +++.||+|++..... ......+..|.. +++.++||||+++++++.. ....++||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEEEEeCC
Confidence 36999999999999654 678899999864321 112234444444 5677899999999988754 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.. ...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~L~~~~~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~ 148 (325)
T cd05602 79 NGGELFYHLQR-------ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 148 (325)
T ss_pred CCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence 99999999976 34578888899999999999999999 999999999999999999999999999875422
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. .....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----~~~i~---------- 209 (325)
T cd05602 149 H----NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-----YDNIL---------- 209 (325)
T ss_pred C----CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-----HHHHH----------
Confidence 1 1122335789999999999999999999999999999999999999975432111 11100
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.. ........+..+.+++.+|++.||.+||++++.+..+
T Consensus 210 -~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 210 -NK----PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred -hC----CcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 00 0011112345688999999999999999987544433
No 175
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.3e-34 Score=323.01 Aligned_cols=264 Identities=25% Similarity=0.425 Sum_probs=205.5
Q ss_pred CCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+|...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 82 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGD--GDPL 82 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--CCce
Confidence 4777789999999999999642 34569999986433 3344678899999999999999999998864 3457
Q ss_pred eEEEeecCCCChHHhhhcCCCC---------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVN---------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN 1091 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 1091 (1251)
++||||+++++|.+++...... ......+++..++.++.|++.|++|||++ +|+||||||+||+++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 9999999999999999764321 11234589999999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHH
Q 000859 1092 MEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMV 1170 (1251)
Q Consensus 1092 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1170 (1251)
+.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||+| |+.||......+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 233 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---- 233 (291)
T ss_pred CcEEECCCCcccccCCCce--eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999976533211 111222456789999999999999999999999999999999 999987553321
Q ss_pred HHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1171 RWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
..+.. ..... .. .....+..+.+++.+||+.||++|||+++|+++|.++...
T Consensus 234 -~~~~~-----------~~~~~-~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 -VIECI-----------TQGRV-LE--RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHHH-----------hCCCC-CC--CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11100 00000 00 1122456788999999999999999999999999998653
No 176
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5.9e-34 Score=323.44 Aligned_cols=263 Identities=26% Similarity=0.398 Sum_probs=205.0
Q ss_pred hcCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 1018 (1251)
.++|+..+.||+|+||.||+|... ++..||+|++.........+.+.+|++++++++||||+++++++... .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG--K 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--C
Confidence 456888899999999999999653 46789999997665555667899999999999999999999987654 3
Q ss_pred ceeEEEeecCCCChHHhhhcCCCC---------------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVN---------------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKS 1083 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~---------------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 1083 (1251)
..++||||+++|+|.+++...... ......+++.+++.++.|++.|++|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 469999999999999999753210 01123578999999999999999999999 999999999
Q ss_pred CCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCc
Q 000859 1084 SNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDAT 1162 (1251)
Q Consensus 1084 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~ 1162 (1251)
+||++++++.+||+|||.++.+....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYK--ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred hheEecCCCceEECccccceecccCcccc--ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999987653321111 1112234678999999988899999999999999999998 88898654
Q ss_pred cccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1163 FGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
...+ ..... .+.. ..+.+...+.++.+++.+|++.||++|||++|+++.|++
T Consensus 237 ~~~~-----~~~~~-----------~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 AHEE-----VIYYV-----------RDGN---VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CHHH-----HHHHH-----------hcCC---CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 2211 11110 0000 011122345678999999999999999999999999874
No 177
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.7e-34 Score=325.53 Aligned_cols=267 Identities=22% Similarity=0.363 Sum_probs=207.0
Q ss_pred hcCCCcCceecccCCceEEEEEec--------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA--------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
..+|.+.+.||+|+||.||+|+.. ++..||+|.+.........+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 445778889999999999999641 24579999987554455567889999999999 899999999988654
Q ss_pred CCCceeEEEeecCCCChHHhhhcCCCCc---------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQPVNI---------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNI 1086 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 1086 (1251)
...++||||+++|+|.+++....... .....+++.++..++.||++|++|||+. +|+||||||+||
T Consensus 94 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 94 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 45689999999999999997643110 1134688999999999999999999999 999999999999
Q ss_pred eecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCcccc
Q 000859 1087 LLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGV 1165 (1251)
Q Consensus 1087 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~ 1165 (1251)
++++++.+||+|||.++.+...... .......++..|+|||++.+..++.++||||||+++||+++ |..||.+....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred EEcCCCcEEECCCccceeccccccc--ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 9999999999999999765432211 11122345678999999988889999999999999999998 88888654211
Q ss_pred chhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1166 EMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.+...... ... ...+..++.++.+++.+||+.+|++|||+.|+++.|.+++.-
T Consensus 247 -----~~~~~~~~------------~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 247 -----ELFKLLKE------------GHR--MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -----HHHHHHHc------------CCc--CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 11111100 000 011223456788999999999999999999999999988753
No 178
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-35 Score=292.85 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=204.1
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.++.+....||.|..|.||+++.+ +|..+|||.+......++.+.+...+.++... +.|.||+.+|||....+ .++
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d--V~I 168 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD--VFI 168 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch--HHH
Confidence 344555667999999999999665 58999999999888777888888899887776 48999999999976544 578
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
.||.|.. .+...+++- .+++++..+-++...+++|+.||.++| +|+|||+||+|||+|+.|.+|+||||.+
T Consensus 169 cMelMs~-C~ekLlkri------k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKRI------KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHHH-HHHHHHHHh------cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 9999853 455555543 456888888899999999999999986 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
-.+.+ ...++..+|.+.|||||.+. ...|+.++||||||+.++|+.||+.||.+-... .
T Consensus 240 Grlvd-----SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-F------------ 301 (391)
T KOG0983|consen 240 GRLVD-----SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-F------------ 301 (391)
T ss_pred ceeec-----ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-H------------
Confidence 76643 33344468999999999876 446899999999999999999999999763221 1
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.....+.+ ...|.++.....++.+.+++..|+.+|+.+||.+.+++++
T Consensus 302 --e~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 302 --EVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --HHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11122233 2236666666678889999999999999999999988754
No 179
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.8e-34 Score=317.37 Aligned_cols=251 Identities=25% Similarity=0.370 Sum_probs=201.2
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|+||.||+++. .+++.||+|.+.........+.+.+|+.+++.++||||+++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA--DGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CCEEEEEEe
Confidence 467788999999999999954 46899999998655545556788899999999999999999998754 346799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|++.+++.... ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++++|||.++..
T Consensus 79 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 150 (255)
T cd08219 79 YCDGGDLMQKIKLQR-----GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLL 150 (255)
T ss_pred eCCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceee
Confidence 999999999987532 34578999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
... ........|+..|+|||++.+..++.++|+||||+++|+|++|+.||........ ....
T Consensus 151 ~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-----~~~~--------- 212 (255)
T cd08219 151 TSP----GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-----ILKV--------- 212 (255)
T ss_pred ccc----ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-----HHHH---------
Confidence 322 1122235688999999999988899999999999999999999999975422111 0000
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...... +.+...+..+.+++.+||+.||++|||+++++..
T Consensus 213 --~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 213 --CQGSYK---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --hcCCCC---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000010 1122244568899999999999999999999864
No 180
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5e-34 Score=328.82 Aligned_cols=204 Identities=23% Similarity=0.370 Sum_probs=164.5
Q ss_pred CceecccCCceEEEEEec---CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 951 EFIIGSGGSGTVYKAELA---NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
..+||+|+||+||+|+.. +++.||+|.+..... ...+.+|++++++++||||+++++++........+++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 357999999999999754 467899999864332 34577899999999999999999988766666789999999
Q ss_pred CCCChHHhhhcCCCC--cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee----cCCCCeEEccccc
Q 000859 1028 ENGSVWDWLHKQPVN--IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL----DSNMEAHLGDFGL 1101 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~ 1101 (1251)
+ ++|.+++...... ......+++..++.++.|++.||+|||+. +|+||||||+||++ +..+.+||+|||+
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 6 5898888643211 11223589999999999999999999999 99999999999999 4568899999999
Q ss_pred ccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDAT 1162 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~ 1162 (1251)
|+.+..... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 159 a~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLK-PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCc-cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 976543221 1112233578999999999876 45899999999999999999999999654
No 181
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.1e-34 Score=329.96 Aligned_cols=244 Identities=21% Similarity=0.319 Sum_probs=189.2
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|.. .+++.||+|++.... .....+.+.+|+.++.++ +||+|+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEEEEeCC
Confidence 3699999999999965 467899999997543 223445678899999888 69999999997754 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|..++.. .+.+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~L~~~~~~-------~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 148 (327)
T cd05617 79 NGGDLMFHMQR-------QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG 148 (327)
T ss_pred CCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccC
Confidence 99999998875 34689999999999999999999999 999999999999999999999999999864321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccc-hhHHHHHHHHHhccchhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVE-MDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....+.....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------- 215 (327)
T cd05617 149 P----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI--------- 215 (327)
T ss_pred C----CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH---------
Confidence 1 112233578999999999999999999999999999999999999996432211 11111111110
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
.. .....+...+..+.+++.+|++.||++||+++
T Consensus 216 -~~----~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 216 -LE----KPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred -Hh----CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00 01111222345678999999999999999853
No 182
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.9e-34 Score=323.92 Aligned_cols=269 Identities=22% Similarity=0.364 Sum_probs=201.5
Q ss_pred cCCCcCceecccCCceEEEEEecC---------------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceec
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN---------------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMG 1010 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g 1010 (1251)
.+|++.+.||+|+||.||+|.... ...||+|++.........+.+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999986532 23589999976555555678999999999999999999999
Q ss_pred eeeecCCCceeEEEeecCCCChHHhhhcCCCC-----cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 000859 1011 HCCNKGAGSNLLIYEYMENGSVWDWLHKQPVN-----IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSN 1085 (1251)
Q Consensus 1011 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 1085 (1251)
++... ...++||||+++++|.+++...... ......+++..+.+++.|++.|++|||+. +++||||||+|
T Consensus 85 ~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 85 VCVSD--DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEcCC--CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 88654 4569999999999999999653210 01123478999999999999999999999 99999999999
Q ss_pred eeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh--CCCCCCCcc
Q 000859 1086 ILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS--GKMPTDATF 1163 (1251)
Q Consensus 1086 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t--g~~p~~~~~ 1163 (1251)
|++++++.+|++|||+++....... ........++..|+|||+..+..++.++|||||||++|||++ |..||....
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EEEcCCCcEEecccccccccccCcc--eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 9999999999999999976532211 111122345778999999988889999999999999999998 667776543
Q ss_pred ccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1164 GVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
..+. .....+.... . .... ........+..+.+++.+||+.||++|||+++|++.|.+
T Consensus 238 ~~~~-~~~~~~~~~~----~-----~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQV-IENTGEFFRN----Q-----GRQI--YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHHH-HHHHHHhhhh----c-----cccc--cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 2211 0010000000 0 0000 000111234579999999999999999999999998863
No 183
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.6e-34 Score=326.56 Aligned_cols=269 Identities=22% Similarity=0.353 Sum_probs=207.4
Q ss_pred hcCCCcCceecccCCceEEEEEec--------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA--------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
..+|.+.+.||+|+||.||+|... ++..||+|.+.........+.+.+|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 346888899999999999999642 23579999997654444556788999999999 799999999988654
Q ss_pred CCCceeEEEeecCCCChHHhhhcCCCCc---------ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQPVNI---------KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNI 1086 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 1086 (1251)
...++||||+++|+|.+++....... .....+++.++.+++.|++.|++|||+. +++||||||+||
T Consensus 97 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 97 --GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 35699999999999999997643110 1234589999999999999999999999 999999999999
Q ss_pred eecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCcccc
Q 000859 1087 LLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGV 1165 (1251)
Q Consensus 1087 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~ 1165 (1251)
+++.++.+||+|||.++........ .......++..|+|||.+.+..++.++||||+||++|||++ |+.||......
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred EEcCCCcEEECCCcccccccccchh--hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 9999999999999998765321111 11111234578999999998889999999999999999998 88898643211
Q ss_pred chhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCc
Q 000859 1166 EMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRI 1239 (1251)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~ 1239 (1251)
+..... .... ..+.+...+.++.+++.+||+.+|++|||+.++++.|.+++....
T Consensus 250 -----~~~~~~------------~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 250 -----ELFKLL------------KEGH--RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred -----HHHHHH------------HcCC--CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 111100 0000 111122345678899999999999999999999999999886543
No 184
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.4e-34 Score=321.32 Aligned_cols=249 Identities=24% Similarity=0.305 Sum_probs=191.5
Q ss_pred ecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||+|+||.||+++. .+|+.||+|++..... ....+.+..|++++++++||||+++++++.. ....++||||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES--KTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec--CCeEEEEEecCCCC
Confidence 69999999999954 4689999999864321 1223456679999999999999999988754 44579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 79 ~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-- 148 (277)
T cd05607 79 DLKYHIYNVG-----ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-- 148 (277)
T ss_pred CHHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--
Confidence 9998886532 34588999999999999999999999 9999999999999999999999999998765321
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ....... ....
T Consensus 149 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~-----------~~~~ 213 (277)
T cd05607 149 ---KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRR-----------TLED 213 (277)
T ss_pred ---ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHH-----------hhcc
Confidence 111234688999999999988899999999999999999999999975422111 1111000 0010
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.... .....+.++.+++.+||+.||++||+++|+++...
T Consensus 214 ~~~~---~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 214 EVKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cccc---ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 0000 01123556889999999999999999987765443
No 185
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.1e-33 Score=317.94 Aligned_cols=259 Identities=27% Similarity=0.401 Sum_probs=202.8
Q ss_pred cCCCcCceecccCCceEEEEEec-CC---cEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NG---ATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.+|+..+.||+|+||.||+|... ++ ..||||++.........+.|..|+.++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--RPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC--CceE
Confidence 34777889999999999999654 23 369999987655555667899999999999999999999987543 4568
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|.++++.. .+.+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.
T Consensus 82 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~ 152 (269)
T cd05065 82 IITEFMENGALDSFLRQN------DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGL 152 (269)
T ss_pred EEEecCCCCcHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcc
Confidence 999999999999999764 34689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCc-ccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1102 AKALVEDYNSNTE-SNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1102 a~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+............ .......+..|+|||.+.+..++.++||||+||++||+++ |..||......+ ...++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--~~~~i~----- 225 (269)
T cd05065 153 SRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VINAIE----- 225 (269)
T ss_pred ccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--HHHHHH-----
Confidence 8765332211110 0011112457999999998899999999999999999887 999997543211 111110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
. . ...+.+..++..+.+++.+||+.+|.+||++++++..|+++
T Consensus 226 ---------~-~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 ---------Q-D--YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------c-C--CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0 01112223456788999999999999999999999998875
No 186
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-33 Score=315.42 Aligned_cols=250 Identities=28% Similarity=0.401 Sum_probs=199.9
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+|...+.||+|+||.||+|... |..||+|.+.... ..+.+.+|+.++++++|+|++++++++... ....++++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceEEEEE
Confidence 46788889999999999999775 7889999985432 246788999999999999999999976544 344689999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.++++... ...+++..+.+++.|++.|++|||++ +|+||||||+||++++++.+|++|||+++..
T Consensus 81 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 81 YMAKGSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152 (256)
T ss_pred CCCCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceec
Confidence 999999999997643 34588999999999999999999999 9999999999999999999999999998754
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... ....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ........
T Consensus 153 ~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~------- 213 (256)
T cd05082 153 SSTQ-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVE------- 213 (256)
T ss_pred cccC-------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHh-------
Confidence 2211 11234568999999998889999999999999999998 9999864421 11111110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
....+. ....++..+.+++.+|++.+|++|||++++++.|+++
T Consensus 214 -----~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 214 -----KGYKMD--APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----cCCCCC--CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 000111 1123456789999999999999999999999998763
No 187
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1e-33 Score=318.34 Aligned_cols=259 Identities=23% Similarity=0.371 Sum_probs=205.6
Q ss_pred cCCCcCceecccCCceEEEEEecC----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.+|...+.||+|+||.||+|...+ ...||||...........+.+.+|+.++++++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CCcE
Confidence 457778899999999999996543 347999998766555566789999999999999999999998753 2358
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+
T Consensus 83 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~ 153 (270)
T cd05056 83 IVMELAPLGELRSYLQVN------KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGL 153 (270)
T ss_pred EEEEcCCCCcHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCce
Confidence 999999999999999764 24589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
++........ ......++..|+|||.+....++.++|||||||++||+++ |+.||......+. ..+..
T Consensus 154 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~~~------ 222 (270)
T cd05056 154 SRYLEDESYY---KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGRIE------ 222 (270)
T ss_pred eeecccccce---ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHH------
Confidence 8765332111 1112234568999999988889999999999999999986 9999976533211 11100
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
.. ...+.+..++.++.+++.+|+..+|++|||+.++++.|.++....
T Consensus 223 --------~~---~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 223 --------NG---ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred --------cC---CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00 011112234567999999999999999999999999999877643
No 188
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.9e-34 Score=315.94 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=199.6
Q ss_pred ceecccCCceEEEEEecC--C--cEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELAN--G--ATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|++|.||+|.+.+ + ..||||.+.........+.+.+|++++++++||||+++++++.. ...++|+||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEec
Confidence 368999999999997643 3 36999999765554566789999999999999999999998865 5579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.+..
T Consensus 78 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 78 PLGSLLDRLRKDA-----LGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred CCCcHHHHHHhcc-----cccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccc
Confidence 9999999998642 14689999999999999999999999 999999999999999999999999999987643
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
.... ........++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. ... ...
T Consensus 150 ~~~~-~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~--~~~---~~~-------- 215 (257)
T cd05040 150 NEDH-YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI--LKK---IDK-------- 215 (257)
T ss_pred cccc-eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH---HHh--------
Confidence 2211 111112456789999999998899999999999999999999 9999965433211 110 000
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.....+.+...+..+.+++.+|++.+|++|||++++++.|.
T Consensus 216 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 216 -----EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -----cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00111112234567899999999999999999999999875
No 189
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2e-34 Score=332.60 Aligned_cols=244 Identities=26% Similarity=0.328 Sum_probs=188.2
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHH-HHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVK-TLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||+||+|+. .+|+.||||++.... .....+.+..|.. +++.++||||+++++++.. ....++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcCC
Confidence 3699999999999954 578999999986432 2223345556655 4677899999999988754 44579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~ 148 (325)
T cd05604 79 NGGELFFHLQR-------ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA 148 (325)
T ss_pred CCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence 99999998875 35689999999999999999999999 999999999999999999999999999865321
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-----~~~~----------- 208 (325)
T cd05604 149 Q----SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM-----YDNI----------- 208 (325)
T ss_pred C----CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH-----HHHH-----------
Confidence 1 1122335789999999999999999999999999999999999999975422111 1110
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.... .......+..+.+++.+|++.||.+||++++.++.+
T Consensus 209 ~~~~----~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 209 LHKP----LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred HcCC----ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 0000 000111345678999999999999999987544433
No 190
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.1e-34 Score=341.53 Aligned_cols=268 Identities=22% Similarity=0.283 Sum_probs=193.1
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecC------C
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG------A 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~ 1017 (1251)
..+|...+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++.... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 45789999999999999999965 568999999985332 23457999999999999999998764321 1
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-CeEE
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-EAHL 1096 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl 1096 (1251)
...++||||++ +++.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~---~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYA---RNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceee
Confidence 23568999997 47877775321 1245689999999999999999999999 999999999999998664 7999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
+|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|++||.+....+. .......
T Consensus 213 ~DFGla~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~ 286 (440)
T PTZ00036 213 CDFGSAKNLLAGQ-----RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ-LVRIIQV 286 (440)
T ss_pred eccccchhccCCC-----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH
Confidence 9999998653221 12235689999999988654 689999999999999999999999976543221 1111111
Q ss_pred HHhccchhhhhh---hcccCCCCCC-------chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1176 HMEMSGSAREEL---LDDQMKPLLP-------GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1176 ~~~~~~~~~~~~---~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
............ ......+... .+...+.++.+++.+||+.||.+|||+.|+++.
T Consensus 287 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 287 LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 100000000000 0000000000 011134578899999999999999999999854
No 191
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.4e-34 Score=330.35 Aligned_cols=238 Identities=26% Similarity=0.333 Sum_probs=184.5
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHH-HHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVK-TLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
++||+|+||.||+|+. .+++.||+|++.... .......+.+|.. +++.++||||+++++++.. ....++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT--AEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 3699999999999965 468899999986432 1222344555554 5788899999999988754 44679999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|..++.. ...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (321)
T cd05603 79 NGGELFFHLQR-------ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE 148 (321)
T ss_pred CCCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCC
Confidence 99999998865 34678899999999999999999999 999999999999999999999999999865322
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
. ........||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ...+. .
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~-----------i 208 (321)
T cd05603 149 P----EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-----QMYDN-----------I 208 (321)
T ss_pred C----CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-----HHHHH-----------H
Confidence 1 11223357899999999999889999999999999999999999999754211 11111 0
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
... ....+.....++.+++.+|++.||.+||++.
T Consensus 209 ~~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 209 LHK----PLQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred hcC----CCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 110 0111112345688999999999999999864
No 192
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5e-34 Score=325.50 Aligned_cols=198 Identities=24% Similarity=0.333 Sum_probs=169.1
Q ss_pred cCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-C-----CCccceeceeeecCCC
Q 000859 946 NNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-H-----RHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~~~~~~ 1018 (1251)
.+|.+.+.||+|+||.|.+| +..+++.||||+++.+.. -..+...|+.+|..++ | -|+|+++++|... .
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~--f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr--~ 261 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR--FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR--N 261 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH--HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc--c
Confidence 37899999999999999999 677899999999964433 3455667999999996 4 4899999998654 4
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC--CCeEE
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN--MEAHL 1096 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl 1096 (1251)
..|||+|.+. -+|+++++.+. -..++...++.|+.||+.||.+||+. +|||+||||+|||+.+. ..|||
T Consensus 262 HlciVfELL~-~NLYellK~n~-----f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 262 HLCIVFELLS-TNLYELLKNNK-----FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred ceeeeehhhh-hhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 5699999996 49999999865 46699999999999999999999999 99999999999999654 36999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCcc
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATF 1163 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~ 1163 (1251)
+|||.|....... . .++.+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+..
T Consensus 333 IDFGSSc~~~q~v------y-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 333 IDFGSSCFESQRV------Y-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred EecccccccCCcc------e-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 9999997643221 1 3567899999999999999999999999999999999988887663
No 193
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.2e-33 Score=317.50 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=191.0
Q ss_pred eecccCCceEEEEEecC---CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 953 IIGSGGSGTVYKAELAN---GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
.||+|+||.||+|.+.+ +..+|+|.+...........+.+|+.++++++||||++++|++.+. ...++||||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--TPYLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--CCcEEEEECCCC
Confidence 58999999999996543 4579999987665555556788999999999999999999988554 446899999999
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
|+|.+++..... ......++..+.+++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++......
T Consensus 80 g~L~~~l~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 80 GDLKGYLRSCRK--AELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CcHHHHHHHhhh--cccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 999999975421 1123467788889999999999999999 99999999999999999999999999986543221
Q ss_pred CCCCcccceeecccceecccccccC-------CCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYSL-------KATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
. ........++..|+|||++.+. .++.++|||||||++|||++ |+.||......+.....+ ..
T Consensus 155 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~----~~--- 225 (269)
T cd05087 155 Y--YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV----RE--- 225 (269)
T ss_pred e--eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh----hc---
Confidence 1 1112234578899999987532 35789999999999999997 999997543322111000 00
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.. .....+.. ....+..+.+++..|| .+|++|||++||.+.|+
T Consensus 226 -~~----~~~~~~~~--~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 -QQ----LKLPKPRL--KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred -cc----CCCCCCcc--CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00 00001111 1123445788999999 68999999999998874
No 194
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.6e-34 Score=328.99 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=189.2
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~l 1022 (1251)
+|+..+.||+|+||+||+|.. .+|+.||+|++.... .....+.+..|..+++.+. |++|+++++++.. ....++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--VDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec--CCEEEE
Confidence 367778999999999999964 468999999986432 2223456778999988885 5777788876644 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++
T Consensus 79 v~Ey~~~g~L~~~i~~-------~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~ 148 (323)
T cd05615 79 VMEYVNGGDLMYHIQQ-------VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMC 148 (323)
T ss_pred EEcCCCCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccc
Confidence 9999999999999876 34689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ....
T Consensus 149 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-----~~~i------ 213 (323)
T cd05615 149 KEHMVD----GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL-----FQSI------ 213 (323)
T ss_pred cccCCC----CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH-----HHHH------
Confidence 753221 1112235689999999999998999999999999999999999999976532111 1110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS 1224 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1224 (1251)
.... ...+...+.++.+++.+|++.+|.+|++.
T Consensus 214 -----~~~~----~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 214 -----MEHN----VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----HhCC----CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0000 01112234567899999999999999985
No 195
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.8e-34 Score=326.76 Aligned_cols=267 Identities=19% Similarity=0.274 Sum_probs=197.7
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++|...+.||+|+||.||+|+. .+++.||+|++...........+.+|++++++++||||+++++++... ...++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD--KSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC--CeEEEEE
Confidence 5688889999999999999954 467899999987554444455678899999999999999999988653 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++ ++.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 84 e~~~~-~l~~~~~~~------~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 153 (309)
T cd07872 84 EYLDK-DLKQYMDDC------GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARA 153 (309)
T ss_pred eCCCC-CHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcccccee
Confidence 99975 898888654 34578999999999999999999999 999999999999999999999999999875
Q ss_pred cccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
..... .......+|..|+|||.+.+ ..++.++||||+||++|||+||+.||.+....+. ...............
T Consensus 154 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~ 228 (309)
T cd07872 154 KSVPT----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEET 228 (309)
T ss_pred cCCCc----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHH
Confidence 42211 11122467899999998765 4688999999999999999999999976533221 111111000000000
Q ss_pred h------hhhhcccCCCC-----CCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 R------EELLDDQMKPL-----LPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~------~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
. ....+....+. .......+.++.+++.+|++.||.+|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 229 WPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 00000000000 0001123456789999999999999999999986
No 196
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.3e-34 Score=319.92 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=197.9
Q ss_pred hhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCC----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA---- 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~---- 1017 (1251)
+...|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.+++++ +||||+++++++.....
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 345677888999999999999965 4688999999864432 345778999999998 79999999998875432
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++||||+++|+|.+++.... ...+++..+..++.|++.|++|||++ +|+|||+||+||++++++.+||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-----GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEc
Confidence 34689999999999999997632 34688999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRW 1172 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1172 (1251)
|||+++...... .......|+..|+|||++. +..++.++||||+||++|||++|+.||........ +
T Consensus 154 Dfg~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~----~ 225 (272)
T cd06637 154 DFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA----L 225 (272)
T ss_pred cCCCceeccccc----ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH----H
Confidence 999987643211 1223356889999999876 34578899999999999999999999965422111 0
Q ss_pred HHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1173 VEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.... .... ... .....+.++.+++.+||+.||.+|||++++++
T Consensus 226 ~~~~------------~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 226 FLIP------------RNPA-PRL-KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHh------------cCCC-CCC-CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000 0000 000 11123456889999999999999999999975
No 197
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9e-34 Score=332.10 Aligned_cols=267 Identities=24% Similarity=0.309 Sum_probs=197.0
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----C
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA----G 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~ 1018 (1251)
..+|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++..... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46789999999999999999954 568999999986442 33345677899999999999999999998764432 2
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++||||+++ ++.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc---------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 46899999975 66666542 378889999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
||+++..... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+....+. .....+....
T Consensus 167 fg~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~ 240 (359)
T cd07876 167 FGLARTACTN-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ-WNKVIEQLGT 240 (359)
T ss_pred CCCccccccC-----ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCC
Confidence 9999754221 112235789999999999999999999999999999999999999976532211 1000000000
Q ss_pred ccc-------hhhhhhhccc---------------CCC-CCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1179 MSG-------SAREELLDDQ---------------MKP-LLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1179 ~~~-------~~~~~~~~~~---------------~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... .......... ..+ ........+.++.+++.+|++.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 241 PSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred CcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 0000000000 000 000011134568899999999999999999999875
No 198
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.4e-33 Score=314.52 Aligned_cols=251 Identities=27% Similarity=0.407 Sum_probs=201.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK--GKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC--CEEEEEE
Confidence 367778999999999999965 468999999986432 344567889999999999999999999988654 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.
T Consensus 79 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~ 150 (256)
T cd08529 79 EYAENGDLHKLLKMQR-----GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKL 150 (256)
T ss_pred EeCCCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEccccccee
Confidence 9999999999998642 35689999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
+..... ......|+..|+|||+..+..++.++|+|||||++|||++|+.||......+ .. .
T Consensus 151 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~---~---------- 211 (256)
T cd08529 151 LSDNTN----FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LI---L---------- 211 (256)
T ss_pred ccCccc----hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HH---H----------
Confidence 543211 1123467889999999999899999999999999999999999997553211 00 0
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...... .+. .....+.++.+++.+||+.+|++||++.++++.
T Consensus 212 -~~~~~~-~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 212 -KIIRGV-FPP--VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -HHHcCC-CCC--CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000111 111 112345678999999999999999999999864
No 199
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-33 Score=317.27 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=206.4
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.+|+..+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+++++.++||||+++++++... ...++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~~ 79 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--NELNI 79 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC--CeEEE
Confidence 3577778999999999999964 578999999886432 233456888999999999999999999988654 45789
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
+|||+++++|.++++... .....+++..++.++.|+++|++|||++ +++|+||||+||+++.++.++++|||.+
T Consensus 80 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 153 (267)
T cd08229 80 VLELADAGDLSRMIKHFK---KQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEecCCCCHHHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhh
Confidence 999999999999987421 1235689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
....... .......|+..|+|||.+.+..++.++|+||||+++|||++|+.||.+...... ......
T Consensus 154 ~~~~~~~----~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~------ 220 (267)
T cd08229 154 RFFSSKT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---SLCKKI------ 220 (267)
T ss_pred hccccCC----cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH---HHhhhh------
Confidence 7653221 111234678899999999888899999999999999999999999865422111 111100
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
.. ...+.. .....+.++.+++.+||+.||++|||+.+|+++++++.
T Consensus 221 -----~~-~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 221 -----EQ-CDYPPL-PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -----hc-CCCCCC-CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00 001111 12235667999999999999999999999999998764
No 200
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1e-33 Score=316.56 Aligned_cols=256 Identities=28% Similarity=0.459 Sum_probs=204.4
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.++|.+.+.||+|+||.||+|...+++.||||.+..... ..+++.+|+.++++++|+||+++++++... ...++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE--EPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecC--CceEEEE
Confidence 457888899999999999999887788999999864332 346789999999999999999999987543 4469999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++|+||||+||++++++.+|++|||.++.
T Consensus 81 e~~~~~~L~~~i~~~~-----~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 81 EYMSKGSLLDFLKSGE-----GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARL 152 (261)
T ss_pred eccCCCCHHHHHhccc-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECcccccee
Confidence 9999999999997642 35689999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
+...... ......++..|+|||.+.+..++.++||||+||++||+++ |+.||.+..... . ....
T Consensus 153 ~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~---~~~~------- 217 (261)
T cd05034 153 IEDDEYT---AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE--V---LEQV------- 217 (261)
T ss_pred ccchhhh---hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--H---HHHH-------
Confidence 5432111 1112234578999999998889999999999999999999 999996542211 0 1100
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.. .. ..+.+...+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 218 ----~~-~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 218 ----ER-GY--RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred ----Hc-CC--CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 00 00 0111122356789999999999999999999999998763
No 201
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.4e-33 Score=316.03 Aligned_cols=254 Identities=26% Similarity=0.352 Sum_probs=200.1
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc----hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD----HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+.|...+.||+|++|.||+|.. .++++||+|.+..... ....+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD--ETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC--CeE
Confidence 4688889999999999999954 5689999999864432 12335788999999999999999999988654 467
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++|+||+++++|.+++... ..+++..+.+++.|++.|++|||+. +|+||||+|+||++++++.++|+|||
T Consensus 80 ~~v~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg 149 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAY-------GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 149 (263)
T ss_pred EEEEEECCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 9999999999999998763 4578899999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
.++........ ........|+..|+|||.+.+..++.++||||+|+++||+++|+.||......+... .
T Consensus 150 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~-------- 218 (263)
T cd06625 150 ASKRLQTICSS-GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIF--K-------- 218 (263)
T ss_pred cceeccccccc-cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHH--H--------
Confidence 98765332111 111122457889999999999889999999999999999999999997542211100 0
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.......+. .+...+..+.+++.+||+.+|++|||++|+++.
T Consensus 219 ------~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 ------IATQPTNPQ--LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------HhccCCCCC--CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000111 122345678899999999999999999999864
No 202
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-33 Score=324.52 Aligned_cols=267 Identities=23% Similarity=0.382 Sum_probs=205.6
Q ss_pred hcCCCcCceecccCCceEEEEEec--------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA--------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
..+|...+.||+|+||.||+|+.. ....||+|.+.........+.+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 345788899999999999999642 24579999987555545567788999999999 699999999988543
Q ss_pred CCCceeEEEeecCCCChHHhhhcCCCC---------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQPVN---------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNI 1086 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 1086 (1251)
...++||||+++|+|.+++...... ......+++.++.+++.|++.|++|||++ +|+||||||+||
T Consensus 91 --~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 91 --GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 4569999999999999999764311 11134689999999999999999999999 999999999999
Q ss_pred eecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCcccc
Q 000859 1087 LLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGV 1165 (1251)
Q Consensus 1087 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~ 1165 (1251)
+++.++.+||+|||.++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKK--TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred EEcCCCcEEEccccccccccccccccc--cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999976532211111 111234567999999988899999999999999999999 89998654221
Q ss_pred chhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1166 EMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
+. ..... .... ...+..++.++.+++.+||+.||++|||+.|+++.|.++...
T Consensus 244 ~~-----~~~~~------------~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 244 EL-----FKLLR------------EGHR--MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HH-----HHHHH------------cCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11 11000 0000 111122445788999999999999999999999999988753
No 203
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.9e-33 Score=314.19 Aligned_cols=262 Identities=23% Similarity=0.353 Sum_probs=207.2
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|+..+.||+|+||.||+|... +|+.||+|.++... .....+.+.+|++++++++|++++++++++... ...++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~--~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN--NELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC--CeEEE
Confidence 46888899999999999999665 79999999886422 333457888999999999999999999988654 45699
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.... .....+++.++..++.|+++|++|||+. +|+||||+|+||+++.++.++++|||.+
T Consensus 80 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~ 153 (267)
T cd08224 80 VLELADAGDLSRMIKHFK---KQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEecCCCCCHHHHHHHhc---ccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEecccee
Confidence 999999999999986532 1235689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+..+..
T Consensus 154 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~------ 220 (267)
T cd08224 154 RFFSSK----TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKI------ 220 (267)
T ss_pred eeccCC----CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhh------
Confidence 754321 1112234678899999999988899999999999999999999999864421 111111110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
... ..+..+ ....+..+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 221 -----~~~-~~~~~~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 221 -----EKC-DYPPLP-ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----hcC-CCCCCC-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000 011111 1235567899999999999999999999999998764
No 204
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.2e-34 Score=331.92 Aligned_cols=261 Identities=19% Similarity=0.239 Sum_probs=198.3
Q ss_pred HHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeec
Q 000859 939 EDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 939 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 1015 (1251)
.+.....++|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~- 114 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 114 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-
Confidence 33444567899999999999999999965 468899999986422 22334567889999999999999999988754
Q ss_pred CCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeE
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAH 1095 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 1095 (1251)
+...++||||+++|+|.++++. ..++...+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 115 -~~~~~lv~Ey~~gg~L~~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 115 -DRYLYMVMEYMPGGDLVNLMSN--------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred -CCEEEEEEcCCCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEE
Confidence 4567999999999999999875 2478888999999999999999999 999999999999999999999
Q ss_pred EcccccccccccccCCCCcccceeecccceecccccccC----CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHH
Q 000859 1096 LGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL----KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1171 (1251)
|+|||+++...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.....
T Consensus 183 L~DfG~a~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----- 254 (371)
T cd05622 183 LADFGTCMKMNKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----- 254 (371)
T ss_pred EEeCCceeEcCcCC---cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-----
Confidence 99999997653211 1112235799999999998754 37899999999999999999999997542211
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHH
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQE--RPSSRQVCDLL 1231 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~L 1231 (1251)
... .+........++.....+..+.+++.+|+..++.+ ||+++|+++..
T Consensus 255 ~~~-----------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 255 TYS-----------KIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHH-----------HHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 000 11110001112222234556789999999844433 78899888754
No 205
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.6e-33 Score=314.62 Aligned_cols=255 Identities=26% Similarity=0.441 Sum_probs=203.7
Q ss_pred hhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
...+|...+.||+|+||.||+|...++..||+|.+... ....+.+.+|++++++++|+||+++++++.. ...+++
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYII 78 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEEE
Confidence 34578889999999999999998777888999988643 2245678899999999999999999988754 446899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.+.. ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 79 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 79 TEFMAKGSLLDFLKSDE-----GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred EEeCCCCcHHHHHHhCC-----ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCccee
Confidence 99999999999997642 35678899999999999999999998 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
....... .......++..|+|||++....++.++|+|||||++||++| |+.||....... ...+..
T Consensus 151 ~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~-------- 217 (260)
T cd05073 151 VIEDNEY---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALE-------- 217 (260)
T ss_pred eccCCCc---ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHh--------
Confidence 6532211 11122345678999999988889999999999999999999 999997542211 111110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
... ..+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 218 -------~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 218 -------RGY--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -------CCC--CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000 011112344578899999999999999999999999875
No 206
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.3e-33 Score=314.51 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=197.7
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC----chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD----DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|...+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++........
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688889999999999999954 568999999986432 12234578899999999999999999998876555667
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++++||+++++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-------GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCC
Confidence 8999999999999999763 4578999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+++.......... ......++..|+|||.+.+..++.++||||+||++||+++|+.||......+. ..
T Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~-----~~------ 219 (266)
T cd06651 152 ASKRLQTICMSGT-GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA-----IF------ 219 (266)
T ss_pred CccccccccccCC-ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH-----HH------
Confidence 9876532211111 11224578999999999988899999999999999999999999975422111 00
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
........+.. +......+.+++ +||..+|++||+++||++
T Consensus 220 -----~~~~~~~~~~~--~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 220 -----KIATQPTNPQL--PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -----HHhcCCCCCCC--chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00000011111 222345567777 688899999999999975
No 207
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.4e-34 Score=334.64 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=193.4
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++..++||+|+++++.+.. ....++|
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~~~~~lv 79 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD--KRNLYLI 79 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEEE
Confidence 578889999999999999955 468999999996432 22334677889999999999999999988754 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++|+|.+++.+ .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~E~~~gg~L~~~l~~-------~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 80 MEFLPGGDMMTLLMK-------KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred EeCCCCccHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 999999999999976 34689999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCC-------------------------------CcccceeecccceecccccccCCCCCccceeehhHHHHHH
Q 000859 1104 ALVEDYNSN-------------------------------TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMEL 1152 (1251)
Q Consensus 1104 ~~~~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el 1152 (1251)
.+....... ........||+.|+|||++.+..++.++||||+||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel 229 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeec
Confidence 543211000 0001124799999999999999999999999999999999
Q ss_pred hhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 000859 1153 VSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS---SRQVCD 1229 (1251)
Q Consensus 1153 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~ 1229 (1251)
++|+.||.+....+.. ... ........++.....+.++.+++.+++ .||.+|++ ++|+++
T Consensus 230 ~tG~~Pf~~~~~~~~~-----~~i-----------~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 230 LIGYPPFCSETPQETY-----RKV-----------MNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred ccCCCCCCCCCHHHHH-----HHH-----------HcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 9999999765332110 000 000000011111123456778888876 49999986 555554
No 208
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.1e-33 Score=315.53 Aligned_cols=255 Identities=28% Similarity=0.423 Sum_probs=196.2
Q ss_pred eecccCCceEEEEEec-CCc--EEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEeecC
Q 000859 953 IIGSGGSGTVYKAELA-NGA--TVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
.||+|+||.||+|... ++. .+|+|.+.........+.+.+|+++++++ +||||+++++++... ...++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEEEeCC
Confidence 6899999999999764 343 57888886544444567888999999999 899999999988654 34699999999
Q ss_pred CCChHHhhhcCCCC---------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1029 NGSVWDWLHKQPVN---------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
+|+|.++++..... ......+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 99999999764311 01123588999999999999999999998 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|++...... ........+..|+|||++....++.++|||||||++|||++ |..||......+ .....
T Consensus 157 gl~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-----~~~~~-- 224 (270)
T cd05047 157 GLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKL-- 224 (270)
T ss_pred CCccccchh-----hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-----HHHHH--
Confidence 998532111 01111233567999999988889999999999999999997 999996542211 11100
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
...... +.+...+.++.+++.+||+.+|.+|||++++++.|.++++
T Consensus 225 ----------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~ 270 (270)
T cd05047 225 ----------PQGYRL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 270 (270)
T ss_pred ----------hCCCCC--CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence 000001 1112234568899999999999999999999999988753
No 209
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.2e-33 Score=317.19 Aligned_cols=259 Identities=25% Similarity=0.420 Sum_probs=205.7
Q ss_pred cCCCcCceecccCCceEEEEEec-CCc----EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGA----TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.+. +|+ .||+|...........+.+.+|+.++++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---Cce
Confidence 45788889999999999999654 333 6899988766555566788999999999999999999998864 456
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 84 ~~v~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg 154 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNH------KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFG 154 (279)
T ss_pred EEEEecCCCCcHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCc
Confidence 8999999999999999764 24589999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
.++......... ......++..|+|||.+....++.++|+|||||++||+++ |+.||.+....+. ...+ .
T Consensus 155 ~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~---~-- 225 (279)
T cd05057 155 LAKLLDVDEKEY--HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI--PDLL---E-- 225 (279)
T ss_pred ccccccCcccce--ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHH---h--
Confidence 998654221111 1111234678999999988889999999999999999999 9999976532111 1110 0
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.. ...+.+..++.++.+++.+||..||.+||++.++++.+.++...
T Consensus 226 ---------~~---~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 226 ---------KG---ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ---------CC---CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 00 01111222445688999999999999999999999999998653
No 210
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2e-33 Score=318.64 Aligned_cols=274 Identities=27% Similarity=0.411 Sum_probs=207.8
Q ss_pred CCCcCceecccCCceEEEEEec-----CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-----NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
+|...+.||+|+||.||+|.+. ++..||||++.........+.+.+|+++++.++||||+++++++...+....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4667789999999999999753 36889999997555434567899999999999999999999988765566679
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.
T Consensus 85 lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR------DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred EEEecCCCCCHHHHHHhCc------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccc
Confidence 9999999999999997642 3689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+......... ........++..|+|||......++.++||||||+++|||++|+.|+............-. ......
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--~~~~~~ 232 (284)
T cd05038 156 AKVLPEDKDY-YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA--QGQMIV 232 (284)
T ss_pred ccccccCCcc-eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc--cccccH
Confidence 9876422111 1111122445679999999888999999999999999999999999864322111000000 000000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
.......... ...+.+..++.++.+++.+||+.+|++|||++||+++|+.+
T Consensus 233 ~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 233 TRLLELLKEG--ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHcC--CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0001111111 11122233456799999999999999999999999999875
No 211
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-33 Score=326.66 Aligned_cols=269 Identities=23% Similarity=0.361 Sum_probs=208.0
Q ss_pred cCCCcCceecccCCceEEEEEec--------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecC
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA--------NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 1016 (1251)
.+|.+.+.||+|+||.||+|+.. .+..||+|.+.........+.+.+|+++++++ +||||++++++|...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD- 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC-
Confidence 45788899999999999999642 12379999987655555567899999999999 899999999988654
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCC---------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVN---------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNIL 1087 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 1087 (1251)
...++++||+++|+|.+++...... ......+++.++.+++.|++.|++|||+. +|+||||||+||+
T Consensus 91 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 166 (334)
T cd05100 91 -GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL 166 (334)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence 4579999999999999999764211 01234688999999999999999999999 9999999999999
Q ss_pred ecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccc
Q 000859 1088 LDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVE 1166 (1251)
Q Consensus 1088 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~ 1166 (1251)
++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred EcCCCcEEECCcccceeccccccc--ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999765322111 11112234578999999999999999999999999999998 889986542211
Q ss_pred hhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCcc
Q 000859 1167 MDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIV 1240 (1251)
Q Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~ 1240 (1251)
...... ..... +.+...+.++.+++.+||+.+|++|||+.|+++.|+++......
T Consensus 245 -----~~~~~~------------~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~~ 299 (334)
T cd05100 245 -----LFKLLK------------EGHRM--DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTST 299 (334)
T ss_pred -----HHHHHH------------cCCCC--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcCC
Confidence 111100 00011 11122345788999999999999999999999999999865443
No 212
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-33 Score=319.30 Aligned_cols=261 Identities=25% Similarity=0.404 Sum_probs=201.6
Q ss_pred cCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.+|...++||+|+||.||+|... ++..||+|.+... .....+.+.+|+++++.++|+||+++++++... ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTEG--RP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--Cc
Confidence 35777889999999999999532 3568999988643 344567899999999999999999999987654 44
Q ss_pred eeEEEeecCCCChHHhhhcCCCC--------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVN--------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN 1091 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~--------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 1091 (1251)
.+++|||+++|+|.+++...... ......+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 69999999999999999764311 11124589999999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHH
Q 000859 1092 MEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMV 1170 (1251)
Q Consensus 1092 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1170 (1251)
+.+||+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--- 233 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA--- 233 (280)
T ss_pred CCEEECCCCceeEcCCCcee--ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---
Confidence 99999999998754322111 11122345788999999999999999999999999999998 9999865432111
Q ss_pred HHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1171 RWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
.... .. ... ...+..++..+.+++.+||+.||.+||+++||.+.|+.
T Consensus 234 --~~~~-----------~~-~~~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 --IECI-----------TQ-GRE--LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred --HHHH-----------Hc-Ccc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0000 00 000 01112345678899999999999999999999998863
No 213
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.4e-34 Score=318.05 Aligned_cols=254 Identities=25% Similarity=0.339 Sum_probs=198.0
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.+|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.++++++||||+++++++... ...++||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~--~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSR--EKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--CEEEEEE
Confidence 4688899999999999999964 5788999999864432 2345678899999999999999999988654 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.++++. ...+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~ 155 (267)
T cd06646 86 EYCGGGSLQDIYHV-------TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAK 155 (267)
T ss_pred eCCCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCcccee
Confidence 99999999999875 34678999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+.... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||....+.+... ..
T Consensus 156 ~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--------~~-- 221 (267)
T cd06646 156 ITATI----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--------LM-- 221 (267)
T ss_pred ecccc----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--------ee--
Confidence 53221 1122346889999999874 3457889999999999999999999986442211100 00
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.... ...+........+..+.+++.+||+.||++||+++++++.+
T Consensus 222 -~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 222 -SKSN----FQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -ecCC----CCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0000 00011111122456788999999999999999999998754
No 214
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=322.59 Aligned_cols=254 Identities=25% Similarity=0.312 Sum_probs=208.6
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCch--hhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCce
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDH--LLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~ 1020 (1251)
...|...+.||+|.||.||+++.+ +|+.+|+|++.+.... ...+.+.+|+++|+++. |||||.++++|... ...
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--~~~ 111 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--DSV 111 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC--CeE
Confidence 445777789999999999999554 5999999999765532 24478999999999998 99999999998654 467
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC----CCeEE
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN----MEAHL 1096 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl 1096 (1251)
++|||++.||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+++... +.+|+
T Consensus 112 ~lvmEL~~GGeLfd~i~~~--------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~ 180 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK--------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKL 180 (382)
T ss_pred EEEEEecCCchHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEE
Confidence 9999999999999999763 389999999999999999999999 99999999999999643 57999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
+|||+|..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+........
T Consensus 181 ~DFGla~~~~~-----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~------- 248 (382)
T KOG0032|consen 181 IDFGLAKFIKP-----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL------- 248 (382)
T ss_pred eeCCCceEccC-----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------
Confidence 99999987643 233445799999999999999999999999999999999999999998764322211
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.+....+.-..+..........+++..|+..||.+|+|++++++.-+
T Consensus 249 ---------~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 249 ---------AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred ---------HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 11111112222334455677889999999999999999999999643
No 215
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.2e-33 Score=320.97 Aligned_cols=268 Identities=25% Similarity=0.325 Sum_probs=194.7
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhc---cCCCccceeceeeecC---CC
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRI---RHRHLVKLMGHCCNKG---AG 1018 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~---~~ 1018 (1251)
+|+..+.||+|+||+||+|.. .+++.||+|.+...... .....+.+|+++++.+ +||||+++++++.... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 477888999999999999954 47899999998654322 1234556777777766 6999999999876432 23
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++||||++ ++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP-----PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 4689999997 58999987642 34589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
||+++...... ......||..|+|||++.+..++.++||||+||++|||++|++||.+....+. ..........
T Consensus 152 fg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~ 225 (288)
T cd07863 152 FGLARIYSCQM-----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGL 225 (288)
T ss_pred cCccccccCcc-----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHHHhCC
Confidence 99997653221 11224678999999999988999999999999999999999999975433211 1111111000
Q ss_pred ccc-hhhhh--hhcccCCCCCC-----chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1179 MSG-SAREE--LLDDQMKPLLP-----GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1179 ~~~-~~~~~--~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... .+... .......+..+ .....+.++.+++.+|++.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 226 PPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00000 00000000000 01123456789999999999999999999875
No 216
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.3e-33 Score=321.36 Aligned_cols=264 Identities=27% Similarity=0.407 Sum_probs=202.2
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|+||.||+|.. .++..||+|.+.........+.+.+|++++++++||||+++++++.. +...++|||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 79 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISICME 79 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEEee
Confidence 588889999999999999964 46888999998765455556778899999999999999999998865 445799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|+++++|.++++.. +.+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++..
T Consensus 80 y~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 80 HMDGGSLDQVLKKA-------GRIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred ccCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCCccc
Confidence 99999999999763 468899999999999999999997 5 899999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch--
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS-- 1182 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1182 (1251)
.... ......|+..|+|||.+.+..++.++|+|||||++|||++|+.||....... ...+..........
T Consensus 150 ~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~ 221 (308)
T cd06615 150 LIDS------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE--LEAMFGRPVSEGEAKE 221 (308)
T ss_pred cccc------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh--HHHhhcCccccccccC
Confidence 4221 1123468899999999988889999999999999999999999986543211 11111100000000
Q ss_pred ----------------hhhhhhc---ccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1183 ----------------AREELLD---DQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1183 ----------------~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
...+..+ ....+..+. ...+.++.+++.+|++.||++|||++++++.-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 222 SHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS-GAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CcccccCCCCCccchhhHHHHHHHHhcCCCccCcC-cccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000 001111111 12456789999999999999999999998764
No 217
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.2e-33 Score=330.40 Aligned_cols=268 Identities=23% Similarity=0.295 Sum_probs=197.6
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC---Ccee
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---GSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---~~~~ 1021 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++.++||||+++++++..... ...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477888999999999999964 578999999986432 23345678899999999999999999998865431 1468
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|+||+. ++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 lv~e~~~-~~l~~~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 149 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS-------PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGL 149 (372)
T ss_pred EEeeccc-cCHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccc
Confidence 9999996 588888765 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh--
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME-- 1178 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 1178 (1251)
++...... ........+|..|+|||.+.+. .++.++||||+||++|||++|+.||.+....+. ...+.....
T Consensus 150 a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~g~~ 224 (372)
T cd07853 150 ARVEEPDE---SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ--LDLITDLLGTP 224 (372)
T ss_pred eeecccCc---cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCCC
Confidence 97643221 1112234678999999998764 478999999999999999999999976543211 110000000
Q ss_pred -------ccchhhhhhhcccCCCC-----CCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1179 -------MSGSAREELLDDQMKPL-----LPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1179 -------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
........+......+. .......+.++.+++.+|++.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 225 SLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000111111100000 00011134568899999999999999999999864
No 218
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.6e-33 Score=316.45 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=189.1
Q ss_pred eecccCCceEEEEEecC---CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 953 IIGSGGSGTVYKAELAN---GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
.||+|+||+||+|...+ ...||+|.+...........+.+|+++++.++||||++++|++... ...++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--IPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--CceEEEEEeCCC
Confidence 58999999999996543 3578899876555555567788999999999999999999988643 457999999999
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
|+|.+++..... ......++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 80 g~L~~~l~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 80 GDLKNYLRSNRG--MVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CcHHHHHHhccc--cccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccch
Confidence 999999976431 1123356788899999999999999999 99999999999999999999999999986542221
Q ss_pred CCCCcccceeecccceeccccccc-------CCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYS-------LKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
.. .......++..|+|||+... ..++.++||||+||++|||++ |..||....+.+. ......
T Consensus 155 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~------- 224 (269)
T cd05042 155 YY--ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-LKQVVR------- 224 (269)
T ss_pred he--eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-HHHHhh-------
Confidence 11 11122345778999998643 356889999999999999999 7888865432211 000000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
....... .+ ......+..+.+++..|| .||++|||+++|++.+.
T Consensus 225 ~~~~~~~----~~--~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 225 EQDIKLP----KP--QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccCccCC----CC--cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0000000 01 111224456778999999 59999999999998873
No 219
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-35 Score=321.84 Aligned_cols=249 Identities=22% Similarity=0.326 Sum_probs=199.1
Q ss_pred CcCceecccCCceEEEEEecC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 949 SDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 949 ~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
.+...||.|+||.||+|..++ +--.|.|++..+ .+...++|.-|++|+..++||+||++++.|..+ ...|++.|||
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy~e--nkLwiliEFC 111 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYYFE--NKLWILIEFC 111 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--CceEEEEeec
Confidence 334469999999999996553 445677777544 445678999999999999999999999977543 4579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
.||-....+-+- ++.+++.++..+++|++.|+.|||+. .|||||+|+.|||++-+|.++++|||.+.....
T Consensus 112 ~GGAVDaimlEL------~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLEL------GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred CCchHhHHHHHh------ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh
Confidence 999888877654 57899999999999999999999999 999999999999999999999999998854322
Q ss_pred ccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.......+.||+.|||||++. ..+|+.++||||||+++.||..+.+|.....+...-+.
T Consensus 183 ----t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK------------ 246 (1187)
T KOG0579|consen 183 ----TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK------------ 246 (1187)
T ss_pred ----HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH------------
Confidence 222334579999999999865 56799999999999999999999999765433211110
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
+...-.|.+-.+..+...+.+++..|+.++|..||+++++++.
T Consensus 247 -----iaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 247 -----IAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred -----HhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 0111123344566678889999999999999999999998764
No 220
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-33 Score=330.91 Aligned_cols=268 Identities=22% Similarity=0.287 Sum_probs=198.2
Q ss_pred hhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---- 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---- 1017 (1251)
...+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346799999999999999999954 468999999986543 33345677889999999999999999998764322
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++||||+++ ++.+++.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 246899999975 67776643 478889999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
|||+++..... .......||..|+|||++.+..++.++||||+||++|||++|+.||.+....+. ....++...
T Consensus 162 Dfg~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~ 235 (355)
T cd07874 162 DFGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLG 235 (355)
T ss_pred eCcccccCCCc-----cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhC
Confidence 99999754321 112235789999999999998999999999999999999999999976532211 111111000
Q ss_pred hcc-------chhhhhhhccc-----------C-CCCCC----chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1178 EMS-------GSAREELLDDQ-----------M-KPLLP----GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~-------~~~~~~~~~~~-----------~-~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... ......+.... . ....+ .......++.+++.+|++.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 00000000000 0 00000 111134567899999999999999999999985
No 221
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.8e-33 Score=321.48 Aligned_cols=259 Identities=26% Similarity=0.430 Sum_probs=203.4
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCc----EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGA----TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.+ .+|+ .||+|.+...........+.+|+.+++.++||||++++|+|... ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---Cc
Confidence 4577888999999999999965 3444 57999887655555556788999999999999999999988543 24
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++++||+++|+|.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 84 ~~v~e~~~~g~l~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg 154 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEH------KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFG 154 (303)
T ss_pred eeeehhcCCCCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccc
Confidence 7999999999999998764 24678999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+++.+...... .......++..|+|||.+.+..++.++|||||||++||+++ |+.||.+....+ ...+..
T Consensus 155 ~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--~~~~~~----- 225 (303)
T cd05110 155 LARLLEGDEKE--YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--IPDLLE----- 225 (303)
T ss_pred ccccccCcccc--cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH-----
Confidence 99865322111 11112345778999999998899999999999999999998 999987542211 111110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
.. ...+.+..++..+.+++..||..+|++||+++++++.+.++.+.
T Consensus 226 ----------~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 226 ----------KG--ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ----------CC--CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 01111222345688999999999999999999999999987644
No 222
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.5e-33 Score=312.38 Aligned_cols=255 Identities=29% Similarity=0.474 Sum_probs=202.6
Q ss_pred ceecccCCceEEEEEecC----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAELAN----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|.... +..||+|++.........+.+.+|+++++.++|+||+++++++.. ....++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEEec
Confidence 369999999999996653 789999999766554456788999999999999999999998865 45579999999
Q ss_pred CCCChHHhhhcCCCC--cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1028 ENGSVWDWLHKQPVN--IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
++++|.+++...... ......+++.++++++.|+++|++|||++ +|+||||||+||++++++.+|++|||.++..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 999999999864210 01125789999999999999999999999 9999999999999999999999999999876
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... ........++..|+|||.+....++.++||||+||++|||++ |..||......+ ..+...
T Consensus 156 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~------- 221 (262)
T cd00192 156 YDDDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-----VLEYLR------- 221 (262)
T ss_pred ccccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHH-------
Confidence 43221 122233467889999999988889999999999999999999 699997652211 111110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
. . .....+...+.++.+++.+|++.+|++|||++|+++.|+
T Consensus 222 ----~-~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 ----K-G--YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----c-C--CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 0 111122234667999999999999999999999998873
No 223
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.1e-33 Score=321.42 Aligned_cols=203 Identities=23% Similarity=0.375 Sum_probs=163.9
Q ss_pred ceecccCCceEEEEEec---CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 952 FIIGSGGSGTVYKAELA---NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
.+||+|+||+||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++........++|+||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 47999999999999754 457899999864332 346778999999999999999999887666667899999986
Q ss_pred CCChHHhhhcCCCC--cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee----cCCCCeEEcccccc
Q 000859 1029 NGSVWDWLHKQPVN--IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL----DSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a 1102 (1251)
++|.+++...... ......+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5888887643211 11234588999999999999999999999 99999999999999 56789999999999
Q ss_pred cccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDAT 1162 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~ 1162 (1251)
+.+...... ........||..|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 160 ~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCccc-ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 865432211 112233578999999999876 45899999999999999999999999643
No 224
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=342.19 Aligned_cols=266 Identities=20% Similarity=0.280 Sum_probs=192.7
Q ss_pred HHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccC------CCccceeceee
Q 000859 941 IMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRH------RHLVKLMGHCC 1013 (1251)
Q Consensus 941 ~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~g~~~ 1013 (1251)
+.....+|++.++||+|+||+||+|.. .+++.||||+++... .....+..|+++++.++| .+++++++++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 344567899999999999999999954 568899999985322 223455678888777754 45888888776
Q ss_pred ecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCC
Q 000859 1014 NKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1014 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
.. ....++|||++ +++|.+++.+ .+.+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 202 ~~-~~~~~iv~~~~-g~~l~~~l~~-------~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 202 NE-TGHMCIVMPKY-GPCLLDWIMK-------HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSD 269 (467)
T ss_pred cC-CceEEEEEecc-CCCHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCC
Confidence 44 34578999988 7789998876 3468999999999999999999997 5 899999999999998765
Q ss_pred ----------------CeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCC
Q 000859 1093 ----------------EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGK 1156 (1251)
Q Consensus 1093 ----------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~ 1156 (1251)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 270 ~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 270 TVVDPVTNRALPPDPCRVRICDLGGCCDER-------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred cccccccccccCCCCceEEECCCCccccCc-------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence 49999999875321 1123357899999999999999999999999999999999999
Q ss_pred CCCCCccccchhHHHHHHHHH-hccchhh--------hhhhccc--CCCCC-------------CchHHHHHHHHHHHHH
Q 000859 1157 MPTDATFGVEMDMVRWVEMHM-EMSGSAR--------EELLDDQ--MKPLL-------------PGEECAAYQVLEIALQ 1212 (1251)
Q Consensus 1157 ~p~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~--~~~~~-------------~~~~~~~~~l~~li~~ 1212 (1251)
.||++....+. ...+.... .....+. ..+++.. ..+.. .........+.+|+.+
T Consensus 343 ~pf~~~~~~~~--~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~ 420 (467)
T PTZ00284 343 LLYDTHDNLEH--LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYG 420 (467)
T ss_pred CCCCCCChHHH--HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHH
Confidence 99976543211 11111000 0000000 0000000 00000 0011124567899999
Q ss_pred ccccCCCCCCCHHHHHH
Q 000859 1213 CTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1213 cl~~dP~~RPs~~eil~ 1229 (1251)
||+.||++|||++|+++
T Consensus 421 mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 421 LLHYDRQKRLNARQMTT 437 (467)
T ss_pred hCCcChhhCCCHHHHhc
Confidence 99999999999999987
No 225
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.3e-33 Score=311.43 Aligned_cols=251 Identities=28% Similarity=0.450 Sum_probs=202.6
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++.. ....++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeEEEE
Confidence 346788889999999999999875 89999999965443 45788999999999999999999998765 44579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.++++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 80 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 80 EYMAKGSLVDYLRSRG-----RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred EecCCCcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccc
Confidence 9999999999997642 34689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... ...++..|+|||.+....++.++||||+|+++||+++ |+.||......+ .....
T Consensus 152 ~~~~~~-------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~---------- 212 (256)
T cd05039 152 ASQGQD-------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHV---------- 212 (256)
T ss_pred cccccc-------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH----------
Confidence 522111 1234568999999988889999999999999999998 999986542211 10000
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
....... .+...+.++.+++.+|++.+|++|||++|++++|+++
T Consensus 213 -----~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 213 -----EKGYRME--APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -----hcCCCCC--CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0001111 1122456789999999999999999999999998753
No 226
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-33 Score=318.86 Aligned_cols=251 Identities=23% Similarity=0.362 Sum_probs=200.6
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|+..+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++.+.. ....++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEEe
Confidence 35688888999999999999964 57899999998754433 34678899999999999999999998865 3467999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 96 ~e~~~~~~L~~~~~~--------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 96 MEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred ecccCCCCHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 999999999999865 2478899999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+... +....
T Consensus 165 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----~~~~~------- 229 (296)
T cd06654 165 QITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLIA------- 229 (296)
T ss_pred hccccc----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----HHHHh-------
Confidence 643221 111224678999999999988899999999999999999999999975432111 10000
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. ..+..+.+...+..+.+++.+||..||++||+++++++.
T Consensus 230 ----~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 230 ----TN--GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ----cC--CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 00 001111223345668899999999999999999999874
No 227
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.3e-33 Score=315.34 Aligned_cols=255 Identities=27% Similarity=0.432 Sum_probs=198.0
Q ss_pred eecccCCceEEEEEecC-------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 953 IIGSGGSGTVYKAELAN-------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.||+|+||.||+|+..+ ++.||||.+...........+.+|+++++.++||||+++++++... ...++|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~e 79 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN--EPQYIIME 79 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC--CCeEEEEe
Confidence 68999999999996542 2579999986555444567889999999999999999999988543 45799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-----CeEEcccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-----EAHLGDFG 1100 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~~kl~DfG 1100 (1251)
|+++|+|.+++............+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .+|++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999976432111234578999999999999999999998 999999999999999887 89999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+++......... ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+.
T Consensus 157 ~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~~~~----- 227 (269)
T cd05044 157 LARDIYKSDYYR--KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQHVT----- 227 (269)
T ss_pred cccccccccccc--cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHHHHh-----
Confidence 997653321111 1112345678999999999999999999999999999998 999986542211 111110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
.. .....+...+..+.+++.+||+.+|.+||+++++++.|.+
T Consensus 228 ----------~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 ----------AG--GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----------cC--CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 0111122345678999999999999999999999998863
No 228
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.3e-33 Score=317.59 Aligned_cols=252 Identities=23% Similarity=0.262 Sum_probs=194.9
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|+..+.||+|+||+||+|.. .+++.||+|.+..... ....+.+.+|++++++++|++|+++++++... ...++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~ 79 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK--DALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC--CEEEEEE
Confidence 56677899999999999955 5789999999864331 22335678899999999999999999877543 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 80 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~ 151 (285)
T cd05632 80 TIMNGGDLKFHIYNMG-----NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVK 151 (285)
T ss_pred EeccCccHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCccee
Confidence 9999999998886532 34689999999999999999999999 999999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... .......|+..|+|||.+.+..++.++|+||+||++||+++|+.||.+...... ...+......
T Consensus 152 ~~~~-----~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~~~~------ 219 (285)
T cd05632 152 IPEG-----ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRRVLE------ 219 (285)
T ss_pred cCCC-----CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhhc------
Confidence 4221 111234689999999999988999999999999999999999999975432111 1111100000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~ 1230 (1251)
.........+.++.+++..|++.||++||+ ++++++.
T Consensus 220 ---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 220 ---------TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ---------cccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 000011123456789999999999999999 6666654
No 229
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.8e-33 Score=312.71 Aligned_cols=238 Identities=22% Similarity=0.368 Sum_probs=185.3
Q ss_pred eecccCCceEEEEEecC-------------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 953 IIGSGGSGTVYKAELAN-------------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.||+|+||.||+|.+.+ ...||+|++.... ....+.+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~--~~ 78 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRD--VE 78 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CC
Confidence 58999999999997532 2358999875433 33456788899999999999999999988654 34
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC------
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME------ 1093 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~------ 1093 (1251)
.++||||+++|+|..++... ...+++..+.+++.||++||+|||++ +|+||||||+||+++.++.
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRK------SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred CEEEEecccCCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCc
Confidence 58999999999999988753 34589999999999999999999999 9999999999999987664
Q ss_pred -eEEcccccccccccccCCCCcccceeecccceecccccc-cCCCCCccceeehhHHHHHHh-hCCCCCCCccccchhHH
Q 000859 1094 -AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAY-SLKATEKCDVYSMGIVLMELV-SGKMPTDATFGVEMDMV 1170 (1251)
Q Consensus 1094 -~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGv~l~el~-tg~~p~~~~~~~~~~~~ 1170 (1251)
+|++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.||......+..
T Consensus 150 ~~~l~d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-- 219 (262)
T cd05077 150 FIKLSDPGIPITVLSR--------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-- 219 (262)
T ss_pred eeEeCCCCCCccccCc--------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH--
Confidence 899999998654211 1235788899999886 567899999999999999998 588888654221110
Q ss_pred HHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1171 RWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.. ...... .......++.+++.+||+.||.+||++++|++.+
T Consensus 220 ----~~-----------~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 ----RF-----------YEGQCM----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ----HH-----------HhcCcc----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 000000 0111235688999999999999999999999876
No 230
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.2e-33 Score=315.58 Aligned_cols=251 Identities=28% Similarity=0.442 Sum_probs=196.7
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..++||+|+||.||+|. ..+++.||+|++.........+.+.+|++++++++||||+++++++... ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEEEEEEe
Confidence 57778899999999999995 4578999999987554444557789999999999999999999988664 45689999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++..+
T Consensus 80 ~~~~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 80 FMDGGSLDVYR-----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL 145 (279)
T ss_pred cCCCCChHHhh-----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence 99999986542 357888899999999999999999 9999999999999999999999999999765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
... ......||..|+|||++.+..++.++||||+||++|||++|+.||........... +.+. ..
T Consensus 146 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~--------~~ 210 (279)
T cd06619 146 VNS------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-PLQL--------LQ 210 (279)
T ss_pred ccc------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-hHHH--------HH
Confidence 321 12234789999999999988999999999999999999999999975432221110 0000 00
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...+. ..+..+ ....+.++.+++.+|++.+|++||+++|+++.
T Consensus 211 ~~~~~-~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 211 CIVDE-DPPVLP-VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHhcc-CCCCCC-CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00010 011111 11234568899999999999999999999875
No 231
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.3e-33 Score=329.41 Aligned_cols=267 Identities=22% Similarity=0.269 Sum_probs=197.5
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecC----CC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG----AG 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~ 1018 (1251)
..+|...+.||+|+||.||+|. ..+++.||||++.... .....+.+.+|+.+++.++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 4678999999999999999995 4568899999986542 2334567789999999999999999999875432 23
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++||||+++ ++.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh---------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 46899999975 77777643 378889999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
||+++..... .......||..|+|||++.+..++.++||||+||++|||++|+.||.+....+. .....+....
T Consensus 170 fG~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 243 (364)
T cd07875 170 FGLARTAGTS-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGT 243 (364)
T ss_pred CCCccccCCC-----CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCC
Confidence 9999764321 112234689999999999999999999999999999999999999976543221 1111110000
Q ss_pred cc-------chh---------------hhhhhcccCCCCC-CchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1179 MS-------GSA---------------REELLDDQMKPLL-PGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1179 ~~-------~~~---------------~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. ... ..........+.. ........++.+++.+|++.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000 0000000000000 0011123568899999999999999999999875
No 232
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-34 Score=321.63 Aligned_cols=246 Identities=24% Similarity=0.402 Sum_probs=194.6
Q ss_pred CceecccCCceEEEE-EecCCcEEE---EEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 951 EFIIGSGGSGTVYKA-ELANGATVA---VKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~-~~~~~~~va---vK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
..+||+|+|-+||+| +-.+|-+|| ||.-....++...+.|..|+.+|+.++|||||++|.++.+.......+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 347999999999999 555677777 3332223355566899999999999999999999999888777778899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCeEEccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~ 1105 (1251)
+..|+|..|+++. +.+....++.+++||++||.|||++ .|+|+|||||.+||+|+. .|.|||+|+|+|+..
T Consensus 125 ~TSGtLr~Y~kk~-------~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 125 FTSGTLREYRKKH-------RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred ccCCcHHHHHHHh-------ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 9999999999984 5788899999999999999999997 679999999999999975 599999999999875
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
... .....+|||.|||||... ..|++.+||||||+.++||.|+..||..=.+..--+++ .......
T Consensus 197 r~s------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKK-------V~SGiKP 262 (632)
T KOG0584|consen 197 RKS------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKK-------VTSGIKP 262 (632)
T ss_pred hcc------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHH-------HHcCCCH
Confidence 322 122368999999999765 78999999999999999999999999632221110100 0011111
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..+. ....+++.+||.+|+.. ..+|||+.|+++
T Consensus 263 ~sl~----------kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 263 AALS----------KVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHhh----------ccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1111 11246799999999999 999999999875
No 233
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-34 Score=324.23 Aligned_cols=282 Identities=24% Similarity=0.333 Sum_probs=214.5
Q ss_pred cCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecC----CCceeEEE
Q 000859 950 DEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG----AGSNLLIY 1024 (1251)
Q Consensus 950 ~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~~~lv~ 1024 (1251)
..+.||+||||.||+|+ ..+|+.||||.++........+...+|++++++++|||||++.+.-.... .....+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 34579999999999997 66899999999987666667788999999999999999999998654443 34468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec--CCC--CeEEcccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD--SNM--EAHLGDFG 1100 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~--~~kl~DfG 1100 (1251)
|||.+|||...|.+.. ....+++.+.+.+..+++.||.|||++ +||||||||.||++- .+| .-||+|||
T Consensus 97 EyC~gGsL~~~L~~PE----N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPE----NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eecCCCcHHHHhcCcc----cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 9999999999998753 367899999999999999999999999 999999999999983 334 47999999
Q ss_pred cccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhH-HHHHHHHHh
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDM-VRWVEMHME 1178 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~ 1178 (1251)
.|+.+.++. .....+||..|.+||.... ..|+..+|.|||||++||++||..||....+..... ..|......
T Consensus 170 ~Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkk 244 (732)
T KOG4250|consen 170 AARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKK 244 (732)
T ss_pred ccccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccC
Confidence 999875432 3345799999999999884 889999999999999999999999998766553211 122222221
Q ss_pred ccchhhhhhhcc----cCCCCCCc----hHHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHhhcCCCccccc
Q 000859 1179 MSGSAREELLDD----QMKPLLPG----EECAAYQVLEIALQCTKTSPQERP--SSRQVCDLLLNVFNNRIVDFD 1243 (1251)
Q Consensus 1179 ~~~~~~~~~~~~----~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RP--s~~eil~~L~~~~~~~~~~~~ 1243 (1251)
..+......... .+...+|. .......+..++..++..+|.+|. .+.+....+.++++...+-..
T Consensus 245 p~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvhiF 319 (732)
T KOG4250|consen 245 PSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVHIF 319 (732)
T ss_pred CCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeEEE
Confidence 111110000000 01111222 122445567788889999999999 888888888888877666544
No 234
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=5.8e-33 Score=311.20 Aligned_cols=254 Identities=24% Similarity=0.325 Sum_probs=198.2
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC----chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD----DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|++++++++||||+++++++.+......
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999954 568999999985432 12334678889999999999999999998766545567
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
+++|||+++|+|.+++... ..+++..+.+++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg 151 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-------GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFG 151 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCc
Confidence 8999999999999998753 4578889999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
.++......... .......|+..|+|||.+.+..++.++|||||||++||+++|+.||........ ..
T Consensus 152 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~------- 219 (265)
T cd06652 152 ASKRLQTICLSG-TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA----IF------- 219 (265)
T ss_pred cccccccccccc-cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH----HH-------
Confidence 987653221111 111224588899999999888899999999999999999999999964421110 00
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
........+.. +......+.+++.+|+. +|++||+++|+++
T Consensus 220 -----~~~~~~~~~~~--~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 220 -----KIATQPTNPVL--PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -----HHhcCCCCCCC--chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00000011111 22345568889999995 9999999999875
No 235
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.5e-33 Score=317.21 Aligned_cols=252 Identities=24% Similarity=0.288 Sum_probs=196.1
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|+..+.||+|+||.||+|.. .+++.||||.+..... ....+.+.+|+.++++++|++|+++++.+... ...++||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~ 79 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK--DALCLVL 79 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC--CEEEEEE
Confidence 66778899999999999954 4789999999864432 22235577899999999999999999987553 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 80 e~~~g~~L~~~l~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05630 80 TLMNGGDLKFHIYHMG-----EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVH 151 (285)
T ss_pred EecCCCcHHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceee
Confidence 9999999999986532 34589999999999999999999998 999999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... ......|+..|+|||++.+..++.++||||+||++|||++|+.||........ .... .... ....
T Consensus 152 ~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~-~~~~---~~~~ 221 (285)
T cd05630 152 VPEGQ-----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEV-ERLV---KEVQ 221 (285)
T ss_pred cCCCc-----cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHH-Hhhh---hhhh
Confidence 43211 11224689999999999999999999999999999999999999975432111 0000 0000 0000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~ 1230 (1251)
. . .....++++.+++.+||+.||++||| ++|+++.
T Consensus 222 ~---------~--~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 222 E---------E--YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred h---------h--cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 0 0 01123456889999999999999999 8888873
No 236
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.7e-33 Score=310.33 Aligned_cols=249 Identities=29% Similarity=0.444 Sum_probs=201.7
Q ss_pred cCCCcCceecccCCceEEEEEecC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++|+..+.||+|+||.||+|...+ ++.||+|.+..... .+.+.+|++++++++||||+++++++... ...++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKN--TDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecC--CcEEEEE
Confidence 568888899999999999997654 78999999864322 57899999999999999999999988654 5579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+..
T Consensus 78 e~~~~~~L~~~l~~~------~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~ 148 (256)
T cd06612 78 EYCGAGSVSDIMKIT------NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQ 148 (256)
T ss_pred ecCCCCcHHHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchh
Confidence 999999999998753 35689999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 149 ~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--------------- 209 (256)
T cd06612 149 LTDTM----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--------------- 209 (256)
T ss_pred cccCc----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh---------------
Confidence 53321 11223457889999999998899999999999999999999999997542221100
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.......+....+...+..+.+++.+||+.||++|||++|+++
T Consensus 210 --~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 210 --MIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --hhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000111122223334567899999999999999999999985
No 237
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3e-33 Score=323.37 Aligned_cols=256 Identities=22% Similarity=0.281 Sum_probs=193.7
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|++.+.||+|+||+||+++. .+++.||+|++.... .....+.+.+|+.+++.++|+||+++++++.. +...++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD--ENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--CCeEEE
Confidence 3688889999999999999964 468999999986422 22334568889999999999999999998754 456799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.+. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 149 (331)
T cd05597 79 VMDYYVGGDLLTLLSKF------EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSC 149 (331)
T ss_pred EEecCCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCce
Confidence 99999999999999753 34688999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceeccccccc-----CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYS-----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
..+.... ........||+.|+|||++.. ..++.++||||+||++|||++|+.||.+....+. .....
T Consensus 150 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-----~~~i~ 221 (331)
T cd05597 150 LRLLADG---TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-----YGKIM 221 (331)
T ss_pred eecCCCC---CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH-----HHHHH
Confidence 7653221 111223468999999999863 4578899999999999999999999975422111 11000
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCC--CCCCHHHHHHH
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQ--ERPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~eil~~ 1230 (1251)
. . .......+.....+.++.+++.+|+..+++ .||+++++++.
T Consensus 222 ~--~--------~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 222 N--H--------KEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred c--C--------CCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0 0 000011111112455678889887765443 37899988876
No 238
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.3e-33 Score=319.33 Aligned_cols=268 Identities=21% Similarity=0.270 Sum_probs=197.5
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.++|...+.||+|+||.||+|.. .+++.||+|.+...........+.+|++++++++||||+++++++.. +...++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec--CCeEEEE
Confidence 35688889999999999999965 46889999998755444444567889999999999999999998854 4457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++ ++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 83 ~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 152 (301)
T cd07873 83 FEYLD-KDLKQYLDDC------GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLAR 152 (301)
T ss_pred Eeccc-cCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchh
Confidence 99997 5999988754 34678999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
...... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+. ..............
T Consensus 153 ~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~ 227 (301)
T cd07873 153 AKSIPT----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-LHFIFRILGTPTEE 227 (301)
T ss_pred ccCCCC----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCChh
Confidence 542211 11122356889999998765 4578899999999999999999999976533211 00000000000000
Q ss_pred hhhhhhccc-----CCCCCC------chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 AREELLDDQ-----MKPLLP------GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~~~~~-----~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
....+.... ..+... .....++.+.+++.+|++.||.+|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 228 TWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000 000000 01123456889999999999999999999986
No 239
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.9e-33 Score=324.85 Aligned_cols=265 Identities=22% Similarity=0.328 Sum_probs=196.5
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---- 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---- 1017 (1251)
..++|...+.||+|+||+||+|. ..+++.||||++.... .....+.+.+|++++++++||||+++++++.....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 45678999999999999999995 4578899999986443 22234567789999999999999999997753321
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++++|++ +++|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 3358899988 7899888764 3589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
|||+++..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ ....+....
T Consensus 161 Dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~ 232 (343)
T cd07878 161 DFGLARQADDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVV 232 (343)
T ss_pred CCccceecCCC-------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHh
Confidence 99999764321 123468999999999876 568999999999999999999999997543211 111111110
Q ss_pred Hhc--------cchhhhhhhcccCCCCCCch------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1177 MEM--------SGSAREELLDDQMKPLLPGE------ECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1177 ~~~--------~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... ........... + +..+.. ....+.+.+++.+|++.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 233 GTPSPEVLKKISSEHARKYIQS-L-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCCCHHHHHhcchhhHHHHhhc-c-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000000 0 001100 0123457899999999999999999999864
No 240
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.6e-33 Score=314.49 Aligned_cols=263 Identities=27% Similarity=0.383 Sum_probs=204.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||.|++|.||+|.. .+++.||+|.+...........+.+|++++++++||||++++++|........++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 577788999999999999965 4689999999876555455678899999999999999999999987766667899999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++.... .....++...+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~---~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 82 YCEGGSLDSIYKKVK---KRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred ecCCCCHHHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999876421 1235578899999999999999999999 9999999999999999999999999998654
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.... .....++..|+|||.+.+..++.++||||+||++|||++|+.||+..........+......... .
T Consensus 156 ~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~- 225 (287)
T cd06621 156 VNSL------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP---N- 225 (287)
T ss_pred cccc------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC---c-
Confidence 3211 11245788999999999889999999999999999999999999765321111111111111000 0
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.............+..+.+++.+||+.+|++|||+.|+++
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 226 ----PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ----hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0000111111224567899999999999999999999987
No 241
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.1e-33 Score=311.72 Aligned_cols=254 Identities=24% Similarity=0.395 Sum_probs=199.8
Q ss_pred CCCcCceecccCCceEEEEEecCCcEEEEEEeccCCc-----hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDD-----HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
+|...+.||+|+||+||+|...+++.||||.+..... ....+.+.+|++++++++|+||+++++++.+. ...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--NTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC--CeEE
Confidence 4677889999999999999888899999999864431 22345688999999999999999999988654 5679
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|+||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.+||+|||.
T Consensus 79 lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 148 (265)
T cd06631 79 IFMEFVPGGSISSILNRF-------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGC 148 (265)
T ss_pred EEEecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchh
Confidence 999999999999999763 4578999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccC--CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1102 AKALVEDYN--SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1102 a~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+........ ..........|+..|+|||++.+..++.++||||+||++||+++|+.||......+... ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~--~~~~---- 222 (265)
T cd06631 149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF--YIGA---- 222 (265)
T ss_pred hHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH--Hhhh----
Confidence 876432111 11111223468899999999998889999999999999999999999997542211100 0000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.....+.. +...+.++.+++.+||+.+|++||++.++++
T Consensus 223 ---------~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 223 ---------HRGLMPRL--PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---------ccCCCCCC--CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000111 1224566889999999999999999999875
No 242
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.3e-33 Score=313.65 Aligned_cols=253 Identities=34% Similarity=0.498 Sum_probs=196.9
Q ss_pred CCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhh-HHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLN-KSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|+..+.||+|+||+||+|+.. +++.||+|++......... ....+|+.++++++||||+++++++.. ....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--ccccccccc
Confidence 456779999999999999654 5678999999876544332 244569999999999999999998866 455689999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++.. ...+++.++..++.|+++|++|||+. +|+|+||||+||++++++.++|+|||.+...
T Consensus 79 ~~~~~~L~~~l~~-------~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 79 YCPGGSLQDYLQK-------NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKL 148 (260)
T ss_dssp EETTEBHHHHHHH-------HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred ccccccccccccc-------cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 9999999999983 35689999999999999999999999 9999999999999999999999999998754
Q ss_pred ccccCCCCcccceeecccceecccccc-cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAY-SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
. ..........++..|+|||++. +..++.++||||+|+++|+|++|..||...... +.......... ....
T Consensus 149 ~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~--~~~~ 220 (260)
T PF00069_consen 149 S----ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILK--RPLP 220 (260)
T ss_dssp T----STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHH--THHH
T ss_pred c----ccccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhccc--cccc
Confidence 1 1122223357899999999998 888999999999999999999999999865111 11111111110 0000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... .........+.+++.+|++.||++||++.++++
T Consensus 221 ~~~---------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 221 SSS---------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHT---------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccc---------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 000011267999999999999999999999875
No 243
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.9e-33 Score=310.10 Aligned_cols=252 Identities=28% Similarity=0.441 Sum_probs=199.5
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+|+..+.||+|+||.||+|.+.+++.+|+|++..... ..+.+.+|++++++++||+++++++++... ...++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTER--SPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccC--CceEEEEE
Confidence 45777889999999999999877788999999864332 346788999999999999999999987544 45689999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.+++... ...++++.+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 80 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 80 FMEHGCLSDYLRAQ------RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred cCCCCcHHHHHHhC------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeec
Confidence 99999999998754 24578999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......++.+|+|||.+.+..++.++||||+|+++||+++ |+.||......+ ..+....
T Consensus 151 ~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~------ 216 (256)
T cd05112 151 LDDQY---TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-----VVETINA------ 216 (256)
T ss_pred ccCcc---cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----HHHHHhC------
Confidence 32211 11122345678999999998889999999999999999998 999987542211 1111100
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
...... +...+..+.+++.+||+.+|++|||++++++.|.
T Consensus 217 ------~~~~~~--~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 217 ------GFRLYK--PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------CCCCCC--CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 000000 1113467899999999999999999999998863
No 244
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6.7e-33 Score=312.59 Aligned_cols=261 Identities=23% Similarity=0.379 Sum_probs=202.4
Q ss_pred cCCCcCceecccCCceEEEEEec------CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA------NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
.+|+....||+|+||.||+|+.+ +.+.||+|.+.........+.+.+|++++++++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA--EP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC--Cc
Confidence 46788889999999999999754 34679999986555444567899999999999999999999987543 44
Q ss_pred eeEEEeecCCCChHHhhhcCCCCc--ccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNI--KMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
.++||||+++|+|.+++....... .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 699999999999999997643111 1122689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
|||+++...... ........++..|+|||.+.+..++.++||||+|+++||+++ |..||....... .+...
T Consensus 160 ~~~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-----~~~~~ 231 (275)
T cd05046 160 LLSLSKDVYNSE---YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-----VLNRL 231 (275)
T ss_pred ccccccccCccc---ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-----HHHHH
Confidence 999986543221 111222356788999999988889999999999999999999 888986432211 11111
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.. ... ..+.....+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 232 ~~-----------~~~--~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QA-----------GKL--ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred Hc-----------CCc--CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 000 01112234567899999999999999999999999875
No 245
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.6e-33 Score=316.73 Aligned_cols=265 Identities=24% Similarity=0.345 Sum_probs=202.3
Q ss_pred HHHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 938 WEDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 938 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
+++.....++|++.+.||+|+||.||+|.. .+++.||+|++..... ..+.+..|+.+++++ +||||+++++++...
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--IDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--hHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 344455678899999999999999999954 4688999998754322 235678899999999 699999999987542
Q ss_pred ---CCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1016 ---GAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1016 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
.....++||||+++|+|.++++... .....+++..+..++.|+++|+.|||+. +|+||||||+||++++++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFL---KRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhh---ccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 2345799999999999999886421 1135688999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccccCCCCcccceeecccceeccccccc-----CCCCCccceeehhHHHHHHhhCCCCCCCccccch
Q 000859 1093 EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEM 1167 (1251)
Q Consensus 1093 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~ 1167 (1251)
.+|++|||.++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||........
T Consensus 162 ~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~ 237 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237 (286)
T ss_pred CEEEccCCceeecccCC----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence 99999999987653211 11223468999999998753 4578899999999999999999999975422110
Q ss_pred hHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1168 DMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.. .. .....+....+...+.++.+++.+||+.||++|||++|+++..
T Consensus 238 ----~~----~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 238 ----LF----KI---------PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ----Hh----hc---------cccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 00 0000011111222345688999999999999999999998753
No 246
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.8e-33 Score=307.48 Aligned_cols=249 Identities=27% Similarity=0.432 Sum_probs=197.8
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCC
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGS 1031 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gs 1031 (1251)
++||+|+||.||+|...+++.||+|++.........+.+.+|++++++++||||+++++++... ...++||||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEEcCCCCc
Confidence 3699999999999977669999999987655544567899999999999999999999987654 45699999999999
Q ss_pred hHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCC
Q 000859 1032 VWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNS 1111 (1251)
Q Consensus 1032 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 1111 (1251)
|.+++... ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.+.........
T Consensus 79 l~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 149 (251)
T cd05041 79 LLTFLRKK------KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT 149 (251)
T ss_pred HHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcce
Confidence 99999753 24578999999999999999999999 9999999999999999999999999998754321111
Q ss_pred CCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1112 NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1112 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......++..|+|||.+.+..++.++|+||+||++|||+| |..||........ .... ..
T Consensus 150 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~--~~~~---------------~~ 210 (251)
T cd05041 150 --VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT--RERI---------------ES 210 (251)
T ss_pred --eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH--HHHH---------------hc
Confidence 11111234667999999988899999999999999999999 8889865432111 1100 00
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.. ..+.+...+.++.+++.+|++.+|++|||++|+++.|.
T Consensus 211 ~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 211 GY--RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CC--CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 00 11112234567999999999999999999999999875
No 247
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.5e-33 Score=310.36 Aligned_cols=253 Identities=26% Similarity=0.384 Sum_probs=201.3
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++|+..+.||+|+||.||+|.. .+++.+|+|++...... ..+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLR--RDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEe--CCEEEEEE
Confidence 5688889999999999999965 46789999999755433 55788999999999999999999998755 34579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++... ...+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.+||+|||.+..
T Consensus 80 e~~~~~~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 150 (262)
T cd06613 80 EYCGGGSLQDIYQVT------RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQ 150 (262)
T ss_pred eCCCCCcHHHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchh
Confidence 999999999998763 25688999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccC---CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL---KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
..... .......++..|+|||.+.+. .++.++|+||+||++|||++|+.||......+.... ..
T Consensus 151 ~~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-----~~---- 217 (262)
T cd06613 151 LTATI----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-----IS---- 217 (262)
T ss_pred hhhhh----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HH----
Confidence 53221 112234678899999998776 789999999999999999999999975432211000 00
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
. ..............+.++.+++.+||+.+|.+|||+++|+.
T Consensus 218 --~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 218 --K----SNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --h----ccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000111123335667899999999999999999999875
No 248
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.2e-33 Score=315.69 Aligned_cols=262 Identities=28% Similarity=0.422 Sum_probs=203.5
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++|+..+.||+|+||+||+|.. .+++.||+|++.........+.+.+|+++++.++||||+++++++... ...++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CEEEEEE
Confidence 3567778999999999999965 468899999987665555667899999999999999999999988654 5679999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.+ .+.+++..+..++.+++.|+.|||+.+ +++||||||+||+++.++.++|+|||++..
T Consensus 83 e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~ 153 (284)
T cd06620 83 EFMDCGSLDRIYKK-------GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGE 153 (284)
T ss_pred ecCCCCCHHHHHHh-------ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccc
Confidence 99999999999876 346899999999999999999999731 899999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... ......|+..|+|||++.+..++.++|||||||++||+++|+.||......+........ .. ...
T Consensus 154 ~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~-~~----~~~ 222 (284)
T cd06620 154 LINS------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMG-IL----DLL 222 (284)
T ss_pred hhhh------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhH-HH----HHH
Confidence 4221 112346899999999998889999999999999999999999999865432110000000 00 000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
....... .+.++ ....+.++.+++.+|++.||++|||++|++++.
T Consensus 223 ~~~~~~~-~~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 223 QQIVQEP-PPRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHhhcc-CCCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 1111110 11111 122456789999999999999999999999864
No 249
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.1e-33 Score=314.78 Aligned_cols=260 Identities=23% Similarity=0.351 Sum_probs=200.2
Q ss_pred HHHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 938 WEDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 938 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
..+.......|+..+.||+|+||.||+|.. .+++.||+|++.... .....+..|+.+++++ +||||+++++++...
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 334444566788889999999999999965 568899999985432 2345688899999999 799999999987643
Q ss_pred ----CCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC
Q 000859 1016 ----GAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN 1091 (1251)
Q Consensus 1016 ----~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 1091 (1251)
.....+++|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+|||+||+||+++++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-----GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 2345789999999999999997643 34578888999999999999999999 99999999999999999
Q ss_pred CCeEEcccccccccccccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccc
Q 000859 1092 MEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVE 1166 (1251)
Q Consensus 1092 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~ 1166 (1251)
+.++|+|||.+....... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||......+
T Consensus 158 ~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~ 233 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR 233 (282)
T ss_pred CCEEEeeCcchhhhhccc----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh
Confidence 999999999987543211 1122356889999999875 3467889999999999999999999996542211
Q ss_pred hhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1167 MDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. .. ......+.. .....+.++.+++.+||+.||.+||++.|+++
T Consensus 234 ~~----~~-------------~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 234 AL----FL-------------IPRNPPPKL-KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hh----hh-------------HhhCCCCCC-cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 10 00 000000111 11234567899999999999999999999875
No 250
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.2e-33 Score=322.15 Aligned_cols=270 Identities=20% Similarity=0.272 Sum_probs=193.7
Q ss_pred Cceeccc--CCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 951 EFIIGSG--GSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 951 ~~~lG~G--~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
..+||+| +||+||++. ..+|+.||||++.... .....+.+.+|+++++.++||||+++++++..+ ...++||||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEEEEEec
Confidence 4579999 788999995 4678999999997543 233445677899999999999999999988654 457999999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++|+|.+++.... ...+++..+++++.|++.||+|||++ +|+||||||+||+++.++.++++|||.+....
T Consensus 81 ~~~~~l~~~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 81 MAYGSAKDLICTHF-----MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 152 (327)
T ss_pred cCCCcHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccc
Confidence 99999999997542 34589999999999999999999999 99999999999999999999999998764432
Q ss_pred cccCC---CCcccceeecccceeccccccc--CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1107 EDYNS---NTESNTWFAGSYGYIAPEYAYS--LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1107 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
..... .........++..|+|||++.+ ..++.++|||||||++|||++|+.||......................
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 232 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccc
Confidence 11110 0111122356788999999876 458999999999999999999999997543221111100000000000
Q ss_pred ---hhhhhh--------hc----c-c----CC------CCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 ---SAREEL--------LD----D-Q----MK------PLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ---~~~~~~--------~~----~-~----~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...++. .+ . . .. ...+.....++.+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000000 00 0 0 00 0001122345678999999999999999999999863
No 251
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=7.5e-33 Score=308.83 Aligned_cols=252 Identities=22% Similarity=0.354 Sum_probs=199.9
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|++|.||++.. .+++.||+|++.... .....+.+.+|++++++++|+|++++++.+... ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CCEEEEEe
Confidence 477888999999999999954 467899999986543 233456788999999999999999999876432 33468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 80 e~~~~~~l~~~l~~~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~ 151 (257)
T cd08223 80 GFCEGGDLYHKLKEQK-----GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARV 151 (257)
T ss_pred cccCCCcHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEE
Confidence 9999999999997632 34689999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......+++.|+|||+..+..++.++||||+|+++||+++|+.||...... .+.....
T Consensus 152 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~------- 215 (257)
T cd08223 152 LENQC----DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-----SLVYRII------- 215 (257)
T ss_pred ecccC----CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHH-------
Confidence 53221 1222346789999999999989999999999999999999999998754211 1111110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.... + +.+...+.++.+++.+|++.||++|||+.++++.
T Consensus 216 ----~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 216 ----EGKL-P--PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ----hcCC-C--CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 1 1122355678999999999999999999999864
No 252
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.2e-33 Score=313.79 Aligned_cols=254 Identities=24% Similarity=0.385 Sum_probs=198.7
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|+||.||+|... +++.||+|.+.........+.+.+|++++++++||||+++++.+.. +...++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e 79 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMCME 79 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEEEe
Confidence 5778889999999999999664 7899999998755444455788999999999999999999998765 456799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.++++... ....+++..+.+++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||.+..+
T Consensus 80 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 80 YMDAGSLDKLYAGGV----ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred ecCCCCHHHHHHhcc----ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999999999987531 1346899999999999999999999631 8999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccC------CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSL------KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
.... .....++..|+|||.+.+. .++.++||||+||++|||++|+.||........ ....
T Consensus 154 ~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-----~~~~--- 219 (286)
T cd06622 154 VASL------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-----FAQL--- 219 (286)
T ss_pred cCCc------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-----HHHH---
Confidence 3211 1223578899999988544 357899999999999999999999965422111 0000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...... ..+.. +...+.++.+++.+||+.+|++||+++++++.
T Consensus 220 -----~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 220 -----SAIVDG-DPPTL--PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -----HHHhhc-CCCCC--CcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 011110 01111 22256778999999999999999999999874
No 253
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.4e-33 Score=307.86 Aligned_cols=251 Identities=24% Similarity=0.389 Sum_probs=201.8
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||.++ ..+++.||+|++.... .....+.+.+|++++++++|+||+++++++.+. ...+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD--NTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC--CeEEEEE
Confidence 47888999999999999984 4568999999986543 344556788999999999999999999988653 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++|+|.+++.... ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.+||+|||.+..
T Consensus 79 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~ 150 (256)
T cd08221 79 EYANGGTLYDKIVRQK-----GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKI 150 (256)
T ss_pred EecCCCcHHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEE
Confidence 9999999999997642 34689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
...... ......|+..|+|||...+..++.++||||+|+++|||++|+.||......+ ....
T Consensus 151 ~~~~~~----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-----~~~~--------- 212 (256)
T cd08221 151 LGSEYS----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-----LVVK--------- 212 (256)
T ss_pred cccccc----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-----HHHH---------
Confidence 533221 1223468899999999988889999999999999999999999997542211 1110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....... +.....+.++.+++.+||+.+|++||+++++++.
T Consensus 213 --~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 213 --IVQGNYT---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --HHcCCCC---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0011111 1112345678899999999999999999999875
No 254
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=347.67 Aligned_cols=256 Identities=29% Similarity=0.387 Sum_probs=202.9
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
+-++....+||.|.||.||.| ...+|+-.|+|-++.... ....+.+.+|+.++..+.|||+|++||+-... ...+|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR--ekv~I 1311 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR--EKVYI 1311 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH--HHHHH
Confidence 345666778999999999999 567799999999876543 33456678999999999999999999966543 44689
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
.||||++|+|.+.++.. +..++.....+..|++.|++|||++ |||||||||+||+++.+|.+|.+|||.|
T Consensus 1312 FMEyC~~GsLa~ll~~g-------ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHG-------RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred HHHHhccCcHHHHHHhc-------chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccce
Confidence 99999999999998763 3455666667888999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCC---CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK---ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
..+........+.-....||+.|||||++.+.. ...++||||+|||+.||+||+.||...+. +|..++.-
T Consensus 1382 ~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn------e~aIMy~V- 1454 (1509)
T KOG4645|consen 1382 VKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN------EWAIMYHV- 1454 (1509)
T ss_pred eEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc------hhHHHhHH-
Confidence 988766433334445678999999999997654 56789999999999999999999975533 12222211
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+....+.++..+.+-.+++..|+..||++|.++.|+++.
T Consensus 1455 -----------~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1455 -----------AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----------hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1112223334467778899999999999999888866543
No 255
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.1e-33 Score=313.82 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=195.3
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|...+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.+++.++||||+++++++.. ....++|+|
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~~~lv~e 86 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDKLWICME 86 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEEEe
Confidence 466677899999999999954 5689999999865433 234567889999999999999999998755 345799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.++++. .+.+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.+...
T Consensus 87 ~~~~~~L~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 87 FCGGGSLQDIYHV-------TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred ccCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence 9999999999875 34689999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
... ........|+..|+|||++. ...++.++|+||+||++|||++|+.||....+...... ...
T Consensus 157 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~---~~~------ 223 (267)
T cd06645 157 TAT----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL---MTK------ 223 (267)
T ss_pred cCc----ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHh---hhc------
Confidence 322 11223357899999999874 45588999999999999999999999865432111000 000
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.....+........+..+.+++.+|++.+|++||+++++++
T Consensus 224 ------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 224 ------SNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ------cCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00000111111123456889999999999999999999875
No 256
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-32 Score=312.19 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=194.8
Q ss_pred CCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
|+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+++++.++||||+++++++... ...++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--CEEEEEEEe
Confidence 455678999999999999654 57888999986443 33456788999999999999999999988654 457999999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++|+|..++.+. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++....
T Consensus 84 ~~~~~l~~~~~~~------~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 84 CAGGAVDAVMLEL------ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 154 (282)
T ss_pred cCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccc
Confidence 9999999987653 34689999999999999999999999 99999999999999999999999999987543
Q ss_pred cccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
... .......++..|+|||++. +..++.++||||+||++|||++|+.||......+. ......
T Consensus 155 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~~--- 222 (282)
T cd06643 155 RTI----QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAK--- 222 (282)
T ss_pred ccc----cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-----HHHHhh---
Confidence 221 1122346889999999874 34578899999999999999999999875422111 000000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...+....+...+.++.+++.+||+.||.+||+++++++.
T Consensus 223 ---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 223 ---------SEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ---------cCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001111122245678999999999999999999998754
No 257
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-32 Score=308.66 Aligned_cols=255 Identities=24% Similarity=0.388 Sum_probs=187.4
Q ss_pred eecccCCceEEEEEecCC---cEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 953 IIGSGGSGTVYKAELANG---ATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
.||+|+||+||+|+..++ ..+++|.+.........+.+.+|+.+++.++||||++++++|... ...++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--IPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC--CccEEEEecCCC
Confidence 599999999999965433 356677766555445567899999999999999999999988654 446999999999
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
|+|.+++++... .....++..+..++.||+.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 80 GDLKSYLSQEQW---HRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED 153 (268)
T ss_pred CcHHHHHHhhhc---ccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcch
Confidence 999999976421 123467778889999999999999999 99999999999999999999999999985432111
Q ss_pred CCCCcccceeecccceeccccccc-------CCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYS-------LKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
. ........++..|+|||++.. ..++.++|||||||++|||++ |..||......+ .......
T Consensus 154 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~~~~~~~--- 223 (268)
T cd05086 154 Y--IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-----VLNHVIK--- 223 (268)
T ss_pred h--hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHh---
Confidence 1 111123467889999998743 245789999999999999997 677886542211 1111000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
....... .+..+ ....+.+.+++..|| .+|++||++++|++.|.
T Consensus 224 ~~~~~~~----~~~~~--~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 224 DQQVKLF----KPQLE--LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred hcccccC----CCccC--CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 0000111 11111 124456888999999 67999999999998874
No 258
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.4e-32 Score=308.10 Aligned_cols=255 Identities=29% Similarity=0.423 Sum_probs=201.3
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|...+.||+|+||.||+|.. .+++.||+|.+...... ...+.+..|++++++++|+||+++++++.. ....++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH--REKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--CCEEEEEE
Confidence 477788999999999999965 46899999998755432 356788999999999999999999997644 45579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++... ..+++..+..++.|+++|++|||+. +|+|+||+|+||++++++.+||+|||.+..
T Consensus 79 e~~~~~~L~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~ 148 (264)
T cd06626 79 EYCSGGTLEELLEHG-------RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVK 148 (264)
T ss_pred ecCCCCcHHHHHhhc-------CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccc
Confidence 999999999999763 4578899999999999999999999 999999999999999999999999999977
Q ss_pred cccccCCCCcccceeecccceecccccccCC---CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLK---ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
................++..|+|||++.+.. ++.++||||||+++||+++|+.||........ .....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~------~~~~~--- 219 (264)
T cd06626 149 LKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ------IMFHV--- 219 (264)
T ss_pred cCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH------HHHHH---
Confidence 6443322221112346788999999988766 88999999999999999999999975432110 00000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.....+..+.....+..+.+++.+||+.+|++||+++|++.
T Consensus 220 -------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 220 -------GAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -------hcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00111222223234667889999999999999999999874
No 259
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.6e-33 Score=311.90 Aligned_cols=249 Identities=28% Similarity=0.402 Sum_probs=201.3
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||.|+||.||+|.. .+++.||+|++...........+.+|+++++.++|+||+++++++.+. ...++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG--SKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--CeEEEEEE
Confidence 577788999999999999965 468999999997655444557788999999999999999999988654 56799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.++..
T Consensus 80 ~~~~~~L~~~~~~~--------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 80 YCGGGSCLDLLKPG--------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred eeCCCcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceee
Confidence 99999999998752 688999999999999999999999 9999999999999999999999999999776
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.... .......++..|+|||.+.+..++.++|||||||++|||+||+.||....+.+. ....
T Consensus 149 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~--------- 210 (274)
T cd06609 149 TSTM----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLI--------- 210 (274)
T ss_pred cccc----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHh---------
Confidence 4321 112234678899999999988899999999999999999999999975432111 0000
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.....+..+.. ..+.++.+++.+||..||++|||++++++.
T Consensus 211 ---~~~~~~~~~~~-~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 211 ---PKNNPPSLEGN-KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ---hhcCCCCCccc-ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 00011111111 145578899999999999999999999763
No 260
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.9e-33 Score=315.32 Aligned_cols=250 Identities=23% Similarity=0.373 Sum_probs=200.2
Q ss_pred cCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.+|+..+.||.|+||.||+|. ..+++.||+|.+..... ...+.+.+|+++++.++||||+++++++.. ....++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLV--GDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEec--CceEEEEE
Confidence 458888899999999999995 46789999999865433 235678899999999999999999998864 34579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 96 e~~~~~~L~~~~~~--------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~ 164 (296)
T cd06655 96 EYLAGGSLTDVVTE--------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQ 164 (296)
T ss_pred EecCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchh
Confidence 99999999999864 3478999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
...... ......|+..|+|||.+.+..++.++|||||||++||+++|+.||......... .. .
T Consensus 165 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~--~~---~-------- 227 (296)
T cd06655 165 ITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--YL---I-------- 227 (296)
T ss_pred cccccc----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HH---H--------
Confidence 533211 112246788999999999888999999999999999999999999765321110 00 0
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.....+....+...+..+.+++.+||..||++||+++++++.
T Consensus 228 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 228 ----ATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ----HhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000011122223345678899999999999999999999753
No 261
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.9e-33 Score=313.68 Aligned_cols=239 Identities=23% Similarity=0.373 Sum_probs=184.7
Q ss_pred eecccCCceEEEEEecC-------------------------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccc
Q 000859 953 IIGSGGSGTVYKAELAN-------------------------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVK 1007 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 1007 (1251)
.||+|+||.||+|.+.. ...||+|++.... ....+.+.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeee
Confidence 59999999999996421 1358999885433 234467888999999999999999
Q ss_pred eeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCee
Q 000859 1008 LMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNIL 1087 (1251)
Q Consensus 1008 l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 1087 (1251)
++|+|... ...++||||+++|+|..++.+. .+.+++..+.+++.|+++||+|||++ +|+||||||+||+
T Consensus 81 ~~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nil 149 (274)
T cd05076 81 VHGVCVRG--SENIMVEEFVEHGPLDVCLRKE------KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNIL 149 (274)
T ss_pred EEEEEEeC--CceEEEEecCCCCcHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEE
Confidence 99998654 3468999999999999998753 35688999999999999999999999 9999999999999
Q ss_pred ecCCC-------CeEEcccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHh-hCCCC
Q 000859 1088 LDSNM-------EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELV-SGKMP 1158 (1251)
Q Consensus 1088 l~~~~-------~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~-tg~~p 1158 (1251)
++..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.|
T Consensus 150 l~~~~~~~~~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p 221 (274)
T cd05076 150 LARLGLAEGTSPFIKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVP 221 (274)
T ss_pred EeccCcccCccceeeecCCccccccccc--------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 97644 3899999987543211 11356788999998865 56899999999999999995 69999
Q ss_pred CCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1159 TDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
|......+. ..+. ... ...+ ......+.+++.+||+.+|++|||+++|++.|.
T Consensus 222 ~~~~~~~~~--~~~~---------------~~~--~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 222 LKERTPSEK--ERFY---------------EKK--HRLP--EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ccccChHHH--HHHH---------------Hhc--cCCC--CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 875533221 1110 000 0111 112346889999999999999999999998873
No 262
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-32 Score=308.66 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=204.2
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++|+..+.||.|+||+||+|.. .++..||+|++.........+.+.+|+++++.++|+||+++++.+.. ....++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEEE
Confidence 3688889999999999999964 46789999998755544466789999999999999999999997754 45579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|++++++|.++++... ....+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++++|||++..
T Consensus 79 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~ 151 (267)
T cd06610 79 PYLSGGSLLDIMKSSY----PRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSAS 151 (267)
T ss_pred eccCCCcHHHHHHHhc----ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHH
Confidence 9999999999997632 124689999999999999999999999 999999999999999999999999999877
Q ss_pred cccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
+...............|+..|+|||++... .++.++|+|||||++|||++|+.||......+. ..... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~---~~----- 222 (267)
T cd06610 152 LADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTL---QN----- 222 (267)
T ss_pred hccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHh---cC-----
Confidence 654332221222335689999999998776 789999999999999999999999975533211 11100 00
Q ss_pred hhhhhcccCCCCCCc---hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 REELLDDQMKPLLPG---EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..+..+. ....+..+.+++.+|++.||++||+++++++
T Consensus 223 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 223 --------DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --------CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0011111 1234567889999999999999999999986
No 263
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.6e-33 Score=324.35 Aligned_cols=241 Identities=25% Similarity=0.311 Sum_probs=183.2
Q ss_pred ecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhc---cCCCccceeceeeecCCCceeEEEeec
Q 000859 954 IGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRI---RHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 954 lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
||+|+||+||+|+. .+++.||||++..... ......+..|..++... +||+|+++++++.. +...++||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~--~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT--DSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec--CCeEEEEEcCC
Confidence 69999999999954 4689999999864321 12233455677777665 69999999987754 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++|+|.+++.. .+.+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~g~L~~~l~~-------~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~ 148 (330)
T cd05586 79 SGGELFWHLQK-------EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLT 148 (330)
T ss_pred CCChHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCC
Confidence 99999999875 35689999999999999999999999 999999999999999999999999999865322
Q ss_pred ccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
. ........||..|+|||++.+. .++.++||||+||++|||++|+.||......+. ....
T Consensus 149 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~-----~~~i---------- 209 (330)
T cd05586 149 D----NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM-----YRNI---------- 209 (330)
T ss_pred C----CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH-----HHHH----------
Confidence 1 1112235789999999998754 489999999999999999999999975422111 0000
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS----SRQVCD 1229 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 1229 (1251)
.... ..++ ....+.++.+++.+||+.||.+||+ ++++++
T Consensus 210 -~~~~--~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 210 -AFGK--VRFP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -HcCC--CCCC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0000 0111 1123456789999999999999984 555554
No 264
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-32 Score=308.97 Aligned_cols=251 Identities=24% Similarity=0.409 Sum_probs=197.6
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch--------hhhHHHHHHHHHHHhccCCCccceeceeeecCCC
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH--------LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 1018 (1251)
|.....||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|++++++++||||+++++++... .
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 79 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA--D 79 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--C
Confidence 66778999999999999954 46889999988644321 2235788999999999999999999987654 4
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++|+||+++++|.+++... +.+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~d 149 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNY-------GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISD 149 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhc-------cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecc
Confidence 568999999999999999763 4678899999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCC--CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSN--TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
||.++......... ........|+..|+|||.+.+..++.++|+||+||++|||++|+.||........ . .
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~-~-- 222 (267)
T cd06628 150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA----I-F-- 222 (267)
T ss_pred cCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH----H-H--
Confidence 99998764321111 1111234578999999999988899999999999999999999999975422110 0 0
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... ....+.. +...+..+.+++.+||+.||.+||++.|+++
T Consensus 223 ---------~~~-~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 223 ---------KIG-ENASPEI--PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---------HHh-ccCCCcC--CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 0111111 1224567889999999999999999999875
No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.3e-33 Score=313.70 Aligned_cols=247 Identities=26% Similarity=0.407 Sum_probs=198.4
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
|+..+.||+|+||.||+|.. .+++.||+|.+.........+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~ 83 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK--GTKLWIIMEY 83 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc--CCceEEEEEc
Confidence 45556799999999999954 56789999998755555556788999999999999999999998854 3457999999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++++|.+++.. ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||++..+.
T Consensus 84 ~~~~~L~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 84 LGGGSALDLLKP--------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred cCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccccccc
Confidence 999999999864 3578999999999999999999999 99999999999999999999999999987653
Q ss_pred cccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
... .......|+..|+|||++.+..++.++|||||||++|||++|+.||....+... ..
T Consensus 153 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~------------ 211 (277)
T cd06642 153 DTQ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LF------------ 211 (277)
T ss_pred Ccc----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----Hh------------
Confidence 221 112224678899999999988899999999999999999999999865432111 00
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.......+.. ....+.++.+++.+||+.+|++||++.++++.
T Consensus 212 ~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 212 LIPKNSPPTL--EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred hhhcCCCCCC--CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0011111111 12345668899999999999999999999974
No 266
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.1e-33 Score=309.66 Aligned_cols=255 Identities=26% Similarity=0.372 Sum_probs=203.7
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||.|+||.||+|. ..+++.||+|++.... .....+.+..|++++++++||||+++++++........+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47778899999999999995 4578899999986443 344456788999999999999999999988766666679999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLH-----HDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
||+++++|.+++.... .....+++..++.++.|++.|++||| +. +++|+||||+||+++.++.+|++||
T Consensus 81 e~~~~~~L~~~l~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 81 EYCEGGDLAQLIQKCK---KERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred hhccCCCHHHHHHHHh---hcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecc
Confidence 9999999999997532 12456899999999999999999999 66 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
|++........ ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...+..
T Consensus 155 g~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~--- 222 (265)
T cd08217 155 GLAKILGHDSS----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASKI--- 222 (265)
T ss_pred cccccccCCcc----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHHH---
Confidence 99976533211 112346889999999999888999999999999999999999999765311 111110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.....+. .+...+..+.+++.+|++.+|++||++++|++.
T Consensus 223 ---------~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 223 ---------KEGKFRR--IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---------hcCCCCC--CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0011111 122345678999999999999999999999863
No 267
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.7e-33 Score=320.30 Aligned_cols=255 Identities=21% Similarity=0.268 Sum_probs=193.8
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|+..++||+|+||+||++..+ +++.||+|++.... .....+.+..|+.++..++|++|+++++++.. +...++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD--ENNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCEEEE
Confidence 36888899999999999999654 57889999985322 22234557889999999999999999987754 455799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~ey~~~g~L~~~l~~~------~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a 149 (332)
T cd05623 79 VMDYYVGGDLLTLLSKF------EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 149 (332)
T ss_pred EEeccCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchh
Confidence 99999999999999763 24688999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
..+.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||......+. ....
T Consensus 150 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~-----~~~i- 220 (332)
T cd05623 150 LKLMEDG---TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-----YGKI- 220 (332)
T ss_pred eecccCC---cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH-----HHHH-
Confidence 7543221 11122357899999999886 34578999999999999999999999975422111 1110
Q ss_pred hccchhhhhhhcccCCCCCC-chHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 000859 1178 EMSGSAREELLDDQMKPLLP-GEECAAYQVLEIALQCTKTSPQE--RPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1230 (1251)
.........+ .....+.++.+++.+|+..++++ |++++|+++.
T Consensus 221 ----------~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 221 ----------MNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ----------hCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0000000111 11224567888999988665544 6899998766
No 268
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8e-33 Score=307.93 Aligned_cols=247 Identities=29% Similarity=0.438 Sum_probs=197.6
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+|.+.+.||+|+||.||+|.. +++.||+|++.... ..+.+.+|+.++++++|||++++++++... ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN---GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---CcEEEEE
Confidence 3578888999999999999975 57899999986433 236788999999999999999999987543 3589999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 79 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 79 LMSKGNLVNFLRTRG-----RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred CCCCCCHHHHHHhcC-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceec
Confidence 999999999997642 34678999999999999999999998 9999999999999999999999999998654
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... .....+..|+|||.+.+..++.++|+||+||++|||++ |+.||......+ .....
T Consensus 151 ~~~~-------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~-------- 210 (254)
T cd05083 151 SMGV-------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----VKECV-------- 210 (254)
T ss_pred cccC-------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHH--------
Confidence 2211 11233568999999988899999999999999999998 999987553211 11110
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
....... .....+..+.+++.+||+.+|++||+++++++.|++
T Consensus 211 ----~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 211 ----EKGYRME--PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----hCCCCCC--CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0011111 122345678899999999999999999999998763
No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.7e-33 Score=309.88 Aligned_cols=254 Identities=30% Similarity=0.455 Sum_probs=203.3
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|+||.||+|... +++.||+|++.........+.+.+|++++++++||||+++++++... ...++++|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN--GDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC--CEEEEEEE
Confidence 5677788999999999999654 68999999997665555667889999999999999999999988654 56799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|+++++|.+++.... ..+++..+.+++.|++.|++|+|+ . +++|+||||+||++++++.++|+|||.+..
T Consensus 80 ~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~ 150 (265)
T cd06605 80 YMDGGSLDKILKEVQ------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQ 150 (265)
T ss_pred ecCCCcHHHHHHHcc------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchh
Confidence 999999999997642 568899999999999999999999 8 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
....... ...++..|+|||.+.+..++.++||||+|+++|++++|+.||...........+..+...
T Consensus 151 ~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 217 (265)
T cd06605 151 LVNSLAK------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV------- 217 (265)
T ss_pred hHHHHhh------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-------
Confidence 5322111 156788999999999889999999999999999999999999755322121111111111
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. ..+..+.. ..+.++.++|.+||..||++|||+.+++..
T Consensus 218 ----~~-~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 218 ----NE-PPPRLPSG-KFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ----cC-CCCCCChh-hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 10 11111111 155678999999999999999999999753
No 270
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.2e-33 Score=313.17 Aligned_cols=252 Identities=22% Similarity=0.330 Sum_probs=199.8
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|++++++++||||+++++++.. +...++||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFY--ENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEe
Confidence 4577888999999999999965 468999999986443 3345678899999999999999999998865 44579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++... ...+++..+++++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||.+..
T Consensus 82 e~~~~~~L~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~ 152 (280)
T cd06611 82 EFCDGGALDSIMLEL------ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAK 152 (280)
T ss_pred eccCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchh
Confidence 999999999998763 34689999999999999999999999 999999999999999999999999998865
Q ss_pred cccccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
.... ........|+..|+|||.+. ...++.++||||+||++|||++|+.||........ .....
T Consensus 153 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~-- 221 (280)
T cd06611 153 NKST----LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-----LLKIL-- 221 (280)
T ss_pred hccc----ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-----HHHHh--
Confidence 4221 11223356899999999874 34577899999999999999999999976532111 00000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....+....+...+.++.+++.+||+.+|++||+++++++.
T Consensus 222 ----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 222 ----------KSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----------cCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00111222223345678899999999999999999999765
No 271
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.6e-33 Score=314.40 Aligned_cols=264 Identities=26% Similarity=0.327 Sum_probs=202.4
Q ss_pred HHHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 938 WEDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 938 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
.+++..+.++|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+++++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 344455678899999999999999999955 568899999985432 2346678899999999 899999999988754
Q ss_pred CC---CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1016 GA---GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1016 ~~---~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
.. ...++||||+++|+|.++++... .....+++..++.++.|++.|++|||+. +++||||||+||+++.++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLL---ICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 32 35799999999999999886421 1235689999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccccCCCCcccceeecccceecccccccC-----CCCCccceeehhHHHHHHhhCCCCCCCccccch
Q 000859 1093 EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-----KATEKCDVYSMGIVLMELVSGKMPTDATFGVEM 1167 (1251)
Q Consensus 1093 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~ 1167 (1251)
.+||+|||.++....... ......|+..|+|||.+... .++.++||||+||++|||++|+.||......+.
T Consensus 166 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~ 241 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT 241 (291)
T ss_pred CEEEeecccchhcccccc----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH
Confidence 999999999876532211 11224678899999987543 368899999999999999999999975422111
Q ss_pred hHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1168 DMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..... . ...+....++.....+.+++.+||+.+|++||+++|+++.
T Consensus 242 -----~~~~~-----------~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 242 -----LFKIP-----------R-NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred -----HHHHh-----------c-CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00000 0 0001111122234568899999999999999999999863
No 272
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.5e-32 Score=309.91 Aligned_cols=248 Identities=25% Similarity=0.380 Sum_probs=201.1
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.|+..+.||+|+||.||+|.. .+++.||+|++.........+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 82 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWIIME 82 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEEEe
Confidence 466677899999999999965 46889999998765545556788999999999999999999998865 345799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++|+|.+++.. ..+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||.+...
T Consensus 83 ~~~~~~L~~~i~~--------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~ 151 (277)
T cd06640 83 YLGGGSALDLLRA--------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred cCCCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceec
Confidence 9999999999865 3478889999999999999999999 9999999999999999999999999999765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.... .......++..|+|||++.+..++.++|+|||||++|||++|+.||....+... ..
T Consensus 152 ~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~----------- 211 (277)
T cd06640 152 TDTQ----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LF----------- 211 (277)
T ss_pred cCCc----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hh-----------
Confidence 3221 112234678899999999888899999999999999999999999975432111 00
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.......+ ......+..+.+++.+||+.+|++||++++++..
T Consensus 212 -~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 212 -LIPKNNPP--TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -hhhcCCCC--CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 00000111 1223456779999999999999999999999766
No 273
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.7e-33 Score=314.79 Aligned_cols=250 Identities=23% Similarity=0.363 Sum_probs=200.2
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|+..+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEe
Confidence 35688889999999999999964 57899999999754432 34678899999999999999999998854 4457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++++|.+++.+ ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+.
T Consensus 95 ~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 95 MEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred ecccCCCCHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccce
Confidence 999999999999865 3478899999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... .......+++.|+|||...+..++.++|+||+||++|++++|+.||..........
T Consensus 164 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-------------- 225 (297)
T cd06656 164 QITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------------- 225 (297)
T ss_pred EccCCc----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee--------------
Confidence 643221 11123467889999999998889999999999999999999999996542211000
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. .....+....+...+..+.+++.+||+.+|++||+++++++
T Consensus 226 --~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 226 --LI-ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred --ee-ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00001111122334566889999999999999999999987
No 274
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7.9e-33 Score=319.85 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=193.4
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|...+.||+|+||+||+++. .+++.||+|++.... .....+.+.+|..+++.++|++|+++++++.. ....++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~--~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD--ENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 3688889999999999999965 467899999986422 22234557889999999999999999988754 456799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++.+. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 79 v~Ey~~gg~L~~~l~~~------~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a 149 (331)
T cd05624 79 VMDYYVGGDLLTLLSKF------EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSC 149 (331)
T ss_pred EEeCCCCCcHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccce
Confidence 99999999999999763 24688999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceeccccccc-----CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYS-----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
+.+..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ....
T Consensus 150 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-----~~~i- 220 (331)
T cd05624 150 LKMNQDGT---VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-----YGKI- 220 (331)
T ss_pred eeccCCCc---eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH-----HHHH-
Confidence 76532211 11123468999999998875 4678899999999999999999999975422111 1100
Q ss_pred hccchhhhhhhcccCCCCCC-chHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 000859 1178 EMSGSAREELLDDQMKPLLP-GEECAAYQVLEIALQCTKTSPQE--RPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~ 1230 (1251)
.....+..++ .....+.++.+++.+|+..++.+ |++++++++.
T Consensus 221 ----------~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 221 ----------MNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----------HcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0000000011 11123456889999999866544 4678887654
No 275
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.2e-32 Score=307.12 Aligned_cols=256 Identities=25% Similarity=0.461 Sum_probs=200.0
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCc-----hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDD-----HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+|+..+.||+|+||.||+|. ..+++.||+|++..... ....+.+.+|++++++++|+||+++++++.+ ....
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE--DSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc--CCeE
Confidence 36777899999999999995 46789999999864331 1235678899999999999999999998854 3457
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-CeEEccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-EAHLGDF 1099 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Df 1099 (1251)
++|+||+++++|.+++.+. +.+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .+||+||
T Consensus 79 ~~v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~df 148 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKY-------GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADF 148 (268)
T ss_pred EEEEeccCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccc
Confidence 8999999999999999763 4688999999999999999999999 999999999999998776 5999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
|.+..................|+..|+|||.+.+..++.++||||+|+++||+++|+.||......... ....
T Consensus 149 g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--~~~~----- 221 (268)
T cd06630 149 GAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL--ALIF----- 221 (268)
T ss_pred ccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH--HHHH-----
Confidence 999776443222222223356889999999998888999999999999999999999999643221110 0000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
...... .....+...+.++.+++.+|++.+|++||++.++++
T Consensus 222 ------~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 222 ------KIASAT--TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ------HHhccC--CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000000 111122345567889999999999999999999975
No 276
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.4e-32 Score=308.74 Aligned_cols=255 Identities=23% Similarity=0.378 Sum_probs=195.8
Q ss_pred HhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
.+++.+.....||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++... ...+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--GFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--CEEE
Confidence 3455666667899999999999964 4678899999865443 3456889999999999999999999987553 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCC--CHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCeEEcc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSL--DWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEAHLGD 1098 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~D 1098 (1251)
+|+||+++++|.+++.... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW------GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred EEEecCCCCCHHHHHHHhc------ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 9999999999999997632 234 7888889999999999999999 9999999999999976 67999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCC--CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK--ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
||.+....... .......|+..|+|||++.... ++.++||||+||++||+++|+.||.......... +....
T Consensus 153 fg~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~~~~~ 226 (268)
T cd06624 153 FGTSKRLAGIN----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--FKVGM 226 (268)
T ss_pred chhheecccCC----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--hhhhh
Confidence 99987543211 1112245789999999986543 7889999999999999999999986542211100 00000
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
. ...+. .+.....++.+++.+||+.+|++|||++|+++.
T Consensus 227 ------------~-~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 227 ------------F-KIHPE--IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ------------h-ccCCC--CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0 00011 122345678899999999999999999998763
No 277
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.9e-32 Score=311.64 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=197.2
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
..|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..+ ...++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWD--GKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC--CeEEEEE
Confidence 45788889999999999999654 58899999986543 34567788999999999999999999988654 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|..++.+. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 89 e~~~~~~l~~~~~~~------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 89 EFCPGGAVDAIMLEL------DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred ecCCCCcHHHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCcccee
Confidence 999999999887653 34689999999999999999999999 999999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
.... ........++..|+|||++. ...++.++|||||||++|||++|+.||....... .......
T Consensus 160 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~- 229 (292)
T cd06644 160 NVKT----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAK- 229 (292)
T ss_pred cccc----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-----HHHHHhc-
Confidence 3221 11122346788999999874 3457889999999999999999999986542211 0000000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
...+....+...+.++.+++.+||+.||++||+++++++
T Consensus 230 -----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 230 -----------SEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -----------CCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 001111122234456889999999999999999999976
No 278
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-33 Score=308.59 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=194.9
Q ss_pred hcCCCcCceecccCCceEEEEEecCCcEEEEEEeccC-CchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCK-DDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
...|++.++||+||.+.||++...+.+.||+|++... .+......|..|++.|.++ .|.+||++|+|-.. ++..|+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~--d~~lYm 437 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT--DGYLYM 437 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc--CceEEE
Confidence 3458888899999999999998887888888887544 4666678899999999999 59999999997644 667899
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||-+ -+|..+|+... ...+.-.++.+..|++.|+.+.|++ ||||.|+||.|+++- .|.+||+|||.|
T Consensus 438 vmE~Gd-~DL~kiL~k~~------~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA 506 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKK------SIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIA 506 (677)
T ss_pred Eeeccc-ccHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechh
Confidence 999985 49999998753 2233227788999999999999999 999999999999985 579999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCC-----------CCCccceeehhHHHHHHhhCCCCCCCccccchhHHH
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK-----------ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1171 (1251)
..+..+...- .+...+||+.||+||.+.... .+.++||||+||++|+|+.|+.||+.-.+ .
T Consensus 507 ~aI~~DTTsI--~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~ 578 (677)
T KOG0596|consen 507 NAIQPDTTSI--VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------Q 578 (677)
T ss_pred cccCccccce--eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------H
Confidence 8876553332 223358999999999876433 45789999999999999999999964311 1
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
|.. . ..+.+....-.++... ...++.++|+.|+++||++|||..++++.
T Consensus 579 ~aK-l--------~aI~~P~~~Iefp~~~-~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 579 IAK-L--------HAITDPNHEIEFPDIP-ENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHH-H--------HhhcCCCccccccCCC-CchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 111 1 1111111100111111 11238899999999999999999998763
No 279
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=288.31 Aligned_cols=272 Identities=22% Similarity=0.347 Sum_probs=205.2
Q ss_pred CHHHHHHhhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeee
Q 000859 937 RWEDIMGATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCN 1014 (1251)
Q Consensus 937 ~~~~~~~~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 1014 (1251)
+++|.+..+.+ .||+|+|+.|--+ ...+|.+||||++.+.. ...+....+|++++.++ .|+||++++.+|.+
T Consensus 74 ~F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~-gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQP-GHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCC-chHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 45666666654 7999999999999 56789999999997664 34667888999999999 59999999999955
Q ss_pred cCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC-
Q 000859 1015 KGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME- 1093 (1251)
Q Consensus 1015 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~- 1093 (1251)
+...|+|||.|.||+|...+++ ++.+++.++.++..+|+.|+.|||.+ ||.|||+||+|||-.+...
T Consensus 148 --d~~FYLVfEKm~GGplLshI~~-------~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 148 --DTRFYLVFEKMRGGPLLSHIQK-------RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKV 215 (463)
T ss_pred --cceEEEEEecccCchHHHHHHH-------hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCc
Confidence 4557999999999999999987 56899999999999999999999999 9999999999999966543
Q ss_pred --eEEcccccccccccccCC---CCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhhCCCCCCCcc
Q 000859 1094 --AHLGDFGLAKALVEDYNS---NTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVSGKMPTDATF 1163 (1251)
Q Consensus 1094 --~kl~DfG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~ 1163 (1251)
||||||.++..+.....- .+..-...+|+..|||||++. ...|+.++|.||+||++|-|++|.+||.+.-
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 899999987654322111 111122357999999999753 3358999999999999999999999998776
Q ss_pred ccchhHHHHHHHHHhccchhhhhhhcccCCCCCCc--hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1164 GVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPG--EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
+.+..+.+- ...+..+...-+.+.+.. ..+|. +...+.+..+++...+..|+.+|-++.++++
T Consensus 296 g~dCGWdrG--e~Cr~CQ~~LFesIQEGk-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 296 GADCGWDRG--EVCRVCQNKLFESIQEGK-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCcCCccCC--CccHHHHHHHHHHHhccC-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 643322110 000000111111222211 12222 2336677888999999999999999999887
No 280
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-32 Score=306.45 Aligned_cols=237 Identities=26% Similarity=0.417 Sum_probs=187.2
Q ss_pred ceecccCCceEEEEEecCCc-----------EEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 952 FIIGSGGSGTVYKAELANGA-----------TVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+.||+|+||.||+|...+.. .||+|.+...... ...+.+|+.++++++||||++++|++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR---DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec---CCc
Confidence 36899999999999765322 5888887544332 5788999999999999999999998865 335
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-------C
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-------E 1093 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-------~ 1093 (1251)
++||||+++|+|.+++...+ ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~ 146 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREK------NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPF 146 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCcee
Confidence 89999999999999998642 3689999999999999999999999 999999999999999887 7
Q ss_pred eEEcccccccccccccCCCCcccceeecccceecccccccC--CCCCccceeehhHHHHHHhh-CCCCCCCccccchhHH
Q 000859 1094 AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL--KATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMV 1170 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~ 1170 (1251)
+|++|||+++.... .....++..|+|||++.+. .++.++|||||||++||+++ |..||......+ ..
T Consensus 147 ~kl~Dfg~a~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~~ 216 (259)
T cd05037 147 IKLSDPGIPITVLS--------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--KE 216 (259)
T ss_pred EEeCCCCccccccc--------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--HH
Confidence 99999999976432 1123566789999998876 78999999999999999999 577776543211 11
Q ss_pred HHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1171 RWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.+ .. ... ..+.+ ....+.+++.+||..+|.+|||+.++++.|
T Consensus 217 ~~---~~-----------~~~---~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 217 RF---YQ-----------DQH---RLPMP--DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HH---Hh-----------cCC---CCCCC--CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 10 00 000 01111 115788999999999999999999999876
No 281
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.1e-32 Score=308.16 Aligned_cols=262 Identities=23% Similarity=0.363 Sum_probs=200.0
Q ss_pred CCcCceecccCCceEEEEEec----CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCC----
Q 000859 948 LSDEFIIGSGGSGTVYKAELA----NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG---- 1018 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---- 1018 (1251)
|.+.+.||+|+||.||+|.+. +++.||||++.... .....+++.+|++++++++||||+++++++......
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456678999999999999643 36889999986543 333456788999999999999999999987654322
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++++||+++|+|.+++...... .....+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIG-EEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 236889999999999987543211 1123578999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||.++........ .......++..|++||......++.++|||||||++|||++ |+.||......+ ...+..
T Consensus 157 fg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--~~~~~~--- 229 (273)
T cd05074 157 FGLSKKIYSGDYY--RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--IYNYLI--- 229 (273)
T ss_pred ccccccccCCcce--ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--HHHHHH---
Confidence 9999865322111 11112345678999999988889999999999999999999 899987553211 111110
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
. . .........+..+.+++.+||+.+|++|||++++++.|+++
T Consensus 230 ~-----------~---~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 K-----------G---NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred c-----------C---CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0 00011112345789999999999999999999999999875
No 282
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=9.2e-33 Score=313.09 Aligned_cols=267 Identities=23% Similarity=0.322 Sum_probs=194.6
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... ....+.+.+|++++++++||||+++++++.+. ...++|+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD--KKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC--CceEEEE
Confidence 467788999999999999965 4689999999865432 22335678899999999999999999988643 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++ ++|.+++... ...+++..++.++.||++|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 79 e~~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 148 (284)
T cd07839 79 EYCD-QDLKKYFDSC------NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARA 148 (284)
T ss_pred ecCC-CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhc
Confidence 9997 5888888653 34689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch-
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS- 1182 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 1182 (1251)
..... .......++..|+|||.+.+. .++.++||||+||++|||+||+.|+......+................
T Consensus 149 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (284)
T cd07839 149 FGIPV----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEES 224 (284)
T ss_pred cCCCC----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHH
Confidence 53221 111224568899999988764 478999999999999999999988654333221111111000000000
Q ss_pred --hhhhhhcccCCCCCCc-------hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 --AREELLDDQMKPLLPG-------EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 --~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
......+....+..+. ....+.++.+++.+|++.||.+|||++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 225 WPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000000011100 0113467889999999999999999999976
No 283
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.2e-33 Score=313.71 Aligned_cols=268 Identities=23% Similarity=0.318 Sum_probs=195.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.. +...++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 477788999999999999965 4689999999865432 2234678899999999999999999998865 34579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++ ++|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 79 e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 150 (285)
T cd07861 79 EFLS-MDLKKYLDSLP----KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARA 150 (285)
T ss_pred ecCC-CCHHHHHhcCC----CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceee
Confidence 9997 68999886532 135689999999999999999999999 999999999999999999999999999875
Q ss_pred cccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc--
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG-- 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 1181 (1251)
.... ........++..|+|||.+.+. .++.++||||+||++|||+||+.||.+....+. .............
T Consensus 151 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 225 (285)
T cd07861 151 FGIP----VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDV 225 (285)
T ss_pred cCCC----cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhh
Confidence 4321 1111223568899999987654 578899999999999999999999976533211 1111110000000
Q ss_pred -------hhhhhhhcccCCCCC-CchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 -------SAREELLDDQMKPLL-PGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 -------~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
............... ......+.++.+++.+||+.||++|||++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 226 WPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000000 001113566789999999999999999999875
No 284
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.1e-32 Score=305.44 Aligned_cols=251 Identities=30% Similarity=0.514 Sum_probs=199.0
Q ss_pred CcCceecccCCceEEEEEecC-----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 949 SDEFIIGSGGSGTVYKAELAN-----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 949 ~~~~~lG~G~fg~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++.+.||+|+||.||+|.... +..||+|++.........+.+.+|+++++.++|+||+++++++... ...+++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~i 79 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPLMIV 79 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--CeeEEE
Confidence 456789999999999996653 3889999997655544567899999999999999999999988654 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||.++
T Consensus 80 ~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~ 151 (258)
T smart00219 80 MEYMEGGDLLDYLRKNR-----PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSR 151 (258)
T ss_pred EeccCCCCHHHHHHhhh-----hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCce
Confidence 99999999999997642 12289999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.......... ....++..|+|||.+.+..++.++||||+|+++|||++ |+.||......+ ......
T Consensus 152 ~~~~~~~~~~---~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~----- 218 (258)
T smart00219 152 DLYDDDYYKK---KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-----VLEYLK----- 218 (258)
T ss_pred eccccccccc---ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHh-----
Confidence 6643311111 11236789999999988889999999999999999998 888886532211 111100
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
... ..+.+...+.++.+++.+|++.||++|||++|+++.|
T Consensus 219 ------~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 ------KGY---RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------cCC---CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000 0111222556789999999999999999999998764
No 285
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.8e-32 Score=305.51 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=199.6
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||++. ..+|+.||+|++.... .....+.+.+|+.++++++||||+++++++.. ....++|+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE--NGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC--CCeEEEEE
Confidence 47788899999999999995 4578999999986432 33345678999999999999999999998754 34679999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.... ...+++.++.+++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+..
T Consensus 79 e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~ 150 (256)
T cd08218 79 DYCEGGDLYKKINAQR-----GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARV 150 (256)
T ss_pred ecCCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceee
Confidence 9999999999997632 23578999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
...... ......|+..|+|||+..+..++.++|+|||||++||+++|+.||......+ .+.
T Consensus 151 ~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-----~~~---------- 211 (256)
T cd08218 151 LNSTVE----LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN-----LVL---------- 211 (256)
T ss_pred cCcchh----hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH-----HHH----------
Confidence 532211 1122457889999999988889999999999999999999999986542211 111
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....... + +.+...+.++.+++.+||+.+|++||++++|++.
T Consensus 212 -~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 212 -KIIRGSY-P--PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -HHhcCCC-C--CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111110 1 1122345678999999999999999999999863
No 286
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-33 Score=328.82 Aligned_cols=265 Identities=20% Similarity=0.255 Sum_probs=193.7
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
...|.+.+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|+|||++++++... ...++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~--~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVG--GLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEEC--CEEEEE
Confidence 446888999999999999999654 578999996421 3456899999999999999999987654 446899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
||++. ++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 239 ~e~~~-~~L~~~l~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 239 LPKYR-SDLYTYLGAR------LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred EEccC-CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCce
Confidence 99995 7999998754 24689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCcccc------chhHHHHHHHHH
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGV------EMDMVRWVEMHM 1177 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~------~~~~~~~~~~~~ 1177 (1251)
....... ........||..|+|||++.+..++.++|||||||++|||++|..|+...... .......+....
T Consensus 309 ~~~~~~~--~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~ 386 (461)
T PHA03211 309 FARGSWS--TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQ 386 (461)
T ss_pred ecccccc--cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhc
Confidence 6532211 11122357999999999999999999999999999999999987664322111 111111111110
Q ss_pred hccch--------hhhhhhc---ccCCCCCCc--h---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1178 EMSGS--------AREELLD---DQMKPLLPG--E---ECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~--------~~~~~~~---~~~~~~~~~--~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..... ....+.. ....+.... . .....++.+++.+||+.||.+|||++|+++.
T Consensus 387 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 387 VHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 0000000 000111100 1 1123468899999999999999999999874
No 287
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.6e-32 Score=316.10 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=200.2
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCch--hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDH--LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|+..+.||+|+||.||+|... +++.||+|.+...... ...+.+..|+++++.++||||+++++++.. ....++|
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 79 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT--ETYLCLV 79 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec--CCEEEEE
Confidence 5788889999999999999654 5899999999755432 245678899999999999999999998754 4457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+.+++|.+++...+ ...+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 80 ~e~~~~~~L~~~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 80 MDYCPGGELFRLLQRQP-----GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred EEecCCCCHHHHHHhCC-----CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhh
Confidence 99999999999997643 35689999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCC-------------------------CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCC
Q 000859 1104 ALVEDYNSN-------------------------TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMP 1158 (1251)
Q Consensus 1104 ~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p 1158 (1251)
......... ........||..|+|||++.+..++.++||||||+++|+|++|+.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~p 231 (316)
T cd05574 152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP 231 (316)
T ss_pred cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCC
Confidence 543221110 0011124688999999999988899999999999999999999999
Q ss_pred CCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 000859 1159 TDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS----SRQVCD 1229 (1251)
Q Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 1229 (1251)
|.+....+. +. ...... ...+.....+..+.+++.+|++.||++||| ++|+++
T Consensus 232 f~~~~~~~~----~~------------~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 232 FKGSNRDET----FS------------NILKKE--VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCCchHHH----HH------------HHhcCC--ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 975532211 00 001100 111122225677999999999999999999 666655
No 288
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-32 Score=320.22 Aligned_cols=192 Identities=23% Similarity=0.345 Sum_probs=161.1
Q ss_pred hhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
...+|.+.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++... ...++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSG--AITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeC--CeeEE
Confidence 3457999999999999999999654 5688999985322 234699999999999999999988654 34689
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+||+. |+|.+++... ...+++..+.+++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 135 v~e~~~-~~l~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 204 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKR------SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAA 204 (357)
T ss_pred EEEccC-CcHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccc
Confidence 999995 6899998754 35689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCC
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPT 1159 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~ 1159 (1251)
+..... .......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 205 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 205 QFPVVA-----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccC-----cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 643211 1122356899999999999999999999999999999999854443
No 289
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.3e-33 Score=326.96 Aligned_cols=265 Identities=21% Similarity=0.273 Sum_probs=196.7
Q ss_pred hcCCCcCceecccCCceEEEEEec---CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA---NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
..+|.+.+.||+|+||.||+|... .+..||||.+... +...+|++++++++|||||++++++... ...+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWK--STVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeC--CEEE
Confidence 346889999999999999999643 3578999988532 2346899999999999999999988543 4578
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|||++. ++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 163 lv~e~~~-~~l~~~l~~-------~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~ 231 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDR-------SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGA 231 (392)
T ss_pred EEehhcC-CCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcc
Confidence 9999995 689998854 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccch--hHHHHHHHHHh-
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEM--DMVRWVEMHME- 1178 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~- 1178 (1251)
++....... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... .+.........
T Consensus 232 a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~ 309 (392)
T PHA03207 232 ACKLDAHPD--TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVH 309 (392)
T ss_pred ccccCcccc--cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccC
Confidence 976543211 1122235789999999999999999999999999999999999999965433211 11111111000
Q ss_pred ---ccchh----hhhh--hcccCCCCCCch-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1179 ---MSGSA----REEL--LDDQMKPLLPGE-----ECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1179 ---~~~~~----~~~~--~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..... .... .....++....+ ...+.++.+++.+|+..||++|||++|++..
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 310 PLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 0000 000111111111 1134568899999999999999999999875
No 290
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-32 Score=312.02 Aligned_cols=270 Identities=22% Similarity=0.259 Sum_probs=197.6
Q ss_pred hhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++.+|...+.||+|+||.||+|.. .+++.||+|++...........+.+|+++++.++|+||+++++++.. ....++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeEEE
Confidence 456789999999999999999954 56899999999765544444577899999999999999999998754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+||++ +++.+++... ...+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++
T Consensus 81 v~e~~~-~~l~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 81 VFEYMH-TDLAQYMIQH------PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred EEeccc-CCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccc
Confidence 999995 7888877543 24578888999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc-
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS- 1180 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 1180 (1251)
+...... .......++..|+|||.+.+. .++.++||||+||++|||++|+.||++.........+.........
T Consensus 151 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T cd07870 151 RAKSIPS----QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTE 226 (291)
T ss_pred cccCCCC----CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCCh
Confidence 7542211 111223568899999998754 5788999999999999999999999765432221111111000000
Q ss_pred ---------chhhhhhhcccCCCCCC---chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 ---------GSAREELLDDQMKPLLP---GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ---------~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.....++.......... .....+.++.+++.+|++.||++|||++|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 227 DTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000100000000000 00012456889999999999999999999875
No 291
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-32 Score=312.86 Aligned_cols=245 Identities=22% Similarity=0.374 Sum_probs=194.7
Q ss_pred CceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 951 EFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
...||+|+||.||++.. .++..||||++.... ....+.+.+|+.+++.++||||+++++.+.. ....++||||+++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~lv~e~~~~ 103 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDELWVVMEFLEG 103 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCeEEEEEeCCCC
Confidence 35699999999999954 468899999986433 3345678899999999999999999998754 3457999999999
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
++|.+++.. ..+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 104 ~~L~~~~~~--------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 104 GALTDIVTH--------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 999998854 3478999999999999999999999 99999999999999999999999999987543221
Q ss_pred CCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhc
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLD 1189 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1189 (1251)
.......|+..|+|||...+..++.++|||||||++||+++|+.||........ .... .
T Consensus 173 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~~~------------~ 231 (292)
T cd06658 173 ----PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-----MRRI------------R 231 (292)
T ss_pred ----ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHH------------H
Confidence 112235688999999999888899999999999999999999999975422111 0000 0
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1190 DQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1190 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....+..+.....+..+.+++.+|+..||.+|||++|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 232 DNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred hcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00111111222244568899999999999999999999874
No 292
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.3e-32 Score=303.83 Aligned_cols=248 Identities=28% Similarity=0.421 Sum_probs=197.3
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc----hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD----HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
+|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|+++++.++|+||+++++++... ...+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE--DNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC--CeEE
Confidence 3677789999999999999665 789999999865431 23456788999999999999999999987543 4579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+++||+++++|.+++... ..+++..+..++.|+++|++|||+. +|+|+||+|+||+++.++.+||+|||.
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~ 148 (258)
T cd06632 79 IFLELVPGGSLAKLLKKY-------GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGM 148 (258)
T ss_pred EEEEecCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCcc
Confidence 999999999999999763 4588999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCC-CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK-ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+....... ......|+..|+|||.+.... ++.++|+|||||++|++++|+.||......+. .....
T Consensus 149 ~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~-----~~~~~--- 215 (258)
T cd06632 149 AKQVVEFS-----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA-----VFKIG--- 215 (258)
T ss_pred ceeccccc-----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH-----HHHHH---
Confidence 87653221 122356789999999987766 89999999999999999999999976532111 00000
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.....+.. +.....++.+++.+||+.+|++||++++++.
T Consensus 216 --------~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 216 --------RSKELPPI--PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------hcccCCCc--CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 00000111 1224566889999999999999999999875
No 293
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.3e-33 Score=309.40 Aligned_cols=239 Identities=22% Similarity=0.368 Sum_probs=185.0
Q ss_pred eecccCCceEEEEEecC--------CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 953 IIGSGGSGTVYKAELAN--------GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.||+|+||.||+|.... ..+||+|.+... .....+.+.+|+.+++.++||||+++++++... ...++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCcEEEE
Confidence 69999999999996532 235888887533 233456788999999999999999999988654 3468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC--------eEE
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME--------AHL 1096 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--------~kl 1096 (1251)
||+++|+|.++++.. ...+++..+..++.||+.|++|||+. +|+||||||+||+++.++. +++
T Consensus 79 e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 79 EYVKFGSLDTYLKKN------KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred ecCCCCcHHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEe
Confidence 999999999999864 23688999999999999999999999 9999999999999987765 699
Q ss_pred cccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCC-CCCCCccccchhHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGK-MPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~-~p~~~~~~~~~~~~~~~~ 1174 (1251)
+|||.+..... .....++..|+|||++.+ ..++.++|||||||++||+++|. .||........ ..
T Consensus 150 ~d~g~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-----~~ 216 (258)
T cd05078 150 SDPGISITVLP--------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-----LQ 216 (258)
T ss_pred cccccccccCC--------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-----HH
Confidence 99998865422 122457889999999876 45799999999999999999984 66543321110 00
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.. .. ....+. ....++.+++.+||+.||++|||++++++.|.
T Consensus 217 ~~------------~~--~~~~~~--~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 FY------------ED--RHQLPA--PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HH------------Hc--cccCCC--CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 00 011111 12356889999999999999999999998863
No 294
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3e-32 Score=309.27 Aligned_cols=265 Identities=23% Similarity=0.322 Sum_probs=197.3
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|..+ +++.||+|++.... .....+.+.+|++++++++|||++++++++.. ....++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v~ 79 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLVF 79 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEEE
Confidence 5788889999999999999664 68999999986443 22234667899999999999999999998865 34578999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++++++..+... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 80 e~~~~~~l~~~~~~-------~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 80 EYCDHTVLNELEKN-------PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred eccCccHHHHHHhC-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccccee
Confidence 99999888877654 34589999999999999999999998 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+... .. ..........
T Consensus 150 ~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~-~~-~~~~~~~~~~ 223 (286)
T cd07847 150 LTGPGD----DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY-LI-RKTLGDLIPR 223 (286)
T ss_pred cCCCcc----cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH-HH-HHHhCCCChH
Confidence 533211 1223457889999998875 557899999999999999999999997654322111 11 1100000000
Q ss_pred hhhhhc------ccCCCC----CCc---hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 REELLD------DQMKPL----LPG---EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~~~~~~------~~~~~~----~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.....+ ....+. .+. ....+..+.+++.+||+.||++||++.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 224 HQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 000000 000 0113466889999999999999999999875
No 295
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.7e-32 Score=305.99 Aligned_cols=254 Identities=25% Similarity=0.432 Sum_probs=195.1
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc---------hhhhHHHHHHHHHHHhccCCCccceeceeeecC
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD---------HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 1016 (1251)
+|...+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|+.+++.++|||++++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 366778999999999999954 4689999998853221 1123567889999999999999999998754
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEE
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHL 1096 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 1096 (1251)
....++||||+++|+|.+++++. ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l 149 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTY-------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKI 149 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEE
Confidence 45579999999999999999763 4688999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccCC--CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK--ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1174 (1251)
+|||.++....... ........|+..|+|||.+.... ++.++|+||+|+++||+++|+.||......+ ...+
T Consensus 150 ~d~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~ 223 (272)
T cd06629 150 SDFGISKKSDDIYD--NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA----AMFK 223 (272)
T ss_pred eecccccccccccc--ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH----HHHH
Confidence 99999875432211 11122346789999999987654 8899999999999999999999986432211 1110
Q ss_pred HHHhccchhhhhhhcccCCCCCCc--hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPG--EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. .....+..+. ....+.++.+++.+|++.||++|||+++|++.
T Consensus 224 ~~------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 224 LG------------NKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred hh------------ccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00 0000011111 11235678899999999999999999998863
No 296
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.6e-32 Score=306.64 Aligned_cols=257 Identities=28% Similarity=0.389 Sum_probs=201.0
Q ss_pred hhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecC----C
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKG----A 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~----~ 1017 (1251)
.+++|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++++ +|+||+++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4578999999999999999999664 678999999865433 346789999999999 7999999999887644 3
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++||||+++++|.+++.... .....+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLR---KKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEEC
Confidence 45689999999999999986531 1135689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceeccccccc-----CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRW 1172 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1172 (1251)
|||.+....... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||........ .
T Consensus 156 d~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~ 227 (275)
T cd06608 156 DFGVSAQLDSTL----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA----L 227 (275)
T ss_pred CCccceecccch----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH----H
Confidence 999987643221 11223468899999998753 3467899999999999999999999965422111 0
Q ss_pred HHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1173 VEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
. .... ...+........+.++.+++.+||..||++|||++|+++
T Consensus 228 ~------------~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 228 F------------KIPR-NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred H------------Hhhc-cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 0000 011122223335567899999999999999999999975
No 297
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.2e-32 Score=303.57 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=198.1
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++.+.. ....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE--DKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec--CCEEEEEE
Confidence 477788999999999999954 578899999986543 33345788899999999999999999997754 44579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-CCeEEccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-MEAHLGDFGLAK 1103 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~ 1103 (1251)
||+++++|.+++.... ...+++..+.+++.|+++|++|||++ +|+||||||+||+++++ +.+|++|||.+.
T Consensus 79 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (256)
T cd08220 79 EYAPGGTLAEYIQKRC-----NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISK 150 (256)
T ss_pred ecCCCCCHHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCce
Confidence 9999999999997642 34589999999999999999999999 99999999999999865 468999999997
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||....... ......
T Consensus 151 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-----~~~~~~------ 214 (256)
T cd08220 151 ILSSKS-----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA-----LVLKIM------ 214 (256)
T ss_pred ecCCCc-----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH-----HHHHHH------
Confidence 653221 1122467889999999998889999999999999999999999997543211 111100
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... ..+.+...+.++.+++.+||+.+|++|||++|++..
T Consensus 215 -----~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 215 -----SGT---FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -----hcC---CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 000 011112245678899999999999999999999863
No 298
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.8e-32 Score=310.29 Aligned_cols=269 Identities=20% Similarity=0.284 Sum_probs=195.6
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
.++|+..+.||+|+||.||+|..+ +++.||||.+...........+.+|++++++++||||+++++++.. ....++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT--KKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec--CCeEEEE
Confidence 356888899999999999999654 6899999998754433334557789999999999999999998854 3457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++ ++|.+++... ...+++..++.++.|+++|++|||+. +|+||||||+||++++++.+||+|||.++
T Consensus 82 ~e~~~-~~L~~~~~~~------~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 151 (291)
T cd07844 82 FEYLD-TDLKQYMDDC------GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151 (291)
T ss_pred EecCC-CCHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccc
Confidence 99997 4999998764 24678999999999999999999999 99999999999999999999999999986
Q ss_pred ccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
...... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.......................
T Consensus 152 ~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (291)
T cd07844 152 AKSVPS----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEE 227 (291)
T ss_pred ccCCCC----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChh
Confidence 532111 11112346789999998875 4588999999999999999999999975542221111111100000000
Q ss_pred hhhhh------hcccCCCCCCc-------hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 AREEL------LDDQMKPLLPG-------EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~------~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... .........+. ......++.+++.+|++.+|++|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 228 TWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000 00000000000 0001256789999999999999999999875
No 299
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.6e-32 Score=306.96 Aligned_cols=249 Identities=25% Similarity=0.378 Sum_probs=197.9
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc---CCCccceeceeeecCCCceeE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR---HRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.|+..+.||+|+||.||+|.. .+++.||+|.+.........+.+.+|++++++++ |||++++++++.. ....++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~--~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK--GPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee--CCEEEE
Confidence 466778899999999999964 5789999999876555555677889999999996 9999999998754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++++|.++++. ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++++|||.+
T Consensus 80 v~e~~~~~~L~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06917 80 IMEYAEGGSVRTLMKA--------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVA 148 (277)
T ss_pred EEecCCCCcHHHHHHc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCce
Confidence 9999999999999864 2588999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
..+.... .......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||....... ....
T Consensus 149 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-----~~~~------ 213 (277)
T cd06917 149 ALLNQNS----SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR-----AMML------ 213 (277)
T ss_pred eecCCCc----cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh-----hhhc------
Confidence 7654322 11223468899999998865 447899999999999999999999997542211 1000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
......+..+. ...+.++.+++.+||+.||++||++.|+++.
T Consensus 214 ------~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 214 ------IPKSKPPRLED-NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ------cccCCCCCCCc-ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 00001111111 1145678999999999999999999999864
No 300
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=289.89 Aligned_cols=256 Identities=27% Similarity=0.365 Sum_probs=196.2
Q ss_pred CCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+.+....||.|+||+|++- ....|+..|||+++....+.+.+++..|.+...+- +.||||++||++..+++ +|+.|
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--cWiCM 142 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--CWICM 142 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc--eeeeH
Confidence 3445567999999999999 55679999999999888888888999999876555 79999999998876544 69999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|.|+- ++..+-+.- .......+++...-+|..-.+.|+.||.+.. +|||||+||+|||++..|.+|+||||.+-.
T Consensus 143 ELMd~-SlDklYk~v--y~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 143 ELMDI-SLDKLYKRV--YSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred HHHhh-hHHHHHHHH--HHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHh
Confidence 99974 555443321 0112456888888889999999999999874 899999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceeccccccc--CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYS--LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+... ...+.-+|...|||||.+.. ..|+.+|||||+|+++||+.||..||......- +.+.
T Consensus 218 Lv~S-----iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf----eql~-------- 280 (361)
T KOG1006|consen 218 LVDS-----IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF----EQLC-------- 280 (361)
T ss_pred HHHH-----HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH----HHHH--------
Confidence 5432 23334578899999998863 358999999999999999999999997542211 1111
Q ss_pred hhhhhhcccCCCCCCchH---HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEE---CAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+... -.|.+..+. .....+..++.-|+.+|-..||++.++.+.
T Consensus 281 ---~Vv~g-dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 281 ---QVVIG-DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ---HHHcC-CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11111 112222222 255678999999999999999999998753
No 301
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.7e-33 Score=331.46 Aligned_cols=252 Identities=29% Similarity=0.445 Sum_probs=189.6
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecC--------
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG-------- 1016 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-------- 1016 (1251)
++|+....||+||||.||+++.+ ||+.||||++...........+.+|+..+++++|||||+++..+.+..
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 45677779999999999999654 899999999988876777788899999999999999999875222110
Q ss_pred --------------------------------------------------------------------------------
Q 000859 1017 -------------------------------------------------------------------------------- 1016 (1251)
Q Consensus 1017 -------------------------------------------------------------------------------- 1016 (1251)
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence
Q ss_pred -----------------------------CCceeEEEeecCCCChHHhhhcCCCCcccCCCC-CHHHHHHHHHHHHHHHH
Q 000859 1017 -----------------------------AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSL-DWEARLKIAVGLAQGVE 1066 (1251)
Q Consensus 1017 -----------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l-~~~~~~~i~~~i~~~l~ 1066 (1251)
+...||=||||+.-++.++++++. .. .....++++++|++|++
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-------~~~~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-------FNSQRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-------cchhhHHHHHHHHHHHHHHH
Confidence 022467888888877777776532 11 46788999999999999
Q ss_pred HhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc--------------ccCCCCcccceeecccceecccccc
Q 000859 1067 YLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE--------------DYNSNTESNTWFAGSYGYIAPEYAY 1132 (1251)
Q Consensus 1067 ~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--------------~~~~~~~~~~~~~gt~~y~aPE~~~ 1132 (1251)
|+|+. |||||||||.||+++++..|||+|||+|+.... .........+..+||.-|+|||++.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999 999999999999999999999999999987320 0111222445679999999999987
Q ss_pred cC---CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCch----HHHHHH
Q 000859 1133 SL---KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGE----ECAAYQ 1205 (1251)
Q Consensus 1133 ~~---~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 1205 (1251)
+. .|+.|+|+||+|||++||+ .||... +..... +.....+.+|.+ ....+.
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~Ts----MERa~i---------------L~~LR~g~iP~~~~f~~~~~~~ 846 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEML---YPFGTS----MERASI---------------LTNLRKGSIPEPADFFDPEHPE 846 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHh---ccCCch----HHHHHH---------------HHhcccCCCCCCcccccccchH
Confidence 55 4999999999999999998 345432 111111 111112222222 122234
Q ss_pred HHHHHHHccccCCCCCCCHHHHHH
Q 000859 1206 VLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1206 l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
-.++|.++++.||.+||||.|+++
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhh
Confidence 468999999999999999999875
No 302
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.98 E-value=2.4e-32 Score=310.08 Aligned_cols=267 Identities=26% Similarity=0.395 Sum_probs=197.4
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|+..+.||+|+||.||+|..+ +++.||+|++...... ...+.+.+|+++++.++||||+++++++.. +...++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR--KKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc--CCeEEEE
Confidence 35788899999999999999764 5899999998644322 245678899999999999999999998854 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
+||++++++.++... ...+++.++..++.|+++|++|||+. +++|||++|+||++++++.++++|||++.
T Consensus 79 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~ 148 (286)
T cd07846 79 FEFVDHTVLDDLEKY-------PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 148 (286)
T ss_pred EecCCccHHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeee
Confidence 999999988887654 23589999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.+.... .......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ..............
T Consensus 149 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 223 (286)
T cd07846 149 TLAAPG----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ-LYHIIKCLGNLIPR 223 (286)
T ss_pred eccCCc----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHH-HHHHHHHhCCCchh
Confidence 653321 11223467899999998875 4578899999999999999999999975432211 00100000000000
Q ss_pred hhh-----hhhcccCCCCCCc-------hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 ARE-----ELLDDQMKPLLPG-------EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~-----~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... ........+.... ....+..+.+++.+||+.+|++||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 224 HQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 0000000011000 1123567899999999999999999999875
No 303
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=2.7e-32 Score=310.03 Aligned_cols=245 Identities=23% Similarity=0.323 Sum_probs=196.8
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--DSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCeEEE
Confidence 3578888999999999999965 468999999986432 22344678899999999999999999998754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++++|.+++... ..+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.+||+|||++
T Consensus 79 v~e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~ 148 (290)
T cd05580 79 VMEYVPGGELFSHLRKS-------GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFA 148 (290)
T ss_pred EEecCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999999763 5689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+..... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||......+ .. .
T Consensus 149 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~---~-------- 208 (290)
T cd05580 149 KRVKGR-------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ--IY---E-------- 208 (290)
T ss_pred cccCCC-------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HH---H--------
Confidence 765322 223468899999999988889999999999999999999999997543110 00 0
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1229 (1251)
.... ...+.+...+..+.+++.+||..||.+|| +++|+++
T Consensus 209 ---~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 209 ---KILE----GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---HHhc----CCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0000 01111122356788999999999999999 7777764
No 304
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=7.4e-32 Score=301.96 Aligned_cols=254 Identities=25% Similarity=0.342 Sum_probs=199.5
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC----chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD----DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
.+|+..+.||+|+||.||+|.. .++..||+|++.... .....+.+.+|++++++++||||+++++++........
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688889999999999999954 568999999875321 23345678899999999999999999998866555667
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++++||+++++|.+++... ..+++..+.+++.|++.|++|||+. +++|+||||+||+++.++.++|+|||
T Consensus 82 ~~v~e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 151 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY-------GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccc
Confidence 8999999999999998753 4578899999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
.++........ ........|+..|+|||.+.+..++.++|+|||||++||+++|+.||......+. +
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~------- 218 (264)
T cd06653 152 ASKRIQTICMS-GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA-----I------- 218 (264)
T ss_pred ccccccccccc-CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH-----H-------
Confidence 99765322111 1111234688999999999888899999999999999999999999975422110 0
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.........+.. +....+.+.+++.+|++ +|.+||++.+++.
T Consensus 219 ----~~~~~~~~~~~~--p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 ----FKIATQPTKPML--PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----HHHHcCCCCCCC--CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 000000011111 23345678999999999 5799999998875
No 305
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.98 E-value=7.2e-32 Score=305.46 Aligned_cols=265 Identities=21% Similarity=0.274 Sum_probs=195.0
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|+..+.||+|+||.||+|.. .+++.||+|+++............+|+.+++++. |+|++++++++.+......++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 55677899999999999954 5689999999875433333345567999999985 999999999987664466899999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|++ |++.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++. +.+||+|||.++..
T Consensus 81 ~~~-~~l~~~l~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 81 LMD-MNLYELIKGR------KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred cCC-ccHHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 997 5888888753 24689999999999999999999999 9999999999999999 99999999999765
Q ss_pred ccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... ......++..|+|||.+.. ..++.++||||+||++|||++|+.||.+....+ ...+............
T Consensus 150 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~ 222 (282)
T cd07831 150 YSKP-----PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTPDAEV 222 (282)
T ss_pred ccCC-----CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCCCHHH
Confidence 3221 1122457889999997654 557889999999999999999999997653322 1111111110000000
Q ss_pred hhhhccc--CCCCCC---------chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQ--MKPLLP---------GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~--~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....... .....+ .....+.++.+++.+||+.+|++||+++++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 223 LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000 000000 011245789999999999999999999999863
No 306
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=5e-32 Score=306.96 Aligned_cols=254 Identities=27% Similarity=0.402 Sum_probs=192.5
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHH-HHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKT-LGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|+..+.||+|+||.||+|.. .+|+.||+|++...........+..|+.+ ++..+||||+++++++... ...+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~--~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE--GDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC--CcEEEE
Confidence 3678888999999999999965 46999999998755433344556667765 5556899999999988653 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++ |+|.+++.... .....+++..+..++.|++.|++|||++. +++||||||+||+++.++.+||+|||.++
T Consensus 79 ~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 79 MEVMD-TSLDKFYKKVY---DKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred hhhhc-ccHHHHHHHhc---cCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99996 68988886532 11356899999999999999999999842 79999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceeccccccc----CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYS----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
..... .......|+..|+|||.+.+ ..++.++|+||+||++|||++|+.||............
T Consensus 153 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-------- 219 (283)
T cd06617 153 YLVDS-----VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-------- 219 (283)
T ss_pred ccccc-----cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH--------
Confidence 65321 11222467889999998764 45688999999999999999999999643221111110
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... ...+..+ ....+.++.+++.+||+.+|++||+++++++
T Consensus 220 -------~~~-~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 220 -------VVE-EPSPQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -------HHh-cCCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0011111 1124567899999999999999999999986
No 307
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.98 E-value=4.6e-32 Score=304.73 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=198.4
Q ss_pred CCCcCceecccCCceEEEEEecC--CcEEEEEEeccCC---------chhhhHHHHHHHHHHHh-ccCCCccceeceeee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELAN--GATVAVKKISCKD---------DHLLNKSFTREVKTLGR-IRHRHLVKLMGHCCN 1014 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~--~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~ 1014 (1251)
.|+..+.||+|+||.||+|.... ++.||+|.+.... .....+++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36777889999999999997654 6889999885322 22334567788888875 699999999998865
Q ss_pred cCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCC
Q 000859 1015 KGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNME 1093 (1251)
Q Consensus 1015 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~ 1093 (1251)
....+++|||+++++|.+++.... .....+++..+++++.|++.|++|||+ . +++|+||+|+||++++++.
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~ 152 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLK---EKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDK 152 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCc
Confidence 345799999999999999885421 113568999999999999999999996 5 8999999999999999999
Q ss_pred eEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHH
Q 000859 1094 AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWV 1173 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1173 (1251)
+||+|||.+....... ......|+..|+|||.+.+..++.++||||||+++||+++|+.||...... ...
T Consensus 153 ~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-----~~~ 222 (269)
T cd08528 153 VTITDFGLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-----SLA 222 (269)
T ss_pred EEEecccceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-----HHH
Confidence 9999999997643221 223356889999999999888999999999999999999999998644211 111
Q ss_pred HHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1174 EMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
.. .......+. .....+.++.+++.+||+.||++||++.|+..++++
T Consensus 223 ~~-----------~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 223 TK-----------IVEAVYEPL--PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred HH-----------HhhccCCcC--CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11 111111111 111245678999999999999999999999998763
No 308
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=3.9e-32 Score=310.95 Aligned_cols=259 Identities=22% Similarity=0.293 Sum_probs=198.3
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|+..+.||+|+||.||++.. .+++.||+|.+..... ....+.+.+|+++++.++||||+++++.+.. +...++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET--KRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--CCEEEE
Confidence 3678889999999999999965 4578999999865432 2334678899999999999999999998754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++|+|.+++... +.+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 79 v~e~~~g~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~ 148 (305)
T cd05609 79 VMEYVEGGDCATLLKNI-------GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 148 (305)
T ss_pred EEecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCc
Confidence 99999999999999763 4689999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCC-----------CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHH
Q 000859 1103 KALVEDYNSN-----------TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1103 ~~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1171 (1251)
+......... ........|+..|+|||.+.+..++.++|+|||||++||+++|+.||.+....+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~----- 223 (305)
T cd05609 149 KIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE----- 223 (305)
T ss_pred cccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----
Confidence 6421110000 001112357889999999988889999999999999999999999997542211
Q ss_pred HHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1172 WVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
+..... .... .........+.++.+++.+||+.||++||++.++.+.++.
T Consensus 224 ~~~~~~-----------~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 224 LFGQVI-----------SDDI-EWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHH-----------hccc-CCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111100 0000 0000111345668999999999999999997666666655
No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.98 E-value=4.8e-32 Score=308.06 Aligned_cols=250 Identities=24% Similarity=0.371 Sum_probs=200.0
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.+|...+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.++++++||||+++++++... ...++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVG--DELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeC--CcEEEEE
Confidence 5688889999999999999954 4688999999864332 3456788999999999999999999988653 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +++|||+||+||+++.++.+||+|||.+..
T Consensus 96 e~~~~~~L~~~~~~--------~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~ 164 (293)
T cd06647 96 EYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 164 (293)
T ss_pred ecCCCCcHHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceec
Confidence 99999999999875 3478899999999999999999999 999999999999999999999999998865
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......|++.|+|||.+.+..++.++|+|||||++||+++|+.||......+....
T Consensus 165 ~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-------------- 226 (293)
T cd06647 165 ITPEQ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------------- 226 (293)
T ss_pred ccccc----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee--------------
Confidence 43221 112234688899999999888899999999999999999999999975422111000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
......+..+.....+..+.+++.+||+.+|++||++++++.+
T Consensus 227 ---~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 227 ---IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ---hhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000112222233345678899999999999999999999865
No 310
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=2.5e-32 Score=316.97 Aligned_cols=278 Identities=23% Similarity=0.326 Sum_probs=202.5
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCC---Cce
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---GSN 1020 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---~~~ 1020 (1251)
..+|.+.+.||+|+||.||+|. ..+|+.||||++...........+.+|+.++++++||||+++++++..... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 4578899999999999999995 457899999998654444455678899999999999999999997754322 246
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++|+||++ +++.+++.. ..+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 84 ~lv~e~~~-~~l~~~~~~--------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 84 YIVQELME-TDLYKLIKT--------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred EEEehhcc-cCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccc
Confidence 89999996 588887764 4589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+++........ ........||..|+|||.+.+ ..++.++||||+||++|||++|+.||.+..... ....+.......
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~ 229 (336)
T cd07849 152 LARIADPEHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTP 229 (336)
T ss_pred ceeeccccccc-cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCC
Confidence 98765332211 112223568899999998654 568899999999999999999999996542211 111111000000
Q ss_pred cchhhh--------hhhccc-CCCCCCch---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhcC
Q 000859 1180 SGSARE--------ELLDDQ-MKPLLPGE---ECAAYQVLEIALQCTKTSPQERPSSRQVCDL--LLNVFN 1236 (1251)
Q Consensus 1180 ~~~~~~--------~~~~~~-~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~~~~ 1236 (1251)
...... ...... ..+..+.. ...+.++.+++.+||+.||++|||++|+++. +++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 230 SQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred CHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 000000 000000 00011100 1134668899999999999999999999987 665554
No 311
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.98 E-value=2.3e-33 Score=287.74 Aligned_cols=277 Identities=22% Similarity=0.295 Sum_probs=201.3
Q ss_pred cCCCcCceecccCCceEEEEE-ecC----CcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 946 NNLSDEFIIGSGGSGTVYKAE-LAN----GATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~-~~~----~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
..|+....||+|.||.||+|. .++ ...+|||+++...+. .......+|+..++.++||||+.+..++... +..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-DKK 102 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-Cce
Confidence 457888899999999999993 322 237999999755322 2346778999999999999999999988765 677
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC----CCeE
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN----MEAH 1095 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~k 1095 (1251)
.++++||++. +|++.++-++.. ..+.++...+..|..||+.|+.|||+. =|+|||+||.||||..+ |.||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~--~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRAS--KAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccc--hhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeE
Confidence 8999999986 999999876532 236889999999999999999999999 78999999999999877 9999
Q ss_pred EcccccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccch----hHH
Q 000859 1096 LGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEM----DMV 1170 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~----~~~ 1170 (1251)
|+|||+|+.+...-.. .......+-|..|+|||.+.+. .|+.+.||||+||++.||+|-++-|.+....-. ...
T Consensus 177 IaDlGlaR~~~~plkp-l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~ 255 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKP-LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH 255 (438)
T ss_pred eecccHHHHhhccccc-cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence 9999999987544322 2223346789999999998875 589999999999999999999888865432110 011
Q ss_pred HHHHHHHhccchhhhh-hhc----------------ccCCCC-CC----chHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 000859 1171 RWVEMHMEMSGSAREE-LLD----------------DQMKPL-LP----GEECAAYQVLEIALQCTKTSPQERPSSRQVC 1228 (1251)
Q Consensus 1171 ~~~~~~~~~~~~~~~~-~~~----------------~~~~~~-~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1228 (1251)
+.+....+..+...++ |-+ ...... +. ....-++...+++.+++..||.+|.|+++.+
T Consensus 256 dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAl 335 (438)
T KOG0666|consen 256 DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQAL 335 (438)
T ss_pred HHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHh
Confidence 1111111111111100 000 000000 00 0000123367899999999999999999987
Q ss_pred HH
Q 000859 1229 DL 1230 (1251)
Q Consensus 1229 ~~ 1230 (1251)
+.
T Consensus 336 eh 337 (438)
T KOG0666|consen 336 EH 337 (438)
T ss_pred cc
Confidence 64
No 312
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.98 E-value=7.1e-32 Score=304.41 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=198.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
-|+..+.||+|+||.||+|.. .+++.||+|++.........+.+.+|++++++++||||+++++++... ...++|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--CeEEEEEE
Confidence 366778899999999999964 468899999986554444557888999999999999999999988653 45799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++..+
T Consensus 83 ~~~~~~l~~~i~~--------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06641 83 YLGGGSALDLLEP--------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL 151 (277)
T ss_pred eCCCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceec
Confidence 9999999999864 3578999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.... .......++..|+|||.+.+..++.++|+||+||++|||++|..||....... .....
T Consensus 152 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~--------- 213 (277)
T cd06641 152 TDTQ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-----VLFLI--------- 213 (277)
T ss_pred ccch----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-----HHHHH---------
Confidence 3211 11222467889999999988889999999999999999999999996542211 11100
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.....+.. ....+.++.+++.+||+.+|++||++++++..
T Consensus 214 ---~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 214 ---PKNNPPTL--EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---hcCCCCCC--CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00001111 12245668899999999999999999999984
No 313
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.98 E-value=8.7e-32 Score=301.58 Aligned_cols=252 Identities=29% Similarity=0.472 Sum_probs=203.6
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|++|.||+|... +++.||||++.........+.+.+|++++++++|+|++++++++... ...++|||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE--GEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--CeEEEEEE
Confidence 5788889999999999999655 58999999997665545567899999999999999999999988554 55799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+..
T Consensus 80 ~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~ 149 (264)
T cd06623 80 YMDGGSLADLLKKV-------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKV 149 (264)
T ss_pred ecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcccee
Confidence 99999999999763 568999999999999999999999 8 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
...... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||....... ..+...
T Consensus 150 ~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~---------- 213 (264)
T cd06623 150 LENTLD----QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS--FFELMQ---------- 213 (264)
T ss_pred cccCCC----cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC--HHHHHH----------
Confidence 533221 1123467899999999998899999999999999999999999997654211 001000
Q ss_pred hhhhcccCCCCCCchHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEEC-AAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...... .+. .... .+..+.+++.+|++.+|++||++.++++.
T Consensus 214 -~~~~~~-~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 214 -AICDGP-PPS--LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -HHhcCC-CCC--CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000100 011 1112 45678999999999999999999999874
No 314
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.98 E-value=3.3e-32 Score=309.88 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=194.5
Q ss_pred cCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 950 DEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 950 ~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
....||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.. ....++|+||++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv~e~~~ 101 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVLMEFLQ 101 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEEEecCC
Confidence 344799999999999954 4689999999865433 345678899999999999999999998865 345799999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 1108 (1251)
+++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..+...
T Consensus 102 ~~~L~~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~ 170 (297)
T cd06659 102 GGALTDIVSQ--------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 170 (297)
T ss_pred CCCHHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccc
Confidence 9999998754 3578999999999999999999999 9999999999999999999999999998754322
Q ss_pred cCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhh
Q 000859 1109 YNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL 1188 (1251)
Q Consensus 1109 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1251)
. .......|+..|+|||++.+..++.++|||||||++|||++|+.||......+. ..... . .
T Consensus 171 ~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~---~---~------ 232 (297)
T cd06659 171 V----PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--MKRLR---D---S------ 232 (297)
T ss_pred c----ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHh---c---c------
Confidence 1 112235688999999999988899999999999999999999999975422111 11000 0 0
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1189 DDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..+........+..+.+++.+|++.+|++||+++++++.
T Consensus 233 ---~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 233 ---PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000011111234568899999999999999999999884
No 315
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=6.7e-32 Score=306.87 Aligned_cols=264 Identities=19% Similarity=0.213 Sum_probs=185.2
Q ss_pred hcCCCcCceecccCCceEEEEEecC----CcEEEEEEeccCCchhhh----------HHHHHHHHHHHhccCCCccceec
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELAN----GATVAVKKISCKDDHLLN----------KSFTREVKTLGRIRHRHLVKLMG 1010 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~niv~l~g 1010 (1251)
..+|.+.+.||+|+||+||+|...+ +..+|+|+.......... .....+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578899999999999999997654 345677654332221111 11223344455668999999998
Q ss_pred eeeecCCC--ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee
Q 000859 1011 HCCNKGAG--SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL 1088 (1251)
Q Consensus 1011 ~~~~~~~~--~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill 1088 (1251)
++...... ..++++|+.. .++.+.++.. ...++..+..++.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-------KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhh-------ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 65443222 2367777764 3666666542 2357888899999999999999999 99999999999999
Q ss_pred cCCCCeEEcccccccccccccCCC---CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCcccc
Q 000859 1089 DSNMEAHLGDFGLAKALVEDYNSN---TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGV 1165 (1251)
Q Consensus 1089 ~~~~~~kl~DfG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~ 1165 (1251)
+.++.++|+|||+|+.+....... ........||+.|+|||+..+..++.++||||+||++|||++|+.||......
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 999999999999998764321111 11223357999999999999999999999999999999999999999766322
Q ss_pred chhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1166 EMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
........... ...... +... ...++..+.+++..|++.+|++||+++++.+.+
T Consensus 240 ~~~~~~~~~~~-------~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 240 GNLIHAAKCDF-------IKRLHE----GKIK-IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHHHHHhHHHH-------HHHhhh----hhhc-cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11111000000 000000 1000 112346788999999999999999999999876
No 316
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=1.4e-32 Score=309.72 Aligned_cols=255 Identities=26% Similarity=0.331 Sum_probs=205.6
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
...|.....||+|.|++|..|+ ..++..||||.+.+.. .....+.+.+|+++|+.++|||||+++.+... +...|+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t--~~~lyl 132 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET--EATLYL 132 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee--cceeEE
Confidence 4567888899999999999994 4579999999997554 33344668899999999999999999997743 456799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+.+|.+++|+.++ +...+.++..++.|+++|++|||++ .|||||+|++||+++.+..+||+|||++
T Consensus 133 V~eya~~ge~~~yl~~~-------gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS 202 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKH-------GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFS 202 (596)
T ss_pred EEEeccCchhHHHHHhc-------ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccc
Confidence 99999999999999885 4556688899999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccCCC-CCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKA-TEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
..+.. ......++|++.|.|||++.+..| ++++|+||+|+++|-++.|..||++..-.
T Consensus 203 ~~~~~-----~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---------------- 261 (596)
T KOG0586|consen 203 TFFDY-----GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---------------- 261 (596)
T ss_pred eeecc-----cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc----------------
Confidence 87642 222334689999999999998876 57899999999999999999999864221
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
+...+..+.++-.+.....++.+++++++-.+|.+|++.+++.+.-+....
T Consensus 262 ----~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 262 ----ELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred ----cccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 111111222222222234456689999999999999999999887655443
No 317
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.98 E-value=8.3e-32 Score=307.52 Aligned_cols=266 Identities=23% Similarity=0.307 Sum_probs=196.7
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch----hhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH----LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+..|++++++++|+||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEE
Confidence 367778999999999999965 46899999999754322 234567789999999999999999998865 45679
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+ +|+|.+++.... ..+++.++.+++.||++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 lv~e~~-~~~L~~~i~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~ 148 (298)
T cd07841 79 LVFEFM-ETDLEKVIKDKS------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGL 148 (298)
T ss_pred EEEccc-CCCHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEcccee
Confidence 999999 899999997631 3689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|.+||.+....+. ............
T Consensus 149 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (298)
T cd07841 149 ARSFGSPN----RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ-LGKIFEALGTPT 223 (298)
T ss_pred eeeccCCC----ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH-HHHHHHHcCCCc
Confidence 97654321 11122356788999998864 4578999999999999999999888865433211 111111100000
Q ss_pred chhhh------hhhcccCCCCCC---chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 GSARE------ELLDDQMKPLLP---GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ~~~~~------~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... ........+..+ .....+.++.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 224 EENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000 000000000000 01123567889999999999999999999997
No 318
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=4.9e-32 Score=307.16 Aligned_cols=267 Identities=22% Similarity=0.317 Sum_probs=195.2
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||.|+||.||+|+. .+++.||||++..... ....+.+.+|++++++++||||+++++++.. ....++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc--CCcEEEEe
Confidence 377788999999999999965 4689999999865432 2234578899999999999999999998854 44579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+. ++|.+++...+ ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|++|||.++.
T Consensus 79 e~~~-~~l~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~ 149 (284)
T cd07860 79 EFLH-QDLKKFMDASP-----LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARA 149 (284)
T ss_pred eccc-cCHHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhh
Confidence 9996 68999887643 45689999999999999999999999 999999999999999999999999999875
Q ss_pred cccccCCCCcccceeecccceecccccccCC-CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch-
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLK-ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS- 1182 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 1182 (1251)
..... .......++..|+|||.+.+.. ++.++|||||||++|||+||+.||......+ ......+........
T Consensus 150 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 224 (284)
T cd07860 150 FGVPV----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVV 224 (284)
T ss_pred cccCc----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhh
Confidence 43211 1112235688999999887644 5889999999999999999999997543221 111111111000000
Q ss_pred -----hhhhhhcccC---CCCC-CchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 -----AREELLDDQM---KPLL-PGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 -----~~~~~~~~~~---~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.......... .... ......+.++.+++.+|++.||++|||++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 225 WPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000 0000 000113456789999999999999999999985
No 319
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=4.8e-32 Score=314.31 Aligned_cols=272 Identities=24% Similarity=0.332 Sum_probs=200.7
Q ss_pred cCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecC--CCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG--AGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~~~ 1021 (1251)
.+|+..+.||+|+||.||+|. ..+|+.||+|++..... ....+.+.+|+.++++++||||+++++++.... ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 578888899999999999995 45699999999875432 234566778999999999999999999775432 34578
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+. |+|.+++.. ...+++..+.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||.
T Consensus 85 lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 85 VVMDLME-SDLHHIIHS-------DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred EEEehhh-hhHHHHhcc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccc
Confidence 9999995 689998865 34589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
++.................|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.+...... ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~--~~~~~~~~g~~ 231 (334)
T cd07855 154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ--LKLILSVLGSP 231 (334)
T ss_pred ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH--HHHHHHHhCCC
Confidence 97654332222222223478899999998765 4689999999999999999999999976533211 11111100000
Q ss_pred ---------chhhhhhhcccC-CCCCCc---hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1181 ---------GSAREELLDDQM-KPLLPG---EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1181 ---------~~~~~~~~~~~~-~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.....+..+... ....+. ....+.++.+++.+|++.||++||++++++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000001111000 001110 01235678999999999999999999998874
No 320
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=280.82 Aligned_cols=249 Identities=25% Similarity=0.346 Sum_probs=199.6
Q ss_pred ceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecC--CCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKG--AGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~--~~~~~lv~E~~ 1027 (1251)
++||-|-.|.|-.+ +.++++.+|+|++... ....+|++.--.. .|||||.++++|.... .....+|||.|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM 141 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence 37999999999999 5668999999998522 3456788876655 6999999999887543 34557899999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC---CCCeEEcccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS---NMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~ 1104 (1251)
+||.|.+.+.+++ ...+++.++..|..||+.|+.|||+. .|.||||||+|+|.+. +-.+|++|||+|+.
T Consensus 142 eGGeLfsriq~~g-----~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 142 EGGELFSRIQDRG-----DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred cchHHHHHHHHcc-----cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccc
Confidence 9999999998864 56799999999999999999999999 9999999999999964 55699999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..+. ......+-|+.|.|||++....|+..+|+||+||++|-|++|.+||-...+..+ +...+
T Consensus 214 t~~~-----~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai------------spgMk 276 (400)
T KOG0604|consen 214 TQEP-----GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------------SPGMK 276 (400)
T ss_pred cCCC-----ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC------------ChhHH
Confidence 4321 111224669999999999999999999999999999999999999976644322 11122
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
..+....+.-.-+.+.+.+.+..++|+.+++.+|.+|-|+.++++.=
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 22333333333345677888999999999999999999999998653
No 321
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.98 E-value=9.1e-32 Score=308.68 Aligned_cols=267 Identities=24% Similarity=0.319 Sum_probs=198.7
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
..+|+..+.||+|+||.||+|.. .+|+.||+|++...... .....+.+|++++++++|+||+++++++........++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 45788999999999999999965 56899999998654322 22345668999999999999999999887655556799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||++ ++|.+++... ...+++.++..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 86 v~e~~~-~~l~~~l~~~------~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~ 155 (309)
T cd07845 86 VMEYCE-QDLASLLDNM------PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLA 155 (309)
T ss_pred EEecCC-CCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcccee
Confidence 999996 5898888753 25689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+. ........+
T Consensus 156 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~-----~~~~~~~~~ 226 (309)
T cd07845 156 RTYGLPA----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ-----LDLIIQLLG 226 (309)
T ss_pred eecCCcc----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHHhcC
Confidence 7654321 11122345788999998865 4578999999999999999999999976533211 111111000
Q ss_pred hhhhhhhc---------cc-CC-CCCCc----hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLD---------DQ-MK-PLLPG----EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~---------~~-~~-~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
........ .. .. ..... ....++++.+++.+|++.||++|||++|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 227 TPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred CCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000 00 00 00000 01135667899999999999999999999863
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=5.4e-32 Score=302.05 Aligned_cols=248 Identities=22% Similarity=0.287 Sum_probs=198.0
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+|+..+.||.|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++.+.. +...++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD--EENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC--CCeEEEE
Confidence 4778889999999999999654 68999999996433 22345788999999999999999999987743 4567999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
+||+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++|+|||.+.
T Consensus 79 ~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~ 148 (258)
T cd05578 79 VDLLLGGDLRYHLSQK-------VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIAT 148 (258)
T ss_pred EeCCCCCCHHHHHHhc-------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccccc
Confidence 9999999999999763 4688999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... ......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||....... ..+......
T Consensus 149 ~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~----- 215 (258)
T cd05578 149 KVTPDT-----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI---RDQIRAKQE----- 215 (258)
T ss_pred ccCCCc-----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH---HHHHHHHhc-----
Confidence 653221 1223467889999999988889999999999999999999999997654321 111110000
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH--HHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS--RQVC 1228 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~eil 1228 (1251)
. .....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 216 ------~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 216 ------T---ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ------c---ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0 0111122245678899999999999999999 5554
No 323
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.98 E-value=1.4e-31 Score=303.00 Aligned_cols=248 Identities=22% Similarity=0.373 Sum_probs=196.2
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.|...+.||+|++|.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. ....++++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEEEe
Confidence 355567899999999999964 578999999986433 3345668899999999999999999998754 345799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||+|+||+++.++.++++|||.+...
T Consensus 97 ~~~~~~L~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 97 FLEGGALTDIVTH--------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred ccCCCCHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 9999999999875 3478999999999999999999999 9999999999999999999999999988654
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
..... ......|+..|+|||...+..++.++||||+||++|||++|+.||....+.+ .......
T Consensus 166 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-----~~~~~~~------- 229 (285)
T cd06648 166 SKEVP----RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-----AMKRIRD------- 229 (285)
T ss_pred ccCCc----ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-----HHHHHHh-------
Confidence 32211 1122468899999999988889999999999999999999999986542211 1111100
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
...+........+..+.+++.+||+.+|++||+++++++
T Consensus 230 -----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 230 -----NLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -----cCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 000111111124467899999999999999999999986
No 324
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.98 E-value=7.5e-32 Score=306.02 Aligned_cols=268 Identities=24% Similarity=0.297 Sum_probs=198.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|.. .+|+.||||++..... ....+.+.+|+.++++++||||+++++++.. +...++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEEe
Confidence 477788999999999999965 4689999999875542 3345678999999999999999999998865 45579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+ +++|.+++... ...+++.+++.++.|+++|++|||+. +++|+||||+||+++.++.++++|||.+..
T Consensus 79 e~~-~~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~ 148 (286)
T cd07832 79 EYM-PSDLSEVLRDE------ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARL 148 (286)
T ss_pred ccc-CCCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeeccc
Confidence 999 99999998764 25689999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... .......|+..|+|||.+.+. .++.++||||+||++|||++|++||.+....+. ...............
T Consensus 149 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 224 (286)
T cd07832 149 FSEEEP---RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ-LAIVFRTLGTPNEET 224 (286)
T ss_pred ccCCCC---CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH-HHHHHHHcCCCChHH
Confidence 543211 112234688999999988654 468999999999999999999888865433211 111111000000000
Q ss_pred hh------hhhcccCCCCCC-----chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 RE------ELLDDQMKPLLP-----GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~------~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. .+.......... .....+.++.+++.+|++.||++|||+++++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 225 WPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000000000 001234678999999999999999999999864
No 325
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.98 E-value=1.7e-31 Score=302.89 Aligned_cols=252 Identities=26% Similarity=0.404 Sum_probs=202.0
Q ss_pred hhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
.++.|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++.++|+||+++++++... ...++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVG--DELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--CEEEE
Confidence 4566778889999999999999665 689999999965443 456788999999999999999999988654 55799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+||+++++|.+++.... ..+++.++..++.|++.|++|||+. +|+|+|++|+||+++.++.++|+|||.+
T Consensus 93 v~e~~~~~~L~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~ 163 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFA 163 (286)
T ss_pred EEeccCCCcHHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchh
Confidence 999999999999998742 3789999999999999999999998 9999999999999999999999999988
Q ss_pred cccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
....... .......++..|+|||.+.+..++.++|+|||||++|||++|+.||....+... .. .
T Consensus 164 ~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-~~----~------- 227 (286)
T cd06614 164 AQLTKEK----SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-LF----L------- 227 (286)
T ss_pred hhhccch----hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-HH----H-------
Confidence 6543221 111224578899999999888899999999999999999999999865422111 00 0
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.... ..+..+.....+..+.+++.+|++.+|.+||++.+++.
T Consensus 228 ----~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 228 ----ITTK-GIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ----HHhc-CCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0000 01112222234567899999999999999999999975
No 326
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=8.5e-32 Score=306.56 Aligned_cols=268 Identities=21% Similarity=0.287 Sum_probs=198.3
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|++++++++||||+++++++........++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35788889999999999999664 6889999999654322 223456789999999999999999998876655678999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||++ ++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 85 ~e~~~-~~L~~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~ 154 (293)
T cd07843 85 MEYVE-HDLKSLMETMK------QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAR 154 (293)
T ss_pred ehhcC-cCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCcee
Confidence 99997 59999987642 3689999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.+.... .......++..|+|||.+.+. .++.++|+||+|+++|||++|+.||......+. ..............
T Consensus 155 ~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~ 229 (293)
T cd07843 155 EYGSPL----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPTEK 229 (293)
T ss_pred eccCCc----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchH
Confidence 654321 112224578899999988754 468999999999999999999999975533211 11111000000000
Q ss_pred hhh----------h----hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1183 ARE----------E----LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1183 ~~~----------~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... . .........++.. ..+..+.+++.+|++.||++|||++|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 230 IWPGFSELPGAKKKTFTKYPYNQLRKKFPAL-SLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHhhccchhcccccccccchhhhcccccc-CCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 0 0000000111110 02556889999999999999999999975
No 327
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=1.8e-31 Score=305.80 Aligned_cols=248 Identities=29% Similarity=0.392 Sum_probs=194.6
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
..|...+.||+|+||+||+|.. .+++.||+|++.... .....+.+.+|+++++.++||||++++++|... ...++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~l 92 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--HTAWL 92 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC--CeEEE
Confidence 4477888999999999999965 468999999986432 233446788999999999999999999988654 44689
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|+||++ |++.+++... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++
T Consensus 93 v~e~~~-g~l~~~~~~~------~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~ 162 (307)
T cd06607 93 VMEYCL-GSASDILEVH------KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSA 162 (307)
T ss_pred EHHhhC-CCHHHHHHHc------ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcc
Confidence 999997 6787877543 24589999999999999999999999 9999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
...... ....++..|+|||++. ...++.++||||||+++|||++|+.||........ ...
T Consensus 163 ~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-----~~~---- 225 (307)
T cd06607 163 SLVSPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYH---- 225 (307)
T ss_pred eecCCC--------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-----HHH----
Confidence 653211 2246788999999874 45688999999999999999999999865422111 000
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
... ...+.. .....+..+.+++.+||+.||++||++++++..-
T Consensus 226 -------~~~-~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 226 -------IAQ-NDSPTL-SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred -------Hhc-CCCCCC-CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 000 000111 1223556789999999999999999999998753
No 328
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.5e-33 Score=284.44 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=204.0
Q ss_pred hhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCce
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 1020 (1251)
..++|+..++||+|.||+|-.+ ...+++.+|+|++++.. ...+.+.-..|-++++..+||.+..+--.|. .....
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ--t~drl 243 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ--TQDRL 243 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc--cCceE
Confidence 4566888999999999999999 46689999999997553 2233455567999999999999998875553 34567
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFG 1100 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 1100 (1251)
++||||+.||.|.-+|.+ .+.++++..+-+...|+.|+.|||++ +||.||+|.+|.|+|.+|.+||+|||
T Consensus 244 CFVMeyanGGeLf~HLsr-------er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFG 313 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSR-------ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFG 313 (516)
T ss_pred EEEEEEccCceEeeehhh-------hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecc
Confidence 999999999999988876 46788888888999999999999999 99999999999999999999999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+++.-. ........++||+.|.|||++....|+.++|.|.+||++|||++|+.||........--..
T Consensus 314 LCKE~I----~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI--------- 380 (516)
T KOG0690|consen 314 LCKEEI----KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI--------- 380 (516)
T ss_pred cchhcc----cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH---------
Confidence 996532 2223334589999999999999999999999999999999999999999754332211100
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHhhcCCCccccc
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP--SSRQVCDLLLNVFNNRIVDFD 1243 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~eil~~L~~~~~~~~~~~~ 1243 (1251)
.. ..+..+....++...++...+.+||.+|. ..+++.++.+.-+...+.+++
T Consensus 381 -------l~----ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 381 -------LM----EDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred -------Hh----hhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 00 01111222445677899999999999994 344555555444444454444
No 329
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.4e-31 Score=312.74 Aligned_cols=268 Identities=24% Similarity=0.303 Sum_probs=198.1
Q ss_pred hhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---- 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---- 1017 (1251)
...+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 356799999999999999999954 578999999986432 33344567789999999999999999998764322
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++||||++ ++|.+++.. .++...+..++.|++.|++|||+. +|+||||||+||+++.++.+||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~---------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM---------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 24689999996 588888754 278889999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
|||.++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||........ .........
T Consensus 161 Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 234 (353)
T cd07850 161 DFGLARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKIIEQLG 234 (353)
T ss_pred cCccceeCCCCC-----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcC
Confidence 999997653221 11224678899999999999999999999999999999999999975532111 101000000
Q ss_pred hc-------cchhhh---------------hhhcccCCCCCC--chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1178 EM-------SGSARE---------------ELLDDQMKPLLP--GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~-------~~~~~~---------------~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. ...... +.......+... .....+..+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 235 TPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 000000 000000000000 011245668899999999999999999999864
No 330
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=8.8e-32 Score=300.23 Aligned_cols=251 Identities=26% Similarity=0.388 Sum_probs=196.7
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|.. .+|..||+|.+.... .....+.+.+|++++++++|+||+++++.+.. ....++|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE--NGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc--CCeEEEEE
Confidence 467788999999999999965 468899999986532 12344677899999999999999999998754 34579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC-eEEccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME-AHLGDFGLAK 1103 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~DfG~a~ 1103 (1251)
||+++++|.+++.+.. ...+++..+..++.|+++|++|||+. +++|+||||+||++++++. +|++|||.+.
T Consensus 79 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (257)
T cd08225 79 EYCDGGDLMKRINRQR-----GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIAR 150 (257)
T ss_pred ecCCCCcHHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccch
Confidence 9999999999997642 33579999999999999999999999 9999999999999998864 6999999987
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
....... ......|++.|+|||+..+..++.++|+|||||++||+++|+.||..... .++....
T Consensus 151 ~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~------- 214 (257)
T cd08225 151 QLNDSME----LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVLKI------- 214 (257)
T ss_pred hccCCcc----cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHH-------
Confidence 6532211 11224578999999999888899999999999999999999999865421 1111111
Q ss_pred hhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1184 REELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
......+. ....+.++.+++.+|++.+|++|||+.|+++.
T Consensus 215 ----~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 215 ----CQGYFAPI---SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ----hcccCCCC---CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11111111 11234568899999999999999999999863
No 331
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=1.1e-31 Score=304.85 Aligned_cols=266 Identities=25% Similarity=0.350 Sum_probs=198.2
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++|+||+++++++.. ....++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEEE
Confidence 5788889999999999999654 68899999986543 23345788999999999999999999998865 44579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++++.+..+... ...+++.++..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.+..
T Consensus 80 e~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 80 EYVERTLLELLEAS-------PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred ecCCCCHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 99998766665543 34589999999999999999999999 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA 1183 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1251)
...... .......++..|+|||++.+. .++.++||||+|+++|||++|+.||.+....+. ..............
T Consensus 150 ~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~ 224 (288)
T cd07833 150 LRARPA---SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ--LYLIQKCLGPLPPS 224 (288)
T ss_pred cCCCcc---ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHH
Confidence 543321 122234678899999999887 889999999999999999999999975533211 11111100000000
Q ss_pred hhhhh--cccCC-----CCC-C------chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 REELL--DDQMK-----PLL-P------GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~~~~~--~~~~~-----~~~-~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... +..+. ... + .+...+.++.+++.+||+.+|++||+++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 225 HQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 00000 000 0 01113577899999999999999999999875
No 332
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1.1e-31 Score=311.83 Aligned_cols=273 Identities=25% Similarity=0.301 Sum_probs=200.4
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccC-CchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCcee
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCK-DDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
..+|+..+.||+|+||.||+|... +++.||||++... ......+.+.+|+.+++++ +||||+++++++........+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 346777889999999999999654 6889999988543 2223445677899999999 999999999988765555679
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 86 lv~e~~~-~~L~~~~~~--------~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~ 153 (337)
T cd07852 86 LVFEYME-TDLHAVIRA--------NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGL 153 (337)
T ss_pred EEecccc-cCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 9999997 599998865 2578889999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCC-Ccccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1102 AKALVEDYNSN-TESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1102 a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
++......... ........|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+. ...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~ 232 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPP 232 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCC
Confidence 98664332211 112233568999999998754 4578899999999999999999999975533221 11111110000
Q ss_pred cc--------hhhhhhhcccCCCC----CCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1180 SG--------SAREELLDDQMKPL----LPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1180 ~~--------~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. .......+...... .......+.++.+++.+||+.||++|||++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 00011111000000 00011145678999999999999999999999975
No 333
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=7.3e-32 Score=306.34 Aligned_cols=256 Identities=29% Similarity=0.385 Sum_probs=191.8
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|...+.||+|+||.||++.. .+++.||+|++...........+.+|+.++.++. ||||+++++++.. +...+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~--~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR--EGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--CCcEEEEE
Confidence 345566899999999999954 4689999999976554455678889999999996 9999999998765 34568999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+.. ++.++..... ......+++..+.+++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 83 e~~~~-~l~~l~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 83 ELMDI-SLDKFYKYVY--EVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred ecccC-CHHHHHHHHH--HhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 99864 5555432110 011356899999999999999999999731 899999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccC---CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSL---KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+.... ......|+..|+|||.+.+. .++.++||||+||++|||++|+.||..... .. +....
T Consensus 158 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~---~~~~~--- 222 (288)
T cd06616 158 LVDSI-----AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VF---DQLTQ--- 222 (288)
T ss_pred hccCC-----ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HH---HHHhh---
Confidence 53221 11223578899999998766 689999999999999999999999965421 00 00000
Q ss_pred hhhhhhhcccCCCCCC--chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLP--GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.... ..+..+ .....+.++.+++.+||+.||++|||+++|++.
T Consensus 223 -----~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 223 -----VVKG-DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -----hcCC-CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 001111 112355678999999999999999999999875
No 334
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=296.07 Aligned_cols=252 Identities=23% Similarity=0.284 Sum_probs=198.7
Q ss_pred HhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
...+.|+.-++||+|+||.||-++. .+|+.+|.|++.++. ..........|-.|++++..+.||.+--+| +..+.
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--eTkd~ 259 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--ETKDA 259 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee--cCCCc
Confidence 3457788889999999999999954 479999999986544 222335567899999999999999986555 44556
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++|+..|.||+|.-++-... ...+++..++-+|.+|+.||++||++ +||.||+||+|||+|+.|+|+|+|+
T Consensus 260 LClVLtlMNGGDLkfHiyn~g-----~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHG-----NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred eEEEEEeecCCceeEEeeccC-----CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 899999999999988886643 35799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
|+|..+.+ ..+....+||.+|||||++....|+...|.||+||++|||+.|+.||...... .+|.+....
T Consensus 332 GLAvei~~-----g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK----vk~eEvdrr- 401 (591)
T KOG0986|consen 332 GLAVEIPE-----GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK----VKREEVDRR- 401 (591)
T ss_pred ceEEecCC-----CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh----hhHHHHHHH-
Confidence 99987643 33344468999999999999999999999999999999999999999643111 111111100
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
.. ......++..+++..++.+..+++||++|--.+
T Consensus 402 -------~~----~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 402 -------TL----EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred -------Hh----cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 00 011112244566788999999999999996544
No 335
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=2.1e-31 Score=306.19 Aligned_cols=270 Identities=24% Similarity=0.333 Sum_probs=196.0
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCC-----
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA----- 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----- 1017 (1251)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34688899999999999999965 4689999999864432 2223456789999999999999999998765432
Q ss_pred -CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEE
Q 000859 1018 -GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHL 1096 (1251)
Q Consensus 1018 -~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 1096 (1251)
...++||||+. +++.+++... ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNK------NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhc------ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 24589999996 5888888653 24689999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
+|||.+..+...............++..|+|||.+.+. .++.++||||||+++|||++|+.||....... .......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~--~~~~~~~ 238 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH--QLTLISQ 238 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH
Confidence 99999976543322211222234678899999987654 47889999999999999999999997543221 1111111
Q ss_pred HHhccchhhhhh---------hcccCCCC-----CC---chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1176 HMEMSGSAREEL---------LDDQMKPL-----LP---GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1176 ~~~~~~~~~~~~---------~~~~~~~~-----~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. +...... .+....+. .+ ........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 239 LC---GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred Hh---CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 10 0000000 00000000 00 00012345679999999999999999999985
No 336
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=2.1e-31 Score=301.96 Aligned_cols=268 Identities=22% Similarity=0.362 Sum_probs=198.3
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|++|.||+|+.. +|+.||||++.........+.+.+|++++++++||||+++++++... ...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE--NKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcEEEEEe
Confidence 4778889999999999999664 68999999997665444456778899999999999999999988654 45699999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++ +|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||.++..
T Consensus 79 ~~~~-~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~ 150 (284)
T cd07836 79 YMDK-DLKKYMDTHGV----RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAF 150 (284)
T ss_pred cCCc-cHHHHHHhcCC----CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence 9984 89998865421 34689999999999999999999999 9999999999999999999999999999754
Q ss_pred ccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... .......++..|+|||.+.+. .++.++||||+||++||+++|+.||.+....+. .....+..........
T Consensus 151 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 225 (284)
T cd07836 151 GIPV----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPTESTW 225 (284)
T ss_pred cCCc----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhH
Confidence 3221 111223568899999987654 578899999999999999999999976543221 1111111100000000
Q ss_pred hhhhc-ccCCCCCC---------chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLD-DQMKPLLP---------GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~-~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
+.+.. .......+ .....+..+.+++.+|++.||.+||+++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 226 PGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00000000 01123567889999999999999999999875
No 337
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.7e-31 Score=301.28 Aligned_cols=245 Identities=23% Similarity=0.290 Sum_probs=189.5
Q ss_pred ecccCCceEEEEE-ecCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAE-LANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||+|+||+||+|. ..+|+.||+|.+.... .....+.+..|+++++.++||||+++++++.. ....++||||++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET--KDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec--CCeEEEEEecCCCC
Confidence 6899999999995 4568999999986432 22234566789999999999999999988754 34579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++.... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.++.....
T Consensus 79 ~L~~~l~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-- 148 (277)
T cd05577 79 DLKYHIYNVG-----EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-- 148 (277)
T ss_pred cHHHHHHHcC-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--
Confidence 9999997642 24689999999999999999999999 9999999999999999999999999998764321
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......++..|+|||++.+..++.++||||+||++|+|++|+.||........ ...... ....
T Consensus 149 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~-----------~~~~- 212 (277)
T cd05577 149 ---KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKR-----------RTLE- 212 (277)
T ss_pred ---CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHh-----------cccc-
Confidence 111224578899999999888899999999999999999999999975432111 000000 0000
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCD 1229 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1229 (1251)
.....+...++.+.+++.+||+.||++|| ++++++.
T Consensus 213 ---~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 213 ---MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ---ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 01111122356788999999999999999 5555654
No 338
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=2e-31 Score=298.21 Aligned_cols=243 Identities=26% Similarity=0.362 Sum_probs=192.9
Q ss_pred ecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||.|+||.||+|... +++.||+|++.... .....+.+.+|+++++.++||||+++++++... ...++|+||++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--KYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--CccEEEEecCCCC
Confidence 699999999999654 58999999986543 223457789999999999999999999987543 4579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++.+. ..+++..+..++.|+++|++|+|+. +++|+||+|+||+++.++.++|+|||.++......
T Consensus 79 ~L~~~l~~~-------~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~- 147 (262)
T cd05572 79 ELWTILRDR-------GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ- 147 (262)
T ss_pred cHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-
Confidence 999999763 3588999999999999999999998 99999999999999999999999999997653321
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||........ .... .....
T Consensus 148 ----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~-----------~~~~~ 209 (262)
T cd05572 148 ----KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM---EIYN-----------DILKG 209 (262)
T ss_pred ----ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH---HHHH-----------HHhcc
Confidence 11224678899999999888899999999999999999999999976542111 1111 11110
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCD 1229 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~ 1229 (1251)
...... +...+.++.+++.+||+.+|++||+ ++|+++
T Consensus 210 ~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 210 NGKLEF--PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCCC--CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 111111 1222567999999999999999999 777665
No 339
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=4.1e-31 Score=304.07 Aligned_cols=253 Identities=29% Similarity=0.398 Sum_probs=197.0
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|...+.||+|+||.||+|.. .++..||+|++.... .....+.+.+|++++++++|||++++++++... ...++||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 104 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE--HTAWLVM 104 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC--CeEEEEE
Confidence 56677899999999999965 468899999986432 223445788999999999999999999988654 4468999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++ |++.+++... ...+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++..
T Consensus 105 e~~~-g~l~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~ 174 (317)
T cd06635 105 EYCL-GSASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASI 174 (317)
T ss_pred eCCC-CCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccc
Confidence 9997 5888877543 34589999999999999999999999 999999999999999999999999998865
Q ss_pred cccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
... .....|+..|+|||++. ...++.++|||||||++|||++|+.||........ ..
T Consensus 175 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~------- 234 (317)
T cd06635 175 ASP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LY------- 234 (317)
T ss_pred cCC--------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-----HH-------
Confidence 321 11246788999999874 45688999999999999999999999865422111 00
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCC
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNR 1238 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~ 1238 (1251)
....... +. ......+..+.+++.+||+.+|.+||+++++++....+....
T Consensus 235 ----~~~~~~~-~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 235 ----HIAQNES-PT-LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ----HHHhccC-CC-CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 0000000 11 112234567899999999999999999999998776655444
No 340
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=2.1e-31 Score=301.83 Aligned_cols=266 Identities=23% Similarity=0.320 Sum_probs=194.7
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|+..+.||.|++|.||+|.. .+|+.||+|++...... ...+.+.+|++++++++|||++++++++... ...+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~--~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE--NKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--CeEEEEEe
Confidence 56678999999999999964 47999999998654322 2335688899999999999999999988643 56799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|++ ++|.+++...+ ...+++..+.+++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.++..
T Consensus 79 ~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~ 149 (283)
T cd07835 79 FLD-LDLKKYMDSSP-----LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAF 149 (283)
T ss_pred ccC-cCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence 995 69999987643 24689999999999999999999999 9999999999999999999999999998754
Q ss_pred ccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchh-
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSA- 1183 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 1183 (1251)
.... .......++..|+|||++.+. .++.++||||+|+++|||++|+.||......+. .....+.........
T Consensus 150 ~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 224 (283)
T cd07835 150 GVPV----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGTPDEDVW 224 (283)
T ss_pred CCCc----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHh
Confidence 3211 111223568899999987654 578899999999999999999999975432211 111111100000000
Q ss_pred -----hhhhhcccCC----CCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 -----REELLDDQMK----PLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 -----~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.......... .........+.++.+++.+|++.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 225 PGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000 000001113356889999999999999999999985
No 341
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2.1e-31 Score=300.38 Aligned_cols=243 Identities=21% Similarity=0.247 Sum_probs=184.4
Q ss_pred eecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHh---ccCCCccceeceeeecCCCceeEEEee
Q 000859 953 IIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGR---IRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~---l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
.||+|+||.||++.. .+++.||+|.+..... ....+.+.+|..+++. .+||+|+.+++++... ...++||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEEEEEec
Confidence 489999999999965 4689999999864432 1222334455544443 3799999999887543 457899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++|+|.+++.. .+.+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++....
T Consensus 79 ~~~~~L~~~i~~-------~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~ 148 (279)
T cd05633 79 MNGGDLHYHLSQ-------HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 148 (279)
T ss_pred CCCCCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence 999999999876 34689999999999999999999999 99999999999999999999999999986542
Q ss_pred cccCCCCcccceeecccceecccccc-cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAY-SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.. ......|+..|+|||... +..++.++||||+||++|||++|..||.......... ......
T Consensus 149 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~------- 212 (279)
T cd05633 149 KK------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---IDRMTL------- 212 (279)
T ss_pred cc------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH---HHHHhh-------
Confidence 21 112246899999999886 4568999999999999999999999997543321111 000000
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCDL 1230 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~ 1230 (1251)
.. ....+...+.++.+++.+|++.||++|| |++|+++.
T Consensus 213 -----~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 213 -----TV--NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -----cC--CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00 0111223456788999999999999999 59888775
No 342
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=3.3e-31 Score=305.01 Aligned_cols=266 Identities=19% Similarity=0.219 Sum_probs=190.0
Q ss_pred ecccCCceEEEEEecCCcEEEEEEeccC-CchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCCh
Q 000859 954 IGSGGSGTVYKAELANGATVAVKKISCK-DDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSV 1032 (1251)
Q Consensus 954 lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL 1032 (1251)
+|.|+++.||++.. +++.||||++... ......+.+.+|+++++.++||||+++++++... ...+++|||+++|++
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l 86 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--SELYVVSPLMAYGSC 86 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--CeEEEEEeccCCCCH
Confidence 44445555555544 6899999999765 3444567899999999999999999999988654 456999999999999
Q ss_pred HHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCC-
Q 000859 1033 WDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNS- 1111 (1251)
Q Consensus 1033 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~- 1111 (1251)
.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|++|||.+..+......
T Consensus 87 ~~~l~~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 87 EDLLKTHF-----PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred HHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence 99998642 34578899999999999999999999 9999999999999999999999999998765432111
Q ss_pred --CCcccceeecccceeccccccc--CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1112 --NTESNTWFAGSYGYIAPEYAYS--LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1112 --~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||............................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhh
Confidence 1111123457788999999875 358899999999999999999999997653322111100000000000000000
Q ss_pred h------------c--ccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1188 L------------D--DQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1188 ~------------~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
. + ...............++.+++.+||+.||++|||++++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 0 00000111122345678899999999999999999999874
No 343
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=5.2e-31 Score=293.00 Aligned_cols=249 Identities=29% Similarity=0.424 Sum_probs=200.7
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
+|+..+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++++++++||+++++++++... ...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEEEEe
Confidence 3677889999999999999664 689999999965443 3557889999999999999999999987654 45799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+...
T Consensus 78 ~~~~~~L~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 148 (253)
T cd05122 78 FCSGGSLKDLLKSTN------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148 (253)
T ss_pred cCCCCcHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccc
Confidence 999999999987642 5689999999999999999999998 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
..... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ......
T Consensus 149 ~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~-------- 210 (253)
T cd05122 149 SDTKA-----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK-----ALFKIA-------- 210 (253)
T ss_pred ccccc-----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHH--------
Confidence 43211 233568899999999988889999999999999999999999987542111 000000
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
....+..+.....+..+.+++.+|++.||++|||++|+++
T Consensus 211 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 211 ----TNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ----hcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111111122223567899999999999999999999875
No 344
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=6.4e-31 Score=303.05 Aligned_cols=276 Identities=22% Similarity=0.312 Sum_probs=198.7
Q ss_pred CCCcCceecccCCceEEEEEec---CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA---NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
+|+..++||+|+||.||+|... +++.||+|.+.... .....+.+.+|++++++++||||+++++++........+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999654 47899999997532 122346678899999999999999999999776556789
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC----CCCeEEc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS----NMEAHLG 1097 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~ 1097 (1251)
+||||+++ ++.+++..... .....+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQ--AKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred EEEeCCCc-CHHHHHHhhcc--CCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEEC
Confidence 99999974 78777754321 1124688999999999999999999999 9999999999999999 9999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccc--------hh
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVE--------MD 1168 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~--------~~ 1168 (1251)
|||+++........ ........++..|+|||.+.+. .++.++|||||||++|||++|+.||.+..... ..
T Consensus 155 Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 155 DLGLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 99999765432211 1122235678999999987764 57899999999999999999999997554322 01
Q ss_pred HHHHHHHHHhccchh---------hhhhhcccCCCCCC---chH------HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1169 MVRWVEMHMEMSGSA---------REELLDDQMKPLLP---GEE------CAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1169 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~~~------~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
....++......... .....+.......+ ... ..+.++.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111111100000000 00000000001111 000 23356889999999999999999999975
No 345
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=1.9e-31 Score=298.88 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=195.8
Q ss_pred ecccCCceEEEEEec-CCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAELA-NGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||+|+||.||+|... +|+.||+|++..... ....+.+.+|++++++++||||+++++.+.. ....++++||++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEecCCCC
Confidence 689999999999765 589999999864432 2345678899999999999999999987754 45579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++++. +.+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 79 ~L~~~l~~~-------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 148 (265)
T cd05579 79 DLASLLENV-------GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQ 148 (265)
T ss_pred cHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcc
Confidence 999999763 3689999999999999999999999 999999999999999999999999999875432211
Q ss_pred CC----CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1111 SN----TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1111 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
.. ........++..|+|||......++.++||||+|+++||+++|+.||......+ ......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~--------- 214 (265)
T cd05579 149 INLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-----IFQNIL--------- 214 (265)
T ss_pred cccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHh---------
Confidence 00 112223467889999999988889999999999999999999999997553211 111000
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
... ...+.....+..+.+++.+||+.+|++|||++++.+.++.-+
T Consensus 215 --~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~ 259 (265)
T cd05579 215 --NGK--IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259 (265)
T ss_pred --cCC--cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCcc
Confidence 000 011111112567889999999999999999977776665443
No 346
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=3.9e-31 Score=301.51 Aligned_cols=268 Identities=21% Similarity=0.277 Sum_probs=194.9
Q ss_pred CCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhc-cCCCccceeceeeecCC---Cce
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGA---GSN 1020 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~---~~~ 1020 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+++++++ +||||+++++++..... ...
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 588889999999999999965 46899999998654322 2335778899999999 46999999998765432 236
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCeEEccc
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEAHLGDF 1099 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Df 1099 (1251)
++||||+++ ++.+++..... .....+++..++.++.||++|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGR--GPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 899999985 89998865421 1134689999999999999999999999 9999999999999998 899999999
Q ss_pred ccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|.++.+..... ......+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. .......
T Consensus 156 g~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~ 227 (295)
T cd07837 156 GLGRAFSIPVK----SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ----LLHIFKL 227 (295)
T ss_pred ccceecCCCcc----ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHHH
Confidence 99876532211 1122356788999998765 4578999999999999999999999976433221 1111000
Q ss_pred ccchhhhhhhcc-------cCCCCCC------chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1179 MSGSAREELLDD-------QMKPLLP------GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1179 ~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
. .......... ...+... .....+.++.+++.+||+.||.+||+++|++.
T Consensus 228 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 228 L-GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred h-CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 0000000000 0000000 00124567889999999999999999999875
No 347
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-32 Score=290.50 Aligned_cols=262 Identities=24% Similarity=0.354 Sum_probs=202.6
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCc------hhhhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDD------HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
..+|-..++||+|+|+.||+| +....+.||||+-....+ +...+...+|..|-+.++||.||++|+|+..+.
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt- 540 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT- 540 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc-
Confidence 445666778999999999999 677788999998643321 122345778999999999999999999998764
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec---CCCCe
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD---SNMEA 1094 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~ 1094 (1251)
..++-|+||++|.+|.-||+. .+.+++.+++.|++||+.|+.||.+. .++|||-|+||.|||+- .-|.+
T Consensus 541 dsFCTVLEYceGNDLDFYLKQ-------hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeI 612 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQ-------HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEI 612 (775)
T ss_pred ccceeeeeecCCCchhHHHHh-------hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCccccee
Confidence 457899999999999999987 46789999999999999999999996 66999999999999994 56889
Q ss_pred EEcccccccccccccCCC---Ccccceeecccceeccccccc----CCCCCccceeehhHHHHHHhhCCCCCCCccccch
Q 000859 1095 HLGDFGLAKALVEDYNSN---TESNTWFAGSYGYIAPEYAYS----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEM 1167 (1251)
Q Consensus 1095 kl~DfG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~ 1167 (1251)
||+|||+++.+..+.+.. ..-....+||+.|.+||.+.- ...+.++||||+||++|+++.|+.||+.......
T Consensus 613 KITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd 692 (775)
T KOG1151|consen 613 KITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD 692 (775)
T ss_pred EeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH
Confidence 999999999886654432 223345789999999998753 3468899999999999999999999975432221
Q ss_pred hHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1168 DMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
-+ +... ++. ...-.+|.......+...+|++|+++.-++|.++.++..
T Consensus 693 IL----qeNT---------Ilk-AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 693 IL----QENT---------ILK-ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HH----hhhc---------hhc-ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11 1110 000 111123333345567789999999999999999888753
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=3.4e-31 Score=301.93 Aligned_cols=253 Identities=27% Similarity=0.403 Sum_probs=193.3
Q ss_pred cCCCcCceecccCCceEEEEEecC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|+..+.||+|+||.||+|...+ ++.||||.+.........+.+.+|+.++.+. .||||+++++++... ...++|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD--SDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC--CeEEEE
Confidence 457888899999999999997754 8999999997554444456677788877777 499999999988654 457999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
|||+. +++.++.... ...+++..+.+++.|++.||+|||+ . +|+||||+|+||++++++.+||+|||.+
T Consensus 93 ~e~~~-~~l~~l~~~~------~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~ 162 (296)
T cd06618 93 MELMS-TCLDKLLKRI------QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGIS 162 (296)
T ss_pred eeccC-cCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccc
Confidence 99985 5777776553 2468999999999999999999997 5 8999999999999999999999999998
Q ss_pred cccccccCCCCcccceeecccceecccccccCC----CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK----ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
..+.... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||...........
T Consensus 163 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-------- 229 (296)
T cd06618 163 GRLVDSK-----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT-------- 229 (296)
T ss_pred hhccCCC-----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH--------
Confidence 7653221 112235778999999987553 78899999999999999999999964321110000
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
...... .+..+.....+.++.+++.+||+.||++||+++++++.-
T Consensus 230 -------~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 230 -------KILQEE-PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -------HHhcCC-CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 001110 011111122456789999999999999999999998764
No 349
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=2.5e-31 Score=308.47 Aligned_cols=278 Identities=22% Similarity=0.263 Sum_probs=202.3
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC---Cc
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---GS 1019 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---~~ 1019 (1251)
.++|...+.||+|+||+||+|. ..+++.||||.+.... .......+.+|+.+++.++||||+++++++..... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 4578889999999999999995 4578999999986432 22234567789999999999999999998764322 23
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++|+||+. ++|.+++.. .+.+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 152 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS-------SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDF 152 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcC
Confidence 689999996 689998875 35689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH-
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM- 1177 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~- 1177 (1251)
|+++...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.+....+. .........
T Consensus 153 g~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 227 (337)
T cd07858 153 GLARTTSEKG----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ-LKLITELLGS 227 (337)
T ss_pred ccccccCCCc----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH-HHHHHHHhCC
Confidence 9997653221 11223467889999998764 4688999999999999999999999975432111 000000000
Q ss_pred -------hccchhhhhhhcccCCCC-C---CchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhcCCC
Q 000859 1178 -------EMSGSAREELLDDQMKPL-L---PGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL--LLNVFNNR 1238 (1251)
Q Consensus 1178 -------~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~~~~~~ 1238 (1251)
.................. . ......+.++.+++.+|++.||++|||++++++. +..+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 228 PSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred CChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 000000000110000000 0 0011245678899999999999999999999987 65554433
No 350
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=4.1e-31 Score=302.48 Aligned_cols=272 Identities=24% Similarity=0.321 Sum_probs=197.9
Q ss_pred hhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecC-----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG----- 1016 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----- 1016 (1251)
...+|+..+.||+|+||.||+|... +|+.||||++..... ......+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567888999999999999999654 689999999965432 223456778999999999999999999886543
Q ss_pred ---CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC
Q 000859 1017 ---AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME 1093 (1251)
Q Consensus 1017 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 1093 (1251)
....++|+||+++ ++.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG------LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 2357899999975 788877653 34689999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHH
Q 000859 1094 AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRW 1172 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1172 (1251)
+||+|||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .....
T Consensus 155 ~kl~dfg~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-~~~~~ 230 (302)
T cd07864 155 IKLADFGLARLYNSEES---RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA-QLELI 230 (302)
T ss_pred EEeCcccccccccCCcc---cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 99999999976543221 11122356788999998764 457889999999999999999999997543211 11111
Q ss_pred HHHHHhccchhhhhhhccc----------C-CCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1173 VEMHMEMSGSAREELLDDQ----------M-KPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..............+.... . +.........+..+.+++.+||+.||.+||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1110000000000000000 0 0000011113567899999999999999999999875
No 351
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=3.1e-31 Score=301.14 Aligned_cols=265 Identities=22% Similarity=0.279 Sum_probs=203.1
Q ss_pred CCCcCceecccCCceEEEEEe----cCCcEEEEEEeccCC---chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCC
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL----ANGATVAVKKISCKD---DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 1018 (1251)
+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++++ +||+|+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~--~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT--DT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec--CC
Confidence 366778999999999999964 357889999986432 122345678999999999 69999999987744 34
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~d 148 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQ-------REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTD 148 (288)
T ss_pred EEEEEEecCCCCcHHHHHhh-------cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEE
Confidence 57899999999999999875 34588999999999999999999998 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCC--CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK--ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
||+++....... .......|+..|+|||...+.. .+.++||||+|+++|||++|+.||........ .......
T Consensus 149 fg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~~- 223 (288)
T cd05583 149 FGLSKEFLAEEE---ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS-QSEISRR- 223 (288)
T ss_pred Cccccccccccc---cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch-HHHHHHH-
Confidence 999876533211 1112245789999999987655 78899999999999999999999964321110 1111110
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCcccc
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIVDF 1242 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~~~ 1242 (1251)
... ...+.+...+..+.+++.+||+.||++|||++++.+.+...+-+...+.
T Consensus 224 ----------~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~ 275 (288)
T cd05583 224 ----------ILK----SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWD 275 (288)
T ss_pred ----------HHc----cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHH
Confidence 001 0111222245668899999999999999999999988887776665543
No 352
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=5.8e-31 Score=298.88 Aligned_cols=268 Identities=28% Similarity=0.384 Sum_probs=197.3
Q ss_pred CCcCceecccCCceEEEEEec-CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++|||++++++++........++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999665 58899999997653 2334467889999999999999999999887653456799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++ +|.+++... ...+++..+..++.|+++|++|||+. +++|+||||+||++++++.+||+|||.+...
T Consensus 81 ~~~~-~l~~~~~~~------~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 81 YMDH-DLTGLLDSP------EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred cccc-cHHHHHhcc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeec
Confidence 9974 899888653 24689999999999999999999999 9999999999999999999999999999765
Q ss_pred ccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ .....+..........
T Consensus 151 ~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 226 (287)
T cd07840 151 TKRNS---ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ-LEKIFELCGSPTDENW 226 (287)
T ss_pred cCCCc---ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchhhc
Confidence 43221 11222456788999997764 4578999999999999999999999976543211 1111110000000000
Q ss_pred hhh----hcccCCCCCCch--------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EEL----LDDQMKPLLPGE--------ECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~----~~~~~~~~~~~~--------~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... ......+..... ...+.++.+++.+|++.+|.+||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 227 PGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 000000000000 002567899999999999999999999875
No 353
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-32 Score=286.60 Aligned_cols=263 Identities=23% Similarity=0.333 Sum_probs=200.5
Q ss_pred HhhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-C-CC----ccceeceeeec
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-H-RH----LVKLMGHCCNK 1015 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~l~g~~~~~ 1015 (1251)
..+++|.+...+|+|.||.|-++ +...+..||||+++ .-....++..-|+++++++. + |+ +|.+.++|.-
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik--~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy- 162 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK--NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY- 162 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHH--HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc-
Confidence 34788999999999999999999 55568999999995 44456677888999999993 3 32 6777777743
Q ss_pred CCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-----
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS----- 1090 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~----- 1090 (1251)
.+..++|+|.+ |.++++|++++. -.+++.++++.|+.|++++++|||+. +++|.|+||+||++.+
T Consensus 163 -rghiCivfell-G~S~~dFlk~N~-----y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 163 -RGHICIVFELL-GLSTFDFLKENN-----YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred -cCceEEEEecc-ChhHHHHhccCC-----ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEE
Confidence 34568999999 569999998854 56789999999999999999999999 9999999999999932
Q ss_pred ---------------CCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhC
Q 000859 1091 ---------------NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSG 1155 (1251)
Q Consensus 1091 ---------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg 1155 (1251)
+..+|++|||.|+...+. ....+.|..|+|||++.+-.++.++||||+||+++|+.||
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG 305 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTG 305 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceeccC-------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeecc
Confidence 345899999999754222 2446889999999999999999999999999999999999
Q ss_pred CCCCCCccccchhHHHHHHHHHhccchhhhhhhccc----------------------------CCCC---CCchHHHHH
Q 000859 1156 KMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQ----------------------------MKPL---LPGEECAAY 1204 (1251)
Q Consensus 1156 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~---~~~~~~~~~ 1204 (1251)
..-|..-.+.+ ..+++....+.....++... .++. .........
T Consensus 306 ~~LFqtHen~E-----HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~ 380 (415)
T KOG0671|consen 306 ETLFQTHENLE-----HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHV 380 (415)
T ss_pred ceecccCCcHH-----HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHh
Confidence 99987654322 12222222222211111111 0000 011223556
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1205 QVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1205 ~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
++.+++++|+..||.+|+|++|+++.
T Consensus 381 ~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 381 QLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHHHHccCccccccHHHHhcC
Confidence 79999999999999999999999753
No 354
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=9e-31 Score=292.37 Aligned_cols=254 Identities=25% Similarity=0.373 Sum_probs=203.1
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|...+.||+|++|.||+|... +++.|++|++..... ....+.+.+|++++++++||||+++++.+........++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3677789999999999999665 789999999865442 34567889999999999999999999988655335679999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+|++|+||+++.++.++|+|||.+..
T Consensus 81 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 150 (260)
T cd06606 81 EYVSGGSLSSLLKKF-------GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKR 150 (260)
T ss_pred EecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence 999999999999763 3789999999999999999999998 999999999999999999999999999876
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
....... .......++..|+|||...+..++.++||||+|+++|++++|+.||........ ....
T Consensus 151 ~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~------ 215 (260)
T cd06606 151 LGDIETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-------ALYK------ 215 (260)
T ss_pred ccccccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-------HHHh------
Confidence 5433211 112234678999999999888899999999999999999999999976541110 0000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... .....+...+..+.+++.+|++.+|++||++.|+++
T Consensus 216 --~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 216 --IGSSG--EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred --ccccC--CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00000 111112233677999999999999999999999986
No 355
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=3.9e-31 Score=300.07 Aligned_cols=243 Identities=23% Similarity=0.385 Sum_probs=193.2
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
.+||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++|+||+++++++.. ....++||||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEEecCCCC
Confidence 4799999999999965 578999999985433 3345678899999999999999999998865 34579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 103 ~L~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~- 170 (292)
T cd06657 103 ALTDIVTH--------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 170 (292)
T ss_pred cHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-
Confidence 99998754 3478999999999999999999999 99999999999999999999999999987553221
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......|+..|+|||.+.+..++.++|+||+||++|||++|+.||.+....+. ..... .
T Consensus 171 ---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-----~~~~~------------~ 230 (292)
T cd06657 171 ---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-----MKMIR------------D 230 (292)
T ss_pred ---ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHH------------h
Confidence 112234678999999999888899999999999999999999999875422111 11000 0
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
...+........+..+.+++.+||+.||.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 231 NLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred hCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 011111111223456889999999999999999999987
No 356
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=251.08 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=200.6
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|...++||+|.||+||+|+ +.+++.||+|.++.+.+ +.......+|+.+++.+.|+|||+++++... +...-+|+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs--dkkltlvf 80 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLVF 80 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc--CceeEEeH
Confidence 35566789999999999995 55688999999986653 3345677899999999999999999997643 45567999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++. +|..|.... .+.++.+.++.++.|+++|+.|+|++ .+.|||+||.|.+++.+|+.|++|||+|+.
T Consensus 81 e~cdq-dlkkyfdsl------ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglara 150 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSL------NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARA 150 (292)
T ss_pred HHhhH-HHHHHHHhc------CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhh
Confidence 99975 888888764 46789999999999999999999999 999999999999999999999999999987
Q ss_pred cccccCCCCcccceeecccceecccccccCC-CCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccc-
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLK-ATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSG- 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~- 1181 (1251)
+.- .....+..+-|..|++|.++.+.. |+...|+||.||++.|+.. |++-|.+. ..++.+.+..........
T Consensus 151 fgi----pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~-dvddqlkrif~~lg~p~ed 225 (292)
T KOG0662|consen 151 FGI----PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTPTED 225 (292)
T ss_pred cCC----ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC-cHHHHHHHHHHHhCCCccc
Confidence 643 223334456789999999998765 8899999999999999998 66666544 333333333222211111
Q ss_pred --hhhhhhhcccCCCCCCchHHHH-------HHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 --SAREELLDDQMKPLLPGEECAA-------YQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 --~~~~~~~~~~~~~~~~~~~~~~-------~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..+...-+-...|.++...... ..-.+++.+.+.-+|.+|.++++.++
T Consensus 226 ~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 226 QWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred cCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1122333333444444322211 22367888888889999999998775
No 357
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=4.1e-31 Score=295.35 Aligned_cols=245 Identities=23% Similarity=0.287 Sum_probs=186.3
Q ss_pred ceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHH-hccCCCccceeceeeecCCCceeEEEeec
Q 000859 952 FIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLG-RIRHRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~-~l~h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.||+|+||.||+|.. .+++.||||++..... ......+..|..++. ..+|+|++++++++.. ....++|+||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEecc
Confidence 4699999999999955 4689999999864321 122234455555544 4489999999998854 34579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
++++|.++++.. ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||.++....
T Consensus 80 ~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 149 (260)
T cd05611 80 NGGDCASLIKTL-------GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE 149 (260)
T ss_pred CCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc
Confidence 999999999763 4688999999999999999999999 999999999999999999999999999865422
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
.....|+..|+|||...+..++.++||||+|+++|||++|..||......+ .......
T Consensus 150 --------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~--------- 207 (260)
T cd05611 150 --------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-----VFDNILS--------- 207 (260)
T ss_pred --------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-----HHHHHHh---------
Confidence 122457889999999988889999999999999999999999997543211 1111100
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.............+..+.+++.+||+.+|++||++.++.+.+.
T Consensus 208 --~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 208 --RRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred --cccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 0000000111124567899999999999999998766655443
No 358
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=8.4e-31 Score=293.47 Aligned_cols=244 Identities=22% Similarity=0.284 Sum_probs=187.7
Q ss_pred hhcCCCcCcee--cccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCc
Q 000859 944 ATNNLSDEFII--GSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 944 ~~~~~~~~~~l--G~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 1019 (1251)
..++|++.+.+ |+|+||.||++.. .+++.+|+|.+....... .|+.....+ +||||+++++.+... ..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~--~~ 83 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTL--KG 83 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecC--Ce
Confidence 34556666665 9999999999954 568899999986432111 122222222 799999999988654 45
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-CeEEcc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-EAHLGD 1098 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~D 1098 (1251)
.++||||+++|+|.+++... ..++++++..++.|+++|++|||+. +++||||||+||+++.++ .++|+|
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKE-------GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEec
Confidence 79999999999999999763 3789999999999999999999999 999999999999999998 999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
||.++..... ....|+..|+|||++.+..++.++||||+||++|||++|+.||......+.....+....
T Consensus 154 fg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 223 (267)
T PHA03390 154 YGLCKIIGTP--------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-- 223 (267)
T ss_pred CccceecCCC--------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--
Confidence 9998754221 123578999999999988999999999999999999999999985543332222221111
Q ss_pred ccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 000859 1179 MSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-SRQVCD 1229 (1251)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~ 1229 (1251)
....+.....+..+.+++.+|++.+|.+||+ ++|+++
T Consensus 224 --------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 --------------QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --------------cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0111122235567899999999999999996 688874
No 359
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=1.2e-30 Score=291.25 Aligned_cols=253 Identities=29% Similarity=0.393 Sum_probs=202.4
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||.|+||.||++... +++.||+|++..... ....+.+.+|+++++.++|||++++++.+... ...++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CEEEEEE
Confidence 4777889999999999999654 689999999975442 34567788999999999999999999987654 5679999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.++++.... ....+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+..
T Consensus 79 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~ 152 (258)
T cd08215 79 EYADGGDLSQKIKKQKK---EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKV 152 (258)
T ss_pred EecCCCcHHHHHHHhhc---cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceee
Confidence 99999999999976421 236789999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
..... .......|++.|+|||...+..++.++|+||+|+++|+|++|+.||...... .....
T Consensus 153 ~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~--------- 214 (258)
T cd08215 153 LSSTV----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL-----ELALK--------- 214 (258)
T ss_pred cccCc----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH-----HHHHH---------
Confidence 53321 1222346889999999998888999999999999999999999999654321 11111
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...... +.. +...+..+.+++.+||+.+|++|||++++++.
T Consensus 215 --~~~~~~-~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 215 --ILKGQY-PPI--PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred --HhcCCC-CCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111 111 11345678899999999999999999999753
No 360
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=6e-31 Score=304.26 Aligned_cols=267 Identities=21% Similarity=0.301 Sum_probs=191.1
Q ss_pred eeccc--CCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecC
Q 000859 953 IIGSG--GSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYME 1028 (1251)
Q Consensus 953 ~lG~G--~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~ 1028 (1251)
.||+| +||+||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++... ...++|+||++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~~~~v~e~~~ 82 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--SWLWVISPFMA 82 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--CceEEEEeccc
Confidence 46666 9999999965 579999999987543 233457788999999999999999999998653 45699999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccc
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVED 1108 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 1108 (1251)
+|++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+......
T Consensus 83 ~~~l~~~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 83 YGSANSLLKTYF-----PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN 154 (328)
T ss_pred CCCHHHHHHhhc-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc
Confidence 999999987642 24588999999999999999999999 9999999999999999999999999865433221
Q ss_pred cCCCC---cccceeecccceecccccccC--CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH-------
Q 000859 1109 YNSNT---ESNTWFAGSYGYIAPEYAYSL--KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH------- 1176 (1251)
Q Consensus 1109 ~~~~~---~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~------- 1176 (1251)
..... .......++..|+|||++.+. .++.++||||+||++|||++|+.||.......... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLL-QKLKGPPYSPLDI 233 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHH-HHhcCCCCCCccc
Confidence 11110 001112356679999998763 47899999999999999999999997653221110 000000
Q ss_pred ---------Hh-----ccchhhhhhhc-----cc--CCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1177 ---------ME-----MSGSAREELLD-----DQ--MKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1177 ---------~~-----~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. ......+.... .. .....+........+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 00000000000 00 000111233466789999999999999999999999743
No 361
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=6.1e-31 Score=299.67 Aligned_cols=268 Identities=21% Similarity=0.302 Sum_probs=192.9
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
++|+..+.||+|++|+||+|... +++.||+|++..... ....+.+.+|++++++++||||+++++++.. ....++|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS--EKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--CCeEEEE
Confidence 46888889999999999999654 689999999864432 2234578899999999999999999998864 3467999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCeEEcccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEAHLGDFGLA 1102 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a 1102 (1251)
|||++ +++.+++.... ...+++..+..++.||+.|++|||++ +++||||+|+||+++. ++.+||+|||.+
T Consensus 80 ~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSP-----DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred Eeccc-ccHHHHHHhCC-----CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 99996 58888876532 23467888899999999999999999 9999999999999985 567999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
+...... .......++..|+|||.+.+. .++.++||||+||++|+|+||+.||......+. .............
T Consensus 151 ~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~~~~~~~~ 225 (294)
T PLN00009 151 RAFGIPV----RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFRILGTPNE 225 (294)
T ss_pred cccCCCc----cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCh
Confidence 7543221 111223568899999988664 578999999999999999999999976533221 1111100000000
Q ss_pred hh------hhhhhcc--cCCCCCC--chHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 SA------REELLDD--QMKPLLP--GEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 ~~------~~~~~~~--~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. ...+... ....... .....+.++.+++.+|++.+|++||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 226 ETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0000000 0000000 00113456889999999999999999999986
No 362
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=7.6e-31 Score=292.47 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=200.8
Q ss_pred CCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|+||.||++. ..+++.||+|++.... .......+.+|++++++++|+||+++++++... ...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG--NKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC--CEEEEEe
Confidence 46778899999999999995 4578899999986533 334456778999999999999999999987654 5679999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++.+.. .....+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||.++.
T Consensus 79 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~ 152 (256)
T cd08530 79 EYAPFGDLSKAISKRK---KKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKV 152 (256)
T ss_pred hhcCCCCHHHHHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhh
Confidence 9999999999987632 1235689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... ......++..|+|||.+.+..++.++|+||+|+++||+++|+.||......+. ..
T Consensus 153 ~~~~------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~--~~------------- 211 (256)
T cd08530 153 LKKN------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL--RY------------- 211 (256)
T ss_pred hccC------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH-------------
Confidence 5432 11123578899999999998999999999999999999999999975532111 00
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. .....+. .+...+.++.+++.+|++.+|++||++.|+++
T Consensus 212 -~~-~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 212 -KV-QRGKYPP--IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -HH-hcCCCCC--CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0011111 12245677999999999999999999999975
No 363
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=2.1e-30 Score=294.27 Aligned_cols=267 Identities=24% Similarity=0.313 Sum_probs=195.1
Q ss_pred CCcCceecccCCceEEEEEec-CCcEEEEEEeccCCch-hhhHHHHHHHHHHHhc---cCCCccceeceeeecCC---Cc
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDH-LLNKSFTREVKTLGRI---RHRHLVKLMGHCCNKGA---GS 1019 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~---~~ 1019 (1251)
|++.+.||+|+||.||+|..+ +++.||+|++...... .....+.+|+.+++++ +|||++++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566778999999999999765 4899999999754332 2234566788887766 59999999998876433 23
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.+++|||++ ++|.+++.... ...+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.+||+||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP-----KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEecc
Confidence 689999997 58999887643 23589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
|.+..+.... ......++..|+|||.+.+..++.++|+|||||++|||++|+.||......+ ............
T Consensus 152 g~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ 225 (287)
T cd07838 152 GLARIYSFEM-----ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGLP 225 (287)
T ss_pred CcceeccCCc-----ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCCC
Confidence 9987653221 1122357889999999998899999999999999999999999987653322 111111111000
Q ss_pred cchh-h------hhhhcccCCCCC-CchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSA-R------EELLDDQMKPLL-PGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~-~------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.... . ............ ......+..+.+++.+||+.||++||+++|++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 226 SEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred ChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000 0 000000000000 001123467789999999999999999999875
No 364
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1.3e-30 Score=295.38 Aligned_cols=266 Identities=22% Similarity=0.321 Sum_probs=194.8
Q ss_pred CCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|.+.+.||+|+||+||+|... +++.||||++.............+|+..+++++ ||||+++++++.. ....++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEEEe
Confidence 556778999999999999764 578999999865543333345567999999998 9999999998865 455799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+ +|++.+++.... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||.++..
T Consensus 79 ~~-~~~l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~ 149 (283)
T cd07830 79 YM-EGNLYQLMKDRK-----GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREI 149 (283)
T ss_pred cC-CCCHHHHHHhcc-----cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceec
Confidence 99 789999987642 34689999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccc-cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc----
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAY-SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS---- 1180 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---- 1180 (1251)
.... ......++..|+|||.+. ...++.++|+||||+++|||++|+.||......+... ..........
T Consensus 150 ~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 223 (283)
T cd07830 150 RSRP-----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY-KICSVLGTPTKQDW 223 (283)
T ss_pred cCCC-----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH-HHHHhcCCCChhhh
Confidence 3211 112246788999999875 4457899999999999999999999996553322110 0000000000
Q ss_pred --chhhhhhhcccCCCCCCc-----hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1181 --GSAREELLDDQMKPLLPG-----EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1181 --~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
........+.......+. ....+..+.+++.+||+.||++|||++|++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 224 PEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000000000000 00124678899999999999999999998753
No 365
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=1.1e-30 Score=290.87 Aligned_cols=248 Identities=29% Similarity=0.438 Sum_probs=199.1
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+|+..+.||+|++|.||+|... +++.||+|.+..... ....+.+.+|++++++++|||++++++++... ...+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS--DSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC--CEEEEEE
Confidence 4677889999999999999554 678999999975542 23557889999999999999999999987553 5579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+..
T Consensus 79 e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 148 (254)
T cd06627 79 EYAENGSLRQIIKKF-------GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATK 148 (254)
T ss_pred ecCCCCcHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEecccccee
Confidence 999999999998763 5689999999999999999999999 999999999999999999999999999976
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
....... .....++..|+|||...+..++.++||||+|+++|+|++|+.||....... .....
T Consensus 149 ~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~----~~~~~--------- 211 (254)
T cd06627 149 LNDVSKD----DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA----ALFRI--------- 211 (254)
T ss_pred cCCCccc----ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHH---------
Confidence 5432211 123467889999999888889999999999999999999999987543111 10000
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... + +.+...+..+.+++.+|++.+|++|||+.+++.
T Consensus 212 ---~~~~~-~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 212 ---VQDDH-P--PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---hccCC-C--CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00000 1 112223567889999999999999999999874
No 366
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=8e-31 Score=298.04 Aligned_cols=252 Identities=24% Similarity=0.302 Sum_probs=191.8
Q ss_pred CCCcCceecccCCceEEEEEe----cCCcEEEEEEeccCCc---hhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCC
Q 000859 947 NLSDEFIIGSGGSGTVYKAEL----ANGATVAVKKISCKDD---HLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 1018 (1251)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ....+.+.+|+++++++ +|++|+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--DT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec--CC
Confidence 367788999999999999965 3689999999864321 22346678899999999 69999999987754 34
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++|+||+++++|.+++.. ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~-------~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 148 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQ-------RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTD 148 (290)
T ss_pred eEEEEEecCCCCcHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEee
Confidence 57899999999999999976 34678999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccC--CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL--KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
||+++....... .......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||...... .....+....
T Consensus 149 fg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~ 224 (290)
T cd05613 149 FGLSKEFHEDEV---ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRI 224 (290)
T ss_pred Cccceecccccc---cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHh
Confidence 999876532211 111224688999999988753 4678999999999999999999998643211 1111111110
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCD 1229 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1229 (1251)
. . ...+.+...+..+.+++.+|++.||++|| +++++++
T Consensus 225 ~-----------~----~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 225 L-----------K----SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred h-----------c----cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 0 01111222456788999999999999997 6666654
No 367
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.5e-32 Score=273.56 Aligned_cols=269 Identities=23% Similarity=0.365 Sum_probs=202.2
Q ss_pred hcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecC------
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG------ 1016 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------ 1016 (1251)
...|....+||+|.||+||+|+ .++|+.||+|++--.. .+.-.....+|++++..+.|+|++.++..|....
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 3456667789999999999995 4567889999875322 2223356679999999999999999998876432
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEE
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHL 1096 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 1096 (1251)
....|+||++++. +|...|... ...++..++.+++.++..|+.|+|.. .|+|||+||+||+++.+|.+||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~------~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilkl 165 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNR------KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKL 165 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCc------cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEe
Confidence 2236899999986 888888664 35689999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1097 GDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
+|||+|+.+....+....+.+..+-|..|++||.+.+. .|+.+.|||..||++.||+||.+-+.+...... ...+..
T Consensus 166 ADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq--l~~Is~ 243 (376)
T KOG0669|consen 166 ADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ--LHLISQ 243 (376)
T ss_pred eccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH--HHHHHH
Confidence 99999998876655555556667789999999988764 699999999999999999999999876533111 111100
Q ss_pred HH----------------------hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1176 HM----------------------EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1176 ~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. +.........+....++.. -.++..+++..++..||.+|+++.++++.
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~-----kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYV-----KDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhccccc-----CChhHHHHHHHHhccCcccCcchHhhhch
Confidence 00 0001111111222222211 12456789999999999999999998865
No 368
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=4.3e-31 Score=320.31 Aligned_cols=276 Identities=17% Similarity=0.237 Sum_probs=187.2
Q ss_pred hhcCCCcCceecccCCceEEEEEecC--CcEEEEEEe--------------cc--CCchhhhHHHHHHHHHHHhccCCCc
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELAN--GATVAVKKI--------------SC--KDDHLLNKSFTREVKTLGRIRHRHL 1005 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~--~~~vavK~~--------------~~--~~~~~~~~~~~~E~~~l~~l~h~ni 1005 (1251)
...+|++.+.||+|+||+||+|..+. +..+++|.+ .. .........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34679999999999999999985432 222222211 00 1122234568899999999999999
Q ss_pred cceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCC
Q 000859 1006 VKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSN 1085 (1251)
Q Consensus 1006 v~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 1085 (1251)
|++++++... ...++|+|++. +++.+++...... ........++..++.|++.||+|||++ +||||||||+|
T Consensus 226 v~l~~~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~N 297 (501)
T PHA03210 226 LKIEEILRSE--ANTYMITQKYD-FDLYSFMYDEAFD--WKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLEN 297 (501)
T ss_pred CcEeEEEEEC--CeeEEEEeccc-cCHHHHHhhcccc--ccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence 9999988654 44689999985 5888887653221 122334667788999999999999999 99999999999
Q ss_pred eeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCC-CCCccc
Q 000859 1086 ILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMP-TDATFG 1164 (1251)
Q Consensus 1086 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p-~~~~~~ 1164 (1251)
||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+ +.....
T Consensus 298 ILl~~~~~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 298 IFLNCDGKIVLGDFGTAMPFEKERE---AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred EEECCCCCEEEEeCCCceecCcccc---cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 9999999999999999986643211 112235789999999999999999999999999999999998754 443322
Q ss_pred cc-hhHHHHHHHHHh----ccch--hhhhhhcccCCCCCC-c------hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1165 VE-MDMVRWVEMHME----MSGS--AREELLDDQMKPLLP-G------EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1165 ~~-~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~-~------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. ....+....... .... ....+++.......+ . ....+.++.+++.+|++.||++|||++|+++.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 11 111111111000 0000 000000000000000 0 00123456788999999999999999999863
No 369
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=1.2e-30 Score=294.16 Aligned_cols=242 Identities=21% Similarity=0.251 Sum_probs=183.3
Q ss_pred eecccCCceEEEEEe-cCCcEEEEEEeccCCch--hhhHHHHHHHHH---HHhccCCCccceeceeeecCCCceeEEEee
Q 000859 953 IIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH--LLNKSFTREVKT---LGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~---l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
.||+|+||.||+|.. .+++.||+|.+...... .....+..|..+ ++...||+|+++++++.. ....++||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEEec
Confidence 489999999999954 56899999998654311 112233444443 444579999999987754 3457899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++|+|.+++.. .+.+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.+.
T Consensus 79 ~~g~~L~~~l~~-------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~ 148 (278)
T cd05606 79 MNGGDLHYHLSQ-------HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 148 (278)
T ss_pred CCCCcHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence 999999998865 34689999999999999999999999 99999999999999999999999999987543
Q ss_pred cccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSARE 1185 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1251)
.. ......|+..|+|||.+.+. .++.++||||+||++|||++|+.||.+............
T Consensus 149 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~------------ 210 (278)
T cd05606 149 KK------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM------------ 210 (278)
T ss_pred cc------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH------------
Confidence 21 11224689999999998754 689999999999999999999999976532211110000
Q ss_pred hhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 000859 1186 ELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP-----SSRQVCD 1229 (1251)
Q Consensus 1186 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~ 1229 (1251)
.. ...... +...+.++.+++.+|+..+|.+|| +++++++
T Consensus 211 --~~-~~~~~~--~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 211 --TL-TMAVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --hh-ccCCCC--CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 00 000111 112356788999999999999999 9999975
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=5e-31 Score=306.49 Aligned_cols=269 Identities=24% Similarity=0.316 Sum_probs=194.3
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCC-------
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA------- 1017 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------- 1017 (1251)
.+|...+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 5788899999999999999954 5689999999865543 345678899999999999999999987654332
Q ss_pred -----CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec-CC
Q 000859 1018 -----GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD-SN 1091 (1251)
Q Consensus 1018 -----~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~ 1091 (1251)
...++|+||++ ++|.+++.. ..+++..++.++.||++|++|||+. +|+||||||+||+++ ++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~ 151 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ--------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTED 151 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCC
Confidence 23589999997 589888864 3588999999999999999999999 999999999999997 45
Q ss_pred CCeEEcccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHH
Q 000859 1092 MEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMV 1170 (1251)
Q Consensus 1092 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~ 1170 (1251)
+.+|++|||.++........ ........++..|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+.. .
T Consensus 152 ~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~-~ 229 (342)
T cd07854 152 LVLKIGDFGLARIVDPHYSH-KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM-Q 229 (342)
T ss_pred ceEEECCcccceecCCcccc-ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-H
Confidence 67899999999765322111 111122357889999997654 56888999999999999999999999755332211 1
Q ss_pred HHHHHHHh--------ccchhhhhhhcccCCCCCCch---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1171 RWVEMHME--------MSGSAREELLDDQMKPLLPGE---ECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1171 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
........ ..................+.. ...+.++.+++.+|++.||++|||++|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 11000000 000000000000011111111 113456889999999999999999999985
No 371
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=1e-30 Score=296.30 Aligned_cols=265 Identities=25% Similarity=0.357 Sum_probs=197.5
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|+..+.||+|++|.||+|.. .+++.||+|++...... .....+.+|++++++++|+||+++++++... ...++|+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK--GDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--CCEEEEEe
Confidence 45677899999999999965 47899999998654322 3456788999999999999999999987543 55799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++ ++.+++... ...+++.++..++.|+++|++|||+. +|+|+||||+||+++.++.+||+|||.+...
T Consensus 79 ~~~~-~l~~~l~~~------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~ 148 (283)
T cd05118 79 FMDT-DLYKLIKDR------QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSF 148 (283)
T ss_pred ccCC-CHHHHHHhh------cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEec
Confidence 9975 898888763 24689999999999999999999999 9999999999999999999999999998766
Q ss_pred ccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
.... .......++..|+|||.+.+. .++.++|+||+|+++|+++||+.||......+. .....+..........
T Consensus 149 ~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 223 (283)
T cd05118 149 GSPV----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPEVW 223 (283)
T ss_pred CCCc----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchHhc
Confidence 4332 111224578899999998776 789999999999999999999999975533211 1110000000000000
Q ss_pred hhhhc-------ccCC----CCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1185 EELLD-------DQMK----PLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1185 ~~~~~-------~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
..... .... .........+.++.+++.+||+.||.+||++++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 224 PKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred ccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000 0000 000011235678999999999999999999999975
No 372
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=6e-31 Score=297.60 Aligned_cols=252 Identities=24% Similarity=0.340 Sum_probs=199.3
Q ss_pred cCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~ 1021 (1251)
++|...+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++ ||||+++++++.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~ 78 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD--EENLY 78 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC--CceEE
Confidence 3678888999999999999965 478999999986432 2334567889999999998 9999999998754 44579
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+||||+++++|.+++.+. +.+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||+
T Consensus 79 lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~ 148 (280)
T cd05581 79 FVLEYAPNGELLQYIRKY-------GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGT 148 (280)
T ss_pred EEEcCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCcc
Confidence 999999999999999763 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCC----------------CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCcccc
Q 000859 1102 AKALVEDYNSN----------------TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGV 1165 (1251)
Q Consensus 1102 a~~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~ 1165 (1251)
+.......... ........++..|+|||......++.++|+||+|+++|++++|+.||......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (280)
T cd05581 149 AKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY 228 (280)
T ss_pred ccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 87654322110 11222346789999999998888999999999999999999999999755311
Q ss_pred chhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 000859 1166 EMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS----RQVCD 1229 (1251)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~eil~ 1229 (1251)
.. .... .. .....+...+..+.+++.+||+.+|++||++ +++++
T Consensus 229 ~~-----~~~~-----------~~----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 LT-----FQKI-----------LK----LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HH-----HHHH-----------Hh----cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00 0000 00 0011112235568899999999999999999 77664
No 373
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.6e-30 Score=297.88 Aligned_cols=248 Identities=29% Similarity=0.412 Sum_probs=192.5
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccC--CchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCK--DDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+.+|+++++.++|+|++++++++... ...++||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 94 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HTAWLVM 94 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CeeEEEE
Confidence 55567899999999999965 46789999998642 2233445788899999999999999999988654 4568999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+. |++.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++..
T Consensus 95 e~~~-~~l~~~~~~~------~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 164 (308)
T cd06634 95 EYCL-GSASDLLEVH------KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 164 (308)
T ss_pred EccC-CCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCccccee
Confidence 9996 6888877543 24578999999999999999999999 999999999999999999999999999865
Q ss_pred cccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
.... ....|+..|+|||.+. ...++.++|||||||++|||++|+.||......+. ...
T Consensus 165 ~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~------ 225 (308)
T cd06634 165 MAPA--------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYH------ 225 (308)
T ss_pred ecCc--------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-----HHH------
Confidence 4221 1245788999999874 35678899999999999999999999865422110 000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLN 1233 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 1233 (1251)
... ...+.. .....+..+.+++.+||+.+|++||+++++++.-..
T Consensus 226 -----~~~-~~~~~~-~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 226 -----IAQ-NESPAL-QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred -----Hhh-cCCCCc-CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 000 000111 122345678899999999999999999999876443
No 374
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.4e-30 Score=301.89 Aligned_cols=275 Identities=25% Similarity=0.316 Sum_probs=203.0
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhccCCCccceeceeeecC---CCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD-HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG---AGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~---~~~~~ 1021 (1251)
+|.+.+.||.|+||.||+|... +++.||||++..... ....+.+.+|+++++.++||||+++++++.... ....+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778889999999999999654 589999999875432 344577899999999999999999999876543 12468
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
++|||++ ++|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.
T Consensus 81 lv~e~~~-~~l~~~l~~~-------~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 81 IVTELME-TDLHKVIKSP-------QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred EEecchh-hhHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 9999997 5899988753 4789999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
+......... ........++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||.+....+. ...+.......
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~ 226 (330)
T cd07834 150 ARGVDPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ--LNLIVEVLGTP 226 (330)
T ss_pred eEeecccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHhcCCC
Confidence 9865432211 1112234678899999999877 789999999999999999999999976643221 11110000000
Q ss_pred ---------chhhhhhhccc-CCCCCC---chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhc
Q 000859 1181 ---------GSAREELLDDQ-MKPLLP---GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL--LLNVF 1235 (1251)
Q Consensus 1181 ---------~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~~~ 1235 (1251)
.......+... .....+ .....+..+.+++.+||+.+|++||+++++++. ++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred ChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 00000000000 000000 001135678899999999999999999999874 44443
No 375
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.5e-30 Score=301.51 Aligned_cols=272 Identities=24% Similarity=0.270 Sum_probs=194.2
Q ss_pred CCCcCceecccCCceEEEEEec-C--CcEEEEEEeccCC-chhhhHHHHHHHHHHHhc-cCCCccceeceeeec--CCCc
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-N--GATVAVKKISCKD-DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK--GAGS 1019 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~--~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~--~~~~ 1019 (1251)
+|+..+.||+|+||.||+|+.. + +..||+|++.... .....+.+.+|+++++++ +||||+++++++... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3677789999999999999654 3 6789999986432 222346778899999999 599999999865432 2234
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++++||+. ++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~e~~~-~~L~~~l~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS-------GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred EEEEEeccc-CCHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 678889886 689998865 35689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
|.++.+...............||..|+|||...+ ..++.++||||+||++|++++|+.||........ ..........
T Consensus 150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 228 (332)
T cd07857 150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ-LNQILQVLGT 228 (332)
T ss_pred CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH-HHHHHHHhCC
Confidence 9998654332222222233578999999998765 4689999999999999999999999976432110 0000000000
Q ss_pred ccc--------hhhhhh---hcccCCCCCC-chHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1179 MSG--------SAREEL---LDDQMKPLLP-GEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1179 ~~~--------~~~~~~---~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
... ...... ........+. ........+.+++.+|++.||++|||++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 229 PDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 000000 0000000000 001124578899999999999999999998643
No 376
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.2e-30 Score=303.25 Aligned_cols=269 Identities=20% Similarity=0.327 Sum_probs=196.9
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----C
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA----G 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~ 1018 (1251)
..+|...+.||+|+||.||+|.. .+|+.||||++.... .......+.+|++++++++||||+++++++..... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 36788889999999999999964 578999999986543 22234567899999999999999999998764422 2
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++|+||+.. ++.++.. ..++++.+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~d 160 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILD 160 (342)
T ss_pred eEEEEeccccc-CHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEee
Confidence 35899999964 6766542 3578999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+...... ....... .
T Consensus 161 fg~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-~~~~~~~-~ 231 (342)
T cd07879 161 FGLARHADA-------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKV-T 231 (342)
T ss_pred CCCCcCCCC-------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh-c
Confidence 999875421 1122467889999998876 4688999999999999999999999976432111 1110000 0
Q ss_pred hccchhh---------hhhhcccCCCCCCch------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhcCC
Q 000859 1178 EMSGSAR---------EELLDDQMKPLLPGE------ECAAYQVLEIALQCTKTSPQERPSSRQVCDL--LLNVFNN 1237 (1251)
Q Consensus 1178 ~~~~~~~---------~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~--L~~~~~~ 1237 (1251)
....... ...... .+..+.. ...+.++.+++.+||+.||++||++++++.. ++.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSYIKS--LPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred CCCCHHHHHHhcccchHHHHhh--cCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 0000000 000000 0000000 1134568899999999999999999999854 6666543
No 377
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.6e-30 Score=302.20 Aligned_cols=273 Identities=19% Similarity=0.293 Sum_probs=198.5
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---- 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---- 1017 (1251)
..++|+..+.||+|+||.||+|. ..+++.||||++.... .....+.+.+|++++++++||||+++++++.....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 45679999999999999999995 5578999999985432 23344568899999999999999999998764432
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH--------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 2358999999 6799888764 3588999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
|||.+...... .....++..|+|||.+.+ ..++.++|+||+||++|++++|+.||.+...... ........
T Consensus 161 dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~ 232 (343)
T cd07880 161 DFGLARQTDSE-------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVT 232 (343)
T ss_pred ecccccccccC-------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhc
Confidence 99998754221 122456889999998875 4588999999999999999999999975532111 11100000
Q ss_pred Hh--------ccchhhhhhhcccCCC---CC-CchHHHHHHHHHHHHHccccCCCCCCCHHHHH--HHHHhhcC
Q 000859 1177 ME--------MSGSAREELLDDQMKP---LL-PGEECAAYQVLEIALQCTKTSPQERPSSRQVC--DLLLNVFN 1236 (1251)
Q Consensus 1177 ~~--------~~~~~~~~~~~~~~~~---~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil--~~L~~~~~ 1236 (1251)
.. ................ .+ ......+.++.+++.+|++.||++|||+.+++ ..++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 00 0000000000000000 00 00012345688999999999999999999998 44444433
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.4e-31 Score=303.87 Aligned_cols=256 Identities=25% Similarity=0.367 Sum_probs=212.3
Q ss_pred HhhcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec---CC
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK---GA 1017 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~---~~ 1017 (1251)
..+..|++.+.||.|.+|.||++ ..++++.+|||++....+ ..++++.|.++++.. +|||++.+||+|... .+
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d--~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED--EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc--ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 34556788889999999999999 456789999999865444 346778899999988 799999999988754 34
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
+..|+|||||.+|+.-|..++-. +..+.|+.+..|++.++.|+.|||.. .++|||||-.||+++.++.||++
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~-----g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK-----GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc-----ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEe
Confidence 56899999999999999998753 67899999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceecccccccC-----CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-----KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRW 1172 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1172 (1251)
|||.+..+. ..........||+.|||||++... .|+.++|+||+|++..||.-|.+|+.++.+...
T Consensus 166 DFGvSaQld----sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra----- 236 (953)
T KOG0587|consen 166 DFGVSAQLD----STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA----- 236 (953)
T ss_pred eeeeeeeee----cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-----
Confidence 999987653 333444557899999999998743 478899999999999999999999987744211
Q ss_pred HHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1173 VEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
--.+.+...|.+..++....++.++|..|+.+|.++||++.++++
T Consensus 237 ------------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ------------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 011223344555567778899999999999999999999998764
No 379
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.5e-30 Score=299.26 Aligned_cols=274 Identities=22% Similarity=0.292 Sum_probs=196.1
Q ss_pred hcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCch-hhhHHHHHHHHHHHhccCCCccceeceeeecCC-----
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDDH-LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA----- 1017 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----- 1017 (1251)
..+|+..+.||+|+||.||+|.. .+++.||||++...... .....+.+|++++++++||||+++++++.....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46788999999999999999965 46899999998644322 223466789999999999999999997765432
Q ss_pred -CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEE
Q 000859 1018 -GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHL 1096 (1251)
Q Consensus 1018 -~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 1096 (1251)
...++|+||+++ ++.+++... ...+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~------~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l 156 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP------SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKI 156 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 246899999964 777777643 34689999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccccCCCC-------cccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchh
Q 000859 1097 GDFGLAKALVEDYNSNT-------ESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMD 1168 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~ 1168 (1251)
+|||+++.......... .......+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+.......
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999976543222111 112234678889999987654 5889999999999999999999999755332211
Q ss_pred HHHHHHHHHhccchhh------hhhhcccCCCCCCch-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1169 MVRWVEMHMEMSGSAR------EELLDDQMKPLLPGE-----ECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1169 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
. .............. ....+.......+.. ......+.+++.+|++.||++|||+.|++.
T Consensus 237 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 H-LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred H-HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1 11100000000000 000000000000000 112256889999999999999999999875
No 380
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.9e-30 Score=296.24 Aligned_cols=245 Identities=30% Similarity=0.398 Sum_probs=190.4
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|...+.||+|+||+||+|.. .+++.||+|++.... .....+.+.+|+++++.++|||++++++++... ...++||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~ 100 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE--HTAWLVM 100 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CEEEEEE
Confidence 55566799999999999964 468899999986432 223345788899999999999999999988654 4579999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||+. |++.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+..
T Consensus 101 e~~~-~~l~~~l~~~------~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~ 170 (313)
T cd06633 101 EYCL-GSASDLLEVH------KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASK 170 (313)
T ss_pred ecCC-CCHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcc
Confidence 9996 6888887653 34689999999999999999999999 999999999999999999999999998854
Q ss_pred cccccCCCCcccceeecccceecccccc---cCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAY---SLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
.. ......|+..|+|||.+. ...++.++|||||||++|||++|+.||........ ......
T Consensus 171 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~~--- 234 (313)
T cd06633 171 SS--------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----LYHIAQ--- 234 (313)
T ss_pred cC--------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHHh---
Confidence 21 112246788999999874 45688899999999999999999999865422111 000000
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. .+.. .....+..+.+++.+||+.+|.+||++++++..
T Consensus 235 --------~~-~~~~-~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 235 --------ND-SPTL-QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --------cC-CCCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0111 111234568899999999999999999999864
No 381
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=9.9e-31 Score=301.76 Aligned_cols=269 Identities=23% Similarity=0.306 Sum_probs=198.7
Q ss_pred HHHhhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCC
Q 000859 941 IMGATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 941 ~~~~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 1018 (1251)
+...+++|+..+.||+|+||.||+|. ..+++.||||++.... .....+.+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~ 83 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL-E 83 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC-C
Confidence 34567889999999999999999995 4578999999885432 2234567889999999999999999999876533 3
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..++++||+ +++|.++++. ..+++..+..++.|+++|++|||+. +|+||||+|+||++++++.+||+|
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~--------~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~d 151 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS--------RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICD 151 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCc
Confidence 468999998 5689888864 3478888889999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 1177 (1251)
||.++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...+.+...
T Consensus 152 fg~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~-~~~~~~~~~ 223 (328)
T cd07856 152 FGLARIQDP-------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ-FSIITDLLG 223 (328)
T ss_pred cccccccCC-------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhC
Confidence 999865321 1122356889999998765 5689999999999999999999999975533111 111111100
Q ss_pred hccchhhh--------hhhcccC-CCCCCch---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1178 EMSGSARE--------ELLDDQM-KPLLPGE---ECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1178 ~~~~~~~~--------~~~~~~~-~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
........ ....... ....+.. ...+.++.+++.+|++.+|++||++++++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 224 TPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0000000 0011111 1134678999999999999999999998765
No 382
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.4e-30 Score=301.02 Aligned_cols=272 Identities=21% Similarity=0.290 Sum_probs=198.8
Q ss_pred HHHHHhhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecC
Q 000859 939 EDIMGATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 939 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 1016 (1251)
.++...+++|...+.||+|+||.||+|. ..+++.||+|++.... .....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 4455677889999999999999999995 4578999999986532 2233466788999999999999999999875432
Q ss_pred ----CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1017 ----AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1017 ----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
....++++|++ +++|.++++. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKC--------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 12357788876 7899888764 3589999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHH
Q 000859 1093 EAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVR 1171 (1251)
Q Consensus 1093 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~ 1171 (1251)
.+||+|||+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...
T Consensus 158 ~~kl~dfg~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~ 229 (345)
T cd07877 158 ELKILDFGLARHTDD-------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKL 229 (345)
T ss_pred CEEEecccccccccc-------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 999999999875421 1123467889999998766 5688899999999999999999999965432211 111
Q ss_pred HHHHHHh--------ccchhhhhhhccc-CCCCCCc---hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1172 WVEMHME--------MSGSAREELLDDQ-MKPLLPG---EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1172 ~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....... ............. ..+.... ....++++.+++.+|++.||.+||++.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 230 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 1110000 0000000000000 0000000 00134568899999999999999999998865
No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=288.79 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=194.2
Q ss_pred ceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 952 FIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
++||.|.||+||-| +.++|+.||||++.+.. ......+...|++|+++++||.||.+.-.| +.++..++|||.+.
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~--ET~ervFVVMEKl~- 646 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF--ETPERVFVVMEKLH- 646 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee--cCCceEEEEehhhc-
Confidence 47999999999999 45689999999997654 333446788899999999999999997555 55677899999995
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC---CCeEEcccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN---MEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~ 1106 (1251)
|+..+++-.. +.+.+++....-+..||+.|+.|||.+ +|||+|+||+|||+.+. -.+||||||+|+.+.
T Consensus 647 GDMLEMILSs-----EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg 718 (888)
T KOG4236|consen 647 GDMLEMILSS-----EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG 718 (888)
T ss_pred chHHHHHHHh-----hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence 5777766543 267888888888999999999999999 99999999999999654 469999999999886
Q ss_pred cccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhh
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREE 1186 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1186 (1251)
+.. .....+||+.|.|||+++...|...-|+||.||++|--++|..||.....-.+... ..
T Consensus 719 Eks-----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ----NA---------- 779 (888)
T KOG4236|consen 719 EKS-----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ----NA---------- 779 (888)
T ss_pred hhh-----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhh----cc----------
Confidence 532 23347899999999999999999999999999999999999999975422211111 00
Q ss_pred hhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1187 LLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1187 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..+.| ..++........++|...++..-.+|-|+.+-+..
T Consensus 780 ---aFMyP-p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 780 ---AFMYP-PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ---ccccC-CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 11111 22345566678899999999999999988876543
No 384
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=3.2e-30 Score=288.09 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=191.7
Q ss_pred CCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC----chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCcee
Q 000859 947 NLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD----DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 1021 (1251)
+|...+.||+|+||.||++... .+..+++|+++... .......+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER--DAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC--CceE
Confidence 4777889999999999999654 34556666654211 222334577899999999999999999988544 4568
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|+||+++++|.+++.... .....+++.+++.++.|+++|++|||+. +++|+|+||+||++++ +.+|++|||.
T Consensus 79 lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~ 151 (260)
T cd08222 79 IITEYCEGRDLDCKLEELK---HTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGV 151 (260)
T ss_pred EEEEeCCCCCHHHHHHHHh---hcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCc
Confidence 9999999999999986532 1245689999999999999999999999 9999999999999975 5799999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
++....... ......|+..|+|||...+..++.++|+||+|+++|++++|..||.+... .......
T Consensus 152 ~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~----- 217 (260)
T cd08222 152 SRLLMGSCD----LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRI----- 217 (260)
T ss_pred eeecCCCcc----cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHH-----
Confidence 876533211 12224578899999998888899999999999999999999999864321 1111100
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.. . .....+...+.++.+++.+|++.+|++||++.|+++
T Consensus 218 ------~~-~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 218 ------VE-G--PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ------Hc-C--CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00 0 111112345667899999999999999999999986
No 385
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-31 Score=314.71 Aligned_cols=256 Identities=21% Similarity=0.238 Sum_probs=199.4
Q ss_pred HhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCc
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 1019 (1251)
-...+|.+.++||+|+||.|..++. .+++.||+|++.+-. .......|..|-.+|...+.+-||.++-+|. ++.+
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ--D~~~ 149 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ--DERY 149 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc--Cccc
Confidence 3456799999999999999999965 568899999986422 1223467888999999999999999987774 4667
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.|+|||||+||+|...+.+. ..++++-++-+...|+-||+-+|+. |+|||||||+|||+|..|++|++||
T Consensus 150 LYlVMdY~pGGDlltLlSk~-------~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKF-------DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred eEEEEecccCchHHHHHhhc-------CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 89999999999999999873 3788999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccc----c-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHH
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAY----S-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1174 (1251)
|.+..+..+ ........+|||.|.+||++. + +.|+..+|+||+||++|||+.|..||.+..- ++
T Consensus 220 GsClkm~~d---G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl--------ve 288 (1317)
T KOG0612|consen 220 GSCLKMDAD---GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL--------VE 288 (1317)
T ss_pred hhHHhcCCC---CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH--------HH
Confidence 998776433 233344568999999999876 2 5689999999999999999999999964421 12
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS---SRQVCDL 1230 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~~ 1230 (1251)
.+.. .+ +..-.-.+|.....+.+..++|.+.+. +|+.|-. ++++..+
T Consensus 289 TY~K----Im----~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 289 TYGK----IM----NHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred HHHH----Hh----chhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 1111 11 111011233333366677888887665 6888887 7776543
No 386
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=3.1e-30 Score=300.02 Aligned_cols=266 Identities=20% Similarity=0.306 Sum_probs=196.0
Q ss_pred hhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA---- 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---- 1017 (1251)
..++|+..+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567889999999999999999654 67899999986432 22234567789999999999999999987754332
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG 1097 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 1097 (1251)
...++|+||+ +++|.+++.. ..+++..+.+++.|+++|++|||+. +|+||||||+||++++++.+||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEc
Confidence 2368999999 6799998864 3589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
|||.+...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||.+....+. ........
T Consensus 161 dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~-~~~i~~~~ 232 (343)
T cd07851 161 DFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ-LKRIMNLV 232 (343)
T ss_pred ccccccccccc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhc
Confidence 99999765321 122457889999998765 4678999999999999999999999975432211 11111100
Q ss_pred Hhcc--------chhhhhhhcccCC---CCCCc-hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1177 MEMS--------GSAREELLDDQMK---PLLPG-EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1177 ~~~~--------~~~~~~~~~~~~~---~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.... ......+...... +.+.. ....+.++.+++.+|++.||++|||+++|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000 0000001110000 00000 0112567899999999999999999999975
No 387
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.5e-30 Score=298.18 Aligned_cols=270 Identities=22% Similarity=0.257 Sum_probs=192.5
Q ss_pred cCCCc-CceecccCCceEEEEE-ecCCcEEEEEEeccCCchh-------------hhHHHHHHHHHHHhccCCCccceec
Q 000859 946 NNLSD-EFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHL-------------LNKSFTREVKTLGRIRHRHLVKLMG 1010 (1251)
Q Consensus 946 ~~~~~-~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~niv~l~g 1010 (1251)
++|.. .+.||+|+||+||+|. ..+++.||||++....... ....+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 34543 4579999999999995 4478999999986443221 0124778999999999999999999
Q ss_pred eeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC
Q 000859 1011 HCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1011 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
++... ...++||||++ |+|.+++.. ...+++.....++.|++.|++|||+. +|+||||+|+||+++.
T Consensus 88 ~~~~~--~~~~lv~e~~~-~~l~~~l~~-------~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~ 154 (335)
T PTZ00024 88 VYVEG--DFINLVMDIMA-SDLKKVVDR-------KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINS 154 (335)
T ss_pred EEecC--CcEEEEEeccc-cCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECC
Confidence 88643 45789999997 699999875 34588999999999999999999999 9999999999999999
Q ss_pred CCCeEEcccccccccccccCC----------CCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCC
Q 000859 1091 NMEAHLGDFGLAKALVEDYNS----------NTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPT 1159 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~ 1159 (1251)
++.+|++|||.++........ .........++..|+|||.+.+. .++.++||||+||++|||++|+.||
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 234 (335)
T PTZ00024 155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLF 234 (335)
T ss_pred CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999765411100 01111123467889999988764 4689999999999999999999999
Q ss_pred CCccccchhHHHHHHHHHhccch-hhhhhhccc---CCCCCCc-----hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1160 DATFGVEMDMVRWVEMHMEMSGS-AREELLDDQ---MKPLLPG-----EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.+....+. .............. +........ .....+. ....+.++.+++.+|++.||++|||++|++.
T Consensus 235 ~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 235 PGENEIDQ-LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCCHHHH-HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 76543221 11111100000000 000000000 0000000 0113456889999999999999999999986
No 388
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=5.9e-30 Score=289.82 Aligned_cols=264 Identities=24% Similarity=0.353 Sum_probs=195.6
Q ss_pred CCcCceecccCCceEEEEEec-CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|+..+.||+|+||.||+|... +++.||+|++.... .....+.+..|++++++++|+|++++++++... ...++|+|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE--RKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--CceEEEec
Confidence 455678999999999999654 58999999997553 233346778899999999999999999988654 56799999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|++ ++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.++..
T Consensus 79 ~~~-~~l~~~i~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~ 148 (282)
T cd07829 79 YCD-MDLKKYLDKRP------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAF 148 (282)
T ss_pred CcC-cCHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccccc
Confidence 997 59999998642 4689999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc-chh
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS-GSA 1183 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 1183 (1251)
..... ......++..|+|||.+.+. .++.++||||+||++||+++|+.||......+. ........... ...
T Consensus 149 ~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 222 (282)
T cd07829 149 GIPLR----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ--LFKIFQILGTPTEES 222 (282)
T ss_pred CCCcc----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCcHHH
Confidence 32211 11223457789999998766 789999999999999999999999976532211 11110000000 000
Q ss_pred hhhh-----hcccCCCCCCc-----hHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1184 REEL-----LDDQMKPLLPG-----EECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1184 ~~~~-----~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
...+ .+......... ....+..+.+++.+||..||++||++++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 223 WPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000 00000000000 0012467899999999999999999999875
No 389
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=4.8e-30 Score=284.90 Aligned_cols=237 Identities=29% Similarity=0.355 Sum_probs=189.7
Q ss_pred ecccCCceEEEEEec-CCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCC
Q 000859 954 IGSGGSGTVYKAELA-NGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 954 lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
||+|+||.||++... +++.||+|++..... ....+.+..|++++++++||||+++++.+.. ....++||||++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT--EEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec--CCeeEEEEecCCCC
Confidence 699999999999654 589999999865432 2245678899999999999999999988754 45579999999999
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccC
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYN 1110 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 1110 (1251)
+|.+++... ..+++..+..++.|+++|+.|+|+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 79 ~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~- 147 (250)
T cd05123 79 ELFSHLSKE-------GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG- 147 (250)
T ss_pred cHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-
Confidence 999999763 3689999999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1111 SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1111 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
.......++..|+|||...+...+.++|+||||+++||+++|+.||......+ .... ...
T Consensus 148 ---~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----~~~~-----------~~~- 207 (250)
T cd05123 148 ---SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-----IYEK-----------ILK- 207 (250)
T ss_pred ---CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-----HHHH-----------Hhc-
Confidence 12233567889999999988889999999999999999999999996543211 0000 000
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQ 1226 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1226 (1251)
...+.+...+..+.+++.+||..||++||++++
T Consensus 208 ---~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 208 ---DPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111122223567889999999999999999954
No 390
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-30 Score=276.64 Aligned_cols=242 Identities=21% Similarity=0.289 Sum_probs=189.9
Q ss_pred hhcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCc
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD--HLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 1019 (1251)
...+|....+||+|+||.|..|..+ +.+-+|||+++++.- ....+--+.|-++++-. +-|.++++...|.. .+.
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT--mDR 424 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT--MDR 424 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh--hhh
Confidence 3456888899999999999999544 567799999875531 11223345677777766 57888898876643 456
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.|+||||+.||+|.-.++. -+.+.+..+.-+|..||-|+-+||++ +|+.||+|.+|||+|.+|.+||+||
T Consensus 425 LyFVMEyvnGGDLMyhiQQ-------~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQ-------VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred eeeEEEEecCchhhhHHHH-------hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeec
Confidence 7999999999999888876 46788888999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhc
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
|+++.-. ........++||+.|+|||++...+|+.++|+|||||++|||+.|++||++....+.-.
T Consensus 495 GmcKEni----~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~---------- 560 (683)
T KOG0696|consen 495 GMCKENI----FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ---------- 560 (683)
T ss_pred ccccccc----cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH----------
Confidence 9996421 22233345899999999999999999999999999999999999999999774432211
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCC
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQER 1221 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1221 (1251)
..+......+...+.+...+++..+.+.|.+|
T Consensus 561 ----------aI~ehnvsyPKslSkEAv~ickg~ltK~P~kR 592 (683)
T KOG0696|consen 561 ----------AIMEHNVSYPKSLSKEAVAICKGLLTKHPGKR 592 (683)
T ss_pred ----------HHHHccCcCcccccHHHHHHHHHHhhcCCccc
Confidence 11111222334455667789999999999998
No 391
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=1e-29 Score=317.63 Aligned_cols=146 Identities=29% Similarity=0.387 Sum_probs=127.7
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
++|.+.++||+|+||+||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~l 81 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS--ANNVYL 81 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--CCEEEE
Confidence 56888899999999999999654 68999999996432 23344678899999999999999999987754 345799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
||||+++++|.+++... +.+++..+++++.||+.||+|||+. +||||||||+|||++.++.+||+|||++
T Consensus 82 VmEy~~g~~L~~li~~~-------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls 151 (669)
T cd05610 82 VMEYLIGGDVKSLLHIY-------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLS 151 (669)
T ss_pred EEeCCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCC
Confidence 99999999999999753 4578899999999999999999999 9999999999999999999999999998
Q ss_pred c
Q 000859 1103 K 1103 (1251)
Q Consensus 1103 ~ 1103 (1251)
+
T Consensus 152 ~ 152 (669)
T cd05610 152 K 152 (669)
T ss_pred c
Confidence 6
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=252.38 Aligned_cols=207 Identities=27% Similarity=0.405 Sum_probs=170.2
Q ss_pred cCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+.......||+|++|.|-+-+ ..+|+..|+|.++..-..+..+...+|+.+..+. .+|.+|.|||.+..+ ...|+.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--gdvwIc 123 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--GDVWIC 123 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--ccEEEe
Confidence 334455679999999998884 4579999999998776667778888999986665 799999999977554 346999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
||.|+. +|..|-++ ....+..+++...-+||..+++||.|||++. .++|||+||+|||++.+|+||+||||.+-
T Consensus 124 ME~M~t-Sldkfy~~---v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRK---VLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred HHHhhh-hHHHHHHH---HHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence 999975 77776554 2334678899999999999999999999984 89999999999999999999999999987
Q ss_pred ccccccCCCCcccceeecccceecccccc----cCCCCCccceeehhHHHHHHhhCCCCCCCcccc
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAY----SLKATEKCDVYSMGIVLMELVSGKMPTDATFGV 1165 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~ 1165 (1251)
.+.+ ....+...|...|||||.+. ...|+.+|||||+|+++.||.+++.||+.....
T Consensus 198 ~L~d-----SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 198 YLVD-----SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred eehh-----hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 6533 23334457889999999875 347899999999999999999999999866443
No 393
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-30 Score=293.10 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=191.4
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
+..|.....+|.|+|+.|-++ ...+++..|||++.... .+..+|+.++... +||||+++.+.+.+ ....|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~--~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYED--GKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-----cccccccchhhhhcCCCcceeecceecC--Cceeee
Confidence 345666667999999999999 55678999999997552 2334677777666 79999999998844 556799
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee-cCCCCeEEccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL-DSNMEAHLGDFGL 1101 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~DfG~ 1101 (1251)
|||.+.+|-+.+.+...+ ... .++.+|+.+|+.|+.|||++ ||||||+||+|||+ ++.++++|+|||.
T Consensus 394 v~e~l~g~ell~ri~~~~-------~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~ 462 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP-------EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGF 462 (612)
T ss_pred eehhccccHHHHHHHhcc-------hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEech
Confidence 999999998888776642 233 67788999999999999999 99999999999999 6999999999999
Q ss_pred ccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccc
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSG 1181 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1181 (1251)
++...+. ....+-|..|.|||+.....|++++||||+|+++|+|++|+.||...... ..
T Consensus 463 a~~~~~~-------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~e------------- 521 (612)
T KOG0603|consen 463 WSELERS-------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IE------------- 521 (612)
T ss_pred hhhCchh-------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HH-------------
Confidence 9876443 11124588999999999999999999999999999999999999755332 11
Q ss_pred hhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1182 SAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
+......+.+ .+..+....+++.+|++.||.+||++.++...=+
T Consensus 522 -----i~~~i~~~~~--s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w 565 (612)
T KOG0603|consen 522 -----IHTRIQMPKF--SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPW 565 (612)
T ss_pred -----HHHhhcCCcc--ccccCHHHHHHHHHhccCChhhCcChhhhccCcc
Confidence 1111111111 1456677889999999999999999999976543
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=298.17 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=188.8
Q ss_pred CCcCceecccCCce-EEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEEEe
Q 000859 948 LSDEFIIGSGGSGT-VYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
|...+++|.|+.|+ ||+|.+. |++||||++... ......+|+..++.- +|||||+++ |.+.++...||+.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyy--c~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYY--CSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEE--eeccCCceEEEEeh
Confidence 34455789999997 8999885 899999998532 234567899999998 699999995 56677777899999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC---C--CCeEEcccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS---N--MEAHLGDFG 1100 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~--~~~kl~DfG 1100 (1251)
.|. .+|.++++...... ........+.+..|+++|++|||+. +|||||+||.||||+. + .+++|+|||
T Consensus 584 LC~-~sL~dlie~~~~d~---~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDV---EMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred Hhh-hhHHHHHhccccch---hhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccc
Confidence 996 59999998741111 1111144567889999999999998 9999999999999975 3 569999999
Q ss_pred cccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhc
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEM 1179 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 1179 (1251)
+++.+..+...-.. .....||.+|+|||.+....-+.++||||+||++|+.++ |.+||++....+.....-.
T Consensus 657 lsKkl~~~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~------ 729 (903)
T KOG1027|consen 657 LSKKLAGGKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN------ 729 (903)
T ss_pred cccccCCCcchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc------
Confidence 99988655433332 455789999999999999999999999999999999999 6999986643332222100
Q ss_pred cchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1180 SGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
... ..+.....+ +..++|.+|++.||..||+|.+|+.
T Consensus 730 -----~~L------~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 730 -----YTL------VHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -----cce------eeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000 001111111 6789999999999999999999964
No 395
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-30 Score=282.08 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=199.3
Q ss_pred CCcCceecccCCceEEEEEecCCc-EEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAELANGA-TVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~~~~-~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+.....||-|+||.|-.++..... .+|+|++++.. +....+.+..|-.||..++.|.||++|..|. +..+.|++|
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr--d~kyvYmLm 499 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR--DSKYVYMLM 499 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc--cchhhhhhH
Confidence 445557999999999999765433 48999887554 4456677889999999999999999999774 456779999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|-|-||.+|..|++ ++.++..+++-++.-+++|++|||++ +||.||+||+|.+++.+|-+|+.|||+|+.
T Consensus 500 EaClGGElWTiLrd-------Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKk 569 (732)
T KOG0614|consen 500 EACLGGELWTILRD-------RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKK 569 (732)
T ss_pred HhhcCchhhhhhhh-------cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHH
Confidence 99999999999987 56788889999999999999999999 999999999999999999999999999988
Q ss_pred cccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1105 LVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
+... .+.++ ++||+.|.|||++.....+.++|.||+|+++||+++|.+||.+..+........ ...
T Consensus 570 i~~g----~KTwT-FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL---------kGi 635 (732)
T KOG0614|consen 570 IGSG----RKTWT-FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL---------KGI 635 (732)
T ss_pred hccC----Cceee-ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH---------hhh
Confidence 7422 22222 799999999999999999999999999999999999999998876544322211 011
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPS-----SRQVCDL 1230 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~ 1230 (1251)
+.+ ..+...+....++|++.+..+|.+|.- +.||.++
T Consensus 636 d~i---------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 636 DKI---------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred hhh---------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 111 112224455678999999999999966 5555544
No 396
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=4.5e-29 Score=274.21 Aligned_cols=220 Identities=23% Similarity=0.269 Sum_probs=172.7
Q ss_pred cCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCChHHh
Q 000859 957 GGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDW 1035 (1251)
Q Consensus 957 G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~ 1035 (1251)
|.||.||++. ..+++.||+|++.... .+.+|...+....||||+++++++... ...++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSE--DSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecC--CeEEEEEecCCCCCHHHH
Confidence 8999999994 5678999999986432 233455555556799999999987643 457999999999999999
Q ss_pred hhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcc
Q 000859 1036 LHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTES 1115 (1251)
Q Consensus 1036 l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 1115 (1251)
+.+. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 76 l~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~------ 139 (237)
T cd05576 76 ISKF-------LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC------ 139 (237)
T ss_pred HHHh-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc------
Confidence 8763 3589999999999999999999999 99999999999999999999999999876543211
Q ss_pred cceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCC
Q 000859 1116 NTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPL 1195 (1251)
Q Consensus 1116 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1195 (1251)
....++..|+|||...+..++.++|+||+|+++|||++|+.|+...... ... . ..
T Consensus 140 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------------~~~----~--~~ 194 (237)
T cd05576 140 -DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------------INT----H--TT 194 (237)
T ss_pred -ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------------ccc----c--cc
Confidence 1134567899999998888999999999999999999999887532100 000 0 00
Q ss_pred CCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1196 LPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1196 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
...+...+..+.+++.+|++.||++||++.
T Consensus 195 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 195 LNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred cCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 011122345688999999999999999973
No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.1e-29 Score=269.62 Aligned_cols=134 Identities=24% Similarity=0.423 Sum_probs=115.6
Q ss_pred cCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-----C---CCccceeceeeecC
Q 000859 946 NNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-----H---RHLVKLMGHCCNKG 1016 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~g~~~~~~ 1016 (1251)
.+|.+.++||.|.|++||.| +..+.+.||+|+++. .+...+....|++++++++ | .+||+++++|...+
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS--AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS--AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh--hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 67889999999999999999 667789999999953 3445677889999999983 2 47999999998776
Q ss_pred CC--ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec
Q 000859 1017 AG--SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD 1089 (1251)
Q Consensus 1017 ~~--~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 1089 (1251)
+. ..++|+|+. |-+|..++.... .+.++...+++|++||+.||.|||.+| +|||.||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~-----YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSN-----YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhC-----CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 65 458899999 669999998754 567899999999999999999999997 999999999999993
No 398
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.7e-29 Score=279.02 Aligned_cols=219 Identities=23% Similarity=0.291 Sum_probs=177.0
Q ss_pred CHHHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhccCCCccceeceee
Q 000859 937 RWEDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRIRHRHLVKLMGHCC 1013 (1251)
Q Consensus 937 ~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 1013 (1251)
+.....-...-|...+.||-|+||+|..++. ++...||.|.+++.+ ..........|-.||+..+.+-||++|-.|.
T Consensus 620 RLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ 699 (1034)
T KOG0608|consen 620 RLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ 699 (1034)
T ss_pred HHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec
Confidence 3333333455677788899999999999954 456679999997554 2223456778999999999999999986664
Q ss_pred ecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC
Q 000859 1014 NKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME 1093 (1251)
Q Consensus 1014 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 1093 (1251)
+ .+..|+||||++||++-..|-+ .+.+.++.++-++..+..|+++.|.. |+|||||||+|||||.+|.
T Consensus 700 D--kdnLYFVMdYIPGGDmMSLLIr-------mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGH 767 (1034)
T KOG0608|consen 700 D--KDNLYFVMDYIPGGDMMSLLIR-------MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGH 767 (1034)
T ss_pred c--CCceEEEEeccCCccHHHHHHH-------hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCc
Confidence 4 4568999999999999999876 35688888888999999999999999 9999999999999999999
Q ss_pred eEEccccccccccccc----CCCC-----c-----------------------------ccceeecccceecccccccCC
Q 000859 1094 AHLGDFGLAKALVEDY----NSNT-----E-----------------------------SNTWFAGSYGYIAPEYAYSLK 1135 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~----~~~~-----~-----------------------------~~~~~~gt~~y~aPE~~~~~~ 1135 (1251)
+||+|||+++-+.=.. +... . .....+||+.|+|||++....
T Consensus 768 IKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g 847 (1034)
T KOG0608|consen 768 IKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG 847 (1034)
T ss_pred eeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC
Confidence 9999999987652110 0000 0 001257999999999999999
Q ss_pred CCCccceeehhHHHHHHhhCCCCCCCccccch
Q 000859 1136 ATEKCDVYSMGIVLMELVSGKMPTDATFGVEM 1167 (1251)
Q Consensus 1136 ~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~ 1167 (1251)
|+..+|+||.||++|||+.|++||-+..+.+.
T Consensus 848 ~~q~cdwws~gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 848 YTQLCDWWSVGVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred ccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence 99999999999999999999999987766654
No 399
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.8e-29 Score=248.23 Aligned_cols=265 Identities=18% Similarity=0.246 Sum_probs=199.3
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCcee
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~ 1021 (1251)
...+|++.+++|+|.+++||.|. ..+.+.++||+++. ...+.+.+|++|++.+. ||||+++++...+.....+.
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 45678889999999999999994 56788999999853 34578899999999996 99999999998887777789
Q ss_pred EEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-CCeEEcccc
Q 000859 1022 LIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-MEAHLGDFG 1100 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG 1100 (1251)
+|+||+++-+..... ..++..+++..+.+++.|+.|+|+. ||+|||+||.|||+|.. -..+++|+|
T Consensus 112 LiFE~v~n~Dfk~ly----------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY----------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred hHhhhhccccHHHHh----------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecc
Confidence 999999987766654 3477888999999999999999999 99999999999999865 469999999
Q ss_pred cccccccccCCCCcccceeecccceeccccccc-CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH----
Q 000859 1101 LAKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM---- 1175 (1251)
Q Consensus 1101 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~---- 1175 (1251)
+|..+.+.. .....+.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||--.....+++...+..
T Consensus 179 LAEFYHp~~-----eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~ 253 (338)
T KOG0668|consen 179 LAEFYHPGK-----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTD 253 (338)
T ss_pred hHhhcCCCc-----eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChH
Confidence 998764432 2333566788999998765 458999999999999999999999985443333333322211
Q ss_pred --------HHhccchhhhhhhcccCCCCC----Cc--hHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1176 --------HMEMSGSAREELLDDQMKPLL----PG--EECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1176 --------~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..-........++.+..+... +. .....++..+++.+.+..|-.+|||++|.+..
T Consensus 254 el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 254 ELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 110011111111211111111 00 01134778899999999999999999998753
No 400
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=4.2e-29 Score=303.66 Aligned_cols=269 Identities=17% Similarity=0.207 Sum_probs=170.0
Q ss_pred hhcCCCcCceecccCCceEEEEEec-C----CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceee----e
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA-N----GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCC----N 1014 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~----~ 1014 (1251)
..++|...+.||+|+||.||+|... + +..||||++...... +.+..| .++...+.+++.++..+. .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~---e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV---EIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh---HHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 3567899999999999999999664 4 689999997532211 111111 122222333333322211 1
Q ss_pred cCCCceeEEEeecCCCChHHhhhcCCCCcc-------------cCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC
Q 000859 1015 KGAGSNLLIYEYMENGSVWDWLHKQPVNIK-------------MRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDI 1081 (1251)
Q Consensus 1015 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 1081 (1251)
......++|+||+++++|.+++........ .........+..++.|++.||+|||++ +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 234557999999999999999975431100 011122345668999999999999999 9999999
Q ss_pred CCCCeeecC-CCCeEEcccccccccccccCCCCcccceeecccceecccccccC----------------------CCCC
Q 000859 1082 KSSNILLDS-NMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL----------------------KATE 1138 (1251)
Q Consensus 1082 kp~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ 1138 (1251)
||+|||++. ++.+||+|||+|+.+..... .......+|+.|+|||.+... .++.
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~---~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGIN---YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccc---cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999999986 68999999999976532211 122335789999999965322 2445
Q ss_pred ccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhh---cccCCC----CCCchHHHHHHHHHHHH
Q 000859 1139 KCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELL---DDQMKP----LLPGEECAAYQVLEIAL 1211 (1251)
Q Consensus 1139 ~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~l~~li~ 1211 (1251)
++||||+||++|||+++..|++.. ........... +.....+. .....+ .+...........+++.
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~~------~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~ 431 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDSN------LIQFNRQLKRN-DYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLK 431 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCchH------HHHHHHHHHhc-CCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHH
Confidence 679999999999999987775432 11111111000 00001110 000000 00001112234568999
Q ss_pred HccccCCCCCCCHHHHHHH
Q 000859 1212 QCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1212 ~cl~~dP~~RPs~~eil~~ 1230 (1251)
+|++.||++|||++|+++.
T Consensus 432 ~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 432 SMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHccCCcccCCCHHHHhCC
Confidence 9999999999999999874
No 401
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.6e-28 Score=286.05 Aligned_cols=274 Identities=16% Similarity=0.199 Sum_probs=184.6
Q ss_pred hhcCCCcCceecccCCceEEEEEe-----------------cCCcEEEEEEeccCCchh-------------hhHHHHHH
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-----------------ANGATVAVKKISCKDDHL-------------LNKSFTRE 993 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~E 993 (1251)
..++|++.++||+|+||+||+|.. .+++.||||++....... ..+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 366899999999999999999953 235689999986433211 11233457
Q ss_pred HHHHHhccCCC-----ccceeceeeecC------CCceeEEEeecCCCChHHhhhcCCCCc-----------------cc
Q 000859 994 VKTLGRIRHRH-----LVKLMGHCCNKG------AGSNLLIYEYMENGSVWDWLHKQPVNI-----------------KM 1045 (1251)
Q Consensus 994 ~~~l~~l~h~n-----iv~l~g~~~~~~------~~~~~lv~E~~~~gsL~~~l~~~~~~~-----------------~~ 1045 (1251)
+.++.+++|.+ +++++++|.... ....++||||+++|+|.++++...... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 77777776654 477888775421 234689999999999999997532110 01
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccce
Q 000859 1046 RKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGY 1125 (1251)
Q Consensus 1046 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y 1125 (1251)
...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++........ ......+|+.|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~g~~tp~Y 376 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF---NPLYGMLDPRY 376 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc---CccccCCCcce
Confidence 23457888999999999999999999 9999999999999999999999999999754322111 11112457899
Q ss_pred ecccccccCC--------------------C--CCccceeehhHHHHHHhhCCC-CCCCccccchhHHHHHHHHHhccch
Q 000859 1126 IAPEYAYSLK--------------------A--TEKCDVYSMGIVLMELVSGKM-PTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1126 ~aPE~~~~~~--------------------~--~~~sDiwSlGv~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
+|||.+.... + ..+.||||+||++|||++|.. ||............+.... ..
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~----~~ 452 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDL----NR 452 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchH----HH
Confidence 9999875322 1 234799999999999999875 6653321111111000000 00
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCC---CCCCCHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSP---QERPSSRQVCDL 1230 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~eil~~ 1230 (1251)
++. ... ....++..........+++.+++..+| .+|+|++|++++
T Consensus 453 ~r~-~~~--~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 453 WRM-YKG--QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HHh-hcc--cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000 000 011122223345678899999999876 689999999864
No 402
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=7.7e-28 Score=265.68 Aligned_cols=239 Identities=28% Similarity=0.411 Sum_probs=190.0
Q ss_pred CCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCChHHhh
Q 000859 958 GSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWL 1036 (1251)
Q Consensus 958 ~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l 1036 (1251)
+||.||+|... +++.||+|++.........+.+.+|++.+++++|+||+++++++... ...++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHHHHH
Confidence 58999999775 48999999997655443367899999999999999999999988654 4579999999999999999
Q ss_pred hcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCccc
Q 000859 1037 HKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESN 1116 (1251)
Q Consensus 1037 ~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 1116 (1251)
... ..+++..+..++.+++++++|||+. +++|+||+|+||+++.++.++++|||.+....... ..
T Consensus 79 ~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~ 143 (244)
T smart00220 79 KKR-------GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LL 143 (244)
T ss_pred Hhc-------cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----cc
Confidence 764 2388999999999999999999999 99999999999999999999999999997654321 22
Q ss_pred ceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCC
Q 000859 1117 TWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLL 1196 (1251)
Q Consensus 1117 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1196 (1251)
....++..|+|||...+..++.++||||+|+++|++++|..||......+. ..++ .. .......
T Consensus 144 ~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-~~~~---~~------------~~~~~~~ 207 (244)
T smart00220 144 TTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-LFKK---IG------------KPKPPFP 207 (244)
T ss_pred ccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHH---Hh------------ccCCCCc
Confidence 234678899999999888899999999999999999999999975311111 1111 00 0000100
Q ss_pred CchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1197 PGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1197 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
......+.++.+++.+|+..+|++||++.++++
T Consensus 208 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 208 PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 011114457889999999999999999999986
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-29 Score=253.57 Aligned_cols=268 Identities=22% Similarity=0.304 Sum_probs=196.5
Q ss_pred CCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCC---ceeE
Q 000859 948 LSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAG---SNLL 1022 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---~~~l 1022 (1251)
.+..+.||.|+||.||.+ +-++|+.||.|++..-. .-...+.+.+|++++..++|.|++..++...-.... ..|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344568999999999998 55789999999985322 334567889999999999999999988865433222 2478
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
++|.|. .+|...+-. ...++.+.+.-+.+||++|+.|||+. +|.||||||.|.+++++...||||||+|
T Consensus 135 ~TELmQ-SDLHKIIVS-------PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVS-------PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHH-hhhhheecc-------CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccc
Confidence 889885 477777654 45788899999999999999999999 9999999999999999999999999999
Q ss_pred cccccccCCCCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHH-------
Q 000859 1103 KALVEDYNSNTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVE------- 1174 (1251)
Q Consensus 1103 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~------- 1174 (1251)
+.-..+. ....+..+-|..|+|||.+.+. .|+.+.||||.||++.|++.++.-|....+.+ ..+.+.
T Consensus 204 Rvee~d~---~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq--QL~lItdLLGTPs 278 (449)
T KOG0664|consen 204 RTWDQRD---RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE--QLQMIIDLLGTPS 278 (449)
T ss_pred cccchhh---hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH--HHHHHHHHhCCCc
Confidence 8643322 2223345678999999999875 58999999999999999999999997664432 111111
Q ss_pred --HHHhccchhhhhhhcccCCC-CC------CchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1175 --MHMEMSGSAREELLDDQMKP-LL------PGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1175 --~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
.+....+..+..++....++ .+ ........+...+...++..||++|.+.++.+...
T Consensus 279 ~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 279 QEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 11122222333333322221 11 11112334456788889999999999999887654
No 404
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=251.95 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=191.1
Q ss_pred hhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCC--chhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCc
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKD--DHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGS 1019 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 1019 (1251)
...+|+..++||+|+|++|..++. ++.+.+|+|++++.- +.+...=...|-.+..+. +||.+|.+...|.. +..
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt--esr 325 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT--ESR 325 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc--cce
Confidence 356788999999999999999954 467889999987542 222333345677777666 79999999987744 445
Q ss_pred eeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccc
Q 000859 1020 NLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDF 1099 (1251)
Q Consensus 1020 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 1099 (1251)
.++|.||++||+|.-.+++ .+.++++.++-+...|.-|+.|||++ ||+.||+|..||++|+.|.+|++|+
T Consensus 326 lffvieyv~ggdlmfhmqr-------qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQR-------QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred EEEEEEEecCcceeeehhh-------hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeeccc
Confidence 7899999999999877766 46799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCC--ccccchhHHHHHHHHH
Q 000859 1100 GLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDA--TFGVEMDMVRWVEMHM 1177 (1251)
Q Consensus 1100 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~--~~~~~~~~~~~~~~~~ 1177 (1251)
|+++.-.. .....+.++||+.|.|||++++..|...+|.|++||+++||+.|+.||+- +.+.+....++.-..
T Consensus 396 gmcke~l~----~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv- 470 (593)
T KOG0695|consen 396 GMCKEGLG----PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV- 470 (593)
T ss_pred chhhcCCC----CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH-
Confidence 99865322 22334458999999999999999999999999999999999999999973 333333332222111
Q ss_pred hccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCC
Q 000859 1178 EMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERP 1222 (1251)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1222 (1251)
++....+ .+...+.....+++.-+++||.+|.
T Consensus 471 ---------ilekqir----iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 471 ---------ILEKQIR----IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---------Hhhhccc----ccceeehhhHHHHHHhhcCCcHHhc
Confidence 1111111 1111223455788889999999984
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=5.3e-28 Score=267.48 Aligned_cols=207 Identities=25% Similarity=0.326 Sum_probs=171.0
Q ss_pred CCHHHHHHhhcCCCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhh-----hHHHHHHHHHHHhcc---CCC
Q 000859 936 FRWEDIMGATNNLSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLL-----NKSFTREVKTLGRIR---HRH 1004 (1251)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~-----~~~~~~E~~~l~~l~---h~n 1004 (1251)
..|+-......+|...+.+|+|+||.|+.|.+ ++...|+||.+.+.+- ..+ .-....|++||..++ |+|
T Consensus 551 ~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N 630 (772)
T KOG1152|consen 551 IGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN 630 (772)
T ss_pred ccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc
Confidence 34444445566789999999999999999954 4567899999865431 111 123457999999997 999
Q ss_pred ccceeceeeecCCCceeEEEeecCCC-ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 000859 1005 LVKLMGHCCNKGAGSNLLIYEYMENG-SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKS 1083 (1251)
Q Consensus 1005 iv~l~g~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 1083 (1251)
|++++++|.+ ++.+|++||....| +|.+|+..+ ..+++.++..|+.||+.|+++||+. +|||||||-
T Consensus 631 IlKlLdfFEd--dd~yyl~te~hg~gIDLFd~IE~k-------p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikd 698 (772)
T KOG1152|consen 631 ILKLLDFFED--DDYYYLETEVHGEGIDLFDFIEFK-------PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKD 698 (772)
T ss_pred hhhhhheeec--CCeeEEEecCCCCCcchhhhhhcc-------CccchHHHHHHHHHHHhcccccccc---Cceeccccc
Confidence 9999999854 56679999987654 999999874 5689999999999999999999999 999999999
Q ss_pred CCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCC-CCccceeehhHHHHHHhhCCCCCC
Q 000859 1084 SNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKA-TEKCDVYSMGIVLMELVSGKMPTD 1160 (1251)
Q Consensus 1084 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGv~l~el~tg~~p~~ 1160 (1251)
+||.++.+|-+|++|||.|... ..++-..++||..|.|||++.+..| +..-|||++|+++|.++....||.
T Consensus 699 envivd~~g~~klidfgsaa~~------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 699 ENVIVDSNGFVKLIDFGSAAYT------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccEEEecCCeEEEeeccchhhh------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999999999998543 2334445899999999999999887 456899999999999999998874
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=5.4e-27 Score=243.46 Aligned_cols=262 Identities=24% Similarity=0.334 Sum_probs=193.5
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCC----C
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA----G 1018 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~ 1018 (1251)
..+|...+.+|.|+- .|..| +.-.+++||+|++.... .....+...+|...+..+.|+||++++.++.-... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 345777778999988 56666 55568999999986542 23345677899999999999999999998864321 2
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
..|+|||+|+ .+|...+.. .++=+++..+..|++.|+.|||+. +|+|||+||+||++..+..+||.|
T Consensus 95 e~y~v~e~m~-~nl~~vi~~---------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~d 161 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM---------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILD 161 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH---------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeecc
Confidence 3589999996 588887763 245577889999999999999999 999999999999999999999999
Q ss_pred cccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHh
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHME 1178 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 1178 (1251)
||+|+.-..+ -..+.++.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.. ...+|......
T Consensus 162 fg~ar~e~~~-----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d----~idQ~~ki~~~ 232 (369)
T KOG0665|consen 162 FGLARTEDTD-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD----HIDQWNKIIEQ 232 (369)
T ss_pred chhhcccCcc-----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch----HHHHHHHHHHH
Confidence 9999764222 23445788999999999999889999999999999999999999987432 22223221111
Q ss_pred ccch--------------------------hhhhhhc-ccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1179 MSGS--------------------------AREELLD-DQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1179 ~~~~--------------------------~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.+. ...+.+. ..+......+........+++.+|+..||++|.|++++++.
T Consensus 233 -lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 233 -LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred -hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 0011111 11111111222234457899999999999999999999864
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3e-27 Score=266.06 Aligned_cols=253 Identities=25% Similarity=0.348 Sum_probs=199.7
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|+....+|.|.||.|||| +.++++..|||+++-.... ..+...+|+-+++.++|||||.++|.|... ...|++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d-d~~~iqqei~~~~dc~h~nivay~gsylr~--dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD-DFSGIQQEIGMLRDCRHPNIVAYFGSYLRR--DKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc-cccccccceeeeecCCCcChHHHHhhhhhh--cCcEEE
Confidence 456888889999999999999 5668999999999765543 456678899999999999999999987543 446999
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+.+|+|++.-+. .+.+++.++..+++...+|++|||+. +-+|||||-.||++++.|.+|++|||.+.
T Consensus 91 MEycgggslQdiy~~-------TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsa 160 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV-------TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSA 160 (829)
T ss_pred EEecCCCcccceeee-------cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchh
Confidence 999999999998765 57899999999999999999999999 88999999999999999999999999986
Q ss_pred ccccccCCCCcccceeecccceeccccc---ccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhcc
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYA---YSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMS 1180 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 1180 (1251)
.+... ......+.||+.|||||+. +.+.|...+|||+.|+...|+---++|..+..+... ..-+.
T Consensus 161 qitat----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~----l~LmT---- 228 (829)
T KOG0576|consen 161 QITAT----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA----LFLMT---- 228 (829)
T ss_pred hhhhh----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH----HHHhh----
Confidence 65432 2223347899999999975 356799999999999999999887777443322110 00000
Q ss_pred chhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1181 GSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
....-.+.+.........+.++++.|+.++|++||+++.++.
T Consensus 229 -------kS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 229 -------KSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -------ccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 000111223333446677899999999999999999987654
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-26 Score=233.48 Aligned_cols=249 Identities=18% Similarity=0.296 Sum_probs=186.5
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
+.|.+.+.+|+|.||.+-.++++ +.+.+|+|.+... ....++|.+|..---.+ .|.||+.-|++..+.. +.++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p--~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~-d~YvF~ 100 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP--QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS-DAYVFV 100 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc--hhhHHHHHHHhccceeeccchhhhHHHHHHhhcC-ceEEEe
Confidence 45888889999999999999665 5788999998544 34568899998765555 6999999998655543 357889
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee-c-CCCCeEEccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL-D-SNMEAHLGDFGL 1101 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill-~-~~~~~kl~DfG~ 1101 (1251)
+||++.|+|.+-+.. ..+.+....+++.|+++|+.|+|++ .+||||||.+|||+ + +..+||+||||.
T Consensus 101 qE~aP~gdL~snv~~--------~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA--------AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred eccCccchhhhhcCc--------ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccc
Confidence 999999999887754 3467888899999999999999999 99999999999999 3 345799999999
Q ss_pred ccccccccCCCCcccceeecccceeccccccc-----CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAYS-----LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
.+........ ..-+..|.|||.... ....+.+|||.||+++|.++||+.||......+..+.+|....
T Consensus 170 t~k~g~tV~~-------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~ 242 (378)
T KOG1345|consen 170 TRKVGTTVKY-------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL 242 (378)
T ss_pred ccccCceehh-------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh
Confidence 8765332211 223557899996542 2356789999999999999999999987666565666665544
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQV 1227 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 1227 (1251)
.+... ...+. -....+...++.++-+..+|++|=-..++
T Consensus 243 ~rk~~-----~~P~~-------F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 243 KRKNP-----ALPKK-------FNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred cccCc-----cCchh-------hcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 32111 11111 11234567789999999999999444333
No 409
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=5.3e-26 Score=248.33 Aligned_cols=264 Identities=27% Similarity=0.319 Sum_probs=198.1
Q ss_pred hhcCCCcCceecccCCceEEEEE-ecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc------CCCccceeceeeecC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAE-LANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR------HRHLVKLMGHCCNKG 1016 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~g~~~~~~ 1016 (1251)
...+|.+....|+|-|++|.+|. ..-|..||||++... +...+.=.+|++||+++. --|+++++.+|...
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk- 506 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK- 506 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc-
Confidence 45678888889999999999994 445889999999643 344556678999999994 35899999887543
Q ss_pred CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-CCeE
Q 000859 1017 AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-MEAH 1095 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~k 1095 (1251)
...|+|||-+. -+|.+.|++... .-.+...++..++.|+.-||..|... +|+|.||||.||||++. ..+|
T Consensus 507 -nHLClVFE~Ls-lNLRevLKKyG~----nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLK 577 (752)
T KOG0670|consen 507 -NHLCLVFEPLS-LNLREVLKKYGR----NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILK 577 (752)
T ss_pred -ceeEEEehhhh-chHHHHHHHhCc----ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceee
Confidence 45799999985 589999987532 34577889999999999999999999 99999999999999865 5689
Q ss_pred EcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1096 LGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
|||||.|....+... +.+.-+..|.|||++.+.+|+...|+||.||.+||+.||+..|.+..+..+ . ..
T Consensus 578 LCDfGSA~~~~enei------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M--L---rl 646 (752)
T KOG0670|consen 578 LCDFGSASFASENEI------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM--L---RL 646 (752)
T ss_pred eccCccccccccccc------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH--H---HH
Confidence 999999976543211 223457889999999999999999999999999999999999987755332 2 22
Q ss_pred HHhccchhhhhhh------ccc--------------------------CCC------------CCCc-hHHHHHHHHHHH
Q 000859 1176 HMEMSGSAREELL------DDQ--------------------------MKP------------LLPG-EECAAYQVLEIA 1210 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~------~~~--------------------------~~~------------~~~~-~~~~~~~l~~li 1210 (1251)
+++..+.....++ ++. .+| .++. .......+.+|+
T Consensus 647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL 726 (752)
T KOG0670|consen 647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL 726 (752)
T ss_pred HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH
Confidence 2222222111111 100 001 0111 112446688999
Q ss_pred HHccccCCCCCCCHHHHHHH
Q 000859 1211 LQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1211 ~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..|+..||++|.|..+++..
T Consensus 727 dkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 727 DKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHhccChhhcCCHHHHhcC
Confidence 99999999999999998753
No 410
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=6e-25 Score=236.72 Aligned_cols=211 Identities=36% Similarity=0.594 Sum_probs=180.3
Q ss_pred ecccCCceEEEEEecC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCCh
Q 000859 954 IGSGGSGTVYKAELAN-GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSV 1032 (1251)
Q Consensus 954 lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL 1032 (1251)
||+|++|.||++...+ ++++++|++.........+.+.+|++.++.+.|++|+++++++... ...++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCCCcH
Confidence 6899999999997654 8999999997655433457889999999999999999999988654 457999999999999
Q ss_pred HHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCeEEcccccccccccccCC
Q 000859 1033 WDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEAHLGDFGLAKALVEDYNS 1111 (1251)
Q Consensus 1033 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~~~~~ 1111 (1251)
.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~- 148 (215)
T cd00180 79 KDLLKENE------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS- 148 (215)
T ss_pred HHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-
Confidence 99987631 4688999999999999999999999 9999999999999999 89999999999976532211
Q ss_pred CCcccceeecccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcc
Q 000859 1112 NTESNTWFAGSYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDD 1190 (1251)
Q Consensus 1112 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1251)
......+...|++||..... .++.++|+|++|++++++
T Consensus 149 ---~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------- 187 (215)
T cd00180 149 ---LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------- 187 (215)
T ss_pred ---hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------
Confidence 12224567899999998877 888999999999999998
Q ss_pred cCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1191 QMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1191 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
..+.+++..|++.+|++||+++++++.
T Consensus 188 -------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 347789999999999999999999864
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-27 Score=250.71 Aligned_cols=401 Identities=23% Similarity=0.277 Sum_probs=238.6
Q ss_pred ccceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccC-ccccCcccccccccccchhhhh
Q 000859 264 QLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSN-NNISGSIPRRICTNATSLEHLI 342 (1251)
Q Consensus 264 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~i~~~~~~~l~~L~~L~ 342 (1251)
.-.+++|..|+|+.+.+.+|..+++|+.||||+|.|+.+-|++|.++.+|.+|-+-+ |+|+ .+|+..|.++.+|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHh
Confidence 344555555556555555566666666666666666655556666665555554333 5555 56666666666666666
Q ss_pred ccchhcccCCCcCccCCCCCceEEccCCcccCCccc-cccccccccEEEeeccccc------------cccccccccccc
Q 000859 343 LAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPV-ELFQLVALTHLYLHNNSLV------------GSISPFVANLSN 409 (1251)
Q Consensus 343 L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~n~l~------------~~~~~~~~~l~~ 409 (1251)
+.-|++.......|..+++|..|.+..|.+. .++. .+..+..++.+.+..|.+. ...+..++...-
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 6666666665666666666666666666666 4444 4555666666666666521 112233444444
Q ss_pred ccEEEecccccCCCCchhhhcc-cccchhhcccCccccccc-CCcCCCCccceEeccCCcccCCCCCcccccCCCcEEec
Q 000859 410 LQELALYHNNFQGSLPREIGML-VKLELLYLYDNHLSGQIP-SEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHL 487 (1251)
Q Consensus 410 L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 487 (1251)
..-..+.++++..+.+..|... ..+..=..+.+...+..| ..|..+++|++|+|++|+|+.+-+.+|.++..+++|+|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 5555666666665555554332 222221222332333333 46788888888888888888888888888888888888
Q ss_pred cCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCC-chhhhhhcCCCeeecccccccc
Q 000859 488 RQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNL-PGSLINLRNLTRINFSKNRLNG 566 (1251)
Q Consensus 488 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~l~~N~l~~ 566 (1251)
..|+|...-...|.++..|+.|+|++|+|+...|.+|..+.+|.+|+|-.|.+-..- -.++... |.++.-.+
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~W-------lr~~~~~~ 378 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEW-------LRKKSVVG 378 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHH-------HhhCCCCC
Confidence 888888766777888888888888888888888888888888888888877765210 0111110 01111001
Q ss_pred cccccccCccceeeecccCccc---cCCCCCCC---------CcccCc-eeecccCccccccCcccccccccceEEccCC
Q 000859 567 RIATLCSSHSFLSFDVTNNEFD---HEIPPQLG---------NSPSLE-RLRLGNNKFIGKIPWTFGKIRELSLLDLSGN 633 (1251)
Q Consensus 567 ~~~~l~~~~~l~~l~l~~n~l~---~~~p~~l~---------~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 633 (1251)
.++ ......+..++++.+.+. ..-|++.+ ..+-+. ....+++.++ .+|..+- ..-+.|.+.+|
T Consensus 379 ~~~-Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn 454 (498)
T KOG4237|consen 379 NPR-CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGN 454 (498)
T ss_pred CCC-CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccc
Confidence 000 011112333344333322 22222222 122333 2334444444 4444332 24567888899
Q ss_pred cccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCc
Q 000859 634 SLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFN 681 (1251)
Q Consensus 634 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 681 (1251)
.++ .+|.+ .+++| .+|+++|+++..-...|.++++|..|-||+|
T Consensus 455 ~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 455 AIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 998 67777 66788 8999999998766777889999999999887
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=3.8e-25 Score=239.17 Aligned_cols=272 Identities=24% Similarity=0.312 Sum_probs=194.8
Q ss_pred HHHhhcCCCcCceecccCCceEEEEEec----CCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeec
Q 000859 941 IMGATNNLSDEFIIGSGGSGTVYKAELA----NGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 941 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 1015 (1251)
.....+.|..+++||+|.|++||+|... ..+.||+|.+...... ..+..|+++|..+ .+.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~r-- 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFR-- 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhc--
Confidence 3345667888999999999999999432 4678999999755443 5688999999999 5999999998764
Q ss_pred CCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-CCCe
Q 000859 1016 GAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS-NMEA 1094 (1251)
Q Consensus 1016 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~ 1094 (1251)
..+...+|+||++..+..++... ++..++..+++.+..||+|+|.. |||||||||.|++.+. .+.-
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~----------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg 172 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS----------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRG 172 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc----------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCc
Confidence 45567999999999988888754 67889999999999999999999 9999999999999974 5778
Q ss_pred EEccccccccccccc------------CCC-------------------------Cc---ccceeecccceecccccc-c
Q 000859 1095 HLGDFGLAKALVEDY------------NSN-------------------------TE---SNTWFAGSYGYIAPEYAY-S 1133 (1251)
Q Consensus 1095 kl~DfG~a~~~~~~~------------~~~-------------------------~~---~~~~~~gt~~y~aPE~~~-~ 1133 (1251)
.|+|||+|..+.... ... .. .....+||++|+|||++. .
T Consensus 173 ~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~ 252 (418)
T KOG1167|consen 173 VLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC 252 (418)
T ss_pred eEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc
Confidence 999999998321100 000 00 011257999999999876 4
Q ss_pred CCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHH--------hccch-------h---hhhh------hc
Q 000859 1134 LKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHM--------EMSGS-------A---REEL------LD 1189 (1251)
Q Consensus 1134 ~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~~~-------~---~~~~------~~ 1189 (1251)
...+.++||||.||++.-+++++.||-.....-....+.+.... ...+. . ..+. ++
T Consensus 253 ~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~ 332 (418)
T KOG1167|consen 253 PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLH 332 (418)
T ss_pred cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccC
Confidence 56899999999999999999999998544332222222111100 00011 0 0000 00
Q ss_pred -ccCCC-------CCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1190 -DQMKP-------LLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1190 -~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
....+ .....+..+..+++++.+|+..||.+|.|+++.++.
T Consensus 333 ~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 333 IESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred hhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 00000 001112244578999999999999999999998764
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=4.9e-27 Score=249.40 Aligned_cols=277 Identities=21% Similarity=0.234 Sum_probs=197.5
Q ss_pred cccEEEccCCCCCCCcCccccccCcccEEecccccccCCCCcccCCCccccEEEecc-CCCCCCCCCccccccccccccc
Q 000859 96 SLIHLDLSSNSLTGPIPTALSNLSSLESLLLFSNQLAGTIPTQLGSLTSLRVMRIGD-NWLSGSIPTSFGNLVNLGTLGL 174 (1251)
Q Consensus 96 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L 174 (1251)
.-+.++|..|+|+...|.+|+.+++|+.||||+|+|+..-|++|..|.+|..|-+.+ |+|+...-..|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 446788888888877777888888888888888888888888888888877776665 8888666678888888888888
Q ss_pred ccCCCCCCCCCCcCcccccceeeeccccccCCCCcccCCCCCCceeecccccc------------CCCchhhhcccccCc
Q 000859 175 ASCSLSGPIPPQFGQLSQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENNL------------NGSIPAALGRLQNLQ 242 (1251)
Q Consensus 175 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l------------~~~~p~~~~~l~~L~ 242 (1251)
.-|++.-...+.|..|++|..|.+.+|.+...--..|..+.+++.+.+..|.+ ....|..++++.-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 88888888888888888888888888888744445888888888888888873 234455556666666
Q ss_pred eeeccCccCCCCCCccccCC-CccceeeccCccccCcCC-cccccCCCccEEEeccccccCCCCCccccccceEEEEccC
Q 000859 243 LLNLGNNSLSGEIPSELGEL-SQLGYLNLMGNRLEGAIP-RSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSN 320 (1251)
Q Consensus 243 ~L~L~~N~l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 320 (1251)
-..+.++.+..+.+..|... ..+..=..+.+...++.| ..|.++++|+.|+|++|+++.+.+.+|.++..+++|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 66666666654444443322 122111122222333333 4577788888888888888877777788888888888888
Q ss_pred ccccCcccccccccccchhhhhccchhcccCCCcCccCCCCCceEEccCCccc
Q 000859 321 NNISGSIPRRICTNATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLN 373 (1251)
Q Consensus 321 N~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 373 (1251)
|++. .+...+|.++..|+.|+|.+|+|+...|.+|..+..|.+|.|-.|.+.
T Consensus 308 N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 308 NKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred chHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 8776 666666666666666666666666666666666666666666666554
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.91 E-value=5.1e-24 Score=232.16 Aligned_cols=200 Identities=32% Similarity=0.465 Sum_probs=168.5
Q ss_pred CCcCceecccCCceEEEEEecC-CcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEee
Q 000859 948 LSDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEY 1026 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~ 1026 (1251)
|+..+.||+|++|.||+|...+ ++.||+|.+.........+.+.+|++.+++++|+|++++++++... ...++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP--EPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC--CceEEEEec
Confidence 4566789999999999997654 8999999997554332467889999999999999999999987543 457899999
Q ss_pred cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1027 MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1027 ~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+++++|.+++.... ..+++.....++.+++.+++|||+. +++|+|++|+||+++.++.++|+|||.+....
T Consensus 79 ~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~ 149 (225)
T smart00221 79 CEGGDLFDYLRKKG------GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIH 149 (225)
T ss_pred cCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEec
Confidence 99999999998642 1178999999999999999999999 99999999999999999999999999987764
Q ss_pred cccCCCCcccceeecccceeccccc-ccCCCCCccceeehhHHHHHHhhCCCCCCC
Q 000859 1107 EDYNSNTESNTWFAGSYGYIAPEYA-YSLKATEKCDVYSMGIVLMELVSGKMPTDA 1161 (1251)
Q Consensus 1107 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlGv~l~el~tg~~p~~~ 1161 (1251)
... ........++..|++||.. ....++.++|+|++|++++||++|+.||..
T Consensus 150 ~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 150 RDL---AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred Ccc---cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 332 0122234678899999988 666778899999999999999999999965
No 415
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=4.4e-25 Score=222.45 Aligned_cols=247 Identities=20% Similarity=0.362 Sum_probs=190.3
Q ss_pred CceecccCCceEEEEEecCCcEEEEEEeccCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCC
Q 000859 951 EFIIGSGGSGTVYKAELANGATVAVKKISCKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMEN 1029 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~ 1029 (1251)
..+|.+...|+.|+|+|+ |..+++|++.... .....++|..|.-.++.+.||||++++|.|.. +....++..||+.
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns--ppnlv~isq~mp~ 271 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS--PPNLVIISQYMPF 271 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC--CCCceEeeeeccc
Confidence 346889999999999997 5667777775433 33455789999999999999999999999954 4567899999999
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEc--cccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLG--DFGLAKALVE 1107 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~--DfG~a~~~~~ 1107 (1251)
|+|+..+++.. .-.++-.+++++|.++|+||+|||+. .|-|.---+....|++|++.+++|+ |--++-.
T Consensus 272 gslynvlhe~t-----~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq--- 342 (448)
T KOG0195|consen 272 GSLYNVLHEQT-----SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--- 342 (448)
T ss_pred hHHHHHHhcCc-----cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee---
Confidence 99999999864 33456678899999999999999996 3345555788999999999998875 3222210
Q ss_pred ccCCCCcccceeecccceecccccccCCCC---CccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKAT---EKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAR 1184 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1184 (1251)
. ....-.+.||+||.+...+.+ +++|+|||++++||+.|+..||.+..+.+...+...+.
T Consensus 343 ----e----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg--------- 405 (448)
T KOG0195|consen 343 ----E----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG--------- 405 (448)
T ss_pred ----c----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc---------
Confidence 0 112336889999998866543 57999999999999999999999887766654432221
Q ss_pred hhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 000859 1185 EELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~ 1235 (1251)
++... +...+..+.++|.-|+++||.+||.+..|+-.|+++.
T Consensus 406 -------lrv~i--ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 -------LRVHI--PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -------ccccC--CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11222 2224556788999999999999999999999998764
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=7.2e-23 Score=270.69 Aligned_cols=346 Identities=21% Similarity=0.281 Sum_probs=207.2
Q ss_pred ccccccCcccEEeccccc------ccCCCCcccCCCc-cccEEEeccCCCCCCCCCcccccccccccccccCCCCCCCCC
Q 000859 113 TALSNLSSLESLLLFSNQ------LAGTIPTQLGSLT-SLRVMRIGDNWLSGSIPTSFGNLVNLGTLGLASCSLSGPIPP 185 (1251)
Q Consensus 113 ~~l~~l~~L~~L~L~~n~------l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 185 (1251)
.+|.++.+|+.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..| ...+|++|+|.+|.+. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 345555666666554432 2223455555543 4666666666554 555555 3456666666666654 3455
Q ss_pred CcCcccccceeeeccccccCCCCcccCCCCCCceeeccccccCCCchhhhcccccCceeeccCccCCCCCCccccCCCcc
Q 000859 186 QFGQLSQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENNLNGSIPAALGRLQNLQLLNLGNNSLSGEIPSELGELSQL 265 (1251)
Q Consensus 186 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 265 (1251)
.+..+++|++|+|++|.....+|. ++.+++|+.|++++|.....+|..++++++|+.|++++|..-..+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 555666666666665544444443 5556666666666665555666666666666666666654333455444 56666
Q ss_pred ceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccccCcccccccccccchhhhhccc
Q 000859 266 GYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNISGSIPRRICTNATSLEHLILAE 345 (1251)
Q Consensus 266 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~L~~ 345 (1251)
++|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|++|++.++... .+...
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~-~l~~~--------------- 765 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSE-KLWER--------------- 765 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchh-hcccc---------------
Confidence 66666666544344432 345666666666665 344433 4556666666553321 11100
Q ss_pred hhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeecccccccccccccccccccEEEecccccCCCCc
Q 000859 346 IQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGSISPFVANLSNLQELALYHNNFQGSLP 425 (1251)
Q Consensus 346 n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 425 (1251)
+....+..+...++|+.|+|++|...+.+|..+.++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|
T Consensus 766 --~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p 842 (1153)
T PLN03210 766 --VQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842 (1153)
T ss_pred --ccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccc
Confidence 000111112234567777777776666677777777777777777765444445444 67788888888876544555
Q ss_pred hhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCc
Q 000859 426 REIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNE 491 (1251)
Q Consensus 426 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 491 (1251)
.. ..+|++|+|++|.++ .+|.++..+++|+.|++++|+--..+|..+..+++|+.|++++|.
T Consensus 843 ~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 843 DI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 42 357888888888887 678888889999999998854333677788888899988888763
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=4e-23 Score=273.09 Aligned_cols=306 Identities=23% Similarity=0.290 Sum_probs=204.7
Q ss_pred CCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCeeecccccccccccccccCccceeeecccC
Q 000859 506 LIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTNN 585 (1251)
Q Consensus 506 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~n 585 (1251)
|+.|++.+|.++ .+|..| ...+|++|+|++|.+. .++..+..+++|+.|+|++|..-...+.+....+|+.|++++|
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c 667 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDC 667 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCC
Confidence 444555444444 333333 2344455555555444 2344444455555555554432222233444445555555555
Q ss_pred ccccCCCCCCCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCcc
Q 000859 586 EFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPS 665 (1251)
Q Consensus 586 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 665 (1251)
.....+|..+.++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|++++|.++ .+|.
T Consensus 668 ~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~ 742 (1153)
T PLN03210 668 SSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPS 742 (1153)
T ss_pred CCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccc
Confidence 4445677788888888888888865555666654 6788888888888665555543 467888888888887 5565
Q ss_pred ccCCCcccccccccCcccc-------CCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcc
Q 000859 666 WLGTLPQLGELKLSFNQFV-------GFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPA 738 (1251)
Q Consensus 666 ~~~~l~~L~~L~l~~N~l~-------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 738 (1251)
.+ .+++|++|++.++... ...|......++|+.|+|++|...+.+|..++.+++|+.|++++|...+.+|..
T Consensus 743 ~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~ 821 (1153)
T PLN03210 743 NL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTG 821 (1153)
T ss_pred cc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCC
Confidence 55 5778888888764322 112222334568899999998877788988999999999999987544467777
Q ss_pred cccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccC-CccccCCchhhhhccC
Q 000859 739 IGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSH-NQLVGELPSQLGEMSS 817 (1251)
Q Consensus 739 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~ 817 (1251)
+ .+++|+.|++++|..-..+|.... +++ .|+|++|+|+ .+|.++..+++|+.|+|++ |+|+ .+|..+..+++
T Consensus 822 ~-~L~sL~~L~Ls~c~~L~~~p~~~~---nL~-~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~ 894 (1153)
T PLN03210 822 I-NLESLESLDLSGCSRLRTFPDIST---NIS-DLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKH 894 (1153)
T ss_pred C-CccccCEEECCCCCcccccccccc---ccC-EeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccC
Confidence 6 688899999998765555665433 443 3689999998 7898899999999999988 5566 68888888899
Q ss_pred CCcEeecccc
Q 000859 818 LGKLNLSYND 827 (1251)
Q Consensus 818 L~~L~l~~N~ 827 (1251)
|+.+++++++
T Consensus 895 L~~L~l~~C~ 904 (1153)
T PLN03210 895 LETVDFSDCG 904 (1153)
T ss_pred CCeeecCCCc
Confidence 9999988875
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=3.8e-23 Score=251.94 Aligned_cols=268 Identities=29% Similarity=0.395 Sum_probs=143.1
Q ss_pred CccceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhc
Q 000859 456 SSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLML 535 (1251)
Q Consensus 456 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 535 (1251)
..-..|++++|.++ .+|..+. ++|+.|++++|+|+ .+|.. +++|++|++++|+|+. +|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 34556788888887 6676665 36777788877777 34532 4667777777777763 3432 234555555
Q ss_pred cCCccccCCchhhhhhcCCCeeecccccccccccccccCccceeeecccCccccCCCCCCCCcccCceeecccCcccccc
Q 000859 536 YNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKI 615 (1251)
Q Consensus 536 ~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 615 (1251)
++|.|+. +|..+ .+|+.|++++|+|+. +|. ..++|+.|++++|++++ +
T Consensus 270 s~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~------------------------LP~---~p~~L~~LdLS~N~L~~-L 317 (788)
T PRK15387 270 FSNPLTH-LPALP---SGLCKLWIFGNQLTS------------------------LPV---LPPGLQELSVSDNQLAS-L 317 (788)
T ss_pred cCCchhh-hhhch---hhcCEEECcCCcccc------------------------ccc---cccccceeECCCCcccc-C
Confidence 5555552 22211 334444444444431 221 12345555555555442 2
Q ss_pred CcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCcccccccc
Q 000859 616 PWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCS 695 (1251)
Q Consensus 616 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 695 (1251)
|... .+|+.|++ ++|.|++ +|.. ..+|++|+|++|+|++ +|.. .+
T Consensus 318 p~lp---~~L~~L~L------------------------s~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~ 362 (788)
T PRK15387 318 PALP---SELCKLWA------------------------YNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PS 362 (788)
T ss_pred CCCc---cccccccc------------------------ccCcccc-cccc---ccccceEecCCCccCC-CCCC---Cc
Confidence 2211 12334444 4444442 2221 1244555555555554 2321 13
Q ss_pred ccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhc
Q 000859 696 KLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDL 775 (1251)
Q Consensus 696 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l 775 (1251)
+|+.|++++|+|+ .+|... .+|+.|++++|+|+ .+|... ++|+.|++++|+|++ +|..+. +|+ .|++
T Consensus 363 ~L~~L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Lss-IP~l~~---~L~-~L~L 429 (788)
T PRK15387 363 ELYKLWAYNNRLT-SLPALP---SGLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLTS-LPMLPS---GLL-SLSV 429 (788)
T ss_pred ccceehhhccccc-cCcccc---cccceEEecCCccc-CCCCcc---cCCCEEEccCCcCCC-CCcchh---hhh-hhhh
Confidence 4555566666665 344322 35666777777766 344432 456777777777763 454332 333 3667
Q ss_pred cCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhc
Q 000859 776 SHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEM 815 (1251)
Q Consensus 776 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 815 (1251)
++|+|+ .+|.++..+++|+.|+|++|+|++..|..+..+
T Consensus 430 s~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 430 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred ccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 777776 567767777777777777777776666555443
No 419
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=3.6e-23 Score=216.06 Aligned_cols=170 Identities=21% Similarity=0.202 Sum_probs=129.6
Q ss_pred CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccccc
Q 000859 1030 GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDY 1109 (1251)
Q Consensus 1030 gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 1109 (1251)
|+|.++++.. ...+++.+++.++.|+++||+|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~------~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~- 62 (176)
T smart00750 1 VSLADILEVR------GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE- 62 (176)
T ss_pred CcHHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc-
Confidence 6899999763 35699999999999999999999998 5 999999999999999 9998764321
Q ss_pred CCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhc
Q 000859 1110 NSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLD 1189 (1251)
Q Consensus 1110 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1189 (1251)
...||+.|||||++.+..++.++|||||||++|||+||+.||............+......
T Consensus 63 --------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------- 123 (176)
T smart00750 63 --------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA----------- 123 (176)
T ss_pred --------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc-----------
Confidence 1257899999999999999999999999999999999999997543322222222111100
Q ss_pred ccCCCCCCchHHHHH--HHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1190 DQMKPLLPGEECAAY--QVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1190 ~~~~~~~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
. .....+....... ++.+++.+||+.||++||++.|+++.+..+..+
T Consensus 124 ~-~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 124 D-DPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred C-CccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0 0000111222222 689999999999999999999999998877543
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1.7e-23 Score=268.92 Aligned_cols=201 Identities=16% Similarity=0.186 Sum_probs=140.2
Q ss_pred hccC-CCccceeceeeecC-----CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 000859 999 RIRH-RHLVKLMGHCCNKG-----AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDC 1072 (1251)
Q Consensus 999 ~l~h-~niv~l~g~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 1072 (1251)
.++| +||++++++|.... ....+.++||+ +++|.++++.. ...+++.+++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~------~~~~~~~~~~~i~~qi~~al~~lH~~- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP------DRSVDAFECFHVFRQIVEIVNAAHSQ- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc------cccccHHHHHHHHHHHHHHHHHHHhC-
Confidence 3455 68888888762211 23457788988 56999999753 35689999999999999999999999
Q ss_pred CCCeeecCCCCCCeeecC-------------------CCCeEEcccccccccccccC----C--C------Ccccceeec
Q 000859 1073 VPKILHRDIKSSNILLDS-------------------NMEAHLGDFGLAKALVEDYN----S--N------TESNTWFAG 1121 (1251)
Q Consensus 1073 ~~~ivH~Dlkp~Nill~~-------------------~~~~kl~DfG~a~~~~~~~~----~--~------~~~~~~~~g 1121 (1251)
+|+||||||+|||++. ++.+|++|||+++....... . . ........|
T Consensus 100 --gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (793)
T PLN00181 100 --GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME 177 (793)
T ss_pred --CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence 9999999999999954 44566667776654211000 0 0 001112468
Q ss_pred ccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHH
Q 000859 1122 SYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEEC 1201 (1251)
Q Consensus 1122 t~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1201 (1251)
|+.|||||++.+..++.++|||||||++|||++|..|+..... ...... ..... + ....
T Consensus 178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-------~~~~~~-------~~~~~----~---~~~~ 236 (793)
T PLN00181 178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-------TMSSLR-------HRVLP----P---QILL 236 (793)
T ss_pred CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-------HHHHHH-------HhhcC----h---hhhh
Confidence 8999999999999999999999999999999999888643210 000000 00000 0 0011
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1202 AAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1202 ~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.......++.+||+.+|.+||+++|+++.
T Consensus 237 ~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 237 NWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred cCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 12345688899999999999999999864
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=1e-22 Score=248.14 Aligned_cols=266 Identities=27% Similarity=0.339 Sum_probs=201.9
Q ss_pred ccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccccccccCCeeecC
Q 000859 433 KLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCHQLIILDLA 512 (1251)
Q Consensus 433 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 512 (1251)
+-..|++++|.++ .+|..+. ++|+.|++++|+++ .+|.. .++|++|+|++|+|+ .+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 4567899999999 7788776 48999999999999 56753 578999999999999 45643 4689999999
Q ss_pred CCcCcccCCcchhccchhhhhhccCCccccCCchhhhhhcCCCeeecccccccccccccccCccceeeecccCccccCCC
Q 000859 513 DNKLSGGVPASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTNNEFDHEIP 592 (1251)
Q Consensus 513 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~n~l~~~~p 592 (1251)
+|+|+. +|..+ ++|+.|+|++|+|+. +|.. +++|+.|++++|+|++++. +|
T Consensus 271 ~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~Lp~---------------------lp 321 (788)
T PRK15387 271 SNPLTH-LPALP---SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA---------------------LP 321 (788)
T ss_pred CCchhh-hhhch---hhcCEEECcCCcccc-cccc---ccccceeECCCCccccCCC---------------------Cc
Confidence 999984 45433 568889999999994 4543 4789999999998875332 11
Q ss_pred CCCCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcc
Q 000859 593 PQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQ 672 (1251)
Q Consensus 593 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 672 (1251)
.+|+.|++++|++++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|.|+ .+|.. ..+
T Consensus 322 ------~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~ 383 (788)
T PRK15387 322 ------SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSG 383 (788)
T ss_pred ------ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccc
Confidence 245667777777763 4431 1467888888888874 5543 356777888888888 45543 356
Q ss_pred cccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccC
Q 000859 673 LGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSN 752 (1251)
Q Consensus 673 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~ 752 (1251)
|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+|... .+|+.|++++|+|+ .+|..++.+++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 8888888888886 4543 257888999999998 567543 46888999999998 7899999999999999999
Q ss_pred cccccccchhhhc
Q 000859 753 NSLNGVIPLEIGQ 765 (1251)
Q Consensus 753 N~l~~~~p~~~~~ 765 (1251)
|+|++..|..+..
T Consensus 455 N~Ls~~~~~~L~~ 467 (788)
T PRK15387 455 NPLSERTLQALRE 467 (788)
T ss_pred CCCCchHHHHHHH
Confidence 9998877765533
No 422
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-21 Score=223.30 Aligned_cols=267 Identities=23% Similarity=0.321 Sum_probs=199.1
Q ss_pred CCCcCceecccCCceEEEEEecCC--cEEEEEEeccCCchhhhHHHHHHHHHHHhccC----CCccceeceeeecCCCce
Q 000859 947 NLSDEFIIGSGGSGTVYKAELANG--ATVAVKKISCKDDHLLNKSFTREVKTLGRIRH----RHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~~~~~~~~~ 1020 (1251)
+|.+.+.||+|+||.||.|..... ..+|+|........... .+..|..++..+.. +++..+++... ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCcee
Confidence 789999999999999999965443 57899887654333222 67789999999863 68888887653 234456
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-----CCeE
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-----MEAH 1095 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~~k 1095 (1251)
++||+.. |.+|.+..+..+ .+.++..++.+|+.|++.+|+++|+. |++||||||.|+++... ..+.
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~-----~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ 167 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP-----PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLY 167 (322)
T ss_pred EEEEecc-CccHHHHHHhCC-----CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEE
Confidence 8999998 779999886653 57899999999999999999999999 99999999999999865 4699
Q ss_pred Eccccccc--ccccccCCC---Ccc-cceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhH
Q 000859 1096 LGDFGLAK--ALVEDYNSN---TES-NTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDM 1169 (1251)
Q Consensus 1096 l~DfG~a~--~~~~~~~~~---~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~ 1169 (1251)
+.|||+|+ .+....... ... ...+.||.+|+++....+...+.+.|+||++.++.|+..|..||........ .
T Consensus 168 llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~ 246 (322)
T KOG1164|consen 168 LLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-K 246 (322)
T ss_pred EEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-H
Confidence 99999999 443333211 111 2346799999999999999999999999999999999999999965533211 0
Q ss_pred HHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCc
Q 000859 1170 VRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRI 1239 (1251)
Q Consensus 1170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~ 1239 (1251)
... .... ....... .....+.++.++...+-..+..++|....+...+.+.+....
T Consensus 247 ~~~-~~~~------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~ 302 (322)
T KOG1164|consen 247 SKF-EKDP------RKLLTDR-------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEG 302 (322)
T ss_pred HHH-HHHh------hhhcccc-------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcC
Confidence 000 0000 0000000 111233456677777777999999999999999988887653
No 423
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-21 Score=203.98 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=203.2
Q ss_pred cCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCceeEE
Q 000859 946 NNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
-.|.+.++||+|.||.++.| .+-++++||||.-..+. ...++..|...++.+ ..+.|...|- .........+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS---~APQLrdEYr~YKlL~g~~GIP~vYY--FGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS---EAPQLRDEYRTYKLLGGTEGIPQVYY--FGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC---CcchHHHHHHHHHHHcCCCCCCceee--eccccchhhhh
Confidence 35889999999999999999 45679999999864433 235677888888888 4688888763 33445566899
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-----CeEEcc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-----EAHLGD 1098 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~~kl~D 1098 (1251)
+|.. |.+|.|..+-+ ++.++..++..+|.|++.-|+|+|++ .+|.|||||+|+||...+ .+.|+|
T Consensus 103 idLL-GPSLEDLFD~C------gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD 172 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLC------GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID 172 (449)
T ss_pred hhhh-CcCHHHHHHHh------cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence 9999 77999988776 57899999999999999999999999 999999999999997544 489999
Q ss_pred cccccccccccCCCC---cccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNT---ESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
||+|+.+.++..... ..+....||.+||+--...+...+.+.|+-|+|-++++++-|..||.+...... ..++..-
T Consensus 173 FGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn-K~kYeKI 251 (449)
T KOG1165|consen 173 FGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN-KEKYEKI 251 (449)
T ss_pred ccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch-HHHHHHh
Confidence 999998866544332 223346899999999999999999999999999999999999999987644321 1111110
Q ss_pred HHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCC
Q 000859 1176 HMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNN 1237 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~ 1237 (1251)
-........+++ -+..+.++...+.-.-..+-++-|+.+-+...+.++++.
T Consensus 252 Ge~Kr~T~i~~L-----------c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 252 GETKRSTPIEVL-----------CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred ccccccCCHHHH-----------HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 000000111111 122456777888888889999999999999988888863
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=9.5e-22 Score=195.83 Aligned_cols=272 Identities=20% Similarity=0.258 Sum_probs=201.3
Q ss_pred hcCCCcCceecccCCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccC-CCccceeceeeecCCCceeE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRH-RHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~~~l 1022 (1251)
...|..+++||.|+||.+|.| ...+|++||||+-..++.. .+...|.++++.+++ ..|..+..|..+ .....+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~y~~e--~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRHYGTE--KDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhhhccc--ccccee
Confidence 456889999999999999999 5678999999997655443 567789999999975 455555444433 344589
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC---CCCeEEccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS---NMEAHLGDF 1099 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Df 1099 (1251)
|||.. |.+|.+.+.-+ .+.++..+..-.|-|++.-++|+|.+ ++|||||||+|+|..- ...+.++||
T Consensus 89 VMdLL-GPsLEdLfnfC------~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDF 158 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFC------SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDF 158 (341)
T ss_pred eeecc-CccHHHHHHHH------hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEec
Confidence 99999 77999988765 46789999999999999999999999 9999999999999963 456899999
Q ss_pred ccccccccccCCC---CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1100 GLAKALVEDYNSN---TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1100 G~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
|+|+.+.+..... ........||.+|.+--...+...+.+.|+-|+|.++.++--|..||.+.....-.. ++..-.
T Consensus 159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q-KyEkI~ 237 (341)
T KOG1163|consen 159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ-KYEKIS 237 (341)
T ss_pred cchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH-HHHHHH
Confidence 9999876432221 222234689999999888888888999999999999999999999998764422111 111000
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcCCCccccc
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFNNRIVDFD 1243 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~~~~~~~~ 1243 (1251)
+......+.. .-...+.++...+..|-..--++-|+..-+.+.+...+.+-.-.++
T Consensus 238 ----EkK~s~~ie~-------LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d 293 (341)
T KOG1163|consen 238 ----EKKMSTPIEV-------LCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYD 293 (341)
T ss_pred ----HhhcCCCHHH-------HhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCC
Confidence 0000000000 0111456678889999999999999999888888777765544444
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2e-21 Score=220.12 Aligned_cols=168 Identities=19% Similarity=0.176 Sum_probs=127.7
Q ss_pred hhcCCCcCceecccCCceEEEEEec--CCcEEEEEEeccCC----chhhhHHHHHHHHHHHhccCCCccceeceeeecCC
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELA--NGATVAVKKISCKD----DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGA 1017 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 1017 (1251)
...+|...+.||+|+||+||+|..+ +++.||||++.... .....+.|.+|++++++++|+|+++.+..+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 4567999999999999999999654 57788999875331 223456789999999999999998633221
Q ss_pred CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC-CCCCeeecCCCCeEE
Q 000859 1018 GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDI-KSSNILLDSNMEAHL 1096 (1251)
Q Consensus 1018 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl 1096 (1251)
...++||||+++++|... .. .. ...++.|+++|++|||+. +|+|||| ||+||+++.++.+||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-------~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikL 153 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-------HG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAV 153 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-------cc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEE
Confidence 235899999999999632 11 01 136788999999999999 9999999 999999999999999
Q ss_pred cccccccccccccCCCC----cccceeecccceeccccccc
Q 000859 1097 GDFGLAKALVEDYNSNT----ESNTWFAGSYGYIAPEYAYS 1133 (1251)
Q Consensus 1097 ~DfG~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~ 1133 (1251)
+|||+|+.+........ ..-....+++.|+|||.+..
T Consensus 154 iDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 154 IDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999987654321111 11124567888999998753
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.7e-21 Score=237.91 Aligned_cols=287 Identities=26% Similarity=0.409 Sum_probs=170.0
Q ss_pred cceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccC
Q 000859 458 LKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYN 537 (1251)
Q Consensus 458 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 537 (1251)
.+.|+++++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. .+|+.|+|++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 345555555555 4444432 35566666666665 3444332 35666666666665 3343332 2456666666
Q ss_pred CccccCCchhhhhhcCCCeeecccccccccccccccCccceeeecccCccccCCCCCCCCcccCceeecccCccccccCc
Q 000859 538 NSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPW 617 (1251)
Q Consensus 538 N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 617 (1251)
|.+. .+|..+. .+|+.|++++|+|+.+ |..+. ++|+.|++++|++++ +|.
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~~L------------------------P~~l~--~sL~~L~Ls~N~Lt~-LP~ 300 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKISCL------------------------PENLP--EELRYLSVYDNSIRT-LPA 300 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccCcc------------------------ccccC--CCCcEEECCCCcccc-Ccc
Confidence 6665 3444432 3566666666666533 22221 356666666666653 333
Q ss_pred ccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCcccccccccc
Q 000859 618 TFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKL 697 (1251)
Q Consensus 618 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 697 (1251)
.+. .+|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+. +|..+. ++|
T Consensus 301 ~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L 369 (754)
T PRK15370 301 HLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETLP--PTI 369 (754)
T ss_pred cch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhhc--CCc
Confidence 322 356677777777763 444332 567777777777773 555442 678888888888775 465443 578
Q ss_pred ceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCccc----ccccccceeeccCcccccccchhhhchhhHHHHH
Q 000859 698 LVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAI----GRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSIL 773 (1251)
Q Consensus 698 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~----~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L 773 (1251)
+.|+|++|+|+ .+|..+. .+|+.|++++|+|+ .+|..+ +.++++..|+|.+|+++. ..+++|+. +
T Consensus 370 ~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~-L 438 (754)
T PRK15370 370 TTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQR-L 438 (754)
T ss_pred CEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHH-h
Confidence 88888888888 5666554 46888999999988 566544 345788999999999862 45556654 3
Q ss_pred hccCCcccC-CCCCCcCccccccEEEccCCcccc
Q 000859 774 DLSHNNFTG-QIPPSMGTLAKLEVLNLSHNQLVG 806 (1251)
Q Consensus 774 ~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~ 806 (1251)
++.+.+.| .++.+++.+.+++....-++.+++
T Consensus 439 -l~s~~~~gp~i~~~~~~~~~l~~~~~l~~a~~~ 471 (754)
T PRK15370 439 -MSSVGYQGPRVLFAMGDFSIVRVTRPLHQAVQG 471 (754)
T ss_pred -hhcccccCCcccccccccccccccchHHHHHhc
Confidence 45566654 345555555555544444444443
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.2e-21 Score=237.00 Aligned_cols=257 Identities=19% Similarity=0.225 Sum_probs=189.5
Q ss_pred cCceecccCCceEEEEE-ecCCcEEEEEEec----cCC-chhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 950 DEFIIGSGGSGTVYKAE-LANGATVAVKKIS----CKD-DHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 950 ~~~~lG~G~fg~V~~~~-~~~~~~vavK~~~----~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
...++|.|++|.|+.+. .......+.|.++ ... .......+..|+.+-..+.|||++..+..+.+.... .-.
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~--~~~ 399 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI--LQS 399 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc--hhh
Confidence 45579999999888874 3334444555443 111 222222366788888889999998888766544332 334
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
|||+++ +|+.++... ..++..++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+.
T Consensus 400 mE~~~~-Dlf~~~~~~-------~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~ 468 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN-------GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAAS 468 (601)
T ss_pred hhcccH-HHHHHHhcc-------cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcce
Confidence 999999 999999762 4688899999999999999999999 99999999999999999999999999998
Q ss_pred ccccccCCCCcccceeecccceecccccccCCCCCc-cceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccch
Q 000859 1104 ALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEK-CDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGS 1182 (1251)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (1251)
.+.-+...........+|+..|+|||++.+..|+.+ .||||.|+++..|.+|+.||......+....... .
T Consensus 469 vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-------~- 540 (601)
T KOG0590|consen 469 VFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-------Y- 540 (601)
T ss_pred eeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc-------c-
Confidence 776555444455566899999999999999998765 8999999999999999999976654433220000 0
Q ss_pred hhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1183 AREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
...... ..+........+.....+|.++++.||.+|.|+++|++.
T Consensus 541 --~~~~~~-~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 541 --SDQRNI-FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred --cccccc-ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000 001111223355667889999999999999999999763
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1e-20 Score=232.85 Aligned_cols=203 Identities=24% Similarity=0.394 Sum_probs=131.8
Q ss_pred cCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCccccccccc
Q 000859 600 SLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLS 679 (1251)
Q Consensus 600 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 679 (1251)
+|+.|+|++|++. .+|..+. .+|+.|++++|+|+ .+|..+. ++|+.|++++|.|++ +|..+. ++|+.|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhc
Confidence 3444555555544 3333332 34666666666666 3454443 467777777777763 444332 467888888
Q ss_pred CccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCccccccc
Q 000859 680 FNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVI 759 (1251)
Q Consensus 680 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 759 (1251)
+|++++ +|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+
T Consensus 313 ~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 313 SNSLTA-LPETLP--PGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred CCcccc-CCcccc--ccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 888875 454432 57888888888888 4676554 68999999999988 5776653 68999999999998 46
Q ss_pred chhhhchhhHHHHHhccCCcccCCCCCCcC----ccccccEEEccCCccccCCchhhhhccCCCcEeeccccCcCcc
Q 000859 760 PLEIGQLQNLQSILDLSHNNFTGQIPPSMG----TLAKLEVLNLSHNQLVGELPSQLGEMSSLGKLNLSYNDLQGKL 832 (1251)
Q Consensus 760 p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~----~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 832 (1251)
|..+.. .| +.|++++|+|+ .+|.++. .++++..|+|.+|+++. . .+++|+.| ++.+.+.|+.
T Consensus 383 P~~l~~--sL-~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~---~---tl~~L~~L-l~s~~~~gp~ 448 (754)
T PRK15370 383 PENLPA--AL-QIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE---R---TIQNMQRL-MSSVGYQGPR 448 (754)
T ss_pred CHhHHH--HH-HHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH---H---HHHHHHHh-hhcccccCCc
Confidence 665542 45 35899999998 6776543 34678888999998872 2 33344444 4455555543
No 429
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.2e-20 Score=224.12 Aligned_cols=251 Identities=22% Similarity=0.254 Sum_probs=181.3
Q ss_pred CCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHH--HhccCCCccceeceeeecCCCceeEEE
Q 000859 947 NLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTL--GRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
++...+.+|.+.|=+|.+|+.+.|. |+||++-++.+....+.|.++++-. ..++|||++++.-+- ......|+|=
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~--~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL--VTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH--HhhHHHHHHH
Confidence 4666778999999999999888776 9999998777666666666555444 444899999998754 3344457888
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
+|... +|+|.+.. +..+...+.+.|+.|++.|+.-+|.. ||+|||||.+|||+++-.-+.|+||..-+.
T Consensus 101 qyvkh-nLyDRlST-------RPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 101 QYVKH-NLYDRLST-------RPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKP 169 (1431)
T ss_pred HHHhh-hhhhhhcc-------chHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCC
Confidence 88865 89998876 34678888999999999999999999 999999999999999999999999987654
Q ss_pred cccccCCCCcccceee----cccceecccccccC-----------CCCCccceeehhHHHHHHhh-CCCCCCCccccchh
Q 000859 1105 LVEDYNSNTESNTWFA----GSYGYIAPEYAYSL-----------KATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMD 1168 (1251)
Q Consensus 1105 ~~~~~~~~~~~~~~~~----gt~~y~aPE~~~~~-----------~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~ 1168 (1251)
..-+...... .+.+. .--.|.|||.+... ..+++.||||.||+++|+++ |++||.-. +
T Consensus 170 tYLPeDNPad-f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----Q 243 (1431)
T KOG1240|consen 170 TYLPEDNPAD-FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----Q 243 (1431)
T ss_pred ccCCCCCccc-ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----H
Confidence 3221111111 11111 12359999987541 15678999999999999999 89998522 1
Q ss_pred HHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1169 MVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
+..|.... ....+..+. ......+++++..|++.||++|-|+++.++..
T Consensus 244 L~aYr~~~----~~~~e~~Le----------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 244 LLAYRSGN----ADDPEQLLE----------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHhHhccC----ccCHHHHHH----------hCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 11111110 111111111 11223588999999999999999999999873
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.80 E-value=8.4e-19 Score=204.16 Aligned_cols=263 Identities=30% Similarity=0.391 Sum_probs=196.7
Q ss_pred CCcCceecccCCceEEEEEecCCcEEEEEEeccCCchh--hhHHHHHHHHHHHhccCC-CccceeceeeecCCCceeEEE
Q 000859 948 LSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHL--LNKSFTREVKTLGRIRHR-HLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
|.....||.|+||.||++... ..+|+|.+....... ....+.+|+.+++.+.|+ +++++++++.. ....++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--EGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec--CCEEEEEE
Confidence 566778999999999999776 889999997665443 477899999999999888 79999998833 33368999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC-CeEEccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM-EAHLGDFGLAK 1103 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~ 1103 (1251)
|++.++++.+++...... ..++......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++
T Consensus 78 ~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRK----GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred ecCCCCcHHHHHHhcccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 999999999777654211 3688999999999999999999999 999999999999999998 79999999997
Q ss_pred ccccccCCCC--cccceeecccceeccccccc---CCCCCccceeehhHHHHHHhhCCCCCCCcccc--chhHHHHHHHH
Q 000859 1104 ALVEDYNSNT--ESNTWFAGSYGYIAPEYAYS---LKATEKCDVYSMGIVLMELVSGKMPTDATFGV--EMDMVRWVEMH 1176 (1251)
Q Consensus 1104 ~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~ 1176 (1251)
.+........ .......||..|+|||.+.+ ..+....|+||+|++++++++|..||...... ...........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (384)
T COG0515 151 LLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL 230 (384)
T ss_pred ecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc
Confidence 5543322111 12345689999999999987 57889999999999999999999997655331 11111111100
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDL 1230 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 1230 (1251)
.. . ........... ......+.+++..|+..+|..|.+..+....
T Consensus 231 ~~----~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 231 PT----P---SLASPLSPSNP--ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CC----c---ccccccCcccc--chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 0 00000000000 1223567899999999999999999987765
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.6e-19 Score=189.52 Aligned_cols=174 Identities=14% Similarity=0.161 Sum_probs=134.0
Q ss_pred hhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchh--hhHH------HHHHHHHHHhccCCCccceeceeeec
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHL--LNKS------FTREVKTLGRIRHRHLVKLMGHCCNK 1015 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~--~~~~------~~~E~~~l~~l~h~niv~l~g~~~~~ 1015 (1251)
...+|+..+++|.|+||.||.++. ++..+|||+++...... ..+. +.+|+..+.+++||+|....+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 468899999999999999999866 57789999997543222 1122 68999999999999999999876543
Q ss_pred C------CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec
Q 000859 1016 G------AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD 1089 (1251)
Q Consensus 1016 ~------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 1089 (1251)
. ....+++|||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 2 234689999999999988732 122 2456999999999999 999999999999999
Q ss_pred CCCCeEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHh
Q 000859 1090 SNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELV 1153 (1251)
Q Consensus 1090 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~ 1153 (1251)
.+| ++++|||..+....+.. ...++....+..++|+||+||++....
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a----------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKA----------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhh----------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 988 99999998865421100 011344556778999999999987554
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=4.5e-21 Score=180.99 Aligned_cols=164 Identities=34% Similarity=0.572 Sum_probs=118.4
Q ss_pred CCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccc
Q 000859 595 LGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLG 674 (1251)
Q Consensus 595 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 674 (1251)
+.++..++.|.|++|+++ .+|..++.+.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. ..|.-||.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445677788888888887 56667888888888888888887 68888888888888888888887 7788888888888
Q ss_pred cccccCccccCC-CccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCc
Q 000859 675 ELKLSFNQFVGF-LPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNN 753 (1251)
Q Consensus 675 ~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 753 (1251)
.|||.+|.+.+. +|..|+.++.|+.|+|++|.+. .+|..++.+++|+.|.+.+|.+- .+|..++.+.+|++|++.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 888888887753 6777777777777777777776 56666666666666666666655 45555555555555555555
Q ss_pred ccccccchhhh
Q 000859 754 SLNGVIPLEIG 764 (1251)
Q Consensus 754 ~l~~~~p~~~~ 764 (1251)
+++ ++|.+++
T Consensus 184 rl~-vlppel~ 193 (264)
T KOG0617|consen 184 RLT-VLPPELA 193 (264)
T ss_pred eee-ecChhhh
Confidence 554 4444443
No 433
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=5.7e-19 Score=184.48 Aligned_cols=139 Identities=18% Similarity=0.141 Sum_probs=107.2
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCch-hh------------------------hHHHHHHHHHHHhccCCCcc
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDH-LL------------------------NKSFTREVKTLGRIRHRHLV 1006 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~-~~------------------------~~~~~~E~~~l~~l~h~niv 1006 (1251)
..||+|+||.||+|...+|++||||+++..... .. ......|++.++++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 479999999999998778999999999654211 00 11224599999999888774
Q ss_pred ceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCCeeecCCCCCC
Q 000859 1007 KLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYL-HHDCVPKILHRDIKSSN 1085 (1251)
Q Consensus 1007 ~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlkp~N 1085 (1251)
....+.. . ..++||||++++++...... ...++..++.+++.|++.+++|+ |+. +|+||||||+|
T Consensus 83 ~p~~~~~--~--~~~iVmE~i~g~~l~~~~~~-------~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~N 148 (190)
T cd05147 83 CPEPILL--K--SHVLVMEFIGDDGWAAPRLK-------DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYN 148 (190)
T ss_pred CCcEEEe--c--CCEEEEEEeCCCCCcchhhh-------cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence 4332221 1 23899999998776554322 24578899999999999999999 688 99999999999
Q ss_pred eeecCCCCeEEccccccccc
Q 000859 1086 ILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1086 ill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+++ ++.++++|||+|...
T Consensus 149 Ili~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 149 LLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred EEEE-CCcEEEEEccccccC
Confidence 9998 578999999999643
No 434
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=3.1e-19 Score=190.00 Aligned_cols=204 Identities=22% Similarity=0.269 Sum_probs=144.2
Q ss_pred cCCCccceeceeeecC-------------------------CCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHH
Q 000859 1001 RHRHLVKLMGHCCNKG-------------------------AGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARL 1055 (1251)
Q Consensus 1001 ~h~niv~l~g~~~~~~-------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~ 1055 (1251)
+|||||++.++|++.- +...|+||...+. +|.+|+..+ ..+...+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~--------~~s~r~~~ 344 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR--------HRSYRTGR 344 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC--------CCchHHHH
Confidence 5999999999876541 3345888887754 899998753 45666777
Q ss_pred HHHHHHHHHHHHhhhcCCCCeeecCCCCCCeee--cCCCC--eEEcccccccccccccCC-CCcc-cceeecccceeccc
Q 000859 1056 KIAVGLAQGVEYLHHDCVPKILHRDIKSSNILL--DSNME--AHLGDFGLAKALVEDYNS-NTES-NTWFAGSYGYIAPE 1129 (1251)
Q Consensus 1056 ~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill--~~~~~--~kl~DfG~a~~~~~~~~~-~~~~-~~~~~gt~~y~aPE 1129 (1251)
-|..|+++|+.|||.+ ||.|||+|.+||++ |+|+. ..|+|||++-.-....-. .... .....|...-||||
T Consensus 345 ~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPE 421 (598)
T KOG4158|consen 345 VILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPE 421 (598)
T ss_pred HHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchh
Confidence 8899999999999999 99999999999999 44443 678999987432110000 0000 01134677899999
Q ss_pred ccccCC------CCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHH
Q 000859 1130 YAYSLK------ATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAA 1203 (1251)
Q Consensus 1130 ~~~~~~------~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1203 (1251)
+....+ --.++|.|+.|.+.||+++...||......-.+...|.+ . ...+.++.++
T Consensus 422 i~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe---------------~---qLPalp~~vp 483 (598)
T KOG4158|consen 422 IATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE---------------S---QLPALPSRVP 483 (598)
T ss_pred hhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh---------------h---hCCCCcccCC
Confidence 876433 235899999999999999999999763222222211111 0 1222345577
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 000859 1204 YQVLEIALQCTKTSPQERPSSRQVCDLLLNV 1234 (1251)
Q Consensus 1204 ~~l~~li~~cl~~dP~~RPs~~eil~~L~~~ 1234 (1251)
+.+.+++...++.||.+||+..-..+++.=.
T Consensus 484 p~~rqlV~~lL~r~pskRvsp~iAANvl~Ls 514 (598)
T KOG4158|consen 484 PVARQLVFDLLKRDPSKRVSPNIAANVLNLS 514 (598)
T ss_pred hHHHHHHHHHhcCCccccCCccHHHhHHHHH
Confidence 8899999999999999999998777776543
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=3.4e-21 Score=181.79 Aligned_cols=121 Identities=33% Similarity=0.579 Sum_probs=52.5
Q ss_pred ccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCC-CCCcccccccccceeeccCcccccccchhhhchhh
Q 000859 690 ELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSG-PIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQN 768 (1251)
Q Consensus 690 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 768 (1251)
++..+++|+.|++.-|++. .+|..|+.++.|++|||+.|.+.. .+|..|..+..|+.|+|++|-+. .+|..+++|++
T Consensus 74 ~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~ 151 (264)
T KOG0617|consen 74 SISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTN 151 (264)
T ss_pred hhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcc
Confidence 3333333333333333333 334444444444444444443332 23444444444444444444444 34444444444
Q ss_pred HHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhc
Q 000859 769 LQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEM 815 (1251)
Q Consensus 769 l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 815 (1251)
|| +|.++.|.+. ++|.+++.+++|++|.+.+|+++ .+|.+++.+
T Consensus 152 lq-il~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 152 LQ-ILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred ee-EEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 43 3444444444 34444455555555555555554 444444443
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=3.1e-18 Score=196.71 Aligned_cols=221 Identities=28% Similarity=0.386 Sum_probs=165.5
Q ss_pred HHhccCCCccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 000859 997 LGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKI 1076 (1251)
Q Consensus 997 l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 1076 (1251)
|+.+.|.|+.+|+|.+.+. ...++|.+|+..|+|.+.+... ...+++.-...+.++|+.||+|+|.. +|
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~------~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i 69 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNE------DIKLDYFFILSFIRDISKGLAYLHNS---PI 69 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhcc------ccCccHHHHHHHHHHHHHHHHHHhcC---cc
Confidence 4568999999999998776 4468999999999999999874 35688888999999999999999997 44
Q ss_pred -eecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccCC-------CCCccceeehhHH
Q 000859 1077 -LHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLK-------ATEKCDVYSMGIV 1148 (1251)
Q Consensus 1077 -vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDiwSlGv~ 1148 (1251)
.|+.++++|+++|....+|++|||+.....+. ..........-..-|.|||.++... .+.++||||||++
T Consensus 70 ~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~--~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii 147 (484)
T KOG1023|consen 70 GYHGALKSSNCLVDSRWVLKLTDFGLNSLLEET--AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGII 147 (484)
T ss_pred eeeeeeccccceeeeeEEEEechhhhccccccc--ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHH
Confidence 99999999999999999999999998765431 1111111123456799999887631 4677999999999
Q ss_pred HHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 000859 1149 LMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVC 1228 (1251)
Q Consensus 1149 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil 1228 (1251)
++|+++.+.||+.....+.. .+.+.... ..-....+|.........+++..++..||..+|++||++++|.
T Consensus 148 ~~ei~~r~~~~~~~~~~~~~-~eii~~~~--------~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 148 MYEILFRSGPFDLRNLVEDP-DEIILRVK--------KGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred HHHHHhccCccccccccCCh-HHHHHHHH--------hcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence 99999999999864333322 11111100 0011112233322223445789999999999999999999999
Q ss_pred HHHHhhcCCCc
Q 000859 1229 DLLLNVFNNRI 1239 (1251)
Q Consensus 1229 ~~L~~~~~~~~ 1239 (1251)
..++.+.....
T Consensus 219 ~~~~~~~~~~~ 229 (484)
T KOG1023|consen 219 SKLLTINKGGS 229 (484)
T ss_pred hhhhhhccccc
Confidence 99998887654
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=5.7e-18 Score=178.06 Aligned_cols=139 Identities=20% Similarity=0.218 Sum_probs=109.4
Q ss_pred CceecccCCceEEEEEecCCcEEEEEEeccCCch-------------------------hhhHHHHHHHHHHHhccCCCc
Q 000859 951 EFIIGSGGSGTVYKAELANGATVAVKKISCKDDH-------------------------LLNKSFTREVKTLGRIRHRHL 1005 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~l~h~ni 1005 (1251)
...||+|+||.||+|...+|+.||||+++..... .....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999997778999999998754211 001234578999999999987
Q ss_pred cceeceeeecCCCceeEEEeecCCCChHHh-hhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCC
Q 000859 1006 VKLMGHCCNKGAGSNLLIYEYMENGSVWDW-LHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKS 1083 (1251)
Q Consensus 1006 v~l~g~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp 1083 (1251)
.....+... . .++||||++++++... +.. ..++..+..+++.|++.++.++|+ . ||+||||||
T Consensus 82 ~~p~~~~~~--~--~~lVmE~~~g~~~~~~~l~~--------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP 146 (190)
T cd05145 82 PVPEPILLK--K--NVLVMEFIGDDGSPAPRLKD--------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSE 146 (190)
T ss_pred CCceEEEec--C--CEEEEEEecCCCchhhhhhh--------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCCh
Confidence 544433322 1 3899999998855433 332 346788899999999999999999 8 999999999
Q ss_pred CCeeecCCCCeEEccccccccc
Q 000859 1084 SNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1084 ~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
+||+++ ++.++|+|||+|+..
T Consensus 147 ~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 147 YNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred hhEEEE-CCCEEEEEcccceec
Confidence 999999 899999999999765
No 438
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=3.9e-18 Score=174.50 Aligned_cols=190 Identities=14% Similarity=0.070 Sum_probs=137.5
Q ss_pred CcCceecccCCceEEEEEecCCcEEEEEEeccCCc---hhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeEEE
Q 000859 949 SDEFIIGSGGSGTVYKAELANGATVAVKKISCKDD---HLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 949 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
.+...|++|+||+||.+.- .+.+++.+.+....- ......+.+|+++|+++. |++|++++++. ..+++|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------~~~lvm 77 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------GRHLDR 77 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------CEEEEE
Confidence 3456899999999998865 578888887743322 112235789999999995 58899998751 248999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC-CCCCeeecCCCCeEEccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDI-KSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
||++|.+|.+.... . ...++.|++++++++|+. ||+|||| ||+||+++.++.++|+|||+|.
T Consensus 78 eyI~G~~L~~~~~~--------~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~ 140 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAV 140 (218)
T ss_pred eeecCccHHhhhhh--------h------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence 99999888654321 1 134778999999999999 9999999 7999999999999999999997
Q ss_pred ccccccCC----CCc-----ccceeecccceecccccccC-CCC-CccceeehhHHHHHHhhCCCCCCCc
Q 000859 1104 ALVEDYNS----NTE-----SNTWFAGSYGYIAPEYAYSL-KAT-EKCDVYSMGIVLMELVSGKMPTDAT 1162 (1251)
Q Consensus 1104 ~~~~~~~~----~~~-----~~~~~~gt~~y~aPE~~~~~-~~~-~~sDiwSlGv~l~el~tg~~p~~~~ 1162 (1251)
.......- ... .+.....++.|++|+...-. ..+ .+.+.++-|.-+|.++||..|+.+.
T Consensus 141 ~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 141 RGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred ecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 54321110 000 01122356777788753322 222 5678999999999999999887543
No 439
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.74 E-value=4.6e-19 Score=202.20 Aligned_cols=236 Identities=25% Similarity=0.311 Sum_probs=181.8
Q ss_pred ecccCCceEEEEEe----cCCcEEEEEEeccCCchh-hhHHHHHHHHHHHhcc-CCCccceeceeeecCCCceeEEEeec
Q 000859 954 IGSGGSGTVYKAEL----ANGATVAVKKISCKDDHL-LNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 954 lG~G~fg~V~~~~~----~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+|+|+||.|+.++. +.|.-+|.|+.+...... .......|..++..++ ||.+|++.-.+. .+...+++++|.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq--t~~kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ--TDGKLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec--cccchhHhhhhc
Confidence 79999999998733 346778998886544211 1224556888899996 999999976554 345568999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 1107 (1251)
.+|++...+.. ...++..........++-|++++|+. +|+|||+|++||+++.+|.+++.|||.++...+
T Consensus 80 rgg~lft~l~~-------~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 80 RGGDLFTRLSK-------EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred ccchhhhcccc-------CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 99999888776 34567777777888899999999999 999999999999999999999999999976543
Q ss_pred ccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHHHhccchhhhhh
Q 000859 1108 DYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREEL 1187 (1251)
Q Consensus 1108 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1251)
... .+||..|||||++. ....++|.||||++.+||+||..||... .
T Consensus 150 ~~~--------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~------------------------~ 195 (612)
T KOG0603|consen 150 EKI--------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD------------------------T 195 (612)
T ss_pred hhh--------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH------------------------H
Confidence 211 18899999999988 6788999999999999999999999751 0
Q ss_pred hcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCH--HHHHHHHHhhc
Q 000859 1188 LDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSS--RQVCDLLLNVF 1235 (1251)
Q Consensus 1188 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~eil~~L~~~~ 1235 (1251)
....++..++.+........+++..+...+|..|--. ..+.+..+.-+
T Consensus 196 ~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f 245 (612)
T KOG0603|consen 196 MKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEF 245 (612)
T ss_pred HHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccch
Confidence 1111223445556667778889999999999999665 34444444333
No 440
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=4.9e-18 Score=183.75 Aligned_cols=239 Identities=22% Similarity=0.262 Sum_probs=146.7
Q ss_pred CCcCceecccCCceEEEEEe-cCCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhcc----------CCCccceeceeee
Q 000859 948 LSDEFIIGSGGSGTVYKAEL-ANGATVAVKKISCKDD--HLLNKSFTREVKTLGRIR----------HRHLVKLMGHCCN 1014 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~----------h~niv~l~g~~~~ 1014 (1251)
+.....||.|+|+.||.++. .+++++|||++....+ ....+.+.+|.-....+. |-.++.-++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 44566899999999999954 5689999999865542 223456666654444422 2122222221111
Q ss_pred --------cCC--C-----ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 000859 1015 --------KGA--G-----SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHR 1079 (1251)
Q Consensus 1015 --------~~~--~-----~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 1079 (1251)
... . ..+++|+-+ .+||.+++..-.........+....+..+..|+++.+++||+. |+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 111 1 225677877 4688887643110001122344555667778999999999999 99999
Q ss_pred CCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccceecccccccC--------CCCCccceeehhHHHHH
Q 000859 1080 DIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSL--------KATEKCDVYSMGIVLME 1151 (1251)
Q Consensus 1080 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~sDiwSlGv~l~e 1151 (1251)
||+|+|++++.+|.++++||+........... ...+..|.+||..... .++.+.|.|++|+++|.
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec-------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 99999999999999999999987654332111 2345779999976442 47889999999999999
Q ss_pred HhhCCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCC
Q 000859 1152 LVSGKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQER 1221 (1251)
Q Consensus 1152 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1221 (1251)
|++|..||+...+...... .+. .+. ..+..+..+|..+++.+|.+|
T Consensus 243 lWC~~lPf~~~~~~~~~~~----------------~f~-------~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEADPEW----------------DFS-------RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHSS-STCCCGGGSTSGG----------------GGT-------TSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHccCCCCCCCccccccc----------------cch-------hcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999999985533211000 001 112 456779999999999999988
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=9.4e-20 Score=210.25 Aligned_cols=250 Identities=28% Similarity=0.344 Sum_probs=160.3
Q ss_pred EeccCCccCC-CCCCCCCCCCCcccEEEccCCCCCCC----cCccccccCcccEEecccccccC------CCCcccCCCc
Q 000859 75 SLNLSGLSLA-GSISPSLGRLQSLIHLDLSSNSLTGP----IPTALSNLSSLESLLLFSNQLAG------TIPTQLGSLT 143 (1251)
Q Consensus 75 ~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~------~~p~~l~~l~ 143 (1251)
.|+|.++.+. +.....+..++.|+.|+++++.++.. ++..+...++|++|+++++.+.+ .++..++.++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665 33444455667788888888877543 55566677778888888877662 2345566677
Q ss_pred cccEEEeccCCCCCCCCCccccccc---ccccccccCCCCC----CCCCCcCcc-cccceeeeccccccCC----CCccc
Q 000859 144 SLRVMRIGDNWLSGSIPTSFGNLVN---LGTLGLASCSLSG----PIPPQFGQL-SQLEELILQQNQLQGP----IPAEL 211 (1251)
Q Consensus 144 ~L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~L~~n~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~~ 211 (1251)
+|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|++|+|++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888877666666655555 7888888777763 233344455 6778888887777642 23345
Q ss_pred CCCCCCceeeccccccCCC----chhhhcccccCceeeccCccCCCC----CCccccCCCccceeeccCccccCcCCccc
Q 000859 212 GNCSSLSIFTAAENNLNGS----IPAALGRLQNLQLLNLGNNSLSGE----IPSELGELSQLGYLNLMGNRLEGAIPRSF 283 (1251)
Q Consensus 212 ~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 283 (1251)
..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 6667777777777777742 334445556777777777777633 23345566777777777777765333322
Q ss_pred cc-----CCCccEEEeccccccC----CCCCccccccceEEEEccCcccc
Q 000859 284 AK-----MGNLQSLDLSMNRLTG----GIPEEFGNMGQLVFLVLSNNNIS 324 (1251)
Q Consensus 284 ~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 324 (1251)
.. .+.|+.|++++|.++. .+...+..+++|+++++++|.++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 22 3677777777777752 22334455567777777777776
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=2.8e-19 Score=206.30 Aligned_cols=254 Identities=25% Similarity=0.318 Sum_probs=127.3
Q ss_pred EEEeccCCCC-CCCCCcccccccccccccccCCCCC----CCCCCcCcccccceeeeccccccC------CCCcccCCCC
Q 000859 147 VMRIGDNWLS-GSIPTSFGNLVNLGTLGLASCSLSG----PIPPQFGQLSQLEELILQQNQLQG------PIPAELGNCS 215 (1251)
Q Consensus 147 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 215 (1251)
.|+|+.+.++ ...+.-|..+.+|+.|++++|.++. .++..+...++|++|+++++.+.+ .++..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777776 3445555666777777777777753 244445556667777777766552 2233445555
Q ss_pred CCceeeccccccCCCchhhhccccc---CceeeccCccCCC----CCCccccCC-CccceeeccCccccCc----CCccc
Q 000859 216 SLSIFTAAENNLNGSIPAALGRLQN---LQLLNLGNNSLSG----EIPSELGEL-SQLGYLNLMGNRLEGA----IPRSF 283 (1251)
Q Consensus 216 ~L~~L~l~~n~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~Ls~N~l~~~----~~~~~ 283 (1251)
+|+.|++++|.+.+..+..+..+.. |++|++++|.+++ .+...+..+ ++|++|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 6666666666665545555544444 6666666655542 112223334 5555555555555422 12233
Q ss_pred ccCCCccEEEeccccccCC----CCCccccccceEEEEccCccccCcccccccccccchhhhhccchhcccCCCcCccCC
Q 000859 284 AKMGNLQSLDLSMNRLTGG----IPEEFGNMGQLVFLVLSNNNISGSIPRRICTNATSLEHLILAEIQLSGEIPVELSQC 359 (1251)
Q Consensus 284 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 359 (1251)
..+.+|+.|++++|.+++. ++..+..+++|++|+|++|.+++.... .+...+..+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~---------------------~l~~~~~~~ 220 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS---------------------ALAETLASL 220 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH---------------------HHHHHhccc
Confidence 4444555555555555421 112222333455555555544311110 112234445
Q ss_pred CCCceEEccCCcccCCccccccc-----cccccEEEeeccccccc----ccccccccccccEEEecccccC
Q 000859 360 QSLKQLDLSNNTLNGTIPVELFQ-----LVALTHLYLHNNSLVGS----ISPFVANLSNLQELALYHNNFQ 421 (1251)
Q Consensus 360 ~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 421 (1251)
++|++|++++|.+++.....+.. ...|++|++++|.++.. ....+..+++|+++++++|.+.
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 66666666666665322222221 14555555555555421 1223334445555555555555
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.69 E-value=1.4e-16 Score=167.68 Aligned_cols=140 Identities=16% Similarity=0.231 Sum_probs=105.9
Q ss_pred CCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-----cCCCccceeceeeecCC-Cc-e
Q 000859 948 LSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-----RHRHLVKLMGHCCNKGA-GS-N 1020 (1251)
Q Consensus 948 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~~~-~~-~ 1020 (1251)
+.....||+|+||.||. ...++. .+||++..... ...+.+.+|+++++.+ +||||++++|++..... +. .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcC-eEEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 44566899999999996 333444 47998865432 2446789999999999 57999999998876543 22 2
Q ss_pred eEEEee--cCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHH-HHhhhcCCCCeeecCCCCCCeeecC----CCC
Q 000859 1021 LLIYEY--MENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGV-EYLHHDCVPKILHRDIKSSNILLDS----NME 1093 (1251)
Q Consensus 1021 ~lv~E~--~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlkp~Nill~~----~~~ 1093 (1251)
.+|+|| +++|+|.+++++. .+++. ..++.|++.++ +|||+. +|+||||||+||+++. ++.
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~--------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC--------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc--------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 378999 5579999999752 24444 35577778777 999999 9999999999999974 347
Q ss_pred eEEccccccc
Q 000859 1094 AHLGDFGLAK 1103 (1251)
Q Consensus 1094 ~kl~DfG~a~ 1103 (1251)
++|+||+.+.
T Consensus 148 ~~LiDg~G~~ 157 (210)
T PRK10345 148 PVVCDNIGES 157 (210)
T ss_pred EEEEECCCCc
Confidence 9999955443
No 444
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=2.5e-16 Score=193.24 Aligned_cols=250 Identities=18% Similarity=0.164 Sum_probs=177.7
Q ss_pred hhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhcc---CCCccceeceeeecCCCce
Q 000859 944 ATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIR---HRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 944 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~~ 1020 (1251)
....|.+.+.+|+|+||+||+|...+|+.||+|+=+.... -+|.-=.+++.+++ -+.|..+..++.- ....
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~----WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~--~~~S 769 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP----WEFYICLQVMERLKPQMLPSIMHISSAHVF--QNAS 769 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc----eeeeehHHHHHhhchhhhcchHHHHHHHcc--CCcc
Confidence 4456788889999999999999877799999998653332 12222333444444 2344444443322 3345
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec-------CCCC
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD-------SNME 1093 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-------~~~~ 1093 (1251)
++|+||.+.|+|.+++.. .+.++|...+.++.|+++.+++||.. +|||+||||+|+|+. ....
T Consensus 770 ~lv~ey~~~Gtlld~~N~-------~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINT-------NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred eeeeeccccccHHHhhcc-------CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 899999999999999984 46789999999999999999999999 999999999999994 2345
Q ss_pred eEEcccccccccccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHH
Q 000859 1094 AHLGDFGLAKALVEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWV 1173 (1251)
Q Consensus 1094 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~ 1173 (1251)
++|+|||.+..+.--. ....-....+|-.+-.+|...++.+++++|-|.++.+++-|+.|+.-- .
T Consensus 840 l~lIDfG~siDm~lfp--~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--~----------- 904 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFP--DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--V----------- 904 (974)
T ss_pred eEEEecccceeeeEcC--CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--h-----------
Confidence 8999999987653211 111223457788999999999999999999999999999999887431 0
Q ss_pred HHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcC
Q 000859 1174 EMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLLNVFN 1236 (1251)
Q Consensus 1174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~~~~ 1236 (1251)
.......+...++ ++ ...+.+.+++..+|+.|-..=|...++...+++++.
T Consensus 905 -------~~g~~~~~~~~~~-Ry----~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 905 -------KNGSSWMVKTNFP-RY----WKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred -------cCCcceeccccch-hh----hhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 0000001111111 11 112235577777888666666888888888887764
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.66 E-value=6e-16 Score=167.37 Aligned_cols=142 Identities=19% Similarity=0.202 Sum_probs=109.8
Q ss_pred CCCcCceecccCCceEEEEE--ecCCcEEEEEEeccCCch-----------------------hhhHHHHHHHHHHHhcc
Q 000859 947 NLSDEFIIGSGGSGTVYKAE--LANGATVAVKKISCKDDH-----------------------LLNKSFTREVKTLGRIR 1001 (1251)
Q Consensus 947 ~~~~~~~lG~G~fg~V~~~~--~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 1001 (1251)
.|.+.+.||+|+||.||+|. ..+|+.||||+++..... .....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999997 568999999998743210 01234578999999997
Q ss_pred CC--CccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eee
Q 000859 1002 HR--HLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPK-ILH 1078 (1251)
Q Consensus 1002 h~--niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH 1078 (1251)
+. .+.+.+++ . ..++||||++++++..+... .......+...++.|++.+++|||+. + |+|
T Consensus 109 ~~~i~~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~-------~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH 172 (237)
T smart00090 109 EAGVPVPKPIAW---R---RNVLVMEFIGGDGLPAPRLK-------DVEPEEEEEFELYDDILEEMRKLYKE---GELVH 172 (237)
T ss_pred hcCCCCCeeeEe---c---CceEEEEEecCCcccccccc-------cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEe
Confidence 53 34444432 1 23799999999888766432 12345566789999999999999999 8 999
Q ss_pred cCCCCCCeeecCCCCeEEccccccccc
Q 000859 1079 RDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1079 ~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|||||+||+++ ++.++++|||.|...
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999999 889999999998653
No 446
>PLN03150 hypothetical protein; Provisional
Probab=99.64 E-value=4.5e-16 Score=192.15 Aligned_cols=152 Identities=32% Similarity=0.520 Sum_probs=117.7
Q ss_pred cCCCHHhHHHHHHHHHHcCCCCCCCCCCCCCCCCCCC----ccccEEEcCC--C--CeEEEeccCCccCCCCCCCCCCCC
Q 000859 23 VLCKDEELSVLLEIKKSFTADPENVLHAWNQSNQNLC----TWRGITCGSS--S--ARVVSLNLSGLSLAGSISPSLGRL 94 (1251)
Q Consensus 23 ~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~c----~w~gv~C~~~--~--~~v~~l~l~~~~l~g~~~~~l~~l 94 (1251)
..+.+.|..||++||+++. +|. ..+|+++ .|| .|.||.|+.. . .+|+.|+|+++++.|.+|+.++.+
T Consensus 367 ~~t~~~~~~aL~~~k~~~~-~~~--~~~W~g~--~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLG-LPL--RFGWNGD--PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred cccCchHHHHHHHHHHhcC-Ccc--cCCCCCC--CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCC
Confidence 4567889999999999995 443 2489642 332 7999999532 2 368888888888888888888888
Q ss_pred CcccEEEccCCCCCCCcCccccccCcccEEecccccccCCCCcccCCCccccEEEeccCCCCCCCCCccccc-ccccccc
Q 000859 95 QSLIHLDLSSNSLTGPIPTALSNLSSLESLLLFSNQLAGTIPTQLGSLTSLRVMRIGDNWLSGSIPTSFGNL-VNLGTLG 173 (1251)
Q Consensus 95 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~ 173 (1251)
++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|++|.++|.+|..++.+ .++..++
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~ 521 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEE
Confidence 888888888888888888888888888888888888888888888888888888888888888888777653 3455555
Q ss_pred cccCCC
Q 000859 174 LASCSL 179 (1251)
Q Consensus 174 L~~n~l 179 (1251)
+.+|..
T Consensus 522 ~~~N~~ 527 (623)
T PLN03150 522 FTDNAG 527 (623)
T ss_pred ecCCcc
Confidence 555543
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.63 E-value=2e-15 Score=160.24 Aligned_cols=138 Identities=19% Similarity=0.183 Sum_probs=108.2
Q ss_pred cCCCcCceecccCCceEEEEEecCCcEEEEEEeccCCch---------------------hhhHHHHHHHHHHHhccCCC
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDH---------------------LLNKSFTREVKTLGRIRHRH 1004 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~h~n 1004 (1251)
..|...+.||+|+||.||+|...+|+.||||++...... .....+.+|..++..+.|++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred chhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 346777899999999999998888999999987643210 01123677899999998874
Q ss_pred --ccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 000859 1005 --LVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIK 1082 (1251)
Q Consensus 1005 --iv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 1082 (1251)
++..++. ...++||||+++++|.+.... ....+++.+++.++.++|+. +|+|||||
T Consensus 95 i~v~~~~~~------~~~~lv~e~~~g~~L~~~~~~-------------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~ 152 (198)
T cd05144 95 FPVPKPIDW------NRHAVVMEYIDGVELYRVRVL-------------EDPEEVLDEILEEIVKAYKH---GIIHGDLS 152 (198)
T ss_pred CCCCceeec------CCceEEEEEeCCcchhhcccc-------------ccHHHHHHHHHHHHHHHHHC---CCCcCCCC
Confidence 4444431 234899999999988765321 23457889999999999998 99999999
Q ss_pred CCCeeecCCCCeEEccccccccc
Q 000859 1083 SSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1083 p~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
|+||++++++.++|+|||.+...
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cccEEEcCCCcEEEEECCccccC
Confidence 99999999999999999999654
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=1.7e-16 Score=189.55 Aligned_cols=214 Identities=24% Similarity=0.334 Sum_probs=144.7
Q ss_pred hcCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEE
Q 000859 945 TNNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLI 1023 (1251)
Q Consensus 945 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv 1023 (1251)
..+|..++.|-.|+||.||..+++ +.+++|+|+ .++.. |+ +||..+.| ..+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l------------il-----Rnilt~a~--------npfvv 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL------------IL-----RNILTFAG--------NPFVV 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch------------hh-----hccccccC--------Cccee
Confidence 356888899999999999999654 567888843 22111 11 12333222 11222
Q ss_pred EeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1024 YEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1024 ~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
||-...++.. +.++. +++.+++|+|+. +|+|||+||+|.+|+.-|.+|++|||+++
T Consensus 136 ------gDc~tllk~~-------g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 136 ------GDCATLLKNI-------GPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred ------chhhhhcccC-------CCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhh
Confidence 3434444431 23332 227899999999 99999999999999999999999999987
Q ss_pred ccccccCCC-----------CcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHH
Q 000859 1104 ALVEDYNSN-----------TESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRW 1172 (1251)
Q Consensus 1104 ~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~ 1172 (1251)
+........ .-.....+||+.|+|||++....|+..+|+|++|+++||.+.|+.||.+..+.+.-- ..
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg-~v 270 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG-QV 270 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh-hh
Confidence 643221110 011223689999999999999999999999999999999999999998875543211 11
Q ss_pred HHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1173 VEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
+... ..+. ...+..+++.++++.+.++.+|.+|--..
T Consensus 271 isd~----i~wp------------E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 271 ISDD----IEWP------------EEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred hhhh----cccc------------ccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 1110 0111 11233456788999999999999994333
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=2.8e-16 Score=176.34 Aligned_cols=176 Identities=27% Similarity=0.433 Sum_probs=130.8
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGD 1098 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 1098 (1251)
+.++.|++++..+|.+|+.+.+. ...-++..+..++.|++.|++| + +.+|+|+||.||+...+..+||.|
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~----~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT----GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc----ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 36899999999999999975432 4567888999999999999999 6 899999999999999999999999
Q ss_pred cccccccccccC--CCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHH
Q 000859 1099 FGLAKALVEDYN--SNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1099 fG~a~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
||+......... .....++...||..||+||.+.+..|+.++||||+|++++|+++ -..++.-.
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------------- 466 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------------- 466 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-------------
Confidence 999877644321 11223455789999999999999999999999999999999986 23222110
Q ss_pred HHhccchhhhhhhcccCCCCCCch-HHHHHHHHHHHHHccccCCCCCCCHHHH
Q 000859 1176 HMEMSGSAREELLDDQMKPLLPGE-ECAAYQVLEIALQCTKTSPQERPSSRQV 1227 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~ei 1227 (1251)
.....+.+ ..+|+. ....++=+.++.++++..|.+||++.+.
T Consensus 467 ------~t~~d~r~----g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 467 ------ATLTDIRD----GIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ------Hhhhhhhc----CCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 00111111 112211 1111234579999999999999955443
No 450
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=6e-15 Score=158.82 Aligned_cols=135 Identities=22% Similarity=0.328 Sum_probs=110.8
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCch-------hhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEE
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDH-------LLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIY 1024 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~ 1024 (1251)
+.||+|++|.||+|.+ +|..|+||+....... .....+.+|++++..+.|++++....++... ...+++|
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--ENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--CCCEEEE
Confidence 4799999999999987 5788999986543211 1234678899999999999987766665443 3458999
Q ss_pred eecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1025 EYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1025 E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
||++|++|.+++.... + ++..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.++.
T Consensus 79 e~~~G~~L~~~~~~~~----------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNG----------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhcc----------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999986521 2 7789999999999999999 999999999999999 78999999998854
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.58 E-value=6.1e-15 Score=180.71 Aligned_cols=146 Identities=21% Similarity=0.292 Sum_probs=112.7
Q ss_pred CHHHHHHhhcCCCcCceecccCCceEEEEEecCCcEEEEEEeccCC-------chhhhHHHHHHHHHHHhccCCCcccee
Q 000859 937 RWEDIMGATNNLSDEFIIGSGGSGTVYKAELANGATVAVKKISCKD-------DHLLNKSFTREVKTLGRIRHRHLVKLM 1009 (1251)
Q Consensus 937 ~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~ 1009 (1251)
+|.........|...+.||+|+||+||+|.+... .+++|+...+. .....+.+.+|+++++.++|++++...
T Consensus 324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred eeccccccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 3444444445556778999999999999987644 44444432111 112235688999999999999998877
Q ss_pred ceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeec
Q 000859 1010 GHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLD 1089 (1251)
Q Consensus 1010 g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 1089 (1251)
.++... ...++||||+++++|.+++. ....++.+++++++|||+. +++|||+||+||++
T Consensus 403 ~~~~~~--~~~~lv~E~~~g~~L~~~l~---------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl- 461 (535)
T PRK09605 403 IYDVDP--EEKTIVMEYIGGKDLKDVLE---------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV- 461 (535)
T ss_pred EEEEeC--CCCEEEEEecCCCcHHHHHH---------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-
Confidence 666543 33589999999999999875 2457899999999999999 99999999999999
Q ss_pred CCCCeEEcccccccc
Q 000859 1090 SNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1090 ~~~~~kl~DfG~a~~ 1104 (1251)
+++.++|+|||+++.
T Consensus 462 ~~~~~~liDFGla~~ 476 (535)
T PRK09605 462 RDDRLYLIDFGLGKY 476 (535)
T ss_pred ECCcEEEEeCccccc
Confidence 678999999999865
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.58 E-value=9.9e-15 Score=155.50 Aligned_cols=131 Identities=22% Similarity=0.341 Sum_probs=104.3
Q ss_pred eecccCCceEEEEEecCCcEEEEEEeccCCc-------hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 953 IIGSGGSGTVYKAELANGATVAVKKISCKDD-------HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.||+|+||.||+|.+ +|..|++|+...... ....+.+.+|+++++.++|+++.....++... ...++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEEE
Confidence 389999999999986 478999998653321 11235677899999999988755444444333 33589999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|++|++|.+++.... . .++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.++.
T Consensus 78 ~~~g~~l~~~~~~~~-------~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN-------D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcH-------H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999876421 0 7899999999999999 999999999999999 89999999998854
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=5.5e-16 Score=173.10 Aligned_cols=173 Identities=31% Similarity=0.481 Sum_probs=125.0
Q ss_pred cEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCC
Q 000859 650 SHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGN 729 (1251)
Q Consensus 650 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 729 (1251)
...||+.|++. .+|..+..+..|..+.|.+|.+.. +|..+.++..|..|||+.|+++ .+|..+..|+ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~-ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRT-IPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhcccee-cchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 34566666666 566666666667777777777664 5667777777777777777776 5666666554 677777777
Q ss_pred cCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCc
Q 000859 730 LLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELP 809 (1251)
Q Consensus 730 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 809 (1251)
+++ .+|+.++.+++|..||.+.|.+. .+|..++.|..|+. |+++.|++. .+|+++..|+ |..||+|.|+++ .||
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~-l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iP 227 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRD-LNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLP 227 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHH-HHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecc
Confidence 776 67777777777777777777776 56777777777754 777778877 6777777654 778888888887 778
Q ss_pred hhhhhccCCCcEeeccccCcCcc
Q 000859 810 SQLGEMSSLGKLNLSYNDLQGKL 832 (1251)
Q Consensus 810 ~~l~~l~~L~~L~l~~N~l~~~~ 832 (1251)
-.|.+|..|+.|-|.+|||+.++
T Consensus 228 v~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hhhhhhhhheeeeeccCCCCCCh
Confidence 88888888888888888887544
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=1.7e-15 Score=169.35 Aligned_cols=196 Identities=30% Similarity=0.440 Sum_probs=173.2
Q ss_pred ccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccccccccce
Q 000859 620 GKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLV 699 (1251)
Q Consensus 620 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 699 (1251)
..+..-...||+.|++. ++|..+..+..|+.+.|..|.+- .+|..++.+..|+.|||+.|++.. +|..++.|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~-lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSH-LPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhc-CChhhhcCc-cee
Confidence 44556677899999998 89999999999999999999998 889999999999999999999985 788888877 999
Q ss_pred eeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCc
Q 000859 700 LSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNN 779 (1251)
Q Consensus 700 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~ 779 (1251)
|-+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|.+++.|+-. + ||+|+|+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi-~-lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLI-R-LDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCcee-e-eecccCc
Confidence 999999999 89999999999999999999998 79999999999999999999998 578888888755 4 8999999
Q ss_pred ccCCCCCCcCccccccEEEccCCccccCCchhhhhccC---CCcEeeccc
Q 000859 780 FTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEMSS---LGKLNLSYN 826 (1251)
Q Consensus 780 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~---L~~L~l~~N 826 (1251)
++ .+|.+|.+|+.|++|-|.+|.|. .-|..+...=. .++|+..-.
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 99 89999999999999999999998 67888765433 345555555
No 455
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.48 E-value=1.6e-13 Score=144.63 Aligned_cols=136 Identities=22% Similarity=0.247 Sum_probs=97.6
Q ss_pred CceecccCCceEEEEEecCCcEEEEEEeccCCchh-hhHH----------------------HHHHHHHHHhccCCC--c
Q 000859 951 EFIIGSGGSGTVYKAELANGATVAVKKISCKDDHL-LNKS----------------------FTREVKTLGRIRHRH--L 1005 (1251)
Q Consensus 951 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~-~~~~----------------------~~~E~~~l~~l~h~n--i 1005 (1251)
.+.||+|+||+||+|...++++||||++....... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999987789999999986432110 1111 135666666664433 4
Q ss_pred cceeceeeecCCCceeEEEeecCCCChHHh-hhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCC
Q 000859 1006 VKLMGHCCNKGAGSNLLIYEYMENGSVWDW-LHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHH-DCVPKILHRDIKS 1083 (1251)
Q Consensus 1006 v~l~g~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp 1083 (1251)
.+.++. ...++||||++++++... +... ... .++..++.+++.++.++|. . +|+|||+||
T Consensus 82 ~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~--------~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p 143 (187)
T cd05119 82 PKPIDL------NRHVLVMEFIGGDGIPAPRLKDV--------RLL-EDPEELYDQILELMRKLYREA---GLVHGDLSE 143 (187)
T ss_pred CceEec------CCCEEEEEEeCCCCccChhhhhh--------hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCCh
Confidence 444432 124899999998654321 1111 001 5678899999999999999 7 999999999
Q ss_pred CCeeecCCCCeEEccccccccc
Q 000859 1084 SNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1084 ~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
+||+++ ++.++++|||.+...
T Consensus 144 ~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 144 YNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred hhEEEE-CCcEEEEECcccccc
Confidence 999999 999999999999654
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=4.6e-15 Score=180.03 Aligned_cols=257 Identities=25% Similarity=0.292 Sum_probs=188.9
Q ss_pred cCCCcCceecccCCceEEEEEec--CCcEEEEEEeccCC-chhhhHHHHHHHHHHHhcc-CCCccceeceeeecCCCcee
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA--NGATVAVKKISCKD-DHLLNKSFTREVKTLGRIR-HRHLVKLMGHCCNKGAGSNL 1021 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~ 1021 (1251)
..|...+.||+|+|+.|-.+... ....+|+|.+.... .....+....|..+-+.+. |+|++.+++.. ..+...+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~--~~~~~~~ 97 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS--SSPRSYL 97 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc--CCCcccc
Confidence 34666777999999999988543 34567777765443 2333445556888777776 99999999865 3455678
Q ss_pred EEEeecCCCChHHhh-hcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeecCCCCCCeeecCCC-CeEEcc
Q 000859 1022 LIYEYMENGSVWDWL-HKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLH-HDCVPKILHRDIKSSNILLDSNM-EAHLGD 1098 (1251)
Q Consensus 1022 lv~E~~~~gsL~~~l-~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dlkp~Nill~~~~-~~kl~D 1098 (1251)
++.||.++|++.+-+ +.. ....+...+..++.|+..++.|+| .. +++|||+||+|.+++..+ ..+++|
T Consensus 98 ~~~~~s~g~~~f~~i~~~~------~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~d 168 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPD------STGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIAD 168 (601)
T ss_pred cccCcccccccccccccCC------ccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCC
Confidence 999999999998877 331 224556667789999999999999 77 999999999999999999 999999
Q ss_pred cccccccccccCCCCcccceeec-ccceecccccccC-CCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHHH
Q 000859 1099 FGLAKALVEDYNSNTESNTWFAG-SYGYIAPEYAYSL-KATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEMH 1176 (1251)
Q Consensus 1099 fG~a~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 1176 (1251)
||+|..+... ...........| ++.|+|||...+. ......|+||.|+++.-+++|..|++...........|.+..
T Consensus 169 f~~At~~~~~-~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~ 247 (601)
T KOG0590|consen 169 FGLATAYRNK-NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK 247 (601)
T ss_pred chhhcccccc-CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc
Confidence 9999877542 122223334567 9999999998874 456789999999999999999999976654443333332211
Q ss_pred HhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1177 MEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
................++..+++..+|+.|.+.+++..
T Consensus 248 ---------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 ---------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ---------------cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00011122233445678889999999999999998754
No 457
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.48 E-value=3.6e-13 Score=146.17 Aligned_cols=138 Identities=19% Similarity=0.245 Sum_probs=106.4
Q ss_pred Cceec-ccCCceEEEEEecCCcEEEEEEeccCC------------chhhhHHHHHHHHHHHhccCCCc--cceeceeeec
Q 000859 951 EFIIG-SGGSGTVYKAELANGATVAVKKISCKD------------DHLLNKSFTREVKTLGRIRHRHL--VKLMGHCCNK 1015 (1251)
Q Consensus 951 ~~~lG-~G~fg~V~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~~ 1015 (1251)
...|| .|+.|+||.+... +..+|||.+.... .......+.+|++++++++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 34788 9999999999775 7889999885321 11233567889999999998775 6677654433
Q ss_pred CCC--ceeEEEeecCC-CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC
Q 000859 1016 GAG--SNLLIYEYMEN-GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM 1092 (1251)
Q Consensus 1016 ~~~--~~~lv~E~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 1092 (1251)
... ..++|||++++ .+|.+++... .++.. .+.+++.+++++|+. ||+||||||+|||++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 222 12599999997 6899888642 23433 356899999999999 999999999999999999
Q ss_pred CeEEcccccccc
Q 000859 1093 EAHLGDFGLAKA 1104 (1251)
Q Consensus 1093 ~~kl~DfG~a~~ 1104 (1251)
.++|+|||.++.
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998865
No 458
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.46 E-value=5.3e-13 Score=135.37 Aligned_cols=135 Identities=21% Similarity=0.226 Sum_probs=110.2
Q ss_pred cCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccC--CCccceeceeeecCCCceeEEEeec
Q 000859 950 DEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRH--RHLVKLMGHCCNKGAGSNLLIYEYM 1027 (1251)
Q Consensus 950 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~~~lv~E~~ 1027 (1251)
+.+.+|+|.++.||++... +..+++|....... ...+.+|+.+++.++| ..++++++++... ...++++||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESD--GWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEec-CCeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CccEEEEEec
Confidence 3467999999999999875 47899999864433 4678899999999976 5888888766433 4579999999
Q ss_pred CCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1028 ENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1028 ~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.++.
T Consensus 76 ~g~~~~~~--------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV--------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC--------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 88766443 4566678899999999999996444799999999999999989999999998854
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.42 E-value=1.6e-13 Score=169.74 Aligned_cols=107 Identities=39% Similarity=0.627 Sum_probs=75.6
Q ss_pred CCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEc
Q 000859 720 SLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNL 799 (1251)
Q Consensus 720 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 799 (1251)
.++.|+|++|.+++.+|..++.+++|+.|+|++|++.|.+|..++.+++|+. |+|++|+++|.+|+.++.|++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~-LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEV-LDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE-EECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 3667788888888777877877888888888888777777777777777753 777777777777777777777777777
Q ss_pred cCCccccCCchhhhhc-cCCCcEeecccc
Q 000859 800 SHNQLVGELPSQLGEM-SSLGKLNLSYND 827 (1251)
Q Consensus 800 ~~N~l~~~~p~~l~~l-~~L~~L~l~~N~ 827 (1251)
++|+++|.+|..+..+ .++..+++++|+
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCc
Confidence 7777777777776553 234444444443
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.42 E-value=3.8e-13 Score=159.66 Aligned_cols=243 Identities=34% Similarity=0.418 Sum_probs=175.3
Q ss_pred ceeeecccCccccCCCCCCCCcc-cCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccCCccEEEcC
Q 000859 577 FLSFDVTNNEFDHEIPPQLGNSP-SLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLN 655 (1251)
Q Consensus 577 l~~l~l~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 655 (1251)
+..+++.+|.+. .+|+...... +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|.....+++|+.|+++
T Consensus 118 l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls 194 (394)
T COG4886 118 LTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194 (394)
T ss_pred eeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheecc
Confidence 333444444443 4556566663 8888888888876 45556778888888888888888 566666677888888888
Q ss_pred CCccCCCCccccCCCcccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCC
Q 000859 656 NNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPI 735 (1251)
Q Consensus 656 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 735 (1251)
+|+++ .+|...+.+..|++|.+++|.+.. .+..+.+++++..|.+++|++. .++..++.++++++|++++|+++ .+
T Consensus 195 ~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~-~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i 270 (394)
T COG4886 195 GNKIS-DLPPEIELLSALEELDLSNNSIIE-LLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SI 270 (394)
T ss_pred CCccc-cCchhhhhhhhhhhhhhcCCccee-cchhhhhcccccccccCCceee-eccchhccccccceecccccccc-cc
Confidence 88888 667766667779999999995443 5777888899999999999987 55788899999999999999998 45
Q ss_pred CcccccccccceeeccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhc
Q 000859 736 PPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEM 815 (1251)
Q Consensus 736 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 815 (1251)
+. ++.+.+++.|++++|.+...+|.........+. ... +.++ ..+........+...++..|..+ ..|..+...
T Consensus 271 ~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~~~~~~~--~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 344 (394)
T COG4886 271 SS-LGSLTNLRELDLSGNSLSNALPLIALLLLLLEL--LLN-LLLT-LKALELKLNSILLNNNILSNGET-SSPEALSIL 344 (394)
T ss_pred cc-ccccCccCEEeccCccccccchhhhccchhHHh--hhh-hhhh-ccccccccccccccccccccccc-ccchhhccc
Confidence 55 888999999999999998777766555444332 222 4444 23344444555666777777776 667777777
Q ss_pred cCCCcEeeccccCcCcc
Q 000859 816 SSLGKLNLSYNDLQGKL 832 (1251)
Q Consensus 816 ~~L~~L~l~~N~l~~~~ 832 (1251)
..+..++...+......
T Consensus 345 ~~~~~~~~~~~~~~~~~ 361 (394)
T COG4886 345 ESLNNLWTLDNALDESN 361 (394)
T ss_pred ccccCceecccccccch
Confidence 77777777777665433
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.36 E-value=9.8e-13 Score=156.15 Aligned_cols=197 Identities=35% Similarity=0.514 Sum_probs=98.5
Q ss_pred eEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccccccc-cCCeeecCCCcCcccCCcchhccchhhhhhccCC
Q 000859 460 WIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASLGNCH-QLIILDLADNKLSGGVPASFGFLQALEQLMLYNN 538 (1251)
Q Consensus 460 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 538 (1251)
.++++.|.+. ..+..+..++.++.|++.+|.++ .+|......+ +|+.|++++|++. .+|..++.++.|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555553 22223344455555555555555 3444444442 5555555555554 33334455555555555555
Q ss_pred ccccCCchhhhhhcCCCeeecccccccccccccccCccceeeecccCccccCCCCCCCCcccCceeecccCccccccCcc
Q 000859 539 SLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWT 618 (1251)
Q Consensus 539 ~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 618 (1251)
+++ .+|.....+++|+.|++++|+++ .+|........|++|.+++|++. ..+..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~------------------------~l~~~~~~~~~L~~l~~~~N~~~-~~~~~ 227 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS------------------------DLPPEIELLSALEELDLSNNSII-ELLSS 227 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc------------------------cCchhhhhhhhhhhhhhcCCcce-ecchh
Confidence 555 23333334445555555555544 23333333344556666666432 34444
Q ss_pred cccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCc
Q 000859 619 FGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLP 688 (1251)
Q Consensus 619 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 688 (1251)
+..+.++..+.+++|++. ..+..+..+.+++.|++++|.++.. +. ++.+.+|+.|++++|.+....|
T Consensus 228 ~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 228 LSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhhcccccccccCCceee-eccchhccccccceecccccccccc-cc-ccccCccCEEeccCccccccch
Confidence 555555666666666555 2345555555566666666666532 22 5555666666666666555433
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.31 E-value=7.9e-12 Score=147.61 Aligned_cols=142 Identities=20% Similarity=0.244 Sum_probs=100.5
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCchhhh---------------------------------------HHHHH
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLN---------------------------------------KSFTR 992 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~---------------------------------------~~~~~ 992 (1251)
+.||.|++|.||+|+.++|+.||||+.+........ -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 579999999999999999999999998644211100 12445
Q ss_pred HHHHHHhcc----CCCccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHH-HHHH
Q 000859 993 EVKTLGRIR----HRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQ-GVEY 1067 (1251)
Q Consensus 993 E~~~l~~l~----h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~-~l~~ 1067 (1251)
|++.+.++. |..-+.+-.++.+. ....++||||++|+++.++..... ... ...+++.+++. .+..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~------~~~---~~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDE------AGL---DRKALAENLARSFLNQ 272 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHh------cCC---CHHHHHHHHHHHHHHH
Confidence 666555552 33333333333322 223589999999999988765321 111 23456666666 4678
Q ss_pred hhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccc
Q 000859 1068 LHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALV 1106 (1251)
Q Consensus 1068 LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 1106 (1251)
+|.. |++|+|++|.||+++.+++++++|||++..+.
T Consensus 273 l~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8988 99999999999999999999999999997664
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=8.4e-12 Score=131.11 Aligned_cols=207 Identities=23% Similarity=0.314 Sum_probs=140.7
Q ss_pred HHhccCCCccceeceeeecCC---CceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 000859 997 LGRIRHRHLVKLMGHCCNKGA---GSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCV 1073 (1251)
Q Consensus 997 l~~l~h~niv~l~g~~~~~~~---~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 1073 (1251)
+-.+.|.|+|+++.|+.+... ....+++|||..|++..+|++.. .....+....-.+++.||..||.|||+. .
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~---~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTK---KNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHH---HhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 444579999999998875432 23578999999999999998753 2345677778889999999999999994 7
Q ss_pred CCeeecCCCCCCeeecCCCCeEEcccccccccccccCC-CCcccceeecccceecccccccCCCCCccceeehhHHHHHH
Q 000859 1074 PKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNS-NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMEL 1152 (1251)
Q Consensus 1074 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el 1152 (1251)
|.|+|+++..+-|++..+|-+|++--.-. .+...... ....+....+-++|.|||+-.....+.++|||+||....||
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 89999999999999999999998632111 00000000 01111123456889999987777788899999999999999
Q ss_pred hhCCCCCC-CccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 000859 1153 VSGKMPTD-ATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLL 1231 (1251)
Q Consensus 1153 ~tg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 1231 (1251)
..+..--. +....+. ++.+.......- ...=+.++.+|++..|..||+|++++...
T Consensus 276 ailEiq~tnseS~~~~-----------------ee~ia~~i~~le------n~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEV-----------------EENIANVIIGLE------NGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHheeccCCCcceeeh-----------------hhhhhhheeecc------CccccCcCcccccCCCCCCcchhhhhcCc
Confidence 88765421 1111100 000000000000 00112577889999999999999987543
No 464
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.7e-12 Score=141.53 Aligned_cols=208 Identities=26% Similarity=0.311 Sum_probs=141.4
Q ss_pred ccccccceEEccCCcccCCCC--ccccccCCccEEEcCCCccCC--CCccccCCCcccccccccCccccCCCcccc-ccc
Q 000859 620 GKIRELSLLDLSGNSLTGPIP--TQLLMCKKLSHIDLNNNLLSG--AVPSWLGTLPQLGELKLSFNQFVGFLPREL-FNC 694 (1251)
Q Consensus 620 ~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l 694 (1251)
.++.+|+.+.|.+..+.. .+ .....|++++.||||.|.++. .+-....+||+|+.|+|+.|++..+..... ..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 445667777777666652 22 345677888888888888873 334455789999999999999885433322 357
Q ss_pred cccceeeccCcccccc-cCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccc-hhhhchhhHHHH
Q 000859 695 SKLLVLSLDGNMLNGS-LPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIP-LEIGQLQNLQSI 772 (1251)
Q Consensus 695 ~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~l~~~ 772 (1251)
++|+.|.|++|.|+-. +-.....+|+|+.|+|+.|.....-.....-+..|++|||++|++....- ...+.++.|. .
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~-~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLN-Q 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchh-h
Confidence 8899999999999721 22334568999999999995332333334556789999999998864321 3466777774 4
Q ss_pred HhccCCcccC-CCCCC-----cCccccccEEEccCCccccC-CchhhhhccCCCcEeeccccCc
Q 000859 773 LDLSHNNFTG-QIPPS-----MGTLAKLEVLNLSHNQLVGE-LPSQLGEMSSLGKLNLSYNDLQ 829 (1251)
Q Consensus 773 L~l~~N~l~~-~~p~~-----~~~l~~L~~L~l~~N~l~~~-~p~~l~~l~~L~~L~l~~N~l~ 829 (1251)
|+++.+.|++ .+|+. ...+++|++|++++|+|... .-..+..+++|+.|.+..|+|.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 7888888874 33444 35677888888888888631 2234556666777776666664
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.21 E-value=2.8e-12 Score=132.46 Aligned_cols=133 Identities=27% Similarity=0.375 Sum_probs=73.0
Q ss_pred cCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceec
Q 000859 646 CKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLT 725 (1251)
Q Consensus 646 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 725 (1251)
++.|+.+|||+|.|+ .+.+.+.-+|.++.|++|+|.++.+ ..+..+.+|+.|||++|.++ .+..+-..+-+.++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 344444444444444 3444444455555555555555532 23445555555555555555 3334444555566666
Q ss_pred cCCCcCCCCCCcccccccccceeeccCccccccc-chhhhchhhHHHHHhccCCcccCCCCC
Q 000859 726 LSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVI-PLEIGQLQNLQSILDLSHNNFTGQIPP 786 (1251)
Q Consensus 726 ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~l~~~L~l~~N~l~~~~p~ 786 (1251)
|++|.|.. -..++++.+|..||+++|++.... -..||+|+.|+ ++.|.+|.+.+ +|+
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE-~l~L~~NPl~~-~vd 416 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLE-TLRLTGNPLAG-SVD 416 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHH-HHhhcCCCccc-cch
Confidence 66666542 134556666667777777665332 24577777774 47777777773 443
No 466
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.13 E-value=2.2e-10 Score=118.55 Aligned_cols=129 Identities=19% Similarity=0.149 Sum_probs=94.9
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCcc-ceeceeeecCCCceeEEEeecCCC
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLV-KLMGHCCNKGAGSNLLIYEYMENG 1030 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~~~lv~E~~~~g 1030 (1251)
+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.+++ +++++. . ...++||||+++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~--~~~~lv~e~i~G~ 76 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--P--ETGVLITEFIEGS 76 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--C--CCCeEEEEecCCC
Confidence 46899999999999875 78899999754332 224567899999998665544 444432 2 2247999999998
Q ss_pred ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeecCCCCCCeeecCCCCeEEccccccc
Q 000859 1031 SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDC--VPKILHRDIKSSNILLDSNMEAHLGDFGLAK 1103 (1251)
Q Consensus 1031 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 1103 (1251)
++.+. . ......+.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 77 ~l~~~-~--------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 77 ELLTE-D--------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccccc-c--------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 76542 0 011245678999999999982 12369999999999999 6789999999874
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=6.8e-11 Score=136.47 Aligned_cols=250 Identities=22% Similarity=0.241 Sum_probs=176.2
Q ss_pred CCcCceecc--cCCceEEEEEe---cCCcEEEEEEeccCCc-hhhhHHHHHHHHHHHhc-cCCCccceeceeeecCCCce
Q 000859 948 LSDEFIIGS--GGSGTVYKAEL---ANGATVAVKKISCKDD-HLLNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAGSN 1020 (1251)
Q Consensus 948 ~~~~~~lG~--G~fg~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 1020 (1251)
+...+.+|. |.+|.||.+.. .++..+|+|+-+.... ......=.+|+...+++ .|++.++.+..+.. .+..
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~--~~~l 193 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG--SGIL 193 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc--CCcc
Confidence 445567899 99999999955 5688899998433322 22223335677777777 59999997776643 4445
Q ss_pred eEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHH----HHHHhhhcCCCCeeecCCCCCCeeecCC-CCeE
Q 000859 1021 LLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQ----GVEYLHHDCVPKILHRDIKSSNILLDSN-MEAH 1095 (1251)
Q Consensus 1021 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~k 1095 (1251)
++-+|++. .++..+.+.. ...++....+....+..+ |+.++|.. .++|-|+||.||+...+ ..++
T Consensus 194 fiqtE~~~-~sl~~~~~~~------~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~ 263 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTP------CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCK 263 (524)
T ss_pred eeeecccc-chhHHhhhcc------cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceee
Confidence 78888885 7898888764 345777788888888888 99999999 99999999999999999 8899
Q ss_pred EcccccccccccccCCCCcc-cceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHH
Q 000859 1096 LGDFGLAKALVEDYNSNTES-NTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVE 1174 (1251)
Q Consensus 1096 l~DfG~a~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 1174 (1251)
++|||+...+.+........ .....|...|++||... ..++..+|+|++|.++.+..+|..+...... ..|.+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-----~~W~~ 337 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-----SSWSQ 337 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-----CCccc
Confidence 99999998776543222211 12236788999999765 4688899999999999999998766532200 11111
Q ss_pred HHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 000859 1175 MHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 1229 (1251)
.... ....+. .+....++...+..+++.+|-.|++++.+.+
T Consensus 338 ~r~~---~ip~e~-----------~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 LRQG---YIPLEF-----------CEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccc---cCchhh-----------hcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1000 000000 1112344556888999999999999998764
No 468
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.13 E-value=2.1e-10 Score=136.64 Aligned_cols=147 Identities=18% Similarity=0.189 Sum_probs=93.1
Q ss_pred cCCCcCceecccCCceEEEEEecC-CcEEEEEEeccCCchh---------------------------------hhH---
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELAN-GATVAVKKISCKDDHL---------------------------------LNK--- 988 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~---------------------------------~~~--- 988 (1251)
..|+. +.||+|++|.||+|+.++ |+.||||+.+....+. ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 44665 689999999999998877 9999999997442110 011
Q ss_pred ---HHHHHHHHHHhcc----CCCccceeceeeecCCCceeEEEeecCCCChHHhh--hcCCCCcccCCCCCHHHHHHHHH
Q 000859 989 ---SFTREVKTLGRIR----HRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWL--HKQPVNIKMRKSLDWEARLKIAV 1059 (1251)
Q Consensus 989 ---~~~~E~~~l~~l~----h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l--~~~~~~~~~~~~l~~~~~~~i~~ 1059 (1251)
++.+|+.-+.+++ +...+.+-.++.+- ....++||||++|+.+.++- .... .....+....+..++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g---~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAG---TDMKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcC---CCHHHHHHHHHHHHHH
Confidence 2334444444442 33333333333222 22358999999999998752 2211 0011122222333334
Q ss_pred HHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC----CeEEccccccccccc
Q 000859 1060 GLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM----EAHLGDFGLAKALVE 1107 (1251)
Q Consensus 1060 ~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~~~~ 1107 (1251)
|+ ... |++|+|+||.||+++.++ +++++|||++..+.+
T Consensus 275 Qi-------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QV-------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 43 345 999999999999999888 999999999877643
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.12 E-value=2.8e-12 Score=136.57 Aligned_cols=241 Identities=23% Similarity=0.278 Sum_probs=129.5
Q ss_pred eEEEeccCCccCCC----CCCCCCCCCCcccEEEccCC---CCCCCcCccc-------cccCcccEEecccccccCCCCc
Q 000859 72 RVVSLNLSGLSLAG----SISPSLGRLQSLIHLDLSSN---SLTGPIPTAL-------SNLSSLESLLLFSNQLAGTIPT 137 (1251)
Q Consensus 72 ~v~~l~l~~~~l~g----~~~~~l~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~L~~n~l~~~~p~ 137 (1251)
.++.|+|+||.+.- .+.+.|.+.+.|+..++|+- .....+|+++ -..++|++||||+|.|...-+.
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~ 110 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR 110 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH
Confidence 46666666666542 23445556666666666652 2222344332 2233455555555554433222
Q ss_pred c----cCCCccccEEEeccCCCCCCCCCcccccccccccccccCCCCCCCCCCcCcccccceeeeccccccCCC----Cc
Q 000859 138 Q----LGSLTSLRVMRIGDNWLSGSIPTSFGNLVNLGTLGLASCSLSGPIPPQFGQLSQLEELILQQNQLQGPI----PA 209 (1251)
Q Consensus 138 ~----l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p~ 209 (1251)
. +.+++.|++|.|.+|.++-.....++. .|..|. .|. -...-++|+++..++|++..-. ..
T Consensus 111 ~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~~~A~ 179 (382)
T KOG1909|consen 111 GLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGATALAE 179 (382)
T ss_pred HHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccHHHHHH
Confidence 2 223344444444444443111111111 122211 111 1223357888888888775322 23
Q ss_pred ccCCCCCCceeeccccccCC----CchhhhcccccCceeeccCccCCCC----CCccccCCCccceeeccCccccCcCCc
Q 000859 210 ELGNCSSLSIFTAAENNLNG----SIPAALGRLQNLQLLNLGNNSLSGE----IPSELGELSQLGYLNLMGNRLEGAIPR 281 (1251)
Q Consensus 210 ~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~ 281 (1251)
.|...+.|+.+.++.|.|.. .+..+|..+++|+.|||.+|-++.. +...+..+++|++|++++|.+......
T Consensus 180 ~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~ 259 (382)
T KOG1909|consen 180 AFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAI 259 (382)
T ss_pred HHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHH
Confidence 45666778888888887753 2345667778888888888877733 234556677778888887777655444
Q ss_pred ccc-----cCCCccEEEeccccccCC----CCCccccccceEEEEccCccc
Q 000859 282 SFA-----KMGNLQSLDLSMNRLTGG----IPEEFGNMGQLVFLVLSNNNI 323 (1251)
Q Consensus 282 ~~~-----~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l 323 (1251)
+|. ..++|++|.|.+|.++.. +...+...+.|+.|+|++|.+
T Consensus 260 a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 260 AFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 432 256777777777777621 222334456666666666666
No 470
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.11 E-value=6.5e-10 Score=129.12 Aligned_cols=170 Identities=18% Similarity=0.251 Sum_probs=127.1
Q ss_pred EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCccc
Q 000859 966 ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKM 1045 (1251)
Q Consensus 966 ~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~ 1045 (1251)
+..++.+|.|...+.... ...+...+-++.++.++||+|++++..+.. .+..|+|+|-+. .|..++++.
T Consensus 33 ~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~--Pl~~~lk~l------ 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEE--EGTLYLVTERVR--PLETVLKEL------ 101 (690)
T ss_pred eeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcc--cCceEEEeeccc--cHHHHHHHh------
Confidence 566789999999876555 455667788999999999999999986644 346799999996 577788763
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcccceeecccce
Q 000859 1046 RKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTESNTWFAGSYGY 1125 (1251)
Q Consensus 1046 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y 1125 (1251)
........++||+.||.|||+.+ +++|++|.-..|+|++.|..||++|-++...... ..+.....--..|
T Consensus 102 ----~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~----~~~~~~~~~~~s~ 171 (690)
T KOG1243|consen 102 ----GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGF----NAPAKSLYLIESF 171 (690)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccC----Ccccccchhhhcc
Confidence 35666778899999999999764 8999999999999999999999999987543211 1011111222345
Q ss_pred ecccccccCCCCCccceeehhHHHHHHhhCCCC
Q 000859 1126 IAPEYAYSLKATEKCDVYSMGIVLMELVSGKMP 1158 (1251)
Q Consensus 1126 ~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p 1158 (1251)
..|+.+.... -..|.|-||+++||++.|..+
T Consensus 172 ~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~~ 202 (690)
T KOG1243|consen 172 DDPEEIDPSE--WSIDSWGLGCLIEELFNGSLL 202 (690)
T ss_pred cChhhcCccc--cchhhhhHHHHHHHHhCcccC
Confidence 6666433222 346999999999999999433
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=1.8e-11 Score=126.50 Aligned_cols=140 Identities=33% Similarity=0.360 Sum_probs=112.6
Q ss_pred cccCcccccccccceEEccCCcccCCCCccccccCCccEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccc
Q 000859 613 GKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCKKLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELF 692 (1251)
Q Consensus 613 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 692 (1251)
|..-..+..+..|+++|||+|.|+ .+.+...-.++++.|++|+|.|. .+ +.+..+++|+.||||+|.++.. ...-.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls~~-~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLAEC-VGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhHhh-hhhHh
Confidence 333344556678999999999998 67888888899999999999997 33 3388999999999999999863 34445
Q ss_pred cccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCC-CCcccccccccceeeccCcccccc
Q 000859 693 NCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGP-IPPAIGRLSKLYELRLSNNSLNGV 758 (1251)
Q Consensus 693 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 758 (1251)
++.+++.|.|++|.|. .+ ..++.+-+|..||+++|+|... --..|+++|-|+.+.|.+|++.+.
T Consensus 350 KLGNIKtL~La~N~iE-~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIE-TL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhcCEeeeehhhhhHh-hh-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 6788999999999996 22 3577888999999999999842 124689999999999999999853
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.08 E-value=2.6e-11 Score=143.94 Aligned_cols=150 Identities=27% Similarity=0.320 Sum_probs=81.1
Q ss_pred cccccEEEecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEe
Q 000859 407 LSNLQELALYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLH 486 (1251)
Q Consensus 407 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 486 (1251)
+..++.+++..|.+.. .-..+..+.+|+.|++.+|+|. .+...+..+++|++|++++|.|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 3444444455555542 2223445555666666666655 22222555666666666666665332 245555566666
Q ss_pred ccCCccCCCcCccccccccCCeeecCCCcCcccCC-cchhccchhhhhhccCCccccCCchhhhhhcCCCeeeccccccc
Q 000859 487 LRQNELVGQIPASLGNCHQLIILDLADNKLSGGVP-ASFGFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLN 565 (1251)
Q Consensus 487 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 565 (1251)
+++|.|+.. ..+..++.|+.+++++|+++.+.+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 666666532 344556667777777776664333 2 4566666667777776652 233344444444455555553
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=3.7e-11 Score=142.55 Aligned_cols=268 Identities=24% Similarity=0.245 Sum_probs=127.9
Q ss_pred cccEEEecccccCCCCchhhhcccccchhhcccCcccccccCCcCCCCccceEeccCCcccCCCCCcccccCCCcEEecc
Q 000859 409 NLQELALYHNNFQGSLPREIGMLVKLELLYLYDNHLSGQIPSEVGNCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLR 488 (1251)
Q Consensus 409 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 488 (1251)
.++.++..++.+...--. ...+..++.+++..|.+. .+-..+..+++|+.|++.+|+|. .+...+..+++|++|+++
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheecc
Confidence 344445544444321111 145566777777777776 33344566666666666666666 222224455555555555
Q ss_pred CCccCCCcCccccccccCCeeecCCCcCcccCCcchhccchhhhhhccCCccccCCc-hhhhhhcCCCeeeccccccccc
Q 000859 489 QNELVGQIPASLGNCHQLIILDLADNKLSGGVPASFGFLQALEQLMLYNNSLEGNLP-GSLINLRNLTRINFSKNRLNGR 567 (1251)
Q Consensus 489 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~l~~N~l~~~ 567 (1251)
+|+|+.. ..+..++.|+.|++++|+|+.. ..+..+.+|+.+++++|.+....+ . ...+.+|+.+.+++|.+.
T Consensus 127 ~N~I~~i--~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~-- 199 (414)
T KOG0531|consen 127 FNKITKL--EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR-- 199 (414)
T ss_pred ccccccc--cchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--
Confidence 5555532 2344444455555555555421 223334445555555555443222 1 233444444444444432
Q ss_pred ccccccCccceeeecccCccccCCCCCCCCcccCceeecccCccccccCcccccccccceEEccCCcccCCCCccccccC
Q 000859 568 IATLCSSHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKIPWTFGKIRELSLLDLSGNSLTGPIPTQLLMCK 647 (1251)
Q Consensus 568 ~~~l~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 647 (1251)
. ...+..+..+..+++..|.++..-+-....+.
T Consensus 200 ---------------------------------------------~--i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~ 232 (414)
T KOG0531|consen 200 ---------------------------------------------E--IEGLDLLKKLVLLSLLDNKISKLEGLNELVML 232 (414)
T ss_pred ---------------------------------------------c--ccchHHHHHHHHhhcccccceeccCcccchhH
Confidence 1 11122222333334444444321111100000
Q ss_pred CccEEEcCCCccCCCCccccCCCcccccccccCccccCCCccccccccccceeeccCccccc---ccCcc-cCCCCCCce
Q 000859 648 KLSHIDLNNNLLSGAVPSWLGTLPQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNG---SLPNE-VGNLASLNV 723 (1251)
Q Consensus 648 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~-~~~l~~L~~ 723 (1251)
+|+.+++++|++. ..+..+..+.++..|+++.|++... ..+.....+..+.++.|++.. ..... .+..+.++.
T Consensus 233 ~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (414)
T KOG0531|consen 233 HLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVT 309 (414)
T ss_pred HHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccc
Confidence 2455555555555 3334445555666666666655542 233344455555566665541 11222 556677888
Q ss_pred eccCCCcCCCCCC
Q 000859 724 LTLSGNLLSGPIP 736 (1251)
Q Consensus 724 L~ls~N~l~~~~~ 736 (1251)
.++..|.+....+
T Consensus 310 ~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 310 LTLELNPIRKISS 322 (414)
T ss_pred cccccCccccccc
Confidence 8888888775443
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.05 E-value=1.5e-11 Score=131.07 Aligned_cols=201 Identities=26% Similarity=0.303 Sum_probs=115.5
Q ss_pred ccccccccCCeeecCCCcCcccCCcch----hccchhhhhhccCCccccCCchhhhhhcCCCeeeccccccccccccccc
Q 000859 498 ASLGNCHQLIILDLADNKLSGGVPASF----GFLQALEQLMLYNNSLEGNLPGSLINLRNLTRINFSKNRLNGRIATLCS 573 (1251)
Q Consensus 498 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~~ 573 (1251)
..+..+++|++||||+|-+.-..+..| .....|++|+|.||.+.-..-..++. .|..|. .|..
T Consensus 86 ~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk--------- 152 (382)
T KOG1909|consen 86 KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKK--------- 152 (382)
T ss_pred HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhc---------
Confidence 345567789999999998864444433 45677888999888876322222211 122222 1111
Q ss_pred CccceeeecccCccccCCCCCCCCcccCceeecccCcccccc----CcccccccccceEEccCCcccCC----CCccccc
Q 000859 574 SHSFLSFDVTNNEFDHEIPPQLGNSPSLERLRLGNNKFIGKI----PWTFGKIRELSLLDLSGNSLTGP----IPTQLLM 645 (1251)
Q Consensus 574 ~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~ 645 (1251)
.+.-+.|+.+..++|.+-... ...|...+.|+.+.++.|.|... +-..+..
T Consensus 153 ---------------------~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~ 211 (382)
T KOG1909|consen 153 ---------------------AASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEH 211 (382)
T ss_pred ---------------------cCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHh
Confidence 112244555555555543211 12244445566666666665421 2234556
Q ss_pred cCCccEEEcCCCccCC----CCccccCCCcccccccccCccccCCCcccc-----ccccccceeeccCcccccc----cC
Q 000859 646 CKKLSHIDLNNNLLSG----AVPSWLGTLPQLGELKLSFNQFVGFLPREL-----FNCSKLLVLSLDGNMLNGS----LP 712 (1251)
Q Consensus 646 l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p 712 (1251)
|++|+.|||.+|-++. .+...+..+++|++|+++++.+...-...+ ...+.|++|.|.+|.++.. +-
T Consensus 212 ~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la 291 (382)
T KOG1909|consen 212 CPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALA 291 (382)
T ss_pred CCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHH
Confidence 6677777777776662 234455667777777777777664322222 1356788888888888632 33
Q ss_pred cccCCCCCCceeccCCCcCC
Q 000859 713 NEVGNLASLNVLTLSGNLLS 732 (1251)
Q Consensus 713 ~~~~~l~~L~~L~ls~N~l~ 732 (1251)
..+...+.|+.|+|++|++.
T Consensus 292 ~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 292 ACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHhcchhhHHhcCCccccc
Confidence 34556788889999999883
No 475
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.03 E-value=2.7e-09 Score=110.14 Aligned_cols=136 Identities=16% Similarity=0.156 Sum_probs=97.4
Q ss_pred ceecccCCceEEEEEecC-------CcEEEEEEeccCC------------c---------hhhhHHHH----HHHHHHHh
Q 000859 952 FIIGSGGSGTVYKAELAN-------GATVAVKKISCKD------------D---------HLLNKSFT----REVKTLGR 999 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~-------~~~vavK~~~~~~------------~---------~~~~~~~~----~E~~~l~~ 999 (1251)
..||.|--+.||.|...+ +..+|||+.+... + ....+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999996543 4799999985221 0 01122333 79999999
Q ss_pred cc--CCCccceeceeeecCCCceeEEEeecCCCChHH-hhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCC
Q 000859 1000 IR--HRHLVKLMGHCCNKGAGSNLLIYEYMENGSVWD-WLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYL-HHDCVPK 1075 (1251)
Q Consensus 1000 l~--h~niv~l~g~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ 1075 (1251)
+. .-++.+.+++ ...++||||+.++.+.. .++. ..++.++...+..+++.+|.++ |+. +
T Consensus 83 l~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd--------~~~~~~~~~~i~~~i~~~l~~l~H~~---g 145 (197)
T cd05146 83 MQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKD--------AKLNDEEMKNAYYQVLSMMKQLYKEC---N 145 (197)
T ss_pred HHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhhc--------cccCHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 95 3566666653 12489999997653322 1221 1244556677889999999999 787 9
Q ss_pred eeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1076 ILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1076 ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
+||||+++.||+++ ++.+.++|||.|...
T Consensus 146 lVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 146 LVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred eecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 99999999999997 578999999988653
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=2e-10 Score=116.05 Aligned_cols=121 Identities=33% Similarity=0.432 Sum_probs=37.2
Q ss_pred ccccccccCccccCCCccccc-cccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCccc-ccccccceee
Q 000859 672 QLGELKLSFNQFVGFLPRELF-NCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAI-GRLSKLYELR 749 (1251)
Q Consensus 672 ~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~ 749 (1251)
++++|+|++|+|+.+ +.++ .+.+|+.|+|++|.|+ .++ .+..++.|++|++++|+|+ .+++.+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 455555555555542 2233 3455555555555555 232 3444555555555555555 233222 2345555555
Q ss_pred ccCcccccccchhhhchhhHHHHHhccCCcccCCCCCCcCccccccEEEccCCccccCCch----hhhhccCCCcEe
Q 000859 750 LSNNSLNGVIPLEIGQLQNLQSILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPS----QLGEMSSLGKLN 822 (1251)
Q Consensus 750 l~~N~l~~~~p~~~~~l~~l~~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~L~~L~ 822 (1251)
|++|+|... . .+ ..++.+++|+.|+|.+|+++. .+. .+..+|+|+.||
T Consensus 95 L~~N~I~~l-----~------------------~l-~~L~~l~~L~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 95 LSNNKISDL-----N------------------EL-EPLSSLPKLRVLSLEGNPVCE-KKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -TTS---SC-----C------------------CC-GGGGG-TT--EEE-TT-GGGG-STTHHHHHHHH-TT-SEET
T ss_pred CcCCcCCCh-----H------------------Hh-HHHHcCCCcceeeccCCcccc-hhhHHHHHHHHcChhheeC
Confidence 555554310 0 11 234567889999999999984 333 377888888886
No 477
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=5.7e-10 Score=140.59 Aligned_cols=282 Identities=24% Similarity=0.272 Sum_probs=163.0
Q ss_pred CCCCcccEEEccCCCCCCCcCccccccCcccEEeccccc--ccCCCCcccCCCccccEEEeccCCCCCCCCCcccccccc
Q 000859 92 GRLQSLIHLDLSSNSLTGPIPTALSNLSSLESLLLFSNQ--LAGTIPTQLGSLTSLRVMRIGDNWLSGSIPTSFGNLVNL 169 (1251)
Q Consensus 92 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 169 (1251)
......++..+.+|.+. .++.... .++|++|-+..|. +.-..++.|..++.|++|||++|.=.+.+|.++++|-+|
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 34466777777777765 3444333 3478888888886 443334457788999999999888778899999999999
Q ss_pred cccccccCCCCCCCCCCcCcccccceeeeccccccCCCCcccCCCCCCceeecccccc--CCCchhhhcccccCceeecc
Q 000859 170 GTLGLASCSLSGPIPPQFGQLSQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENNL--NGSIPAALGRLQNLQLLNLG 247 (1251)
Q Consensus 170 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~l--~~~~p~~~~~l~~L~~L~L~ 247 (1251)
++|+|++..+. .+|..+++|++|.+|++..+.-...+|.....+++|++|.+..-.. ++..-..+.++.+|+.+...
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 99999998887 7888899999999999988876666677777788888888766542 22333344445555555443
Q ss_pred CccCCCCCCccccCCCccc----eeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccc
Q 000859 248 NNSLSGEIPSELGELSQLG----YLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNI 323 (1251)
Q Consensus 248 ~N~l~~~~~~~l~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 323 (1251)
.... .+-..+..+.+|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......+.....+.
T Consensus 677 ~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~--------- 744 (889)
T KOG4658|consen 677 ISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLL--------- 744 (889)
T ss_pred cchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhh---------
Confidence 3222 1111222333333 2222222222 3334455666666666666665532221111111000
Q ss_pred cCcccccccccccchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCccccccccccccEEEeeccccccc
Q 000859 324 SGSIPRRICTNATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIPVELFQLVALTHLYLHNNSLVGS 399 (1251)
Q Consensus 324 ~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 399 (1251)
.++++..+...++... ..+.+.--.++|+.|.+..+.....+......+..+..+.+..+.+.+.
T Consensus 745 ----------~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 745 ----------CFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ----------hHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 1122222222222211 1112222346777777777766655555555555555555555555443
No 478
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.98 E-value=4.9e-10 Score=84.91 Aligned_cols=41 Identities=41% Similarity=0.955 Sum_probs=31.7
Q ss_pred HHhHHHHHHHHHHcCCCCCCCCCCCCCCC-CCCCccccEEEc
Q 000859 27 DEELSVLLEIKKSFTADPENVLHAWNQSN-QNLCTWRGITCG 67 (1251)
Q Consensus 27 ~~~~~all~~k~~~~~~~~~~l~sW~~~~-~~~c~w~gv~C~ 67 (1251)
++|++||++||+++..||.+.+.+|+.+. .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 68999999999999878889999998763 799999999995
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.97 E-value=6.2e-10 Score=128.64 Aligned_cols=248 Identities=20% Similarity=0.215 Sum_probs=171.8
Q ss_pred HhhcCCCcCceecccCCceEEEEEe--cCCcEEEEEEeccCCchh-hhHHHHHHHHHHHhc-cCCCccceeceeeecCCC
Q 000859 943 GATNNLSDEFIIGSGGSGTVYKAEL--ANGATVAVKKISCKDDHL-LNKSFTREVKTLGRI-RHRHLVKLMGHCCNKGAG 1018 (1251)
Q Consensus 943 ~~~~~~~~~~~lG~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 1018 (1251)
....+|..+..||.|.|+.|++... .++..||+|......... ....-..|+.+...+ .|.++++.+..+.....
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~- 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ- 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc-
Confidence 3456788888999999999999854 467889999886443221 222234566666666 58888887765544333
Q ss_pred ceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCC-CCeEEc
Q 000859 1019 SNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSN-MEAHLG 1097 (1251)
Q Consensus 1019 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~ 1097 (1251)
.++=-||+++++......- ...++...++++..|++.++.++|+. .++|+|+||+||++..+ +..+++
T Consensus 341 -~~ip~e~~~~~s~~l~~~~-------~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~ 409 (524)
T KOG0601|consen 341 -GYIPLEFCEGGSSSLRSVT-------SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLG 409 (524)
T ss_pred -ccCchhhhcCcchhhhhHH-------HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcc
Confidence 3688899999987766522 34567788889999999999999998 99999999999999886 788999
Q ss_pred ccccccccccccCCCCcccceeeccccee--cccccccCCCCCccceeehhHHHHHHhhCCCCCCCccccchhHHHHHHH
Q 000859 1098 DFGLAKALVEDYNSNTESNTWFAGSYGYI--APEYAYSLKATEKCDVYSMGIVLMELVSGKMPTDATFGVEMDMVRWVEM 1175 (1251)
Q Consensus 1098 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 1175 (1251)
|||.++.+.-. . ....+.-+++ +|+......+..+.|++|||..+.|.++|..--.... .|.
T Consensus 410 ~~~~~t~~~~~--~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------~~~-- 473 (524)
T KOG0601|consen 410 DFGCWTRLAFS--S-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------QSL-- 473 (524)
T ss_pred cccccccccee--c-----ccccccccccccchhhccccccccccccccccccccccccCcccCcccc-------cce--
Confidence 99998642110 0 0012223333 5555667778899999999999999998865432110 010
Q ss_pred HHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 000859 1176 HMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSRQVCDLLL 1232 (1251)
Q Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 1232 (1251)
.+.....+..+. .......+.+.++..|+..||.+.+......
T Consensus 474 -----------~i~~~~~p~~~~---~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 474 -----------TIRSGDTPNLPG---LKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred -----------eeecccccCCCc---hHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 001111122222 2256778888899999999999998765443
No 480
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=1.3e-10 Score=127.18 Aligned_cols=161 Identities=25% Similarity=0.238 Sum_probs=93.9
Q ss_pred cccccCceeeccCccCCCCCC--ccccCCCccceeeccCccccCcC--CcccccCCCccEEEeccccccCCCCCc-cccc
Q 000859 236 GRLQNLQLLNLGNNSLSGEIP--SELGELSQLGYLNLMGNRLEGAI--PRSFAKMGNLQSLDLSMNRLTGGIPEE-FGNM 310 (1251)
Q Consensus 236 ~~l~~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l 310 (1251)
.++++|+...|.+..+. ..+ .....+++++.||||+|-+.... ......+++|+.|+|+.|++....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 34556666666666554 222 24556677777777777665332 223455677777777777765322221 1245
Q ss_pred cceEEEEccCccccCcccccccccccchhhhhccchhcccCCCcCccCCCCCceEEccCCcccCCcc--ccccccccccE
Q 000859 311 GQLVFLVLSNNNISGSIPRRICTNATSLEHLILAEIQLSGEIPVELSQCQSLKQLDLSNNTLNGTIP--VELFQLVALTH 388 (1251)
Q Consensus 311 ~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~ 388 (1251)
++|+.|.|+.|.++-.--.+....+++|+.|.|..|............++.|+.|||++|.+. ..+ .....++.|+.
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhh
Confidence 667777777777764444455556677777777777432233334445667777777777775 333 33445666666
Q ss_pred EEeecccccc
Q 000859 389 LYLHNNSLVG 398 (1251)
Q Consensus 389 L~L~~n~l~~ 398 (1251)
|+++.+.+..
T Consensus 276 Lnls~tgi~s 285 (505)
T KOG3207|consen 276 LNLSSTGIAS 285 (505)
T ss_pred hhccccCcch
Confidence 6666666654
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.95 E-value=3.5e-10 Score=114.27 Aligned_cols=83 Identities=33% Similarity=0.408 Sum_probs=17.8
Q ss_pred cccccchhhcccCcccccccCCcC-CCCccceEeccCCcccCCCCCcccccCCCcEEeccCCccCCCcCccc-cccccCC
Q 000859 430 MLVKLELLYLYDNHLSGQIPSEVG-NCSSLKWIDFFGNSFTGEIPTSIGRLKDLNFLHLRQNELVGQIPASL-GNCHQLI 507 (1251)
Q Consensus 430 ~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~ 507 (1251)
+..++++|+|++|.|+ .+ +.++ .+.+|+.|++++|.|+. ++ .+..+++|++|++++|+|+. +...+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred cccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 4445666666666665 22 2343 35566666666666652 22 35555555555555555553 22223 2355555
Q ss_pred eeecCCCcCc
Q 000859 508 ILDLADNKLS 517 (1251)
Q Consensus 508 ~L~Ls~N~l~ 517 (1251)
.|++++|+|.
T Consensus 92 ~L~L~~N~I~ 101 (175)
T PF14580_consen 92 ELYLSNNKIS 101 (175)
T ss_dssp EEE-TTS---
T ss_pred EEECcCCcCC
Confidence 5555555554
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.95 E-value=5e-09 Score=113.81 Aligned_cols=145 Identities=20% Similarity=0.274 Sum_probs=107.6
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccC--CCccceeceeeecC-CCceeEEEeecC
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRH--RHLVKLMGHCCNKG-AGSNLLIYEYME 1028 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~-~~~~~lv~E~~~ 1028 (1251)
+.++.|.++.||++...+|+.+++|.............+.+|+++++.+.+ ..+.+++++..... ....++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998776789999997644332234678899999999965 34566776554322 124589999999
Q ss_pred CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhc-------------------------------------
Q 000859 1029 NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHD------------------------------------- 1071 (1251)
Q Consensus 1029 ~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------- 1071 (1251)
|.++.+.+.. ..++..+...++.++++++++||+.
T Consensus 84 G~~l~~~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
T cd05154 84 GRVLRDRLLR--------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP 155 (223)
T ss_pred CEecCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence 9887765431 2356677777888888888888752
Q ss_pred ----------------CCCCeeecCCCCCCeeecC--CCCeEEcccccccc
Q 000859 1072 ----------------CVPKILHRDIKSSNILLDS--NMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1072 ----------------~~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~ 1104 (1251)
....++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0246899999999999998 66789999998753
No 483
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.90 E-value=4.2e-08 Score=107.22 Aligned_cols=270 Identities=14% Similarity=0.130 Sum_probs=162.6
Q ss_pred CcCceecccCCceEEEEEecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhc-cCCCccceece----eeec-CCCceeE
Q 000859 949 SDEFIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLNKSFTREVKTLGRI-RHRHLVKLMGH----CCNK-GAGSNLL 1022 (1251)
Q Consensus 949 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~----~~~~-~~~~~~l 1022 (1251)
...+.||+|+-+.+|-..-- +.. +.|+......... .+.++.|... .||-+-.-+.+ .... ......+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh-hch-hheeecCCCchHH----HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34557999999999976221 122 4566654433211 1233444444 56654331110 0011 1112456
Q ss_pred EEeecCCC-ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 000859 1023 IYEYMENG-SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGL 1101 (1251)
Q Consensus 1023 v~E~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 1101 (1251)
+|..+.+- ....++.- .-.........|+-.+++++.++.+.+.||+. |.+-+|+.++|+||++++.|.+.|-..
T Consensus 88 lmP~v~g~~pI~~~y~p-~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 88 LMPKVSGKEPIHMIYSP-ATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred ecccCCCccchhhhcCc-hhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 77776653 22222211 11112234679999999999999999999999 999999999999999999999998664
Q ss_pred ccccccccCCCCcccceeecccceecccccc-----cCCCCCccceeehhHHHHHHhh-CCCCCCCccccch---hHHHH
Q 000859 1102 AKALVEDYNSNTESNTWFAGSYGYIAPEYAY-----SLKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEM---DMVRW 1172 (1251)
Q Consensus 1102 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~---~~~~~ 1172 (1251)
-... .........+|...|.+||.-. +...+...|.|.+||++++++. |++||.+...... ....-
T Consensus 164 fqi~-----~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 164 FQIN-----ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred eeec-----cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 4332 1222333457889999999644 4556788999999999999988 5999975432110 00000
Q ss_pred HHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccC--CCCCCCHHHHHHHHHhhc
Q 000859 1173 VEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTS--PQERPSSRQVCDLLLNVF 1235 (1251)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~eil~~L~~~~ 1235 (1251)
+ ....+ ....+.-......|...+.+..++++..+..+|+... +.-|||++.++..|.+..
T Consensus 239 I-a~g~f-~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 239 I-AHGRF-AYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred h-hccee-eechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 0 00000 0001111111112233344556778999999999864 458999998887775544
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.88 E-value=6.7e-10 Score=134.13 Aligned_cols=251 Identities=21% Similarity=0.249 Sum_probs=167.2
Q ss_pred cCCCcCceecccCCceEEEEEec-CCcEEEEEEeccCCc--hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 946 NNLSDEFIIGSGGSGTVYKAELA-NGATVAVKKISCKDD--HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 946 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
..+...+-+-.|+++.++.+.-. .|...++|+...... ....+...++-.+.-..++|.+++..--+.. ....++
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~--rsP~~L 881 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC--RSPLPL 881 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--CCCcch
Confidence 34556667889999999988433 344445554321110 0011222223333333345666665433222 233589
Q ss_pred EEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 000859 1023 IYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLA 1102 (1251)
Q Consensus 1023 v~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 1102 (1251)
+++|..+++|..-++..+ ..+.+..+.....+.++.+|||.. .+.|||++|.|.+...++..+++|||..
T Consensus 882 ~~~~~~~~~~~Skl~~~~-------~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-------CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred hhHHhccCCchhhhhcCC-------CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccc
Confidence 999999999999988743 344444555667788999999998 7999999999999999999999999843
Q ss_pred cccccc---------------------cCC------CCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhC
Q 000859 1103 KALVED---------------------YNS------NTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSG 1155 (1251)
Q Consensus 1103 ~~~~~~---------------------~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg 1155 (1251)
...... ... .........||+.|.|||...+......+|+|+.|++++|.++|
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 322110 000 00112335799999999999999999999999999999999999
Q ss_pred CCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHHccccCCCCCCCHH
Q 000859 1156 KMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQCTKTSPQERPSSR 1225 (1251)
Q Consensus 1156 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1225 (1251)
..||.+..+... .+.+.... .+....++..+.+..+++...+..+|.+|-.+.
T Consensus 1032 ~pp~na~tpq~~----------------f~ni~~~~-~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1032 IPPFNAETPQQI----------------FENILNRD-IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCCcchhhh----------------hhccccCC-CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 999987644322 11111111 122334455666788899999999999997766
No 485
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=3e-08 Score=97.97 Aligned_cols=131 Identities=25% Similarity=0.366 Sum_probs=94.0
Q ss_pred eecccCCceEEEEEecCCcEEEEEEeccCC--c-----hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeEEEe
Q 000859 953 IIGSGGSGTVYKAELANGATVAVKKISCKD--D-----HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLLIYE 1025 (1251)
Q Consensus 953 ~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~lv~E 1025 (1251)
.+++|+-+.+|.+.+. |.++++|.-..+. . ....+.-.+|+.++.+++--.|..-+=+..+ +....++||
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDNGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCCCEEEEE
Confidence 5889999999999886 5556666543332 1 1123455679999999864333322222222 334479999
Q ss_pred ecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 000859 1026 YMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1026 ~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 1104 (1251)
|++|..|.+++... ...++..+=.-+.-||.. +|||+|+.++||++..+. +.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~--------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA--------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc--------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999998888763 134566666778889999 999999999999998765 99999999863
No 486
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.82 E-value=4.5e-08 Score=95.88 Aligned_cols=144 Identities=22% Similarity=0.300 Sum_probs=101.2
Q ss_pred cCceecccCCceEEEEEecCCcEEEEEEeccCC-c------hhhhHHHHHHHHHHHhccCCCccceeceeeecCCCceeE
Q 000859 950 DEFIIGSGGSGTVYKAELANGATVAVKKISCKD-D------HLLNKSFTREVKTLGRIRHRHLVKLMGHCCNKGAGSNLL 1022 (1251)
Q Consensus 950 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~l 1022 (1251)
....+-+|+-+.|+++.+. |+...||.-..+. . ....+...+|++.+.+++--.|..-.=++++... ..+
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~--~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG--GQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC--CeE
Confidence 4557889999999999986 7777777543332 1 1234566789999999864343322223443333 369
Q ss_pred EEeecCC-CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCC---CeEEcc
Q 000859 1023 IYEYMEN-GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNM---EAHLGD 1098 (1251)
Q Consensus 1023 v~E~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~D 1098 (1251)
+|||+++ .++.+|+...- ......+....++.+|-+.+.-||.. +|+|+|+..+||++.+++ .+.++|
T Consensus 88 ~ME~~~g~~~vk~~i~~~~-----~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lId 159 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTM-----EDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILID 159 (229)
T ss_pred EEEeccchhHHHHHHHHHc-----cCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEe
Confidence 9999986 48888887642 12222223367888899999999999 999999999999996654 358999
Q ss_pred cccccc
Q 000859 1099 FGLAKA 1104 (1251)
Q Consensus 1099 fG~a~~ 1104 (1251)
||++..
T Consensus 160 fgls~~ 165 (229)
T KOG3087|consen 160 FGLSSV 165 (229)
T ss_pred ecchhc
Confidence 999843
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.76 E-value=1e-08 Score=129.44 Aligned_cols=129 Identities=23% Similarity=0.350 Sum_probs=82.4
Q ss_pred cccceeeeccccccCCCCcccCCCCCCceeeccccc--cCCCchhhhcccccCceeeccCccCCCCCCccccCCCcccee
Q 000859 191 SQLEELILQQNQLQGPIPAELGNCSSLSIFTAAENN--LNGSIPAALGRLQNLQLLNLGNNSLSGEIPSELGELSQLGYL 268 (1251)
Q Consensus 191 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 268 (1251)
...+...+-+|.+. .++.... .+.|+.|-+..|. +.......|..++.|+.|||++|.=-+.+|..++++-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45566666666554 2333322 2356667777765 443444456667777777777766555677777777777777
Q ss_pred eccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCcc
Q 000859 269 NLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNN 322 (1251)
Q Consensus 269 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 322 (1251)
+|++..+. .+|..+.+++.|.+|++..+.-...+|.....+.+|++|.+..-.
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 77777776 666677777777777777766554556666667777777765443
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.73 E-value=1.9e-07 Score=102.36 Aligned_cols=144 Identities=16% Similarity=0.105 Sum_probs=102.0
Q ss_pred ceecccCCceEEEEEecCCcEEEEEEeccCCchhhh----------HHHHHHHHHHHhccCCC--ccceeceeeecC---
Q 000859 952 FIIGSGGSGTVYKAELANGATVAVKKISCKDDHLLN----------KSFTREVKTLGRIRHRH--LVKLMGHCCNKG--- 1016 (1251)
Q Consensus 952 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~--- 1016 (1251)
+.+-+.....|+++.+ +|+.|.||........... ..+.+|...+.++...+ +++.+++.....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3555566666888877 4789999977433311111 14778999998885333 334444443221
Q ss_pred CCceeEEEeecCCC-ChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecC-----
Q 000859 1017 AGSNLLIYEYMENG-SVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDS----- 1090 (1251)
Q Consensus 1017 ~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~----- 1090 (1251)
....++|||++++. +|.+++.... ....+......++.+++..++-||+. ||+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~-----~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA-----TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 22358999999886 8998885321 12345667778999999999999999 9999999999999975
Q ss_pred --CCCeEEcccccccc
Q 000859 1091 --NMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1091 --~~~~kl~DfG~a~~ 1104 (1251)
++.+.++||+.++.
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46799999998753
No 489
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.70 E-value=2.7e-10 Score=131.12 Aligned_cols=129 Identities=33% Similarity=0.288 Sum_probs=81.5
Q ss_pred cceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeeccCcccccccchhhhchhhHHHHHhcc
Q 000859 697 LLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRLSNNSLNGVIPLEIGQLQNLQSILDLS 776 (1251)
Q Consensus 697 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l~ 776 (1251)
|...+.+.|.|+ .+...+.-++.|+.|+||+|+++.. +.+..|++|++|||+.|+|+.+.-.....++ |+ .|+|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~-~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQ-LLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-he-eeeec
Confidence 444555566665 4555555566666666666666632 2566666677777777776644444445554 43 36777
Q ss_pred CCcccCCCCCCcCccccccEEEccCCccccCC-chhhhhccCCCcEeeccccCcCcc
Q 000859 777 HNNFTGQIPPSMGTLAKLEVLNLSHNQLVGEL-PSQLGEMSSLGKLNLSYNDLQGKL 832 (1251)
Q Consensus 777 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~ 832 (1251)
+|.++ ++ ..+.+|++|+.|||+.|-|++.- -.-+..+..|..|+|.|||+....
T Consensus 241 nN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 241 NNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred ccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 77776 33 34677788888888888887521 123556677888888888887543
No 490
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.69 E-value=1.1e-07 Score=98.01 Aligned_cols=125 Identities=26% Similarity=0.323 Sum_probs=81.9
Q ss_pred eEEEEEecCCcEEEEEEeccCC-------------------------chhhhHHHHHHHHHHHhccCC--Cccceeceee
Q 000859 961 TVYKAELANGATVAVKKISCKD-------------------------DHLLNKSFTREVKTLGRIRHR--HLVKLMGHCC 1013 (1251)
Q Consensus 961 ~V~~~~~~~~~~vavK~~~~~~-------------------------~~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~ 1013 (1251)
.||.|...+|..||||+.+... .........+|.+.|.++... ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899988889999999985321 011224567899999999655 566666432
Q ss_pred ecCCCceeEEEeecC--CCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHH-hhhcCCCCeeecCCCCCCeeecC
Q 000859 1014 NKGAGSNLLIYEYME--NGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEY-LHHDCVPKILHRDIKSSNILLDS 1090 (1251)
Q Consensus 1014 ~~~~~~~~lv~E~~~--~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlkp~Nill~~ 1090 (1251)
. .++||||++ |..+.. +... .++.++...++.+++..+.. +|.. ||+|+|+.+.||++++
T Consensus 80 ---~--~~ivME~I~~~G~~~~~-l~~~--------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~ 142 (188)
T PF01163_consen 80 ---R--NVIVMEYIGEDGVPLPR-LKDV--------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDD 142 (188)
T ss_dssp ---T--TEEEEE--EETTEEGGC-HHHC--------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEET
T ss_pred ---C--CEEEEEecCCCccchhh-HHhc--------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeec
Confidence 1 379999998 544443 3321 11134456778888886666 4677 9999999999999988
Q ss_pred CCCeEEcccccccc
Q 000859 1091 NMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1091 ~~~~kl~DfG~a~~ 1104 (1251)
+ .+.++|||.|..
T Consensus 143 ~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 143 G-KVYIIDFGQAVD 155 (188)
T ss_dssp T-CEEE--GTTEEE
T ss_pred c-eEEEEecCccee
Confidence 7 999999998854
No 491
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.64 E-value=6.7e-07 Score=100.93 Aligned_cols=176 Identities=20% Similarity=0.294 Sum_probs=129.9
Q ss_pred CCceEEEE-EecCCcEEEEEEeccCCchhhhHHHHHHHHHHHhccCCCccceeceeeec--CCCceeEEEeecCC-CChH
Q 000859 958 GSGTVYKA-ELANGATVAVKKISCKDDHLLNKSFTREVKTLGRIRHRHLVKLMGHCCNK--GAGSNLLIYEYMEN-GSVW 1033 (1251)
Q Consensus 958 ~fg~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~~~lv~E~~~~-gsL~ 1033 (1251)
-..+.|++ ...||..|+.|+++....... .....-+++++++.|+|||++..++... ++...++||+|.++ ++|+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~-nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST-NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc-ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 44578999 566899999999954433211 1223567889999999999999877622 34467899999986 5788
Q ss_pred HhhhcCC-CC-------cccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 000859 1034 DWLHKQP-VN-------IKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKAL 1105 (1251)
Q Consensus 1034 ~~l~~~~-~~-------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 1105 (1251)
++--... .. .......+++..|.++.|+..||.++|+. |+.-+-+.+++|+++.+.+++|+.-|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7653322 22 22345678899999999999999999999 9999999999999999999999988877655
Q ss_pred ccccCCCCcccceeecccceecccccccCCCCCccceeehhHHHHHHhhCCCC
Q 000859 1106 VEDYNSNTESNTWFAGSYGYIAPEYAYSLKATEKCDVYSMGIVLMELVSGKMP 1158 (1251)
Q Consensus 1106 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv~l~el~tg~~p 1158 (1251)
..+.. |.+ .--.+-|.=.+|.+++.+.||..-
T Consensus 444 ~~d~~------------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT------------------EPL---ESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC------------------cch---hHHhhhhHHHHHHHHHHHhhcccc
Confidence 33220 111 112346778899999999998643
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.59 E-value=3.5e-08 Score=82.00 Aligned_cols=59 Identities=39% Similarity=0.566 Sum_probs=26.7
Q ss_pred cCceeeccCccCCCCCCccccCCCccceeeccCccccCcCCcccccCCCccEEEecccc
Q 000859 240 NLQLLNLGNNSLSGEIPSELGELSQLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNR 298 (1251)
Q Consensus 240 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 298 (1251)
+|++|++++|+++...+..|.++++|++|++++|+++.+.+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333344444444444444444444444444444444444444443
No 493
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.59 E-value=3.2e-08 Score=82.18 Aligned_cols=61 Identities=44% Similarity=0.640 Sum_probs=56.5
Q ss_pred CccceeeccCccccCcCCcccccCCCccEEEeccccccCCCCCccccccceEEEEccCccc
Q 000859 263 SQLGYLNLMGNRLEGAIPRSFAKMGNLQSLDLSMNRLTGGIPEEFGNMGQLVFLVLSNNNI 323 (1251)
Q Consensus 263 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 323 (1251)
++|++|++++|+++.+.+..|.++++|++|++++|+++...+.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999988888999999999999999999988889999999999999999975
No 494
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.58 E-value=3.5e-07 Score=96.03 Aligned_cols=134 Identities=24% Similarity=0.245 Sum_probs=97.4
Q ss_pred cCceecccCCceEEEEEecCCcEEEEEEeccCCc---------------------hhhhHHHHHHHHHHHhccCC--Ccc
Q 000859 950 DEFIIGSGGSGTVYKAELANGATVAVKKISCKDD---------------------HLLNKSFTREVKTLGRIRHR--HLV 1006 (1251)
Q Consensus 950 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---------------------~~~~~~~~~E~~~l~~l~h~--niv 1006 (1251)
+...||.|.-+.||.|....|.++|||.=+.... ........+|.++|+++.-. .|.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 4468999999999999988899999997532210 12334567899999999654 677
Q ss_pred ceeceeeecCCCceeEEEeecCCCChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCe
Q 000859 1007 KLMGHCCNKGAGSNLLIYEYMENGSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNI 1086 (1251)
Q Consensus 1007 ~l~g~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 1086 (1251)
+.+++ ...++||||++|-.|...- ++.+....++..|++-+.-.-.. ||||+|+.+-||
T Consensus 175 ~P~~~------nRHaVvMe~ieG~eL~~~r------------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNI 233 (304)
T COG0478 175 KPIAW------NRHAVVMEYIEGVELYRLR------------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNI 233 (304)
T ss_pred Ccccc------ccceeeeehcccceeeccc------------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheE
Confidence 66653 2347999999986554421 12333444555666655555566 999999999999
Q ss_pred eecCCCCeEEcccccccc
Q 000859 1087 LLDSNMEAHLGDFGLAKA 1104 (1251)
Q Consensus 1087 ll~~~~~~kl~DfG~a~~ 1104 (1251)
+++++|.+.++||--+..
T Consensus 234 lV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 234 LVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred EEecCCCEEEEeCccccc
Confidence 999999999999987643
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.58 E-value=2.1e-09 Score=124.04 Aligned_cols=129 Identities=29% Similarity=0.208 Sum_probs=94.0
Q ss_pred CCCceeeccccccCCCchhhhcccccCceeeccCccCCCCCCccccCCCccceeeccCccccCcCCcccccCCCccEEEe
Q 000859 215 SSLSIFTAAENNLNGSIPAALGRLQNLQLLNLGNNSLSGEIPSELGELSQLGYLNLMGNRLEGAIPRSFAKMGNLQSLDL 294 (1251)
Q Consensus 215 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 294 (1251)
-.|...+.++|.+. ....++.-++.|+.|+|++|+++.. +.+..++.|++|||++|.++.+.--...++ +|+.|.+
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeee
Confidence 46677788888887 5667788888999999999999854 378888999999999999984432233334 4899999
Q ss_pred ccccccCCCCCccccccceEEEEccCccccCcccccccccccchhhhhccchhcc
Q 000859 295 SMNRLTGGIPEEFGNMGQLVFLVLSNNNISGSIPRRICTNATSLEHLILAEIQLS 349 (1251)
Q Consensus 295 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~L~~n~l~ 349 (1251)
++|.++.. ..+.++.+|+.||+++|-|.+--.-.....+..|+.|+|.+|.+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99988743 356788888999999998875443344444556666666666553
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.49 E-value=4.1e-08 Score=114.99 Aligned_cols=153 Identities=18% Similarity=0.264 Sum_probs=104.8
Q ss_pred HHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCCeEEcccccccccccccCCCCcc-----cceeecccceeccccccc
Q 000859 1059 VGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMEAHLGDFGLAKALVEDYNSNTES-----NTWFAGSYGYIAPEYAYS 1133 (1251)
Q Consensus 1059 ~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~ 1133 (1251)
.+++.|+.|+|.. +++||+.|.|++|.++..+.+||+.|+.+..........-.. .....-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455999999987 599999999999999999999999999886544321111111 111234567999999999
Q ss_pred CCCCCccceeehhHHHHHHhh-CCCCCCCccccchhHHHHHHHHHhccchhhhhhhcccCCCCCCchHHHHHHHHHHHHH
Q 000859 1134 LKATEKCDVYSMGIVLMELVS-GKMPTDATFGVEMDMVRWVEMHMEMSGSAREELLDDQMKPLLPGEECAAYQVLEIALQ 1212 (1251)
Q Consensus 1134 ~~~~~~sDiwSlGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1212 (1251)
...+.++|+||+||++|.+.. |+.-+.+.........+.. .++. +.+......+.++.+=+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~--------------~~~~--~~~~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN--------------LLNA--GAFGYSNNLPSELRESLKK 247 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc--------------cccc--ccccccccCcHHHHHHHHH
Confidence 889999999999999999995 6655544322221111100 0000 1111123456678888999
Q ss_pred ccccCCCCCCCHHHHHH
Q 000859 1213 CTKTSPQERPSSRQVCD 1229 (1251)
Q Consensus 1213 cl~~dP~~RPs~~eil~ 1229 (1251)
.+..++.-||++.++..
T Consensus 248 ~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 248 LLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HhcCCcccCcchhhhhc
Confidence 99999999997776643
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.46 E-value=2.9e-06 Score=87.69 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=103.7
Q ss_pred ecccCCceEEEEEecCCcEEEEEEeccCCc-----hhhhHHHHHHHHHHHhccC--CCccceeceee-ecC--CCceeEE
Q 000859 954 IGSGGSGTVYKAELANGATVAVKKISCKDD-----HLLNKSFTREVKTLGRIRH--RHLVKLMGHCC-NKG--AGSNLLI 1023 (1251)
Q Consensus 954 lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~-~~~--~~~~~lv 1023 (1251)
-|+||.+.|++.... |..+-+|.-...-. +-....|.+|...++++.. -.+.+.. ++. ... ....++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467999999998875 55788887641111 2245789999999999953 2244444 222 111 2234799
Q ss_pred EeecCC-CChHHhhhcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCCeeecCCCC--eEEcccc
Q 000859 1024 YEYMEN-GSVWDWLHKQPVNIKMRKSLDWEARLKIAVGLAQGVEYLHHDCVPKILHRDIKSSNILLDSNME--AHLGDFG 1100 (1251)
Q Consensus 1024 ~E~~~~-gsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~DfG 1100 (1251)
+|-+++ -+|.+++.+.. ....+......+..++++.++-||+. |+.|+|+.+.||+++.++. ++++||-
T Consensus 104 Te~L~g~~~L~~~l~~~~-----~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA-----VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEeCCCCccHHHHHhcCC-----cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 997764 48988886542 23456777889999999999999999 9999999999999987677 9999998
Q ss_pred cccc
Q 000859 1101 LAKA 1104 (1251)
Q Consensus 1101 ~a~~ 1104 (1251)
-++.
T Consensus 176 k~r~ 179 (216)
T PRK09902 176 KSRR 179 (216)
T ss_pred ccch
Confidence 6654
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.43 E-value=1.8e-08 Score=93.12 Aligned_cols=139 Identities=23% Similarity=0.305 Sum_probs=91.2
Q ss_pred ccceeeccCcccccccCcc---cCCCCCCceeccCCCcCCCCCCccccc-ccccceeeccCcccccccchhhhchhhHHH
Q 000859 696 KLLVLSLDGNMLNGSLPNE---VGNLASLNVLTLSGNLLSGPIPPAIGR-LSKLYELRLSNNSLNGVIPLEIGQLQNLQS 771 (1251)
Q Consensus 696 ~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~ 771 (1251)
.+..++|++++|- .+++. +.....|+..+|++|.+. ..|..|.. .+.++.|+|++|.|+ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3555666666664 34433 334445666677777776 45555543 346777777777776 56777777777754
Q ss_pred HHhccCCcccCCCCCCcCccccccEEEccCCccccCCchhhhhccCCCcEeeccccCcCccCcccCCCC
Q 000859 772 ILDLSHNNFTGQIPPSMGTLAKLEVLNLSHNQLVGELPSQLGEMSSLGKLNLSYNDLQGKLSKQFSHWP 840 (1251)
Q Consensus 772 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 840 (1251)
|+++.|.+. ..|..+..|.+|-.|+..+|.+. ++|-.+-.-+..-..++.++|+.+.-+..+..|.
T Consensus 105 -lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 105 -LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred -cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccccC
Confidence 777777777 66777777777788888888776 6666644334445566688888888776666665
No 499
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.37 E-value=1.6e-07 Score=98.14 Aligned_cols=182 Identities=16% Similarity=0.157 Sum_probs=100.5
Q ss_pred cchhhhhhccCCcccc--CCchhhhhhcCCCeeecccccccccccccc-cCccceeeecccCcccc-CCCCCCCCcccCc
Q 000859 527 LQALEQLMLYNNSLEG--NLPGSLINLRNLTRINFSKNRLNGRIATLC-SSHSFLSFDVTNNEFDH-EIPPQLGNSPSLE 602 (1251)
Q Consensus 527 l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~l~~N~l~~~~~~l~-~~~~l~~l~l~~n~l~~-~~p~~l~~l~~L~ 602 (1251)
.+.+++|||.+|.|+. .+...+.+++.|++|+++.|+++..+..++ ...+++++-+.+..+.. .....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3455566666666653 333455667777777777777777666664 55666666665554432 2334566788888
Q ss_pred eeecccCcccccc--Ccccccc-cccceEEccCCcccC--CCCccccccCCccEEEcCCCccCCC-CccccCCCcccccc
Q 000859 603 RLRLGNNKFIGKI--PWTFGKI-RELSLLDLSGNSLTG--PIPTQLLMCKKLSHIDLNNNLLSGA-VPSWLGTLPQLGEL 676 (1251)
Q Consensus 603 ~L~L~~N~l~~~~--p~~~~~l-~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L 676 (1251)
.|.++.|.+.... ....... +.+++|..-.|...- ..-.--...+++..+.+..|.|.+. -......+|.+..|
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~L 229 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCL 229 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhh
Confidence 8888888543221 1112222 133333333332210 0000012235677777777776632 22334556777777
Q ss_pred cccCccccCCCc-cccccccccceeeccCcccc
Q 000859 677 KLSFNQFVGFLP-RELFNCSKLLVLSLDGNMLN 708 (1251)
Q Consensus 677 ~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 708 (1251)
+|+.|+|.++.. .++..+++|..|.+++|.|.
T Consensus 230 nL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 230 NLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 777777765422 44555666666666666664
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.36 E-value=3.6e-08 Score=91.17 Aligned_cols=84 Identities=27% Similarity=0.322 Sum_probs=47.8
Q ss_pred cccccccccCccccCCCccccccccccceeeccCcccccccCcccCCCCCCceeccCCCcCCCCCCcccccccccceeec
Q 000859 671 PQLGELKLSFNQFVGFLPRELFNCSKLLVLSLDGNMLNGSLPNEVGNLASLNVLTLSGNLLSGPIPPAIGRLSKLYELRL 750 (1251)
Q Consensus 671 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l 750 (1251)
..|+..+|++|.|..+.++--..++.++.|+|++|+|+ .+|.++..++.|+.|+++.|.+. ..|..|..|.+|-.|+.
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 34444555555555542222233445666666666665 56666666666666666666665 45555555666666666
Q ss_pred cCcccc
Q 000859 751 SNNSLN 756 (1251)
Q Consensus 751 ~~N~l~ 756 (1251)
.+|.+.
T Consensus 131 ~~na~~ 136 (177)
T KOG4579|consen 131 PENARA 136 (177)
T ss_pred CCCccc
Confidence 666654
Done!