Query 000860
Match_columns 1250
No_of_seqs 583 out of 4869
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:25:31 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000860.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000860hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-194 4E-199 1761.5 88.8 1212 1-1250 143-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-190 7E-195 1860.5 131.8 1249 1-1250 193-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-169 4E-174 1675.3 126.2 1198 1-1249 89-1393(1394)
4 KOG0061 Transporter, ABC super 100.0 1.4E-99 3E-104 928.2 61.3 581 647-1250 23-612 (613)
5 PLN03211 ABC transporter G-25; 100.0 4.6E-97 1E-101 916.3 67.0 584 646-1247 36-659 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 7.9E-97 2E-101 917.7 64.2 568 673-1250 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 2.7E-94 5.8E-99 956.6 65.8 591 647-1248 27-696 (1394)
8 PLN03140 ABC transporter G fam 100.0 1.4E-93 3E-98 943.6 63.4 567 673-1247 176-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 1.3E-88 2.8E-93 831.7 43.5 567 673-1249 126-733 (1391)
10 KOG0055 Multidrug/pheromone ex 100.0 1.9E-74 4.1E-79 710.0 50.7 218 647-887 985-1208(1228)
11 KOG0061 Transporter, ABC super 100.0 1.3E-70 2.8E-75 672.8 51.1 548 1-597 58-608 (613)
12 TIGR00955 3a01204 The Eye Pigm 100.0 3.9E-70 8.4E-75 678.8 55.7 551 1-596 53-612 (617)
13 PLN03211 ABC transporter G-25; 100.0 2E-69 4.3E-74 670.0 57.6 548 1-597 96-658 (659)
14 TIGR01257 rim_protein retinal- 100.0 8.3E-68 1.8E-72 696.6 65.5 224 649-899 1937-2162(2272)
15 KOG0054 Multidrug resistance-a 100.0 5.7E-67 1.2E-71 660.8 51.5 738 1-887 549-1357(1381)
16 PLN03130 ABC transporter C fam 100.0 3.6E-64 7.8E-69 674.9 56.7 211 649-888 1237-1457(1622)
17 COG1123 ATPase components of v 100.0 5.1E-64 1.1E-68 580.3 43.9 459 1-887 37-514 (539)
18 PLN03232 ABC transporter C fam 100.0 6.5E-64 1.4E-68 673.7 49.9 210 649-887 1234-1453(1495)
19 PTZ00265 multidrug resistance 100.0 4.5E-63 9.8E-68 658.1 56.9 216 649-887 1165-1447(1466)
20 PRK13549 xylose transporter AT 100.0 4.6E-63 1E-67 605.5 42.2 445 1-889 33-491 (506)
21 PRK10261 glutathione transport 100.0 3.7E-62 8.1E-67 607.9 47.6 226 649-887 313-548 (623)
22 PRK09700 D-allose transporter 100.0 1.1E-62 2.4E-67 603.5 41.8 443 1-887 33-493 (510)
23 PRK10762 D-ribose transporter 100.0 6.8E-63 1.5E-67 603.3 38.8 435 1-889 32-481 (501)
24 TIGR03269 met_CoM_red_A2 methy 100.0 4.3E-62 9.3E-67 599.6 45.7 218 649-887 279-512 (520)
25 PRK15134 microcin C ABC transp 100.0 6.1E-62 1.3E-66 598.9 44.9 226 649-887 275-510 (529)
26 TIGR00957 MRP_assoc_pro multi 100.0 2.4E-61 5.3E-66 649.7 53.8 210 649-887 1284-1503(1522)
27 PRK15439 autoinducer 2 ABC tra 100.0 5E-62 1.1E-66 595.7 41.3 438 1-888 39-488 (510)
28 TIGR02633 xylG D-xylose ABC tr 100.0 8.3E-62 1.8E-66 594.8 42.1 221 649-887 257-487 (500)
29 PRK11288 araG L-arabinose tran 100.0 6.3E-61 1.4E-65 586.0 43.4 205 676-889 267-482 (501)
30 PTZ00243 ABC transporter; Prov 100.0 3.5E-60 7.6E-65 636.0 51.2 211 648-887 1307-1528(1560)
31 PRK10982 galactose/methyl gala 100.0 3.1E-60 6.7E-65 579.0 42.7 435 1-888 26-476 (491)
32 TIGR01271 CFTR_protein cystic 100.0 1.9E-58 4.1E-63 619.6 62.1 209 649-887 1217-1435(1490)
33 PRK10938 putative molybdenum t 100.0 2.3E-59 4.9E-64 571.8 37.4 214 649-884 260-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 2.2E-58 4.8E-63 497.6 38.1 452 2-887 39-511 (534)
35 PRK11819 putative ABC transpor 100.0 6.9E-57 1.5E-61 555.6 45.7 201 649-886 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 8.6E-57 1.9E-61 553.4 42.8 198 649-887 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.9E-56 4.1E-61 551.8 43.2 201 649-886 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 2.3E-55 5.1E-60 537.9 40.0 211 649-901 340-554 (590)
39 PRK10636 putative ABC transpor 100.0 2.5E-53 5.4E-58 528.7 45.9 197 649-887 312-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 1.3E-53 2.8E-58 533.2 43.3 202 649-887 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.4E-52 3.1E-57 482.4 40.4 432 1-884 36-482 (500)
42 PLN03073 ABC transporter F fam 100.0 1.2E-51 2.7E-56 513.2 38.0 200 649-887 508-709 (718)
43 COG0488 Uup ATPase components 100.0 2.8E-51 6.1E-56 486.8 38.6 199 648-887 320-520 (530)
44 COG3845 ABC-type uncharacteriz 100.0 1.7E-48 3.7E-53 437.1 39.9 440 1-889 32-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 6.6E-47 1.4E-51 380.9 22.2 215 649-887 2-220 (240)
46 COG1135 AbcC ABC-type metal io 100.0 2.9E-44 6.2E-49 380.4 21.3 218 650-887 2-226 (339)
47 COG1125 OpuBA ABC-type proline 100.0 9.7E-44 2.1E-48 364.2 17.8 213 650-887 2-220 (309)
48 COG1136 SalX ABC-type antimicr 100.0 5.3E-43 1.2E-47 366.8 23.5 208 650-878 2-218 (226)
49 COG1127 Ttg2A ABC-type transpo 100.0 4.1E-43 8.9E-48 359.2 21.6 229 649-901 8-248 (263)
50 COG1131 CcmA ABC-type multidru 100.0 6.3E-43 1.4E-47 393.0 24.8 224 649-900 4-230 (293)
51 COG1116 TauB ABC-type nitrate/ 100.0 4.8E-43 1E-47 365.8 21.8 204 649-878 3-207 (248)
52 COG3638 ABC-type phosphate/pho 100.0 4.6E-43 1E-47 357.8 20.0 220 649-889 3-234 (258)
53 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.8E-42 3.9E-47 367.7 24.3 216 649-889 4-224 (254)
54 COG1120 FepC ABC-type cobalami 100.0 7.1E-43 1.5E-47 373.2 20.9 218 649-888 2-224 (258)
55 COG2884 FtsE Predicted ATPase 100.0 3.5E-42 7.7E-47 338.1 19.8 212 650-886 2-220 (223)
56 COG4555 NatA ABC-type Na+ tran 100.0 9E-43 2E-47 344.9 15.4 215 650-888 2-218 (245)
57 COG3839 MalK ABC-type sugar tr 100.0 4.5E-42 9.7E-47 381.3 21.8 215 649-888 3-219 (338)
58 COG3842 PotA ABC-type spermidi 100.0 5.8E-42 1.3E-46 382.5 18.8 216 649-888 5-222 (352)
59 KOG0927 Predicted transporter 100.0 3.4E-41 7.4E-46 378.5 24.4 200 649-887 389-591 (614)
60 COG1118 CysA ABC-type sulfate/ 100.0 6.9E-42 1.5E-46 361.1 17.7 205 674-888 14-223 (345)
61 COG1117 PstB ABC-type phosphat 100.0 2.3E-41 5E-46 338.5 20.0 217 649-887 7-232 (253)
62 COG1126 GlnQ ABC-type polar am 100.0 6.6E-42 1.4E-46 344.8 15.2 203 1-256 30-237 (240)
63 TIGR01257 rim_protein retinal- 100.0 3.3E-36 7.1E-41 398.5 72.6 216 648-887 927-1144(2272)
64 PRK13537 nodulation ABC transp 100.0 5.7E-40 1.2E-44 373.2 26.6 214 649-887 7-222 (306)
65 COG3840 ThiQ ABC-type thiamine 100.0 1.6E-40 3.4E-45 323.2 17.7 196 680-887 17-214 (231)
66 TIGR02314 ABC_MetN D-methionin 100.0 9.7E-40 2.1E-44 373.4 25.9 217 650-887 2-225 (343)
67 PRK11650 ugpC glycerol-3-phosp 100.0 2E-39 4.4E-44 374.3 25.7 216 649-888 3-220 (356)
68 TIGR03265 PhnT2 putative 2-ami 100.0 2.6E-39 5.7E-44 373.0 26.3 215 649-888 4-220 (353)
69 PRK11432 fbpC ferric transport 100.0 2.9E-39 6.2E-44 371.8 25.9 215 649-888 6-222 (351)
70 cd03261 ABC_Org_Solvent_Resist 100.0 3.5E-39 7.7E-44 355.6 24.7 213 651-887 2-221 (235)
71 COG1137 YhbG ABC-type (unclass 100.0 1.4E-40 3E-45 329.1 11.9 217 649-888 4-224 (243)
72 KOG0058 Peptide exporter, ABC 100.0 6.8E-40 1.5E-44 383.8 19.9 217 648-887 464-686 (716)
73 COG1124 DppF ABC-type dipeptid 100.0 2.4E-39 5.2E-44 334.0 21.4 216 649-887 3-226 (252)
74 TIGR03258 PhnT 2-aminoethylpho 100.0 5E-39 1.1E-43 370.8 25.9 215 649-888 5-224 (362)
75 PRK13536 nodulation factor exp 100.0 8.5E-39 1.8E-43 366.8 27.2 215 648-887 40-256 (340)
76 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-39 7.7E-44 346.3 21.7 215 649-887 3-223 (235)
77 PRK10851 sulfate/thiosulfate t 100.0 1E-38 2.2E-43 368.1 25.9 217 649-887 2-221 (353)
78 cd03259 ABC_Carb_Solutes_like 100.0 8.6E-39 1.9E-43 347.1 23.9 210 651-885 2-213 (213)
79 TIGR00960 3a0501s02 Type II (G 100.0 8.2E-39 1.8E-43 348.1 23.4 208 650-880 2-215 (216)
80 PRK09452 potA putrescine/sperm 100.0 1.3E-38 2.9E-43 368.5 26.4 214 649-887 14-229 (375)
81 COG1125 OpuBA ABC-type proline 100.0 2.1E-39 4.6E-44 332.4 16.1 194 1-236 29-225 (309)
82 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.2E-38 4.8E-43 345.5 25.1 215 651-887 2-218 (220)
83 COG1135 AbcC ABC-type metal io 100.0 2.1E-39 4.5E-44 343.6 16.0 191 1-235 34-230 (339)
84 cd03269 ABC_putative_ATPase Th 100.0 2.1E-38 4.5E-43 343.3 24.3 209 651-885 2-210 (210)
85 PRK11607 potG putrescine trans 100.0 3.2E-38 7E-43 366.1 27.4 215 649-888 19-235 (377)
86 TIGR01288 nodI ATP-binding ABC 100.0 2.6E-38 5.6E-43 360.7 26.1 214 649-887 4-219 (303)
87 cd03265 ABC_DrrA DrrA is the A 100.0 2.4E-38 5.2E-43 345.3 24.4 213 650-887 1-216 (220)
88 cd03301 ABC_MalK_N The N-termi 100.0 3.3E-38 7.1E-43 342.8 24.6 210 651-885 2-213 (213)
89 PRK11000 maltose/maltodextrin 100.0 3.7E-38 8.1E-43 366.6 26.0 215 649-888 3-219 (369)
90 PRK11153 metN DL-methionine tr 100.0 3.5E-38 7.6E-43 364.0 25.6 217 650-887 2-225 (343)
91 TIGR01188 drrA daunorubicin re 100.0 2E-38 4.4E-43 361.4 23.2 202 674-887 5-208 (302)
92 cd03296 ABC_CysA_sulfate_impor 100.0 5.4E-38 1.2E-42 346.9 25.5 217 649-887 2-221 (239)
93 cd03266 ABC_NatA_sodium_export 100.0 3.7E-38 8E-43 343.7 23.9 215 650-885 2-218 (218)
94 TIGR01186 proV glycine betaine 100.0 3.3E-38 7.2E-43 362.5 24.3 203 674-888 5-215 (363)
95 TIGR03522 GldA_ABC_ATP gliding 100.0 5.8E-38 1.3E-42 357.1 25.8 213 649-887 2-216 (301)
96 COG2274 SunT ABC-type bacterio 100.0 9.7E-37 2.1E-41 374.3 38.0 216 644-887 466-691 (709)
97 cd03219 ABC_Mj1267_LivG_branch 100.0 5.8E-38 1.3E-42 346.5 24.5 215 651-887 2-227 (236)
98 cd03218 ABC_YhbG The ABC trans 100.0 5.9E-38 1.3E-42 345.5 24.3 212 651-887 2-217 (232)
99 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.3E-38 9.4E-43 343.1 22.7 209 650-880 1-217 (218)
100 cd03268 ABC_BcrA_bacitracin_re 100.0 6.2E-38 1.3E-42 339.1 23.2 206 651-885 2-208 (208)
101 cd03234 ABCG_White The White s 100.0 1.4E-37 3E-42 340.6 25.7 221 650-885 4-226 (226)
102 PRK09536 btuD corrinoid ABC tr 100.0 7.5E-38 1.6E-42 363.8 24.7 218 649-888 3-224 (402)
103 cd03260 ABC_PstB_phosphate_tra 100.0 7.8E-38 1.7E-42 343.2 23.3 213 651-887 2-224 (227)
104 TIGR02673 FtsE cell division A 100.0 9.8E-38 2.1E-42 339.3 23.6 206 650-878 2-213 (214)
105 cd03263 ABC_subfamily_A The AB 100.0 9.7E-38 2.1E-42 340.9 23.6 214 650-887 1-216 (220)
106 COG0410 LivF ABC-type branched 100.0 5.6E-38 1.2E-42 321.8 20.1 214 649-888 3-222 (237)
107 PRK13637 cbiO cobalt transport 100.0 1.5E-37 3.2E-42 351.3 25.6 219 649-887 2-229 (287)
108 PRK11629 lolD lipoprotein tran 100.0 2.5E-37 5.5E-42 340.2 26.8 217 649-887 5-229 (233)
109 cd03258 ABC_MetN_methionine_tr 100.0 1E-37 2.2E-42 343.7 23.7 217 650-887 2-225 (233)
110 cd03292 ABC_FtsE_transporter F 100.0 1.3E-37 2.7E-42 338.6 23.3 206 651-880 2-213 (214)
111 PRK13643 cbiO cobalt transport 100.0 1.7E-37 3.7E-42 351.0 25.1 217 650-887 2-228 (288)
112 PRK09493 glnQ glutamine ABC tr 100.0 2E-37 4.3E-42 342.8 25.1 214 650-887 2-220 (240)
113 cd03256 ABC_PhnC_transporter A 100.0 1.1E-37 2.3E-42 345.7 23.0 216 651-887 2-229 (241)
114 PRK11248 tauB taurine transpor 100.0 2.5E-37 5.5E-42 343.5 25.8 212 650-887 2-215 (255)
115 cd03226 ABC_cobalt_CbiO_domain 100.0 7.8E-38 1.7E-42 337.3 21.0 191 675-881 13-204 (205)
116 COG4152 ABC-type uncharacteriz 100.0 5.4E-38 1.2E-42 319.8 18.4 213 649-887 2-214 (300)
117 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2E-37 4.3E-42 343.1 24.2 213 651-887 2-220 (242)
118 PRK11264 putative amino-acid A 100.0 2.5E-37 5.4E-42 344.4 24.9 215 649-887 3-228 (250)
119 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.5E-37 3.2E-42 348.5 22.8 202 674-887 36-245 (269)
120 COG3840 ThiQ ABC-type thiamine 100.0 2.7E-38 6E-43 307.6 14.5 191 1-235 27-218 (231)
121 PRK13631 cbiO cobalt transport 100.0 3.5E-37 7.6E-42 351.4 26.1 218 649-887 21-260 (320)
122 PRK13651 cobalt transporter AT 100.0 2.6E-37 5.7E-42 350.5 24.8 219 649-887 2-249 (305)
123 PRK13647 cbiO cobalt transport 100.0 3E-37 6.6E-42 346.6 25.1 215 649-887 4-222 (274)
124 PRK13634 cbiO cobalt transport 100.0 2.6E-37 5.7E-42 349.7 24.7 218 650-887 3-230 (290)
125 cd03224 ABC_TM1139_LivF_branch 100.0 2E-37 4.3E-42 339.1 22.8 211 650-887 1-216 (222)
126 cd03264 ABC_drug_resistance_li 100.0 2.4E-37 5.2E-42 335.3 23.2 209 650-885 1-211 (211)
127 TIGR02315 ABC_phnC phosphonate 100.0 1.4E-37 3.1E-42 345.0 21.7 217 650-887 2-230 (243)
128 COG1120 FepC ABC-type cobalami 100.0 1.8E-38 4E-43 339.3 13.6 195 1-235 30-227 (258)
129 PRK11831 putative ABC transpor 100.0 4.5E-37 9.8E-42 344.9 25.5 215 649-887 7-228 (269)
130 PRK10908 cell division protein 100.0 4.4E-37 9.6E-42 335.8 24.8 209 650-882 2-216 (222)
131 PRK15079 oligopeptide ABC tran 100.0 5.2E-37 1.1E-41 351.2 26.4 229 649-887 8-246 (331)
132 COG0411 LivG ABC-type branched 100.0 9.1E-38 2E-42 322.8 18.1 218 649-888 4-235 (250)
133 COG3839 MalK ABC-type sugar tr 100.0 3.7E-38 8E-43 350.1 16.3 191 2-236 32-223 (338)
134 COG4559 ABC-type hemin transpo 100.0 1.5E-37 3.2E-42 310.4 18.8 215 650-889 2-227 (259)
135 KOG0055 Multidrug/pheromone ex 100.0 1.1E-36 2.4E-41 376.7 30.6 220 646-888 347-572 (1228)
136 TIGR02211 LolD_lipo_ex lipopro 100.0 4.7E-37 1E-41 335.7 24.4 211 650-882 2-220 (221)
137 PRK13646 cbiO cobalt transport 100.0 4.1E-37 8.9E-42 347.8 24.8 218 649-887 2-230 (286)
138 COG4988 CydD ABC-type transpor 100.0 2.3E-37 4.9E-42 356.7 22.8 213 647-888 318-539 (559)
139 KOG0057 Mitochondrial Fe/S clu 100.0 8.6E-38 1.9E-42 353.1 18.9 210 648-887 350-569 (591)
140 PRK13650 cbiO cobalt transport 100.0 3.7E-37 8E-42 346.9 24.1 216 649-887 4-224 (279)
141 COG4181 Predicted ABC-type tra 100.0 1.1E-37 2.5E-42 299.8 16.8 213 649-883 6-226 (228)
142 cd03262 ABC_HisP_GlnQ_permease 100.0 2.7E-37 5.9E-42 335.7 22.0 206 651-880 2-212 (213)
143 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7E-37 1.5E-41 337.4 25.4 212 650-887 2-216 (236)
144 COG1118 CysA ABC-type sulfate/ 100.0 8.4E-38 1.8E-42 330.2 17.1 194 1-236 30-227 (345)
145 PRK11247 ssuB aliphatic sulfon 100.0 5.4E-37 1.2E-41 339.9 24.3 206 649-887 12-218 (257)
146 cd03225 ABC_cobalt_CbiO_domain 100.0 2.8E-37 6.2E-42 334.9 21.5 193 675-878 14-210 (211)
147 PRK11124 artP arginine transpo 100.0 6.9E-37 1.5E-41 339.0 24.8 214 649-887 2-225 (242)
148 PRK10895 lipopolysaccharide AB 100.0 5.2E-37 1.1E-41 339.7 23.9 215 649-887 3-221 (241)
149 PRK13636 cbiO cobalt transport 100.0 7E-37 1.5E-41 345.3 25.0 216 649-888 5-227 (283)
150 PRK13641 cbiO cobalt transport 100.0 7.9E-37 1.7E-41 345.7 25.3 219 649-887 2-229 (287)
151 cd03257 ABC_NikE_OppD_transpor 100.0 6.6E-37 1.4E-41 336.5 23.9 217 650-885 2-228 (228)
152 TIGR00972 3a0107s01c2 phosphat 100.0 9.5E-37 2.1E-41 338.7 25.3 214 650-887 2-227 (247)
153 PRK10619 histidine/lysine/argi 100.0 1E-36 2.2E-41 340.5 25.4 214 649-887 5-236 (257)
154 cd03235 ABC_Metallic_Cations A 100.0 3.2E-37 7E-42 334.8 20.6 199 675-885 12-213 (213)
155 PRK14273 phosphate ABC transpo 100.0 1.2E-36 2.6E-41 339.3 25.6 215 649-887 7-233 (254)
156 PRK10070 glycine betaine trans 100.0 7.9E-37 1.7E-41 355.1 25.0 227 649-887 4-249 (400)
157 COG1117 PstB ABC-type phosphat 100.0 4.8E-38 1E-42 314.8 12.7 206 1-255 35-248 (253)
158 PRK11614 livF leucine/isoleuci 100.0 8.2E-37 1.8E-41 337.2 23.9 212 649-887 5-221 (237)
159 PRK13644 cbiO cobalt transport 100.0 8.3E-37 1.8E-41 343.1 24.0 213 650-887 2-219 (274)
160 COG1131 CcmA ABC-type multidru 100.0 2.1E-37 4.7E-42 348.2 18.9 195 1-239 33-229 (293)
161 PRK13635 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 342.8 24.5 215 649-887 5-224 (279)
162 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-37 2.7E-42 325.3 15.5 177 1-223 31-207 (248)
163 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-36 2.6E-41 338.9 24.6 214 650-887 1-231 (252)
164 PRK14268 phosphate ABC transpo 100.0 1.8E-36 3.9E-41 338.4 25.8 214 649-887 12-237 (258)
165 COG3842 PotA ABC-type spermidi 100.0 7.6E-38 1.6E-42 349.5 14.2 191 1-234 33-224 (352)
166 PRK14247 phosphate ABC transpo 100.0 2.1E-36 4.6E-41 336.8 25.8 217 649-887 3-229 (250)
167 PRK13548 hmuV hemin importer A 100.0 1.6E-36 3.5E-41 338.2 24.8 214 649-887 2-225 (258)
168 TIGR03740 galliderm_ABC gallid 100.0 2.1E-36 4.5E-41 330.7 25.1 208 651-888 2-209 (223)
169 COG4525 TauB ABC-type taurine 100.0 7.7E-37 1.7E-41 300.4 19.3 214 650-887 4-219 (259)
170 PRK13652 cbiO cobalt transport 100.0 2.2E-36 4.7E-41 340.6 25.4 215 649-887 3-222 (277)
171 TIGR03411 urea_trans_UrtD urea 100.0 2.1E-36 4.7E-41 335.2 25.0 216 649-887 2-226 (242)
172 PRK14267 phosphate ABC transpo 100.0 2.4E-36 5.3E-41 336.9 25.4 217 649-887 4-232 (253)
173 TIGR01978 sufC FeS assembly AT 100.0 1.9E-36 4.2E-41 336.1 24.4 219 650-887 1-229 (243)
174 PRK13638 cbiO cobalt transport 100.0 1.8E-36 3.8E-41 340.8 24.3 213 650-887 2-220 (271)
175 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-37 2.4E-42 308.8 12.7 191 1-236 30-222 (245)
176 COG3638 ABC-type phosphate/pho 100.0 3E-37 6.6E-42 315.3 16.1 199 1-236 32-237 (258)
177 TIGR03415 ABC_choXWV_ATP choli 100.0 1.7E-36 3.7E-41 349.5 24.4 204 673-888 35-250 (382)
178 PRK11300 livG leucine/isoleuci 100.0 2.4E-36 5.3E-41 337.5 25.0 217 649-887 5-238 (255)
179 PRK13649 cbiO cobalt transport 100.0 2.6E-36 5.6E-41 341.4 25.4 218 649-887 2-229 (280)
180 PRK10584 putative ABC transpor 100.0 3.7E-36 7.9E-41 330.2 25.8 213 649-883 6-226 (228)
181 PRK13632 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 339.2 25.0 215 649-887 7-226 (271)
182 PRK11231 fecE iron-dicitrate t 100.0 1.8E-36 3.9E-41 338.0 23.6 218 649-888 2-223 (255)
183 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.7E-36 3.7E-41 328.6 22.8 208 651-885 2-211 (211)
184 PRK09984 phosphonate/organopho 100.0 2.5E-36 5.5E-41 338.2 24.7 220 649-888 4-238 (262)
185 PRK11308 dppF dipeptide transp 100.0 3.7E-36 8E-41 344.1 26.1 225 649-887 5-239 (327)
186 COG1127 Ttg2A ABC-type transpo 100.0 2.9E-37 6.4E-42 316.3 15.2 193 1-236 36-235 (263)
187 PRK10575 iron-hydroxamate tran 100.0 2.2E-36 4.9E-41 338.7 23.8 217 649-887 11-232 (265)
188 cd03267 ABC_NatA_like Similar 100.0 2.5E-36 5.5E-41 332.2 23.4 201 673-885 32-236 (236)
189 cd03233 ABC_PDR_domain1 The pl 100.0 3.4E-36 7.4E-41 322.7 23.8 196 649-885 3-202 (202)
190 PRK14241 phosphate transporter 100.0 4.7E-36 1E-40 335.2 25.8 217 649-887 4-237 (258)
191 PRK11022 dppD dipeptide transp 100.0 5.3E-36 1.1E-40 343.0 26.8 221 649-887 3-238 (326)
192 PRK13639 cbiO cobalt transport 100.0 3.6E-36 7.7E-41 338.4 24.9 214 650-887 2-221 (275)
193 PRK10253 iron-enterobactin tra 100.0 2.9E-36 6.2E-41 337.9 23.8 218 649-888 7-229 (265)
194 PRK10744 pstB phosphate transp 100.0 4.7E-36 1E-40 335.4 25.4 216 648-887 12-239 (260)
195 TIGR02769 nickel_nikE nickel i 100.0 4.5E-36 9.7E-41 336.3 25.2 224 649-887 2-235 (265)
196 PRK13648 cbiO cobalt transport 100.0 4.7E-36 1E-40 336.9 25.4 216 649-888 7-227 (269)
197 PRK14242 phosphate transporter 100.0 6E-36 1.3E-40 333.8 25.9 215 649-887 6-232 (253)
198 TIGR03410 urea_trans_UrtE urea 100.0 3E-36 6.5E-41 331.3 23.1 211 650-888 1-217 (230)
199 TIGR00968 3a0106s01 sulfate AB 100.0 5.2E-36 1.1E-40 330.2 24.6 212 651-887 2-215 (237)
200 cd03232 ABC_PDR_domain2 The pl 100.0 4.7E-36 1E-40 319.1 23.4 190 649-885 3-192 (192)
201 cd03300 ABC_PotA_N PotA is an 100.0 5.7E-36 1.2E-40 329.0 24.7 212 651-887 2-215 (232)
202 TIGR01277 thiQ thiamine ABC tr 100.0 5.1E-36 1.1E-40 325.0 23.9 209 651-886 2-212 (213)
203 PRK14245 phosphate ABC transpo 100.0 7.5E-36 1.6E-40 332.2 25.6 215 649-887 3-229 (250)
204 TIGR03873 F420-0_ABC_ATP propo 100.0 3.9E-36 8.4E-41 335.5 23.3 216 650-887 2-221 (256)
205 TIGR03608 L_ocin_972_ABC putat 100.0 3.3E-36 7.2E-41 325.4 22.1 189 675-875 11-206 (206)
206 PRK14235 phosphate transporter 100.0 8.6E-36 1.9E-40 334.1 25.8 216 649-887 19-246 (267)
207 PRK13633 cobalt transporter AT 100.0 5.6E-36 1.2E-40 337.8 24.4 219 649-887 4-228 (280)
208 PRK00349 uvrA excinuclease ABC 100.0 5.3E-35 1.1E-39 368.2 35.8 123 749-887 791-922 (943)
209 COG0444 DppD ABC-type dipeptid 100.0 6.8E-36 1.5E-40 323.2 23.8 224 650-888 2-239 (316)
210 COG1136 SalX ABC-type antimicr 100.0 1.2E-36 2.7E-41 318.9 17.3 180 1-225 33-220 (226)
211 PRK14269 phosphate ABC transpo 100.0 7.4E-36 1.6E-40 331.1 24.6 216 649-887 2-225 (246)
212 PRK13640 cbiO cobalt transport 100.0 6.9E-36 1.5E-40 337.1 24.6 217 649-887 5-227 (282)
213 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-36 2.3E-41 323.7 16.8 193 1-236 32-227 (254)
214 PRK14237 phosphate transporter 100.0 1.3E-35 2.8E-40 332.7 26.4 221 647-887 18-246 (267)
215 PRK09473 oppD oligopeptide tra 100.0 1.1E-35 2.4E-40 340.5 26.5 224 649-887 12-246 (330)
216 PRK13645 cbiO cobalt transport 100.0 6.9E-36 1.5E-40 339.0 24.4 219 649-887 6-235 (289)
217 PRK13549 xylose transporter AT 100.0 5.6E-36 1.2E-40 366.7 25.6 221 649-889 5-229 (506)
218 PRK13547 hmuV hemin importer A 100.0 5.8E-36 1.3E-40 334.5 23.3 219 650-888 2-240 (272)
219 TIGR01184 ntrCD nitrate transp 100.0 4.5E-36 9.8E-41 328.9 22.0 198 678-887 1-199 (230)
220 PRK00635 excinuclease ABC subu 100.0 1.3E-34 2.8E-39 377.3 39.0 135 746-888 759-902 (1809)
221 PRK14256 phosphate ABC transpo 100.0 1.3E-35 2.9E-40 330.6 25.7 216 649-887 4-231 (252)
222 PRK14250 phosphate ABC transpo 100.0 6.2E-36 1.3E-40 330.5 22.8 209 649-887 3-216 (241)
223 PRK15093 antimicrobial peptide 100.0 1.3E-35 2.9E-40 341.2 26.0 223 649-887 3-243 (330)
224 PRK14259 phosphate ABC transpo 100.0 1E-35 2.2E-40 333.6 24.4 214 649-887 13-248 (269)
225 cd03299 ABC_ModC_like Archeal 100.0 1.3E-35 2.9E-40 326.6 24.7 211 651-887 2-214 (235)
226 cd03213 ABCG_EPDR ABCG transpo 100.0 1.5E-35 3.2E-40 315.6 23.8 190 649-885 3-194 (194)
227 PRK11144 modC molybdate transp 100.0 9.9E-36 2.1E-40 344.9 24.2 190 680-887 16-213 (352)
228 PRK10771 thiQ thiamine transpo 100.0 1.2E-35 2.7E-40 326.5 23.7 211 650-887 2-214 (232)
229 PRK14270 phosphate ABC transpo 100.0 2E-35 4.3E-40 329.0 25.4 215 649-887 4-230 (251)
230 PRK15112 antimicrobial peptide 100.0 1.4E-35 3E-40 332.4 24.3 224 649-887 4-234 (267)
231 COG4987 CydC ABC-type transpor 100.0 1.5E-36 3.2E-41 343.1 16.2 212 649-888 336-557 (573)
232 TIGR02142 modC_ABC molybdenum 100.0 1.3E-35 2.8E-40 344.6 24.4 194 680-887 15-216 (354)
233 PRK13642 cbiO cobalt transport 100.0 2E-35 4.4E-40 332.7 25.2 216 649-887 4-224 (277)
234 cd03297 ABC_ModC_molybdenum_tr 100.0 1.5E-35 3.2E-40 321.9 23.1 191 680-885 16-214 (214)
235 PRK14274 phosphate ABC transpo 100.0 2.4E-35 5.2E-40 329.7 25.5 215 649-887 12-238 (259)
236 PRK14239 phosphate transporter 100.0 2.5E-35 5.3E-40 328.8 25.4 215 649-887 5-231 (252)
237 COG4175 ProV ABC-type proline/ 100.0 2.6E-36 5.7E-41 318.5 16.4 200 677-888 43-250 (386)
238 PRK14257 phosphate ABC transpo 100.0 2.9E-35 6.2E-40 336.6 26.4 220 649-887 80-308 (329)
239 PRK14240 phosphate transporter 100.0 3.1E-35 6.8E-40 327.4 25.8 215 649-887 3-229 (250)
240 PRK13543 cytochrome c biogenes 100.0 2E-35 4.3E-40 320.3 23.3 202 649-877 11-212 (214)
241 PRK14244 phosphate ABC transpo 100.0 2.7E-35 5.9E-40 327.9 24.9 219 650-887 6-232 (251)
242 PRK14260 phosphate ABC transpo 100.0 3.3E-35 7.2E-40 328.4 25.5 216 649-887 7-238 (259)
243 PRK14272 phosphate ABC transpo 100.0 4E-35 8.7E-40 327.1 26.0 216 649-887 4-231 (252)
244 PRK14262 phosphate ABC transpo 100.0 3.9E-35 8.5E-40 326.6 25.4 215 649-887 3-229 (250)
245 PRK14236 phosphate transporter 100.0 4.9E-35 1.1E-39 328.9 26.4 215 649-887 25-251 (272)
246 COG1245 Predicted ATPase, RNas 100.0 6.5E-35 1.4E-39 320.5 26.4 173 678-876 357-530 (591)
247 PRK14253 phosphate ABC transpo 100.0 3.6E-35 7.9E-40 326.7 24.7 215 649-887 3-228 (249)
248 PRK10762 D-ribose transporter 100.0 2.3E-35 4.9E-40 360.9 25.2 219 649-889 4-227 (501)
249 TIGR02982 heterocyst_DevA ABC 100.0 4.5E-35 9.8E-40 319.3 24.8 211 650-881 2-219 (220)
250 PRK11174 cysteine/glutathione 100.0 8.9E-36 1.9E-40 373.1 21.8 209 649-887 349-567 (588)
251 PRK14271 phosphate ABC transpo 100.0 7.3E-35 1.6E-39 327.4 26.9 219 649-887 21-246 (276)
252 KOG0062 ATPase component of AB 100.0 2.1E-35 4.6E-40 330.2 22.2 203 648-887 361-564 (582)
253 PRK10247 putative ABC transpor 100.0 2.3E-35 5E-40 322.4 21.7 210 649-886 7-221 (225)
254 TIGR02770 nickel_nikD nickel i 100.0 2.5E-35 5.4E-40 323.5 22.0 201 677-887 1-210 (230)
255 PRK11701 phnK phosphonate C-P 100.0 5.3E-35 1.2E-39 326.7 25.1 215 649-887 6-236 (258)
256 PRK14248 phosphate ABC transpo 100.0 6.2E-35 1.3E-39 327.9 25.7 215 649-887 21-247 (268)
257 PRK14258 phosphate ABC transpo 100.0 7.7E-35 1.7E-39 325.6 26.3 217 649-887 7-240 (261)
258 PRK10418 nikD nickel transport 100.0 5.9E-35 1.3E-39 325.3 25.2 213 649-887 4-225 (254)
259 cd03231 ABC_CcmA_heme_exporter 100.0 2.8E-35 6.1E-40 315.8 21.5 195 651-875 2-198 (201)
260 PRK14275 phosphate ABC transpo 100.0 6.3E-35 1.4E-39 329.7 25.4 215 649-887 39-265 (286)
261 PRK14254 phosphate ABC transpo 100.0 1E-34 2.2E-39 327.5 27.1 213 649-887 39-264 (285)
262 PRK13538 cytochrome c biogenes 100.0 3.3E-35 7.1E-40 316.3 22.0 199 650-875 2-202 (204)
263 COG1132 MdlB ABC-type multidru 100.0 7.5E-36 1.6E-40 371.4 19.4 214 649-887 328-547 (567)
264 PRK09700 D-allose transporter 100.0 3.3E-35 7.1E-40 360.7 24.5 219 649-889 5-231 (510)
265 TIGR00630 uvra excinuclease AB 100.0 8.1E-34 1.8E-38 356.8 37.3 123 749-887 789-920 (924)
266 PRK14261 phosphate ABC transpo 100.0 7.8E-35 1.7E-39 324.6 25.1 215 649-887 6-232 (253)
267 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.9E-35 4.1E-40 375.7 22.8 208 649-887 451-668 (686)
268 PRK14251 phosphate ABC transpo 100.0 8.6E-35 1.9E-39 324.1 25.3 215 649-887 4-230 (251)
269 COG4598 HisP ABC-type histidin 100.0 4.4E-36 9.5E-41 290.6 12.8 216 649-888 6-237 (256)
270 CHL00131 ycf16 sulfate ABC tra 100.0 1.3E-34 2.8E-39 323.0 26.2 220 649-887 7-236 (252)
271 PRK14255 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 323.2 25.7 215 649-887 5-231 (252)
272 PRK15056 manganese/iron transp 100.0 6.7E-35 1.5E-39 327.8 23.8 218 649-888 6-226 (272)
273 PRK14249 phosphate ABC transpo 100.0 1.1E-34 2.5E-39 322.9 25.4 215 649-887 4-230 (251)
274 COG4161 ArtP ABC-type arginine 100.0 2.1E-35 4.6E-40 280.5 16.5 216 649-888 2-226 (242)
275 PRK10419 nikE nickel transport 100.0 9.4E-35 2E-39 325.7 24.6 225 649-888 3-237 (268)
276 PRK14238 phosphate transporter 100.0 1.1E-34 2.4E-39 325.6 25.1 215 649-887 24-250 (271)
277 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.7E-35 1E-39 326.2 21.9 211 649-888 2-221 (275)
278 KOG0058 Peptide exporter, ABC 100.0 5.4E-36 1.2E-40 351.2 14.9 193 1-236 496-691 (716)
279 cd03252 ABCC_Hemolysin The ABC 100.0 2E-35 4.4E-40 326.3 18.7 209 651-887 2-220 (237)
280 TIGR02633 xylG D-xylose ABC tr 100.0 7.8E-35 1.7E-39 356.8 25.7 220 650-889 2-227 (500)
281 KOG0056 Heavy metal exporter H 100.0 6.2E-36 1.3E-40 328.7 14.2 217 646-887 534-756 (790)
282 PRK15439 autoinducer 2 ABC tra 100.0 7.1E-35 1.5E-39 356.6 24.9 211 649-888 11-225 (510)
283 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 9E-35 2E-39 317.0 23.0 191 674-885 34-224 (224)
284 PRK11176 lipid transporter ATP 100.0 3.9E-35 8.5E-40 367.1 23.0 212 649-887 341-562 (582)
285 PRK14265 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 324.9 25.1 214 649-887 20-253 (274)
286 PRK13539 cytochrome c biogenes 100.0 7.2E-35 1.6E-39 314.1 21.7 198 649-876 2-199 (207)
287 TIGR01166 cbiO cobalt transpor 100.0 5.7E-35 1.2E-39 311.0 20.7 179 674-862 4-188 (190)
288 PRK10790 putative multidrug tr 100.0 7.4E-35 1.6E-39 364.8 25.2 209 649-887 340-558 (592)
289 cd03230 ABC_DR_subfamily_A Thi 100.0 7.3E-35 1.6E-39 304.7 20.8 168 651-878 2-171 (173)
290 PRK11160 cysteine/glutathione 100.0 6.1E-35 1.3E-39 362.3 23.3 211 649-887 338-557 (574)
291 PRK11288 araG L-arabinose tran 100.0 1.1E-34 2.4E-39 354.9 25.0 216 649-886 4-223 (501)
292 COG4618 ArpD ABC-type protease 100.0 2.4E-35 5.3E-40 329.6 17.5 231 641-900 326-564 (580)
293 PRK14246 phosphate ABC transpo 100.0 2.2E-34 4.7E-39 320.3 25.2 216 649-887 10-236 (257)
294 PRK14263 phosphate ABC transpo 100.0 2.6E-34 5.7E-39 320.5 25.8 219 648-887 7-240 (261)
295 COG1123 ATPase components of v 100.0 1.6E-34 3.4E-39 335.3 24.8 224 649-888 5-240 (539)
296 COG1122 CbiO ABC-type cobalt t 100.0 2.9E-35 6.3E-40 316.1 17.1 191 2-236 33-228 (235)
297 TIGR01189 ccmA heme ABC export 100.0 1.2E-34 2.6E-39 310.6 21.5 194 651-874 2-197 (198)
298 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.5E-35 7.5E-40 375.1 20.6 209 649-887 477-695 (710)
299 TIGR02323 CP_lyasePhnK phospho 100.0 2.3E-34 5E-39 321.0 24.6 215 649-887 3-233 (253)
300 TIGR00958 3a01208 Conjugate Tr 100.0 5.2E-35 1.1E-39 371.0 22.0 210 649-887 478-697 (711)
301 PRK14243 phosphate transporter 100.0 2.2E-34 4.8E-39 322.1 24.2 214 649-887 10-243 (264)
302 PRK14266 phosphate ABC transpo 100.0 2.9E-34 6.2E-39 319.7 24.7 219 649-887 3-229 (250)
303 PRK13546 teichoic acids export 100.0 4.3E-34 9.3E-39 317.7 25.8 218 648-887 3-227 (264)
304 PRK13540 cytochrome c biogenes 100.0 1.7E-34 3.6E-39 309.7 21.7 194 650-873 2-197 (200)
305 COG1129 MglA ABC-type sugar tr 100.0 2.2E-34 4.7E-39 332.2 24.1 229 649-899 8-243 (500)
306 PRK09580 sufC cysteine desulfu 100.0 3.8E-34 8.2E-39 318.6 25.3 219 650-887 2-230 (248)
307 COG0396 sufC Cysteine desulfur 100.0 6.3E-34 1.4E-38 289.9 24.5 230 649-902 3-239 (251)
308 COG4604 CeuD ABC-type enteroch 100.0 7.3E-36 1.6E-40 294.3 10.0 216 650-888 2-221 (252)
309 cd03251 ABCC_MsbA MsbA is an e 100.0 5.3E-35 1.2E-39 322.5 18.1 209 651-887 2-220 (234)
310 PRK14252 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 319.9 26.3 214 649-887 16-244 (265)
311 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.9E-35 1.1E-39 323.5 17.8 206 651-887 2-221 (238)
312 PRK03695 vitamin B12-transport 100.0 1.9E-34 4E-39 319.7 22.3 197 677-887 11-217 (248)
313 PRK10982 galactose/methyl gala 100.0 1.2E-34 2.7E-39 353.9 23.0 206 675-889 11-220 (491)
314 cd03245 ABCC_bacteriocin_expor 100.0 1.1E-34 2.3E-39 316.9 20.1 210 649-885 2-220 (220)
315 TIGR03375 type_I_sec_LssB type 100.0 1E-34 2.2E-39 369.5 23.1 211 649-887 463-683 (694)
316 TIGR02324 CP_lyasePhnL phospho 100.0 2.9E-34 6.2E-39 314.3 23.4 210 650-876 2-223 (224)
317 COG2884 FtsE Predicted ATPase 100.0 4.9E-35 1.1E-39 287.9 15.4 185 1-230 30-220 (223)
318 PRK11650 ugpC glycerol-3-phosp 100.0 8.3E-35 1.8E-39 336.0 19.8 191 1-235 32-223 (356)
319 TIGR02314 ABC_MetN D-methionin 100.0 6.8E-35 1.5E-39 333.6 18.6 191 1-235 33-229 (343)
320 TIGR01846 type_I_sec_HlyB type 100.0 7.1E-33 1.5E-37 352.3 38.5 212 648-887 454-675 (694)
321 TIGR01193 bacteriocin_ABC ABC- 100.0 8.7E-35 1.9E-39 370.9 21.0 210 649-887 473-692 (708)
322 COG4619 ABC-type uncharacteriz 100.0 1.7E-35 3.8E-40 283.8 10.8 191 673-877 14-209 (223)
323 PRK11432 fbpC ferric transport 100.0 9.1E-35 2E-39 334.6 18.9 191 1-235 34-225 (351)
324 TIGR01186 proV glycine betaine 100.0 9.1E-35 2E-39 334.1 18.8 192 1-236 21-219 (363)
325 cd03229 ABC_Class3 This class 100.0 1.7E-34 3.6E-39 303.5 19.2 170 651-878 2-177 (178)
326 cd03254 ABCC_Glucan_exporter_l 100.0 1.1E-34 2.5E-39 318.7 18.5 211 649-887 2-221 (229)
327 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-34 3.1E-39 333.7 19.9 192 1-236 32-224 (353)
328 COG1137 YhbG ABC-type (unclass 100.0 1.9E-35 4.2E-40 292.6 10.7 193 1-236 32-228 (243)
329 COG0410 LivF ABC-type branched 100.0 1.9E-34 4.1E-39 295.9 17.5 191 1-236 31-226 (237)
330 PRK14264 phosphate ABC transpo 100.0 1E-33 2.3E-38 322.5 25.6 221 649-887 45-284 (305)
331 PRK13537 nodulation ABC transp 100.0 2.1E-34 4.5E-39 327.7 19.6 191 1-236 35-227 (306)
332 TIGR03269 met_CoM_red_A2 methy 100.0 6E-34 1.3E-38 350.4 25.1 215 650-887 1-253 (520)
333 PRK13545 tagH teichoic acids e 100.0 1E-33 2.2E-38 330.0 25.1 208 649-888 21-228 (549)
334 cd03217 ABC_FeS_Assembly ABC-t 100.0 6.3E-34 1.4E-38 304.9 21.6 184 650-887 1-189 (200)
335 PRK09544 znuC high-affinity zi 100.0 7.5E-34 1.6E-38 314.3 22.7 198 649-887 4-204 (251)
336 cd03248 ABCC_TAP TAP, the Tran 100.0 1.6E-34 3.5E-39 316.7 17.2 207 649-880 11-225 (226)
337 TIGR03258 PhnT 2-aminoethylpho 100.0 2E-34 4.4E-39 332.6 18.7 192 1-236 33-228 (362)
338 cd03215 ABC_Carb_Monos_II This 100.0 5.7E-34 1.2E-38 300.6 20.5 171 649-880 4-181 (182)
339 TIGR01842 type_I_sec_PrtD type 100.0 4E-34 8.7E-39 353.9 22.3 212 649-887 316-537 (544)
340 PRK10261 glutathione transport 100.0 7.1E-34 1.5E-38 354.4 24.4 219 649-887 12-253 (623)
341 PRK09452 potA putrescine/sperm 100.0 2.9E-34 6.2E-39 332.4 19.3 191 1-235 42-233 (375)
342 cd03244 ABCC_MRP_domain2 Domai 100.0 5.4E-34 1.2E-38 311.5 20.4 209 649-886 2-220 (221)
343 PRK15134 microcin C ABC transp 100.0 1.3E-33 2.7E-38 347.9 25.9 221 649-887 5-241 (529)
344 cd03247 ABCC_cytochrome_bd The 100.0 5.3E-34 1.1E-38 299.9 19.2 176 650-885 1-178 (178)
345 cd03253 ABCC_ATM1_transporter 100.0 3.6E-34 7.9E-39 316.3 18.8 208 651-887 2-219 (236)
346 COG1124 DppF ABC-type dipeptid 100.0 2.1E-34 4.6E-39 297.4 15.7 190 2-236 36-231 (252)
347 COG4148 ModC ABC-type molybdat 100.0 9E-35 2E-39 301.5 12.9 190 680-887 16-213 (352)
348 cd03246 ABCC_Protease_Secretio 100.0 7.5E-34 1.6E-38 297.1 19.7 168 651-880 2-172 (173)
349 COG0411 LivG ABC-type branched 100.0 1.3E-34 2.9E-39 299.3 13.3 204 1-236 32-239 (250)
350 PRK13657 cyclic beta-1,2-gluca 100.0 6.4E-34 1.4E-38 355.7 22.0 210 649-887 334-553 (588)
351 COG2274 SunT ABC-type bacterio 100.0 1.6E-34 3.5E-39 354.8 15.9 192 2-236 502-696 (709)
352 TIGR01188 drrA daunorubicin re 100.0 5.8E-34 1.3E-38 324.8 19.3 191 1-236 21-213 (302)
353 TIGR02868 CydC thiol reductant 100.0 3E-34 6.5E-39 354.7 18.4 187 649-861 334-529 (529)
354 KOG0066 eIF2-interacting prote 100.0 4.4E-33 9.6E-38 301.9 24.5 201 648-888 585-787 (807)
355 cd03261 ABC_Org_Solvent_Resist 100.0 9.4E-34 2E-38 312.4 19.3 192 1-235 28-225 (235)
356 PRK11607 potG putrescine trans 100.0 9.7E-34 2.1E-38 328.8 20.2 191 1-235 47-238 (377)
357 COG4175 ProV ABC-type proline/ 100.0 1.9E-34 4.1E-39 304.5 12.8 192 1-236 56-254 (386)
358 TIGR02203 MsbA_lipidA lipid A 100.0 8E-34 1.7E-38 355.0 20.9 212 649-887 330-551 (571)
359 PRK10851 sulfate/thiosulfate t 100.0 6.9E-34 1.5E-38 328.0 18.5 196 1-236 30-226 (353)
360 COG1119 ModF ABC-type molybden 100.0 1.1E-33 2.3E-38 292.4 17.0 217 648-886 30-256 (257)
361 cd03214 ABC_Iron-Siderophores_ 100.0 8.8E-34 1.9E-38 298.6 16.8 175 652-885 2-180 (180)
362 PRK13536 nodulation factor exp 100.0 1.7E-33 3.7E-38 323.1 20.3 191 1-236 69-261 (340)
363 PRK13541 cytochrome c biogenes 100.0 3.6E-33 7.7E-38 298.2 21.3 191 650-872 2-192 (195)
364 cd03369 ABCC_NFT1 Domain 2 of 100.0 3.4E-33 7.4E-38 301.7 21.2 198 649-886 6-206 (207)
365 PRK11000 maltose/maltodextrin 100.0 1.6E-33 3.5E-38 327.8 19.9 191 1-235 31-222 (369)
366 cd03288 ABCC_SUR2 The SUR doma 100.0 1E-33 2.2E-38 315.8 17.3 210 649-887 19-238 (257)
367 cd03223 ABCD_peroxisomal_ALDP 100.0 3.1E-33 6.7E-38 289.7 19.7 164 651-880 2-165 (166)
368 TIGR03771 anch_rpt_ABC anchore 100.0 2.7E-33 5.8E-38 305.4 20.3 194 683-888 1-197 (223)
369 PRK10789 putative multidrug tr 100.0 2E-33 4.4E-38 348.8 21.8 211 649-887 313-533 (569)
370 TIGR02857 CydD thiol reductant 100.0 1.3E-33 2.9E-38 349.0 19.3 200 649-875 320-529 (529)
371 COG4148 ModC ABC-type molybdat 100.0 5.2E-34 1.1E-38 295.9 12.9 186 1-236 26-218 (352)
372 PRK10938 putative molybdenum t 100.0 2.4E-33 5.1E-38 342.8 21.0 206 649-887 3-219 (490)
373 TIGR01192 chvA glucan exporter 100.0 4E-33 8.7E-38 346.5 23.2 210 649-887 334-553 (585)
374 COG3845 ABC-type uncharacteriz 100.0 4.1E-33 8.9E-38 313.5 20.7 216 649-886 4-223 (501)
375 COG4988 CydD ABC-type transpor 100.0 1.2E-33 2.5E-38 326.1 16.7 186 1-236 349-543 (559)
376 PRK11153 metN DL-methionine tr 100.0 3E-33 6.5E-38 323.1 19.9 191 1-235 33-229 (343)
377 cd03265 ABC_DrrA DrrA is the A 100.0 3.6E-33 7.8E-38 304.5 18.9 190 1-234 28-219 (220)
378 PRK10535 macrolide transporter 100.0 5.5E-32 1.2E-36 338.5 32.2 217 649-887 4-227 (648)
379 TIGR02204 MsbA_rel ABC transpo 100.0 2.6E-33 5.7E-38 350.5 20.1 212 649-887 337-558 (576)
380 cd03216 ABC_Carb_Monos_I This 100.0 7.1E-33 1.5E-37 286.1 19.7 158 650-883 1-162 (163)
381 PRK10070 glycine betaine trans 100.0 4.5E-33 9.7E-38 323.7 19.9 191 1-235 56-253 (400)
382 cd03250 ABCC_MRP_domain1 Domai 100.0 6.6E-33 1.4E-37 298.7 19.7 195 650-878 1-203 (204)
383 cd03259 ABC_Carb_Solutes_like 100.0 4.8E-33 1E-37 302.1 18.4 185 1-229 28-213 (213)
384 KOG0057 Mitochondrial Fe/S clu 100.0 1.5E-33 3.2E-38 318.9 14.7 191 2-236 381-574 (591)
385 PRK10522 multidrug transporter 100.0 8.1E-33 1.8E-37 342.1 22.0 208 649-886 322-533 (547)
386 KOG0059 Lipid exporter ABCA1 a 100.0 1.8E-31 3.9E-36 342.3 35.1 224 649-900 564-791 (885)
387 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.6E-33 1.9E-37 310.0 19.9 191 1-235 52-249 (269)
388 cd03228 ABCC_MRP_Like The MRP 100.0 7.3E-33 1.6E-37 289.0 18.0 166 651-878 2-170 (171)
389 cd03296 ABC_CysA_sulfate_impor 100.0 8E-33 1.7E-37 305.7 19.3 195 1-235 30-225 (239)
390 PRK13637 cbiO cobalt transport 100.0 1.1E-32 2.4E-37 311.5 20.7 192 1-236 35-234 (287)
391 TIGR01288 nodI ATP-binding ABC 100.0 7.8E-33 1.7E-37 315.6 19.6 191 1-236 32-224 (303)
392 cd03290 ABCC_SUR1_N The SUR do 100.0 1.5E-32 3.3E-37 299.2 20.8 187 675-877 14-216 (218)
393 TIGR01187 potA spermidine/putr 100.0 1.1E-32 2.5E-37 316.1 20.6 184 693-888 1-186 (325)
394 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.1E-32 2.3E-37 300.8 19.2 186 1-232 32-219 (220)
395 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-32 2.6E-37 304.1 19.5 200 1-235 28-231 (236)
396 cd03258 ABC_MetN_methionine_tr 100.0 1.2E-32 2.6E-37 303.4 19.0 191 1-235 33-229 (233)
397 cd03237 ABC_RNaseL_inhibitor_d 100.0 3.1E-32 6.8E-37 299.8 21.8 200 677-901 9-216 (246)
398 COG4525 TauB ABC-type taurine 100.0 1.1E-32 2.4E-37 271.2 16.1 190 2-237 34-225 (259)
399 TIGR03522 GldA_ABC_ATP gliding 100.0 1.2E-32 2.6E-37 313.4 19.1 190 1-236 30-221 (301)
400 PRK11144 modC molybdate transp 100.0 1.1E-32 2.3E-37 319.7 18.7 186 1-236 26-218 (352)
401 COG5265 ATM1 ABC-type transpor 100.0 2.2E-33 4.8E-38 307.0 12.1 217 646-887 259-481 (497)
402 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-32 3.2E-37 317.0 19.6 192 1-236 52-254 (382)
403 cd03218 ABC_YhbG The ABC trans 100.0 1.7E-32 3.6E-37 302.2 19.1 190 1-235 28-221 (232)
404 TIGR00960 3a0501s02 Type II (G 100.0 1E-32 2.2E-37 300.2 17.0 180 1-225 31-216 (216)
405 cd03256 ABC_PhnC_transporter A 100.0 1.8E-32 3.8E-37 304.0 19.0 199 1-235 29-233 (241)
406 TIGR02142 modC_ABC molybdenum 100.0 1.3E-32 2.9E-37 319.5 18.6 190 1-236 25-221 (354)
407 PRK13634 cbiO cobalt transport 100.0 2E-32 4.4E-37 309.9 19.6 191 1-235 35-234 (290)
408 PRK09536 btuD corrinoid ABC tr 100.0 9.2E-33 2E-37 321.3 17.1 194 1-235 31-227 (402)
409 TIGR01187 potA spermidine/putr 100.0 1.7E-32 3.7E-37 314.7 19.1 188 4-235 1-189 (325)
410 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-32 5.1E-37 296.8 18.8 185 1-229 28-213 (213)
411 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-32 2.7E-37 296.9 16.3 177 1-226 28-205 (205)
412 PRK13643 cbiO cobalt transport 100.0 1.9E-32 4.2E-37 309.7 18.7 202 1-247 34-247 (288)
413 cd03268 ABC_BcrA_bacitracin_re 100.0 1.6E-32 3.4E-37 296.9 17.1 180 1-229 28-208 (208)
414 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.6E-32 5.7E-37 302.2 19.1 191 1-235 29-224 (242)
415 PRK11174 cysteine/glutathione 100.0 9.5E-33 2.1E-37 345.8 17.3 192 1-236 378-572 (588)
416 cd03269 ABC_putative_ATPase Th 100.0 2E-32 4.4E-37 296.5 17.6 183 1-229 28-210 (210)
417 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.8E-32 3.8E-37 299.0 17.1 180 1-225 32-218 (218)
418 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.6E-31 3.4E-36 299.1 24.7 197 648-887 38-242 (282)
419 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.1E-32 9E-37 335.7 22.0 210 648-883 336-550 (555)
420 cd03263 ABC_subfamily_A The AB 100.0 2.6E-32 5.7E-37 298.0 17.8 188 1-234 30-219 (220)
421 PRK15079 oligopeptide ABC tran 100.0 4.3E-32 9.2E-37 310.7 20.2 194 1-236 49-251 (331)
422 PRK13650 cbiO cobalt transport 100.0 3.6E-32 7.8E-37 306.4 19.3 190 1-235 35-228 (279)
423 PRK11629 lolD lipoprotein tran 100.0 3.2E-32 6.9E-37 299.7 18.4 186 1-231 37-229 (233)
424 TIGR02315 ABC_phnC phosphonate 100.0 2.6E-32 5.5E-37 302.9 17.8 198 1-234 30-233 (243)
425 PRK13647 cbiO cobalt transport 100.0 4.4E-32 9.5E-37 304.8 19.9 189 1-234 33-225 (274)
426 PRK11831 putative ABC transpor 100.0 4.3E-32 9.4E-37 304.6 19.8 192 1-235 35-232 (269)
427 cd03224 ABC_TM1139_LivF_branch 100.0 2.7E-32 6E-37 298.4 17.5 188 1-235 28-220 (222)
428 cd03266 ABC_NatA_sodium_export 100.0 2.8E-32 6E-37 297.4 17.4 184 1-229 33-218 (218)
429 cd03260 ABC_PstB_phosphate_tra 100.0 2.3E-32 5E-37 299.8 16.9 189 1-233 28-226 (227)
430 COG4674 Uncharacterized ABC-ty 100.0 2.5E-32 5.3E-37 269.0 15.1 217 649-888 5-231 (249)
431 cd03264 ABC_drug_resistance_li 100.0 3.2E-32 7E-37 295.2 17.6 183 1-229 27-211 (211)
432 cd03234 ABCG_White The White s 100.0 6.6E-32 1.4E-36 295.7 19.7 191 1-229 35-226 (226)
433 PRK13631 cbiO cobalt transport 100.0 4.8E-32 1E-36 309.2 19.2 189 1-235 54-264 (320)
434 PRK13651 cobalt transporter AT 100.0 2.2E-32 4.8E-37 310.2 16.2 190 1-235 35-253 (305)
435 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.1E-32 6.7E-37 295.3 16.5 185 1-229 26-211 (211)
436 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.8E-32 1.7E-36 297.2 20.0 191 1-236 29-221 (236)
437 TIGR01184 ntrCD nitrate transp 100.0 5.8E-32 1.3E-36 296.4 18.7 189 1-233 13-201 (230)
438 PRK13646 cbiO cobalt transport 100.0 4.4E-32 9.5E-37 306.8 18.2 191 1-236 35-235 (286)
439 COG4559 ABC-type hemin transpo 100.0 2.3E-32 4.9E-37 273.3 13.8 192 1-235 29-229 (259)
440 PRK15177 Vi polysaccharide exp 100.0 7.5E-32 1.6E-36 291.2 19.1 194 677-900 2-196 (213)
441 PRK11264 putative amino-acid A 100.0 8.5E-32 1.8E-36 300.0 19.5 191 1-235 31-232 (250)
442 PTZ00265 multidrug resistance 100.0 6.8E-32 1.5E-36 360.3 22.1 214 649-878 382-655 (1466)
443 PRK11819 putative ABC transpor 100.0 1.6E-31 3.6E-36 330.1 23.8 206 649-887 6-245 (556)
444 PRK09493 glnQ glutamine ABC tr 100.0 9.8E-32 2.1E-36 297.4 19.0 190 1-235 29-224 (240)
445 PRK10771 thiQ thiamine transpo 100.0 7.2E-32 1.6E-36 296.6 17.7 192 1-236 27-219 (232)
446 cd03297 ABC_ModC_molybdenum_tr 100.0 5.7E-32 1.2E-36 293.7 16.5 183 1-229 25-214 (214)
447 TIGR02770 nickel_nikD nickel i 100.0 1.3E-31 2.7E-36 294.2 18.9 194 1-235 14-214 (230)
448 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-31 2.8E-36 294.5 19.0 187 1-229 33-228 (228)
449 PRK11247 ssuB aliphatic sulfon 100.0 7.1E-32 1.5E-36 299.0 16.9 180 1-232 40-219 (257)
450 PRK13636 cbiO cobalt transport 100.0 9.2E-32 2E-36 303.7 18.2 192 1-236 34-231 (283)
451 PRK11248 tauB taurine transpor 100.0 1.3E-31 2.9E-36 297.6 19.1 186 1-232 29-216 (255)
452 COG4586 ABC-type uncharacteriz 100.0 5.2E-32 1.1E-36 280.9 14.5 202 674-887 36-241 (325)
453 PRK15064 ABC transporter ATP-b 100.0 2E-31 4.4E-36 328.4 22.2 205 650-887 2-237 (530)
454 TIGR02211 LolD_lipo_ex lipopro 100.0 1.2E-31 2.7E-36 292.9 18.0 181 1-226 33-220 (221)
455 PRK13641 cbiO cobalt transport 100.0 1.2E-31 2.5E-36 303.5 18.4 190 1-235 35-233 (287)
456 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-31 2.4E-36 295.1 17.6 187 1-234 28-219 (230)
457 COG4604 CeuD ABC-type enteroch 100.0 9.6E-33 2.1E-37 272.4 7.8 194 1-236 29-225 (252)
458 PRK13635 cbiO cobalt transport 100.0 1.3E-31 2.9E-36 301.5 18.0 190 1-235 35-228 (279)
459 cd03292 ABC_FtsE_transporter F 100.0 1.3E-31 2.9E-36 291.3 17.4 180 1-225 29-214 (214)
460 TIGR02673 FtsE cell division A 100.0 1.5E-31 3.2E-36 290.8 17.6 179 1-224 30-214 (214)
461 PRK10895 lipopolysaccharide AB 100.0 1.9E-31 4.1E-36 295.3 18.7 191 1-235 31-225 (241)
462 PRK13652 cbiO cobalt transport 100.0 1.9E-31 4E-36 300.5 19.0 191 1-235 32-226 (277)
463 PRK11308 dppF dipeptide transp 100.0 2.5E-31 5.4E-36 304.3 19.9 193 1-236 43-244 (327)
464 PRK09473 oppD oligopeptide tra 100.0 2.8E-31 6E-36 304.3 20.1 199 1-236 44-251 (330)
465 PRK13548 hmuV hemin importer A 100.0 2.3E-31 4.9E-36 296.8 18.8 191 1-235 30-229 (258)
466 TIGR03740 galliderm_ABC gallid 100.0 2.3E-31 4.9E-36 291.0 18.4 183 1-233 28-210 (223)
467 TIGR01277 thiQ thiamine ABC tr 100.0 2.1E-31 4.6E-36 288.9 18.0 186 1-230 26-212 (213)
468 COG4598 HisP ABC-type histidin 100.0 4.9E-32 1.1E-36 262.6 11.4 191 1-235 34-240 (256)
469 TIGR00972 3a0107s01c2 phosphat 100.0 2.7E-31 5.9E-36 295.0 19.1 192 1-235 29-231 (247)
470 PRK11300 livG leucine/isoleuci 100.0 2.5E-31 5.5E-36 297.1 19.0 206 1-235 33-242 (255)
471 cd03233 ABC_PDR_domain1 The pl 100.0 2.2E-31 4.8E-36 285.5 17.7 166 1-229 35-202 (202)
472 PRK13648 cbiO cobalt transport 100.0 3.5E-31 7.5E-36 297.5 20.0 190 1-235 37-230 (269)
473 PRK11614 livF leucine/isoleuci 100.0 1.7E-31 3.7E-36 294.9 16.6 188 1-235 33-225 (237)
474 TIGR03005 ectoine_ehuA ectoine 100.0 3.7E-31 7.9E-36 294.9 19.4 191 1-235 28-235 (252)
475 COG1132 MdlB ABC-type multidru 100.0 1.2E-31 2.6E-36 333.8 17.3 193 1-236 357-552 (567)
476 PRK09984 phosphonate/organopho 100.0 2E-31 4.4E-36 298.6 17.4 201 1-234 32-240 (262)
477 TIGR02769 nickel_nikE nickel i 100.0 3.9E-31 8.5E-36 296.4 19.7 191 1-235 39-239 (265)
478 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5E-31 1.1E-35 325.8 22.7 206 649-887 4-243 (552)
479 PRK14250 phosphate ABC transpo 100.0 2E-31 4.4E-36 294.5 17.2 186 1-235 31-220 (241)
480 cd03299 ABC_ModC_like Archeal 100.0 4.1E-31 8.9E-36 290.9 19.4 191 1-235 27-218 (235)
481 PRK13633 cobalt transporter AT 100.0 3.4E-31 7.4E-36 298.9 19.1 191 1-236 38-233 (280)
482 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-31 4.8E-36 288.7 16.7 179 1-224 29-211 (211)
483 PRK13638 cbiO cobalt transport 100.0 3.4E-31 7.4E-36 297.9 18.6 190 1-235 29-224 (271)
484 PRK13644 cbiO cobalt transport 100.0 2.6E-31 5.6E-36 298.6 17.6 189 1-235 30-223 (274)
485 PRK13632 cbiO cobalt transport 100.0 3E-31 6.5E-36 298.1 18.1 190 1-235 37-230 (271)
486 COG4181 Predicted ABC-type tra 100.0 2.7E-31 5.9E-36 255.9 15.1 181 2-227 39-226 (228)
487 PRK11176 lipid transporter ATP 100.0 1.4E-31 3E-36 335.1 17.1 193 2-236 372-567 (582)
488 PRK14247 phosphate ABC transpo 100.0 5.1E-31 1.1E-35 293.5 19.8 194 1-235 31-233 (250)
489 PRK10908 cell division protein 100.0 3.6E-31 7.8E-36 289.2 18.1 181 1-226 30-216 (222)
490 PRK13649 cbiO cobalt transport 100.0 5.4E-31 1.2E-35 298.0 20.1 190 1-235 35-233 (280)
491 PRK10584 putative ABC transpor 100.0 5.1E-31 1.1E-35 289.4 18.9 183 1-228 38-227 (228)
492 PRK10790 putative multidrug tr 100.0 2.5E-31 5.4E-36 333.0 18.7 192 1-236 369-563 (592)
493 PRK10619 histidine/lysine/argi 100.0 5.8E-31 1.3E-35 294.0 19.7 190 1-235 33-240 (257)
494 PRK11022 dppD dipeptide transp 100.0 5.5E-31 1.2E-35 301.7 19.9 196 1-236 35-243 (326)
495 PRK13645 cbiO cobalt transport 100.0 3.3E-31 7.2E-36 300.7 17.9 191 1-235 39-239 (289)
496 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-31 3.7E-36 339.5 17.4 189 2-236 482-673 (686)
497 COG4136 ABC-type uncharacteriz 100.0 2.9E-31 6.2E-36 249.7 14.3 191 649-861 2-195 (213)
498 PRK13640 cbiO cobalt transport 100.0 3.3E-31 7.2E-36 299.0 17.7 193 1-235 35-231 (282)
499 TIGR03411 urea_trans_UrtD urea 100.0 4.2E-31 9.1E-36 292.9 18.2 197 1-235 30-230 (242)
500 PRK14267 phosphate ABC transpo 100.0 6.1E-31 1.3E-35 293.5 19.6 194 1-235 32-236 (253)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-194 Score=1761.48 Aligned_cols=1212 Identities=50% Similarity=0.874 Sum_probs=1098.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
|+.++||+||||||||++|+|..+......|+|++||++.++...++.++|++|+|.|++.+||||+|.|+++|++...+
T Consensus 143 m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r 222 (1391)
T KOG0065|consen 143 MTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSR 222 (1391)
T ss_pred eEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccc
Confidence 58899999999999999999999876566889999999998877788999999999999999999999999999987554
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
.. +..+.++.. ..+|.+++.+||++|+||.||++.+||+||||||||++|.++
T Consensus 223 ~~----~~~R~e~~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~ 275 (1391)
T KOG0065|consen 223 YD----EVSRREKLA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEML 275 (1391)
T ss_pred cc----cccHHHHHH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeee
Confidence 31 222322211 147899999999999999999999999999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHHHHh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEFFES 240 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~f~~ 240 (1250)
+.+++++++||+|+|||+.++.++++.|+++++..+.|.+++++|++++++++||+|++|.+|+++|+||.+++++||++
T Consensus 276 v~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~ 355 (1391)
T KOG0065|consen 276 VGPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFED 355 (1391)
T ss_pred ecCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHh
Confidence 99999999999999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccccCcc
Q 000860 241 LGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALATTKYA 320 (1250)
Q Consensus 241 lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1250)
+||.||++++++|+++++++.+++.++|.....+....+++++.+.+.+++.+.++..+.+.+.++.+.++.+...+++.
T Consensus 356 ~Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~ 435 (1391)
T KOG0065|consen 356 MGFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYS 435 (1391)
T ss_pred cCccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCcee
Confidence 99999999999999999999888888888877777778889999999999999999999999988888888888889999
Q ss_pred ccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHhhhHHH
Q 000860 321 VSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCFSELPI 400 (1250)
Q Consensus 321 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 400 (1250)
.+.|.|++.|+.|.+.+..||..++....++.+++++++|++|++... .+..+...+.+++||++++.+++++.+++.
T Consensus 436 v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~ 513 (1391)
T KOG0065|consen 436 VPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIAL 513 (1391)
T ss_pred ccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999999999998773 445677888999999999999999999999
Q ss_pred hhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000860 401 LISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLYRMMA 480 (1250)
Q Consensus 401 ~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~~~i~ 480 (1250)
.+.++|+++|||+..+|++|++.++.++.++|..++..++|.+|.||++|+.+++++||++++++++...++.+++++++
T Consensus 514 ~~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia 593 (1391)
T KOG0065|consen 514 TFQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIA 593 (1391)
T ss_pred HHhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCcccccc------------CC
Q 000860 481 SIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKK------------SA 548 (1250)
Q Consensus 481 ~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~------------~~ 548 (1250)
++++++.+|+.++++..+.+.+++||+||...|++||+|++|++|+.|++++++.|||.+.+|.|. ..
T Consensus 594 ~l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~ 673 (1391)
T KOG0065|consen 594 SLSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENK 673 (1391)
T ss_pred HhcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986 11
Q ss_pred C---ccccccchhccccccC-----CCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhcccc
Q 000860 549 I---GNNTVGYNVLHSHSLP-----TDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGV 620 (1250)
Q Consensus 549 ~---~~~~~g~~~l~~~~~~-----~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1250)
. ...+.|..++...++. ....|+|++++++++|.++|..+..+++.+.++....+......+...+.....
T Consensus 674 ~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~- 752 (1391)
T KOG0065|consen 674 VCAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS- 752 (1391)
T ss_pred cchhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh-
Confidence 1 1345678888777665 677899999999999999999999999999998877665543322221110000
Q ss_pred ccccccccccCCcccCCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCc
Q 000860 621 ASQGCELKTTSSREDGKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAG 700 (1250)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsG 700 (1250)
.......+...+....+.+++..|..+..++++||.+..+.+-..+.+| +++++|+|||+.++||.++||||+||||
T Consensus 753 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAG 829 (1391)
T KOG0065|consen 753 AGSSSEIEKLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAG 829 (1391)
T ss_pred ccccccccccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCc
Confidence 0000000000011111233455555566777788777776665444443 5678999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 000860 701 KTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEV 780 (1250)
Q Consensus 701 KSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~ 780 (1250)
||||||+|+||.+.|.++|+|.+||.|.++..++|.+|||.|+|.|.|.+||||.|.|+|.||+|.+++.+++.+.|+++
T Consensus 830 KTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~V 909 (1391)
T KOG0065|consen 830 KTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEV 909 (1391)
T ss_pred hHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEec
Q 000860 781 MSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIH 859 (1250)
Q Consensus 781 l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p-~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 859 (1250)
++.++|++++|.+||.++ .|||.+||||++||.+|+.|| .||||||||||||+.++..|++.+|+++++|+||+||+|
T Consensus 910 i~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIH 988 (1391)
T KOG0065|consen 910 IELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIH 988 (1391)
T ss_pred HHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 999999999999999999 899999999999999999999 899999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhhCCCCCCCCCCCCccchhhhhcCchhhhhhhhhHHHHHhc
Q 000860 860 QPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDGIPLIPSGYNPATWVLEVTTTAVEEKLGVDFANVYKN 939 (1250)
Q Consensus 860 ~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~~~~~p~~~npad~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1250)
|||.++++.||++++|++||+++|.||.+.+++.+++||+++||. +||+..|||||++|+++...+.+.+.||++.|++
T Consensus 989 QPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~ 1067 (1391)
T KOG0065|consen 989 QPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDENPAEWMLEVIGAGAEASLSVDFAEIWKN 1067 (1391)
T ss_pred CCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCChHHHHHhhcccccccccCccHHHHHhc
Confidence 999999999999999999999999999999999999999999875 7999999999999999988777778899999999
Q ss_pred cHHHHHHHHHhhhcCCCCCC-CCCCccCcccCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCC
Q 000860 940 SEQYREVESSIKSLSVPPDD-SEPLKFASTYSQNWLSQFFICLWKQNLVYWRSPQYNAVRLAFTTVAALILGSVFWDVGS 1018 (1250)
Q Consensus 940 s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~ 1018 (1250)
|++++++++++++++.+.++ ..+...+++|+.|+|.|++.++||++..+||+|.++++|++..++.||++|+.||++++
T Consensus 1068 S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~ 1147 (1391)
T KOG0065|consen 1068 SEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH 1147 (1391)
T ss_pred cHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC
Confidence 99999999999999887777 56666777899999999999999999999999999999999999999999999999984
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 000860 1019 QRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVSIERTVFYREKAAGMYSPIPFAAAQGLVEIPYVFVQTLLFGVITYF 1098 (1250)
Q Consensus 1019 ~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~y~ 1098 (1250)
+.+++++.+|++|+++++.+.++.....+.+..||.+++||+.+|+||+.||++|++++|+|+.++++++|.+++|+
T Consensus 1148 ---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~ 1224 (1391)
T KOG0065|consen 1148 ---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYY 1224 (1391)
T ss_pred ---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeee
Confidence 68999999999999999888877666777788899999999999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHhHhhCHHH
Q 000860 1099 MVNFERTMRKFLLYLVFTFLTFSYFTFFGMMVVGLTPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWFYYISPVA 1178 (1250)
Q Consensus 1099 ~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~ 1178 (1250)
|+|+.+++.+|++|++.++++.++.+.+|+++.+++||.++|+.+.++++.++.+|||+++|++.||.||+|+||+||+.
T Consensus 1225 ~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~t 1304 (1391)
T KOG0065|consen 1225 PIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVT 1304 (1391)
T ss_pred eccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCccccccCC-------CCCCHHHHHHhhcC----CCCCchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000860 1179 WTLRGIISSQLGDVETMIVEPT-------FRGTVKEYLKESLG----YGPGMVGASAAMLVAFSVFFFGIFAFSVKFLNF 1247 (1250)
Q Consensus 1179 y~~~~l~~ne~~~~~~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 1247 (1250)
|.+++++..+++|.+..|...+ ...++++|+...+| +.++..-....+..++.+++.+++.+.++|.++
T Consensus 1305 y~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~ 1384 (1391)
T KOG0065|consen 1305 YTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNF 1384 (1391)
T ss_pred HHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHH
Confidence 9999999999999987774322 12479999999999 776666666667778899999999999999999
Q ss_pred ccC
Q 000860 1248 QRR 1250 (1250)
Q Consensus 1248 ~~~ 1250 (1250)
+||
T Consensus 1385 wrn 1387 (1391)
T KOG0065|consen 1385 WRN 1387 (1391)
T ss_pred HHh
Confidence 986
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.2e-190 Score=1860.48 Aligned_cols=1249 Identities=59% Similarity=1.027 Sum_probs=1080.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||||+|+|+++|+...+|+|.+||+++++...++.++||+|+|.+++++||+|||.|++++++....
T Consensus 193 ~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~ 272 (1470)
T PLN03140 193 MTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTR 272 (1470)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999875557999999999987655577899999999999999999999999988754321
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
. +...+..+.+++....+.+++|.++++....+.+.+..++.+|+.+||++++||.||++..++|||||||||+||++|
T Consensus 273 ~-~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL 351 (1470)
T PLN03140 273 Y-DLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMI 351 (1470)
T ss_pred c-cchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhh
Confidence 1 111122233333333444556666666555555555668899999999999999999999999999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHHHHh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEFFES 240 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~f~~ 240 (1250)
+++|+++||||||+|||+.++.++++.|+++++..|+|+|+++|||+++++++||+|++|++|+++|+|+.+++.+||++
T Consensus 352 ~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~ 431 (1470)
T PLN03140 352 VGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFES 431 (1470)
T ss_pred cCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999998767899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccccCcc
Q 000860 241 LGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALATTKYA 320 (1250)
Q Consensus 241 lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1250)
+||.||++.+++||++++.++.+++++|.....|....+++++++.|+++..+++...+++.+.++...++.....+++.
T Consensus 432 lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 511 (1470)
T PLN03140 432 CGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYS 511 (1470)
T ss_pred cCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCc
Confidence 99999999999999999998776656554443444445788999999998887776665555444333333333345678
Q ss_pred ccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHhhhHHH
Q 000860 321 VSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCFSELPI 400 (1250)
Q Consensus 321 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 400 (1250)
.+++.|++.+++|.++..+||+..+..+.++.+++|+++|++|++++.+.....+...+.|.+||.++..+++++.+++.
T Consensus 512 ~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~ 591 (1470)
T PLN03140 512 VPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELAL 591 (1470)
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999886554434456677889999988888999999999
Q ss_pred hhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000860 401 LISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLYRMMA 480 (1250)
Q Consensus 401 ~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~~~i~ 480 (1250)
++.++++|+|||..++|++|+|+++++++++|+.++.+++|++|+|||+|+.+++.+||.+++++++...++.+++++++
T Consensus 592 ~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~ 671 (1470)
T PLN03140 592 MIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIA 671 (1470)
T ss_pred HHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCcccccc-CCCccccccchhc
Q 000860 481 SIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKK-SAIGNNTVGYNVL 559 (1250)
Q Consensus 481 ~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~-~~~~~~~~g~~~l 559 (1250)
++++++.+|+.+++++.+++++++||+++...||+||+|++|+||+.|++++++.|||.+..|... +.......|..+|
T Consensus 672 a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L 751 (1470)
T PLN03140 672 SVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL 751 (1470)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987766432 1222456899999
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhc--c-----cccc-cc---cc--
Q 000860 560 HSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVK--K-----GVAS-QG---CE-- 626 (1250)
Q Consensus 560 ~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~-~~---~~-- 626 (1250)
..+++...+.|+|.++++++++.++|.++.++++.+.++................... . .... .. ..
T Consensus 752 ~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (1470)
T PLN03140 752 NIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQ 831 (1470)
T ss_pred HhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccccccccccc
Confidence 9999988888999999999999999999999999988754443322211110000000 0 0000 00 00
Q ss_pred --c-c------ccCC----cccCCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEE
Q 000860 627 --L-K------TTSS----REDGKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTAL 693 (1250)
Q Consensus 627 --~-~------~~~~----~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i 693 (1250)
. . ...+ .......++..|..+..++|+||+|.++.+...+..+...+++++|+|||++++|||++||
T Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL 911 (1470)
T PLN03140 832 RMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTAL 911 (1470)
T ss_pred ccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEE
Confidence 0 0 0000 0001122334466677899999999997665433333333456899999999999999999
Q ss_pred EcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHH
Q 000860 694 VGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQR 773 (1250)
Q Consensus 694 ~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~ 773 (1250)
|||||||||||||+|+|+.+++..+|+|.+||.+.....+++.+|||+|+|.++|.+||+|++.|++.++.|...+++++
T Consensus 912 ~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~ 991 (1470)
T PLN03140 912 MGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEK 991 (1470)
T ss_pred ECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHH
Confidence 99999999999999999977667889999999987655567789999999999999999999999998887766666777
Q ss_pred HHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCE
Q 000860 774 HEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRT 853 (1250)
Q Consensus 774 ~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~t 853 (1250)
.++++++++.++|.+++|+.+|.++.++|||||||||+||++|+.+|+||||||||||||+.++..+++.|++++++|+|
T Consensus 992 ~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~t 1071 (1470)
T PLN03140 992 MMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1071 (1470)
T ss_pred HHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 78899999999999999999998887899999999999999999999999999999999999999999999999988999
Q ss_pred EEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhhCCCCCCCCCCCCccchhhhhcCchhhhhhhhhH
Q 000860 854 VVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDGIPLIPSGYNPATWVLEVTTTAVEEKLGVDF 933 (1250)
Q Consensus 854 vi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~~~~~p~~~npad~~~~~~~~~~~~~~~~~~ 933 (1250)
||+++|||+.++++.||++++|++||+++|.|+.+.+++++++||+++||.++||+++|||||++|+++.+.+.+...||
T Consensus 1072 VI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~ 1151 (1470)
T PLN03140 1072 VVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDF 1151 (1470)
T ss_pred EEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchH
Confidence 99999999977899999999998889999999998877899999999977667999999999999999876554555689
Q ss_pred HHHHhccHHHHHHHHHhhhcCCCCCCCCCCccCcccCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHh
Q 000860 934 ANVYKNSEQYREVESSIKSLSVPPDDSEPLKFASTYSQNWLSQFFICLWKQNLVYWRSPQYNAVRLAFTTVAALILGSVF 1013 (1250)
Q Consensus 934 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f 1013 (1250)
++.|++|++++++.+.++++..+.+..++....++++.++|+|+++|++|+++++||||.++.+|+++++++|+++|++|
T Consensus 1152 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f 1231 (1470)
T PLN03140 1152 AEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIF 1231 (1470)
T ss_pred HHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998887777666554444333334567889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 000860 1014 WDVGSQRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVSIERTVFYREKAAGMYSPIPFAAAQGLVEIPYVFVQTLLFG 1093 (1250)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~ 1093 (1250)
|+++++..+.++++++.|++|++++++++.++++++|.+..||++|+||+++|+|++++|++|++++|+|+.++.+++|.
T Consensus 1232 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~ 1311 (1470)
T PLN03140 1232 WKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYT 1311 (1470)
T ss_pred hCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998766778999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHhHh
Q 000860 1094 VITYFMVNFERTMRKFLLYLVFTFLTFSYFTFFGMMVVGLTPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWFYY 1173 (1250)
Q Consensus 1094 ~i~y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~ 1173 (1250)
+|+|||+||+++++.||+|+++++++.++++++|+++++++||.++|..++++++.++++|+||++|+++||+||+|++|
T Consensus 1312 ~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~ 1391 (1470)
T PLN03140 1312 LIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYW 1391 (1470)
T ss_pred HHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCHHHHHHHHHHHHhhCCCccccccCCC--CCCHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000860 1174 ISPVAWTLRGIISSQLGDVETMIVEPTF--RGTVKEYLKESLGYGPGMVGASAAMLVAFSVFFFGIFAFSVKFLNFQRR 1250 (1250)
Q Consensus 1174 isp~~y~~~~l~~ne~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 1250 (1250)
+||++|+++|++.|||+|.+..|.+||. ..++.+|+++.|||++++.|++++++++|+++|+++++++++++|||||
T Consensus 1392 isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1392 ICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred cCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999998877766662 2468899999999999999999999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.6e-169 Score=1675.31 Aligned_cols=1198 Identities=32% Similarity=0.543 Sum_probs=986.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGN-LNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~-~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||||+|+|+.++. .+.+|+|.+||.++++. ..++.++||+|+|.+++++||+|||.|+++++..
T Consensus 89 ~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~ 168 (1394)
T TIGR00956 89 LTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTP 168 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCC
Confidence 58999999999999999999997432 24699999999987532 2456799999999999999999999999876532
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
.... ....+.+.. +..++.+++.+||++++||.||++.+++|||||||||+||
T Consensus 169 ~~~~----~~~~~~~~~-----------------------~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA 221 (1394)
T TIGR00956 169 QNRP----DGVSREEYA-----------------------KHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIA 221 (1394)
T ss_pred CCCC----CCCCHHHHH-----------------------HHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHH
Confidence 1100 000000000 0124668999999999999999999999999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEF 237 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~ 237 (1250)
++|+++|+|++|||||+|||+.++.++++.|++++++.|+|+|+++||+++++.++||+|++|++|+++++|+++++.+|
T Consensus 222 ~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~y 301 (1394)
T TIGR00956 222 EASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQY 301 (1394)
T ss_pred HHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHH
Confidence 99999999999999999999999999999999998766899999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCC----------
Q 000860 238 FESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKS---------- 307 (1250)
Q Consensus 238 f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~---------- 307 (1250)
|+++||.||++.+++||+.++.++.++.. ..... .....+.+++++.|+++..+++...+.+.+.++.
T Consensus 302 F~~lG~~~p~~~n~aDfl~~~~~~~~~~~-~~~~e-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1394)
T TIGR00956 302 FEKMGFKCPDRQTTADFLTSLTSPAERQI-KPGYE-KKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYR 379 (1394)
T ss_pred HHHcCCCCCCCCChHHHHHhccChhhhhc-ccccc-ccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHH
Confidence 99999999999999999999987654221 11101 1122457788888988877665544332211110
Q ss_pred -----CCCCCcccccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHH
Q 000860 308 -----KSHPSALATTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNC 382 (1250)
Q Consensus 308 -----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~ 382 (1250)
...+.....+.+..++++|++.+++|.++..+||+..+..++++.+++|+++|++|++.+.+. .+.+.+.|+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~~~~r~g~ 456 (1394)
T TIGR00956 380 ESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SDFYSRGGA 456 (1394)
T ss_pred HHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHH
Confidence 000011122356788999999999999999999999999999999999999999999876433 456778999
Q ss_pred HHHHHHHHHHHHhhhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHH
Q 000860 383 HFFGMVHMMFNCFSELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYM 462 (1250)
Q Consensus 383 ~f~~~~~~~~~~~~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~ 462 (1250)
+|+.+.+..+.++.+++.++.+|++++||+..++|++++|++|++++++|+.++.+++|++|+|||+|+.+++.+|+.++
T Consensus 457 lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~ 536 (1394)
T TIGR00956 457 LFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYL 536 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHH
Confidence 99999998888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCcc
Q 000860 463 LLLFSIHQMALGLYRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATR 542 (1250)
Q Consensus 463 ~~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~ 542 (1250)
+++++...++.++++++++++++..+|+.+++++.+++++++||+++...+|.||+|++|+||++|++++++.|||.+..
T Consensus 537 l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~ 616 (1394)
T TIGR00956 537 LILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRR 616 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccccC--CC----------------------ccccccchhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000860 543 WMKKS--AI----------------------GNNTVGYNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNP 598 (1250)
Q Consensus 543 ~~~~~--~~----------------------~~~~~g~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~ 598 (1250)
+.|.. +. .....|.++|.. .+.....+.|.++++++++.++|..+..+++.+.++
T Consensus 617 ~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 617 FECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77641 00 012356677764 344455689999999999999999999999998774
Q ss_pred CcCccccccccc----cchh--------hhccccccccccccccCCcccCCCCC-cccCCCCeeEEEEeEEEEEeCCccc
Q 000860 599 LRKSQVVIQSDD----REEN--------SVKKGVASQGCELKTTSSREDGKKKG-MIMPFHPLTMTFHNISYYVDTPQAM 665 (1250)
Q Consensus 599 ~~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~ 665 (1250)
............ ...+ ....+........+...+.+...... .........++|+|++++++.+
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~~~~~--- 772 (1394)
T TIGR00956 696 AKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYEVKIK--- 772 (1394)
T ss_pred cCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEEecCC---
Confidence 333211100000 0000 00000000000000000000000000 0000112358999999987532
Q ss_pred ccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCccCCcccccceEEEEcCCC
Q 000860 666 RSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARISGYVEQED 744 (1250)
Q Consensus 666 ~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~yv~q~~ 744 (1250)
++++.+|+|||++++|||++||+||||||||||||+|+|+.+++ +.+|+|.+||.+... .+++.+|||+|+|
T Consensus 773 ------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~ 845 (1394)
T TIGR00956 773 ------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQD 845 (1394)
T ss_pred ------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccc
Confidence 13467999999999999999999999999999999999987643 456999999998753 4678899999999
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCc-EE
Q 000860 745 VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPS-II 823 (1250)
Q Consensus 745 ~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~-il 823 (1250)
.+++.+||+|++.|++.++.|...++++++++++++++.++|.+++|+.+|+++. +||||||||++||++|+.+|+ ||
T Consensus 846 ~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~~~P~~iL 924 (1394)
T TIGR00956 846 LHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELVAKPKLLL 924 (1394)
T ss_pred cCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHHcCCCeEE
Confidence 9999999999999999988776667777788999999999999999999986543 799999999999999999997 99
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhhCCC
Q 000860 824 FMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDG 903 (1250)
Q Consensus 824 ~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~ 903 (1250)
+|||||||||+.++..+++.|++++++|+|||+++|||+..+++.||++++|++||+++|.|+.+..++++++||+++|
T Consensus 925 lLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~yf~~~G- 1003 (1394)
T TIGR00956 925 FLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIINYFEKHG- 1003 (1394)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHHHHHhcC-
Confidence 9999999999999999999999998889999999999997778899999999987799999999887789999999985
Q ss_pred CCCCCCCCCccchhhhhcCchhhhhhhhhHHHHHhccHHHHHHHHHhhhcCCCCCCC---CCCccCcccCCCHHHHHHHH
Q 000860 904 IPLIPSGYNPATWVLEVTTTAVEEKLGVDFANVYKNSEQYREVESSIKSLSVPPDDS---EPLKFASTYSQNWLSQFFIC 980 (1250)
Q Consensus 904 ~~~~p~~~npad~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~l 980 (1250)
.++||+++|||||++|+++...+.+...++.+.|++|.++++..+.+++...+.... .......+++.++|+|+++|
T Consensus 1004 ~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l 1083 (1394)
T TIGR00956 1004 APKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLV 1083 (1394)
T ss_pred CCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCHHHHHHHH
Confidence 358999999999999999865443334689999999988877665554432221111 11112246889999999999
Q ss_pred HHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHH-
Q 000860 981 LWKQNLVYWRSPQYNAVRLAFTTVAALILGSVFWDVGSQRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVSIERTVF- 1059 (1250)
Q Consensus 981 ~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~- 1059 (1250)
++|+++++||||.++.+|+++++++|+++|++||++++ +++++++|+|++|+.+++.++. +...+|.|+.||.+|
T Consensus 1084 ~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f~~~r~~~~ 1159 (1394)
T TIGR00956 1084 LWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQYLPPFVAQRDLYE 1159 (1394)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999986 4789999999999988877766 345567788888886
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHH-------HHHHHHHHHHHHHHHHHHHHHHhh
Q 000860 1060 YREKAAGMYSPIPFAAAQGLVEIPYVFVQTLLFGVITYFMVNFERTMRK-------FLLYLVFTFLTFSYFTFFGMMVVG 1132 (1250)
Q Consensus 1060 ~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~y~~~gl~~~~~~-------f~~~~~~~~~~~~~~~~~~~~~~~ 1132 (1250)
+||+.+|+|++.+|++|++++|+|+.++.+++|.+|+|||+||++++.. |++|++++++..++++++|+++++
T Consensus 1160 ~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~ 1239 (1394)
T TIGR00956 1160 VRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVIS 1239 (1394)
T ss_pred HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999987765 999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHhHhhCHHHHHHHHHHHHhhCCCcccccc--------------
Q 000860 1133 LTPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWFYYISPVAWTLRGIISSQLGDVETMIVE-------------- 1198 (1250)
Q Consensus 1133 ~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~-------------- 1198 (1250)
++|+..+|+.++++++.++++|+||++++++||.||+|++|+||++|+++|++.|||++.+..|..
T Consensus 1240 ~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC 1319 (1394)
T TIGR00956 1240 FNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTFNPPSGQTC 1319 (1394)
T ss_pred HCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccceecCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999998765521
Q ss_pred -----------------CCCC--------CCHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000860 1199 -----------------PTFR--------GTVKEYLKESLGYGPGMVGASAAMLVAFSVFFFGIFAFSVKFLNFQR 1249 (1250)
Q Consensus 1199 -----------------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 1249 (1250)
|+.. .++.+| ++.+|++.++.|+|++++++|++++ +++++++.+..+.+
T Consensus 1320 ~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~-l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~~r~~ 1393 (1394)
T TIGR00956 1320 GEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDF-LEPISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWLARVP 1393 (1394)
T ss_pred HHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHH-HHHcCCcccccccchhhhhHHHHHH-HHHHHhhheEEEcC
Confidence 1100 134444 4578999999999999999999888 88888888865544
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-99 Score=928.21 Aligned_cols=581 Identities=32% Similarity=0.581 Sum_probs=506.7
Q ss_pred CeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECC
Q 000860 647 PLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISG 725 (1250)
Q Consensus 647 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g 725 (1250)
+..+.|+|+++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|.+||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 457899999987754321 3578999999999999999999999999999999999998764 6899999999
Q ss_pred ccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 726 YPKEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 726 ~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
++...+.+++.+|||+|||.++|++||+|++.|+|++|+|.+.++++++++|+++++++||.+++|+++|+.+.||+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88877889999999999999999999999999999999999889999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||||+||.+|++||+||+|||||||||+.++.++++.|+++|++|+|||+|+|||+.+++++||++++|++ |+++|.|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996 7999999
Q ss_pred CCCccchhHHHHhhhCCCCCCCCCCCCccchhhhhcCch-hhhhh--h---hhHHHHHhccHHHHHHHHHhhhcCCCCCC
Q 000860 886 KLGVHSQIMIDYFQGLDGIPLIPSGYNPATWVLEVTTTA-VEEKL--G---VDFANVYKNSEQYREVESSIKSLSVPPDD 959 (1250)
Q Consensus 886 ~~~~~~~~~~~yf~~~~~~~~~p~~~npad~~~~~~~~~-~~~~~--~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 959 (1250)
++ +++.+||+++| ++||++.|||||++|+++.+ ..++. . ......++..+...+... ........
T Consensus 254 ~~----~~~~~ff~~~G--~~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 324 (613)
T KOG0061|consen 254 SP----RELLEFFSSLG--FPCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLE---ALEKSLST 324 (613)
T ss_pred CH----HHHHHHHHhCC--CCCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHH---HHhhhccc
Confidence 98 78999999997 57999999999999999842 11100 0 001111110110111100 00000000
Q ss_pred CCCCccCcccCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCChhhHHHHHHHHHHHHHH
Q 000860 960 SEPLKFASTYSQNWLSQFFICLWKQNLVYWRSPQYNAVRLAFTTVAALILGSVFWDVGSQRDSSQSLFMVMGALYASCLF 1039 (1250)
Q Consensus 960 ~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~ 1039 (1250)
..+ .+.....+||.|++.|++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.+.+
T Consensus 325 ~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~~~ 399 (613)
T KOG0061|consen 325 SKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFILSF 399 (613)
T ss_pred ccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHHHH
Confidence 000 111127899999999999999999999999999999999999999999999975 456777999999999999
Q ss_pred HHHHHHhhhhhHHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHH
Q 000860 1040 LGVNNAASVQPIVSIERTVFYREKAAGMYSPIPFAAAQGLVEIPYVFVQTLLFGVITYFMVNFERTMRKFLLYLVFTFLT 1119 (1250)
Q Consensus 1040 ~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~y~~~gl~~~~~~f~~~~~~~~~~ 1119 (1250)
..+.++.+.++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|++|+|||+|++++..+|++|++++++.
T Consensus 400 ~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~ 479 (613)
T KOG0061|consen 400 MTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLS 479 (613)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 98888888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHhHhhCHHHHHHHHHHHHhhCCCccccccC
Q 000860 1120 FSYFTFFGMMVVGLTPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWFYYISPVAWTLRGIISSQLGDVETMIVEP 1199 (1250)
Q Consensus 1120 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~~ 1199 (1250)
.++++++|+++++..||...|..+++++++.+++|+||+++.++||+||+|++|+|+++|++|+++.|||.+....|...
T Consensus 480 ~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~ 559 (613)
T KOG0061|consen 480 SLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLS 559 (613)
T ss_pred HHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999722333211
Q ss_pred --CCCCCHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000860 1200 --TFRGTVKEYLKESLGYGPGMVGASAAMLVAFSVFFFGIFAFSVKFLNFQRR 1250 (1250)
Q Consensus 1200 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 1250 (1250)
......++.++...++++.+.|.|+.+++++.++|++++|++|++..+.+|
T Consensus 560 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~~ 612 (613)
T KOG0061|consen 560 GNLCCESTGEDVLKQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRKR 612 (613)
T ss_pred cCCcccccHHHHHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 122233455667889999999999999999999999999999999776654
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.6e-97 Score=916.29 Aligned_cols=584 Identities=25% Similarity=0.424 Sum_probs=485.8
Q ss_pred CCeeEEEEeEEEEEeCCccc----------------ccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHh
Q 000860 646 HPLTMTFHNISYYVDTPQAM----------------RSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLA 709 (1250)
Q Consensus 646 ~~~~l~~~~l~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~ 709 (1250)
.++.++|.|++|+....... ++.....+++++|+|+|+++++||++||+||||||||||||+|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 35689999999987543200 00011123567999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000860 710 GRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL 789 (1250)
Q Consensus 710 g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~ 789 (1250)
|+.+++..+|+|.+||.+... ..++.+|||+|++.+++.+||+||+.|++.++.+...++++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~-~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTK-QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECch-hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 987654468999999998653 3446689999999999999999999999888766555666777889999999999999
Q ss_pred ccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhh
Q 000860 790 RHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAF 869 (1250)
Q Consensus 790 ~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 869 (1250)
+|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999988788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred cceeeeecCcEEEEeCCCCccchhHHHHhhhCCCCCCCCCCCCccchhhhhcCchhhh------h---hhhhHHHHHhcc
Q 000860 870 DELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDGIPLIPSGYNPATWVLEVTTTAVEE------K---LGVDFANVYKNS 940 (1250)
Q Consensus 870 d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~~~~~p~~~npad~~~~~~~~~~~~------~---~~~~~~~~~~~s 940 (1250)
|++++|++ |+++|.|+. +++.+||+++| ++||+++|||||++|+++.+.+. . ......+.|++.
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G--~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG--FSPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC--CCCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999997 78999999997 57999999999999998753210 0 012233445421
Q ss_pred HHHHHHHHHhhh--cCC-CCC-----CCCCCc-cCcccCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 000860 941 EQYREVESSIKS--LSV-PPD-----DSEPLK-FASTYSQNWLSQFFICLWKQNLVYWRSPQYNAVRLAFTTVAALILGS 1011 (1250)
Q Consensus 941 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~ 1011 (1250)
. .++..+..+. ... ... ..+... ....+.++||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 000000 11224578999999999999988 89999999999999999999999
Q ss_pred HhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000860 1012 VFWDVGSQRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVSIERTVFYREKAAGMYSPIPFAAAQGLVEIPYVFVQTLL 1091 (1250)
Q Consensus 1012 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~ 1091 (1250)
+||+++ ..++++|.|++||++++.++.++++.++.|+.||++|+||+.+|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999998888888888999999999999999999999999999999999999999999
Q ss_pred HHhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHh
Q 000860 1092 FGVITYFMVNFERTMRKFLLYLVFTFLTFSYFTFFGMMVVGLTPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWF 1171 (1250)
Q Consensus 1092 ~~~i~y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~ 1171 (1250)
|++|+|||+||++++++||+|++++++..++++++|+++++++||..+|+.+++++++++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred HhhCHHHHHHHHHHHHhhCCCcc-----ccccCC-CCCCHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000860 1172 YYISPVAWTLRGIISSQLGDVET-----MIVEPT-FRGTVKEYLKESLGYGPGMVGASAAMLVAFSVFFFGIFAFSVKFL 1245 (1250)
Q Consensus 1172 ~~isp~~y~~~~l~~ne~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 1245 (1250)
+|+||++|++|+++.|||++.+. .|..+. .......+ ....++++.+.|.++++|++++++|++++|++|++.
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKF-VEEDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCcc-chhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987542 342211 01111112 223344456789999999999999999999999987
Q ss_pred cc
Q 000860 1246 NF 1247 (1250)
Q Consensus 1246 ~~ 1247 (1250)
+|
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 75
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.9e-97 Score=917.69 Aligned_cols=568 Identities=30% Similarity=0.505 Sum_probs=501.5
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCccCCcccccceEEEEcCCCCCCCCCC
Q 000860 673 KKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVT 751 (1250)
Q Consensus 673 ~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~lt 751 (1250)
+++++|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987543 358999999998766667888999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000860 752 IEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPG-SFGLSTEQRKRLTIAVELVANPSIIFMDEPTS 830 (1250)
Q Consensus 752 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~-~~~lSgGerqr~~ia~~l~~~p~il~lDEPTs 830 (1250)
|+||+.|++.++.|...++++++++++++++.+||.+++|+.+|+++ .++||||||||++||++|+.+|++++|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999888777777888899999999999999999999864 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhhCCCCCCCCCC
Q 000860 831 GLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDGIPLIPSG 910 (1250)
Q Consensus 831 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~~~~~p~~ 910 (1250)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|.|+. +++.+||+++| ++||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g--~~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG--HPCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC--CCCCCC
Confidence 99999999999999999888999999999998889999999999985 899999997 68999999996 579999
Q ss_pred CCccchhhhhcCchhhh-----hhhhhHHHHHhccHHHHHHHHHhhhcCCCCC---CCCCCccCcccCCCHHHHHHHHHH
Q 000860 911 YNPATWVLEVTTTAVEE-----KLGVDFANVYKNSEQYREVESSIKSLSVPPD---DSEPLKFASTYSQNWLSQFFICLW 982 (1250)
Q Consensus 911 ~npad~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~ 982 (1250)
.|||||++|+++.+.+. +...++.+.|++++.+++..+.......+.+ ..........+..+|++|+++|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 99999999998754321 1123566777777666554433322111100 011111223567899999999999
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHH
Q 000860 983 KQNLVYWRSPQYNAVRLAFTTVAALILGSVFWDVGSQRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVSIERTVFYRE 1062 (1250)
Q Consensus 983 R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE 1062 (1250)
|++++.||||.++..|+++++++|+++|++||+++. +.++++++.|++|++++++++.++....+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999975 46789999999999999999988888888999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHH
Q 000860 1063 KAAGMYSPIPFAAAQGLVEIPYVFVQTLLFGVITYFMVNFERTMRKFLLYLVFTFLTFSYFTFFGMMVVGLTPNQHLAAI 1142 (1250)
Q Consensus 1063 ~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 1142 (1250)
+.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|++++++..++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCcchhhHHhHhhCHHHHHHHHHHHHhhCCCcc-ccccCCC---CCCHHHHHHhhcCCCCC
Q 000860 1143 ISSAFYSLSNLLSGFLVPQPSIPGWWIWFYYISPVAWTLRGIISSQLGDVET-MIVEPTF---RGTVKEYLKESLGYGPG 1218 (1250)
Q Consensus 1143 ~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~~l~~ne~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~ 1218 (1250)
+++++++++++|+||++++++||+||+|++|+||++|++|+++.|||.+.+. .|...+. +...++++++.||++.+
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~ 585 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcc
Confidence 9999999999999999999999999999999999999999999999998765 3421111 11124777889999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000860 1219 MVGASAAMLVAFSVFFFGIFAFSVKFLNFQRR 1250 (1250)
Q Consensus 1219 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 1250 (1250)
+.|++++++++++++|++++|++|++-.+.+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999777766
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.7e-94 Score=956.65 Aligned_cols=591 Identities=25% Similarity=0.429 Sum_probs=509.4
Q ss_pred CeeEEEEeEEEEEeCCcc--ccc-----------------ccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHH
Q 000860 647 PLTMTFHNISYYVDTPQA--MRS-----------------KGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDV 707 (1250)
Q Consensus 647 ~~~l~~~~l~~~~~~~~~--~~~-----------------~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~ 707 (1250)
.+.+.|+|++........ .++ .+.+++++++|+|||+.++|||+++|+||||||||||||+
T Consensus 27 ~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~ 106 (1394)
T TIGR00956 27 KLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKT 106 (1394)
T ss_pred eeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHH
Confidence 457899999876522111 000 0122345779999999999999999999999999999999
Q ss_pred HhCCCCC--CeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC----CCCHHHHHHH-HH
Q 000860 708 LAGRKTG--GYIEGDIKISGYPKEQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPK----EISKDQRHEF-VE 778 (1250)
Q Consensus 708 l~g~~~~--~~~~G~i~~~g~~~~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~----~~~~~~~~~~-v~ 778 (1250)
|+|+..+ .+.+|+|.+||.+... ..+++.++||+|+|.++|.+||+||+.|++.++.|. +.++++..++ ++
T Consensus 107 LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1394)
T TIGR00956 107 IASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHIAD 186 (1394)
T ss_pred HhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Confidence 9998532 2468999999987643 235667999999999999999999999999887653 2334444333 57
Q ss_pred HHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEE
Q 000860 779 EVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCT 857 (1250)
Q Consensus 779 ~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~ 857 (1250)
++++.+||.+++|+.+|+...++|||||||||+||++|+.+|+|++|||||+|||+.++..+++.|++++++ |+|||++
T Consensus 187 ~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~ 266 (1394)
T TIGR00956 187 VYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVA 266 (1394)
T ss_pred HHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 789999999999999999888999999999999999999999999999999999999999999999999874 9999999
Q ss_pred ecCCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhhCCCCCCCCCCCCccchhhhhcCchhhh----------
Q 000860 858 IHQPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDGIPLIPSGYNPATWVLEVTTTAVEE---------- 927 (1250)
Q Consensus 858 ~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~~~~~p~~~npad~~~~~~~~~~~~---------- 927 (1250)
+|||+.++++.||++++|++ |+++|+|+. +++.+||+++| ++||+++|||||++|+++++.+.
T Consensus 267 ~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG--~~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~ 339 (1394)
T TIGR00956 267 IYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG--FKCPDRQTTADFLTSLTSPAERQIKPGYEKKVP 339 (1394)
T ss_pred ecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC--CCCCCCCChHHHHHhccChhhhhccccccccCC
Confidence 99998889999999999985 799999997 78999999997 58999999999999998864311
Q ss_pred hhhhhHHHHHhccHHHHHHHHHhhhcCCC--C-------------CCCCCCccCcccCCCHHHHHHHHHHHHHHHHhcCh
Q 000860 928 KLGVDFANVYKNSEQYREVESSIKSLSVP--P-------------DDSEPLKFASTYSQNWLSQFFICLWKQNLVYWRSP 992 (1250)
Q Consensus 928 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~ 992 (1250)
....++++.|++|+.+++..+.+++.... . ..++.....+.+..|+|+|+++|++|++++.||||
T Consensus 340 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~ 419 (1394)
T TIGR00956 340 RTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNP 419 (1394)
T ss_pred CCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCH
Confidence 12367999999999887766554432111 0 00111122346788999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHhcCCCCChHH
Q 000860 993 QYNAVRLAFTTVAALILGSVFWDVGSQRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVSIERTVFYREKAAGMYSPIP 1072 (1250)
Q Consensus 993 ~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~ 1072 (1250)
.++.+|+++++++|+++|++||+++. +++++++|.|++||++++.++.++.++. .+..||+||+||+.+++|++++
T Consensus 420 ~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i~-~~~~eR~i~~re~~~~~Y~~~a 495 (1394)
T TIGR00956 420 SFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEIA-SMYEARPIVEKHRKYALYHPSA 495 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCcceeeeccccccCHHH
Confidence 99999999999999999999999985 4678999999999999999999877764 4567999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Q 000860 1073 FAAAQGLVEIPYVFVQTLLFGVITYFMVNFERTMRKFLLYLVFTFLTFSYFTFFGMMVVGLTPNQHLAAIISSAFYSLSN 1152 (1250)
Q Consensus 1073 y~~a~~~~~~p~~~~~~~~~~~i~y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 1152 (1250)
|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++||..+|+.++++++++++
T Consensus 496 y~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~ 575 (1394)
T TIGR00956 496 DAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALS 575 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCCcchhhHHhHhhCHHHHHHHHHHHHhhCCCcccccc------------------------CCCC-CCHHH
Q 000860 1153 LLSGFLVPQPSIPGWWIWFYYISPVAWTLRGIISSQLGDVETMIVE------------------------PTFR-GTVKE 1207 (1250)
Q Consensus 1153 l~~G~~i~~~~ip~~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~------------------------~~~~-~~~~~ 1207 (1250)
+|+||++|+++||+||+|++|+||++|+|||++.|||++..++|.. ||.. .++.+
T Consensus 576 lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~ 655 (1394)
T TIGR00956 576 IYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDD 655 (1394)
T ss_pred HHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHH
Confidence 9999999999999999999999999999999999999998776631 1111 25678
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000860 1208 YLKESLGYGPGMVGASAAMLVAFSVFFFGIFAFSVKFLNFQ 1248 (1250)
Q Consensus 1208 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 1248 (1250)
|+...||++++|.|+|++++++|+++|+++++++++|+++.
T Consensus 656 ~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~~ 696 (1394)
T TIGR00956 656 YLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKGA 696 (1394)
T ss_pred HHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 88888999999999999999999999999999999998743
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.4e-93 Score=943.56 Aligned_cols=567 Identities=24% Similarity=0.397 Sum_probs=488.4
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCccCCcccccceEEEEcCCCCCCCCCC
Q 000860 673 KKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVT 751 (1250)
Q Consensus 673 ~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~lt 751 (1250)
.++++|+|+|+.++|||+++|+||||||||||||+|+|+.++. ..+|+|.+||++..+...++.++||+|+|.|+|.+|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 4577999999999999999999999999999999999987542 358999999998755444678999999999999999
Q ss_pred HHHHHHHHHhcCCCC-------CCCHHHH------------------------HHHHHHHHHHcCCcccccccccCCCCC
Q 000860 752 IEESLWFSANLRLPK-------EISKDQR------------------------HEFVEEVMSLVELDSLRHALVGSPGSF 800 (1250)
Q Consensus 752 v~e~l~~~~~l~~~~-------~~~~~~~------------------------~~~v~~~l~~l~l~~~~~~~v~~~~~~ 800 (1250)
|+||+.|++.++.+. +.+.+++ +..++++++.+||++++|+.+|+...+
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 999999998876321 1111111 123678999999999999999998889
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
+|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .|+|||+++|||+.+++++||+|++|++ |
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G 414 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-G 414 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-c
Confidence 9999999999999999999999999999999999999999999999976 4899999999998899999999999985 8
Q ss_pred EEEEeCCCCccchhHHHHhhhCCCCCCCCCCCCccchhhhhcCchhhh------------hhhhhHHHHHhccHHHHHHH
Q 000860 880 RVIYGGKLGVHSQIMIDYFQGLDGIPLIPSGYNPATWVLEVTTTAVEE------------KLGVDFANVYKNSEQYREVE 947 (1250)
Q Consensus 880 ~~~~~g~~~~~~~~~~~yf~~~~~~~~~p~~~npad~~~~~~~~~~~~------------~~~~~~~~~~~~s~~~~~~~ 947 (1250)
+++|+||. +++.+||+++| ++||+++|||||++|+++..+.+ ....++++.|++|..+++..
T Consensus 415 ~ivy~G~~----~~~~~yF~~lG--f~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~ 488 (1470)
T PLN03140 415 QIVYQGPR----DHILEFFESCG--FKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLE 488 (1470)
T ss_pred eEEEeCCH----HHHHHHHHHcC--CCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHH
Confidence 99999997 78999999997 58999999999999999864321 12357889999998877665
Q ss_pred HHhhhcCCCCCCCCCCccCcccCCCHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCChhhHH
Q 000860 948 SSIKSLSVPPDDSEPLKFASTYSQNWLSQFFICLWKQNLVYWRSPQYNAVRLAFTTVAALILGSVFWDVGSQRDSSQSLF 1027 (1250)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~ 1027 (1250)
+.++........++.....++|..++|.|++.|++|+++..+||+.++..|+++.+++|+++|++||+++.+..+..+.+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~ 568 (1470)
T PLN03140 489 NELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGA 568 (1470)
T ss_pred HHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence 44332111101111111234688999999999999999999999999999999999999999999999976544445567
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHH
Q 000860 1028 MVMGALYASCLFLGVNNAASVQPIVSIERTVFYREKAAGMYSPIPFAAAQGLVEIPYVFVQTLLFGVITYFMVNFERTMR 1107 (1250)
Q Consensus 1028 ~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~y~~~gl~~~~~ 1107 (1250)
.+.|++||++++.++.++.++ +.++.||+||+|||.+++|++++|++|++++++|+.++.+++|++|+|||+||+++++
T Consensus 569 ~~~g~lff~~l~~~~~~~~~l-~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~ 647 (1470)
T PLN03140 569 LYIGALLFSMIINMFNGFAEL-ALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEAS 647 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchh
Confidence 788999999998888776654 6677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHhHhhCHHHHHHHHHHHH
Q 000860 1108 KFLLYLVFTFLTFSYFTFFGMMVVGLTPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWFYYISPVAWTLRGIISS 1187 (1250)
Q Consensus 1108 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~~l~~n 1187 (1250)
+||+|++++++..++++++++++++++|+..+|+.+++++++++++|+||++|+++||+||+|++|+||++|++||+++|
T Consensus 648 ~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~N 727 (1470)
T PLN03140 648 RFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVN 727 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCccc-cccCCCCCCHHHHHHhhcCCCCC--chhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000860 1188 QLGDVETM-IVEPTFRGTVKEYLKESLGYGPG--MVGASAAMLVAFSVFFFGIFAFSVKFLNF 1247 (1250)
Q Consensus 1188 e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 1247 (1250)
||.+..+. +.+.+.....++.+++.+|++.+ +.|+++++|++|+++|+++++++|+|+++
T Consensus 728 Ef~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 728 EMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred hccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99776543 22222223334445588999765 56999999999999999999999999874
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-88 Score=831.71 Aligned_cols=567 Identities=27% Similarity=0.473 Sum_probs=505.0
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCccCCcccccceEEEEcCCCCCCCCCC
Q 000860 673 KKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVT 751 (1250)
Q Consensus 673 ~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~lt 751 (1250)
.+..+|+|+|+.++|||++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|++|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999976532 235799999999776444788999999999999999
Q ss_pred HHHHHHHHHhcCCCCCC----CHHHHH-HHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000860 752 IEESLWFSANLRLPKEI----SKDQRH-EFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMD 826 (1250)
Q Consensus 752 v~e~l~~~~~l~~~~~~----~~~~~~-~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 826 (1250)
|+|+|.|+++++.|... ++.++. +..+.+++.+||++|+||+||+...||+||||||||++|.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 99999999999987432 222222 2678899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhhCCCCC
Q 000860 827 EPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQGLDGIP 905 (1250)
Q Consensus 827 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~~~~ 905 (1250)
|+|.|||+.|+.++++.||++++. +.|+++++|||+.+++++||+|++|.+ |+++|+||. .++++||+++| +
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G--f 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG--F 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC--c
Confidence 999999999999999999999875 889999999999999999999999996 899999998 68999999997 5
Q ss_pred CCCCCCCccchhhhhcCchhhh-----------hh-hhhHHHHHhccHHHHHHHHHhhhcCCCCCCCCCCccCcccCCCH
Q 000860 906 LIPSGYNPATWVLEVTTTAVEE-----------KL-GVDFANVYKNSEQYREVESSIKSLSVPPDDSEPLKFASTYSQNW 973 (1250)
Q Consensus 906 ~~p~~~npad~~~~~~~~~~~~-----------~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1250)
.||++.++|||+.++++...+. .. ..|+++.|.+|+.+++.....+........++.....+.|..++
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 8999999999999999832111 11 26899999999999887765544322222333344456899999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 000860 974 LSQFFICLWKQNLVYWRSPQYNAVRLAFTTVAALILGSVFWDVGSQRDSSQSLFMVMGALYASCLFLGVNNAASVQPIVS 1053 (1250)
Q Consensus 974 ~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1053 (1250)
|.|++.|++|.++.+.||..++..++++.+++|+++|++|++.+. .+..+.+.|.|++||++++.+++++.++.. ..
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~-~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIAL-TF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHH-HH
Confidence 999999999999999999999999999999999999999999973 466788999999999999999999888744 55
Q ss_pred hhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000860 1054 IERTVFYREKAAGMYSPIPFAAAQGLVEIPYVFVQTLLFGVITYFMVNFERTMRKFLLYLVFTFLTFSYFTFFGMMVVGL 1133 (1250)
Q Consensus 1054 ~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~y~~~gl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 1133 (1250)
+.||||+|||...+|++++|.++.++.++|+.++.+++|.+|+||++||.+++++||.|++++++...|+++++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhHHhHhhCHHHHHHHHHHHHhhCCCcccccc---------------
Q 000860 1134 TPNQHLAAIISSAFYSLSNLLSGFLVPQPSIPGWWIWFYYISPVAWTLRGIISSQLGDVETMIVE--------------- 1198 (1250)
Q Consensus 1134 ~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~isp~~y~~~~l~~ne~~~~~~~~~~--------------- 1198 (1250)
+++...|++++++.+++..+++||+||.++||+||+|++|+||+.|++|++++|||++.+.+|..
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998887751
Q ss_pred ------CCCC-CCHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000860 1199 ------PTFR-GTVKEYLKESLGYGPGMVGASAAMLVAFSVFFFGIFAFSVKFLNFQR 1249 (1250)
Q Consensus 1199 ------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 1249 (1250)
+|.. ..+.+|+...|++++.|.|+++||++||.++|.++..+++.|+++-+
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~ 733 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLK 733 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccc
Confidence 1111 13578888899999999999999999999999999999999998643
No 10
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-74 Score=710.04 Aligned_cols=218 Identities=29% Similarity=0.425 Sum_probs=185.5
Q ss_pred CeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCc
Q 000860 647 PLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 726 (1250)
Q Consensus 647 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~ 726 (1250)
...++++||+|.|+.+ ++.+||+|+|++|++|+.+||+|||||||||.+.+|-...+ +..|.|.+||.
T Consensus 985 ~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V~IDg~ 1052 (1228)
T KOG0055|consen 985 KGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKVKIDGV 1052 (1228)
T ss_pred eeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCc
Confidence 3479999999999864 46789999999999999999999999999999999997655 56899999999
Q ss_pred cCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH---HcCCcccccccccCCCCC
Q 000860 727 PKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMS---LVELDSLRHALVGSPGSF 800 (1250)
Q Consensus 727 ~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~---~l~l~~~~~~~v~~~~~~ 800 (1250)
+++. .++|+++|.|.|+|.|| +.|++||+.|+ . . +.+.++..+..+.+-. ..+|.+-.||.+|+.+.
T Consensus 1053 dik~lnl~~LR~~i~lVsQEP~LF-~~TIrENI~YG-~---~-~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~- 1125 (1228)
T KOG0055|consen 1053 DIKDLNLKWLRKQIGLVSQEPVLF-NGTIRENIAYG-S---E-EVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGV- 1125 (1228)
T ss_pred ccccCCHHHHHHhcceeccCchhh-cccHHHHHhcc-C---C-CCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccC-
Confidence 8765 56789999999999998 56999999998 1 1 2454444332221110 23678888999998665
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
+||||||||++||||+++||+||+|||+||+||+++++.+++.|++.. .|+|.|+++|+++ +.+.+|.|+|+++ |+
T Consensus 1126 QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TIqnaD~I~Vi~~-G~ 1201 (1228)
T KOG0055|consen 1126 QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TIQNADVIAVLKN-GK 1201 (1228)
T ss_pred cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hhhcCCEEEEEEC-CE
Confidence 699999999999999999999999999999999999999999999874 6999999999986 6789999999985 89
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
+++.|+-
T Consensus 1202 VvE~GtH 1208 (1228)
T KOG0055|consen 1202 VVEQGTH 1208 (1228)
T ss_pred EEecccH
Confidence 9999985
No 11
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-70 Score=672.81 Aligned_cols=548 Identities=30% Similarity=0.529 Sum_probs=454.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
++||+|||||||||||++|+|+.+++...+|+|++||++.+....++.+|||.|+|.+++++||+|++.|.+.++....
T Consensus 58 l~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~- 136 (613)
T KOG0061|consen 58 LLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS- 136 (613)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-
Confidence 5899999999999999999999987557899999999888777889999999999999999999999999999875432
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
+...+ .+++|+++++.|||.+|+||+||+...||+||||||||+||..|
T Consensus 137 -------~~~~~------------------------k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~El 185 (613)
T KOG0061|consen 137 -------LSKEE------------------------KRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALEL 185 (613)
T ss_pred -------CCHHH------------------------HHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHH
Confidence 11111 12358999999999999999999988899999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHHHHh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEFFES 240 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~f~~ 240 (1250)
+.||+||+|||||||||+.++.++++.|+++|++ |+|||++||||+.+++++||++++|++|+++|+|+++++.+||++
T Consensus 186 l~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~ 264 (613)
T KOG0061|consen 186 LTDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSS 264 (613)
T ss_pred HcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHh
Confidence 9999999999999999999999999999999987 999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccccCcc
Q 000860 241 LGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALATTKYA 320 (1250)
Q Consensus 241 lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1250)
+|++||++.||+|++.++.+..+........ .......+.++......+............. .......
T Consensus 265 ~G~~~P~~~Npadf~l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 333 (613)
T KOG0061|consen 265 LGFPCPELENPADFLLDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSLSTSK-----KVEIGTS 333 (613)
T ss_pred CCCCCCCcCChHHHHHHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhccccc-----ccccccC
Confidence 9999999999999999877642110000000 0000000000000000000000000000000 0001115
Q ss_pred ccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHH-hhhHH
Q 000860 321 VSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNC-FSELP 399 (1250)
Q Consensus 321 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~~~ 399 (1250)
.++|.|+..+.+|.++..+|++.....+.++.+.+++++|.+|++...+. .....+.+++|+.+....+.. +..++
T Consensus 334 ~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~g~~~~~~~~~~f~~~~~~i~ 410 (613)
T KOG0061|consen 334 PSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDA---KGIQNRLGLFFFILSFMTFLSMFGAVP 410 (613)
T ss_pred CcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCch---HHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 78999999999999999999999999999999999999999999874332 234467788888887775554 44688
Q ss_pred HhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000860 400 ILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLYRMM 479 (1250)
Q Consensus 400 ~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~~~i 479 (1250)
.+..+++++.||+..++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.+.++.++....+.+++.++
T Consensus 411 ~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i 490 (613)
T KOG0061|consen 411 VFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFI 490 (613)
T ss_pred HhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCC--Cccccccch
Q 000860 480 ASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSA--IGNNTVGYN 557 (1250)
Q Consensus 480 ~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~--~~~~~~g~~ 557 (1250)
+++.++...+..+++.+...+++++||+++...+|.||.|+.|+|+.+|++++++.|+|......|... ..+...+..
T Consensus 491 ~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~ 570 (613)
T KOG0061|consen 491 SAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGED 570 (613)
T ss_pred HHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHH
Confidence 999999999999999999999999999999999999999999999999999999999998622222221 234456667
Q ss_pred hccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000860 558 VLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLN 597 (1250)
Q Consensus 558 ~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~ 597 (1250)
++...++... ..|.++.+++.+.+.|.++.++++++..
T Consensus 571 ~l~~~~~~~~--~~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 571 VLKQLGFEDS--SFWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred HHHhcCCccc--ccchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 7776666543 4688999999999999999999887654
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.9e-70 Score=678.76 Aligned_cols=551 Identities=26% Similarity=0.437 Sum_probs=456.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++||+|||.|+++++.....
T Consensus 53 ~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 132 (617)
T TIGR00955 53 LLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRV 132 (617)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCC
Confidence 58999999999999999999998765446899999999887556678899999999999999999999999877532210
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCc-cccCccccchhhHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEM-LRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~-~~~LSGGqkqRv~iA~a 159 (1250)
...++ +.+++++++.+||.+++||.||+++ .++|||||||||+||++
T Consensus 133 --------~~~~~------------------------~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~a 180 (617)
T TIGR00955 133 --------TKKEK------------------------RERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASE 180 (617)
T ss_pred --------CHHHH------------------------HHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHH
Confidence 00010 1237889999999999999999864 67899999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHHHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEFFE 239 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~f~ 239 (1250)
|+.+|++++|||||||||+.++.++++.|+++++ .|+|+|+++||++.++.+.||++++|++|+++++|+++++.+||+
T Consensus 181 L~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~ 259 (617)
T TIGR00955 181 LLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFS 259 (617)
T ss_pred HHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999986 489999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCC---CCCCcccc
Q 000860 240 SLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSK---SHPSALAT 316 (1250)
Q Consensus 240 ~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~ 316 (1250)
++|++||++.+++|++.++.+....... ......++..+.+++++.+++............. ........
T Consensus 260 ~~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (617)
T TIGR00955 260 DLGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEG 332 (617)
T ss_pred HcCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccc
Confidence 9999999999999999887654321110 0001123344455544443333222111110000 00001112
Q ss_pred cCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHH-h
Q 000860 317 TKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNC-F 395 (1250)
Q Consensus 317 ~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~ 395 (1250)
.++..+++.|+..+++|.++..+|++.++..+.++.+++++++|.+|++.+.+ ..+...+.+++|+.+....+.. +
T Consensus 333 ~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~~g~lf~~~~~~~f~~~~ 409 (617)
T TIGR00955 333 IGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNINGALFLFLTNMTFQNVF 409 (617)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999976533 2355667788888877766654 4
Q ss_pred hhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHH
Q 000860 396 SELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGL 475 (1250)
Q Consensus 396 ~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l 475 (1250)
..++.+..++++++||+..++|++++|++++.+.++|..++.+++|.+++|||+|+.+++..|+.+++++++...++.++
T Consensus 410 ~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~ 489 (617)
T TIGR00955 410 PVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSF 489 (617)
T ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 66778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccc-cccCCC-c--c
Q 000860 476 YRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRW-MKKSAI-G--N 551 (1250)
Q Consensus 476 ~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~-~~~~~~-~--~ 551 (1250)
+.++++++++..+|..+++++.+++++++||+++...+|.||+|++|+||++|++++++.|||.+..+ .|.... . +
T Consensus 490 ~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c 569 (617)
T TIGR00955 490 GYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPC 569 (617)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988665 343211 1 2
Q ss_pred ccccchhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000860 552 NTVGYNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYL 596 (1250)
Q Consensus 552 ~~~g~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~ 596 (1250)
...|..+++.++++.. +.|.++++++++.++|.++.++++++.
T Consensus 570 ~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 570 PSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357888888887654 458999999999999999999988764
No 13
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2e-69 Score=669.98 Aligned_cols=548 Identities=23% Similarity=0.396 Sum_probs=434.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+|||||||||||++|+|+.+|+ ..+|+|.+||+++.. ..++.++||+|++.+++.+||+||+.|++.++.....
T Consensus 96 ~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~-~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~ 173 (659)
T PLN03211 96 ILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTK-QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL 173 (659)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECch-hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999998763 369999999998753 2345699999999999999999999998765421110
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
...+ .+++++++++.+||++++||.||+...++|||||||||+||++|
T Consensus 174 --------~~~~------------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL 221 (659)
T PLN03211 174 --------TKQE------------------------KILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEM 221 (659)
T ss_pred --------CHHH------------------------HHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHH
Confidence 0000 01236789999999999999999988899999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHHHHh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEFFES 240 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~f~~ 240 (1250)
+.+|+||+|||||+|||+.++.++++.|+++++ .|+|+|+++|++..++.+.+|++++|++|++++.|+++++.+||++
T Consensus 222 ~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~ 300 (659)
T PLN03211 222 LINPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFES 300 (659)
T ss_pred HhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999986 5899999999988889999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccC---CCCCCC-----CCCC
Q 000860 241 LGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAV---PFDKSK-----SHPS 312 (1250)
Q Consensus 241 lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~-----~~~~ 312 (1250)
+|++||++.||+||+.++.+.............+ ...+...+.|++.. ..+.....+. ...... ..+.
T Consensus 301 ~G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (659)
T PLN03211 301 VGFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKE 376 (659)
T ss_pred CCCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccc
Confidence 9999999999999999987643211000000000 01122223332211 0110000000 000000 0000
Q ss_pred c-ccccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHH
Q 000860 313 A-LATTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMM 391 (1250)
Q Consensus 313 ~-~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 391 (1250)
. .....+..++++|+..+++|.++. +|++.+...++++.+++|+++|++|++.+ ..+.+.+.|++||.+.+..
T Consensus 377 ~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~ 450 (659)
T PLN03211 377 HRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWG 450 (659)
T ss_pred cccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHH
Confidence 0 011123467999999999999888 78888888999999999999999999753 2356778899998877644
Q ss_pred -HHHhhhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHH
Q 000860 392 -FNCFSELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQ 470 (1250)
Q Consensus 392 -~~~~~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~ 470 (1250)
...+..++.+..++++++||+..++|++++|++|++++++|+.++.+++|++|+|||+|+.+++.+|+.+++++++...
T Consensus 451 ~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~ 530 (659)
T PLN03211 451 VFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVL 530 (659)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHH
Confidence 4667888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccc-----cc
Q 000860 471 MALGLYRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRW-----MK 545 (1250)
Q Consensus 471 ~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~-----~~ 545 (1250)
++.+++.+++++++++..|+.+++++..++++++||+++ .+|.||+|++|+||++|++++++.|||...+. .|
T Consensus 531 ~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C 608 (659)
T PLN03211 531 VSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGC 608 (659)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCC
Confidence 999999999999999999999999999999999999996 79999999999999999999999999976432 23
Q ss_pred cCCCccccccchhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000860 546 KSAIGNNTVGYNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLN 597 (1250)
Q Consensus 546 ~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~ 597 (1250)
....+.......++....+. ....|.++++++++.+++.++.++++++.+
T Consensus 609 ~~~~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 609 SLPHGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred CCcccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22111111111122222222 234788999999999999999998887543
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.3e-68 Score=696.57 Aligned_cols=224 Identities=25% Similarity=0.387 Sum_probs=195.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. +++.+|+|||+.|++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 5899999988742 13569999999999999999999999999999999999876 3589999999886
Q ss_pred Cc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
.. ...++.+|||||++.+++.+||+|++.+.+.++ +.++++.+++++++++.++|.+.+|+.++. |||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~---g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~-----LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLR---GVPAEEIEKVANWSIQSLGLSLYADRLAGT-----YSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHhcCChhh-----CCHHH
Confidence 42 234567999999999999999999999887765 234455567789999999999999988865 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||++||+||+.+|+|++|||||+|||+.+++.+++.|++++++|+|||+|+|+++ ++..+|||+++|.+ |+++..|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999985 68889999999985 89999998
Q ss_pred CCccchhHHHHhh
Q 000860 887 LGVHSQIMIDYFQ 899 (1250)
Q Consensus 887 ~~~~~~~~~~yf~ 899 (1250)
. +++..-|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 7 55655554
No 15
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-67 Score=660.82 Aligned_cols=738 Identities=20% Similarity=0.236 Sum_probs=393.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
++||+||.|||||+||.+|+|+++. .+|+|.++| .++||||+ +|+.+.||||||.||... +++
T Consensus 549 lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~-pWI~ngTvreNILFG~~~---d~~ 611 (1381)
T KOG0054|consen 549 LVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQ-PWIQNGTVRENILFGSPY---DEE 611 (1381)
T ss_pred EEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEeccc-cHhhCCcHHHhhhcCccc---cHH
Confidence 4799999999999999999999984 599999998 48999999 555678999999997542 122
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
+++...+.|.++++-+ -|+++..|.||++|+. |||||||||++|||+
T Consensus 612 rY~~Vi~aC~L~~Dle--------------------------------~Lp~GD~TeIGErGin-LSGGQKqRIsLARAV 658 (1381)
T KOG0054|consen 612 RYDKVIKACALKKDLE--------------------------------ILPFGDLTEIGERGIN-LSGGQKQRISLARAV 658 (1381)
T ss_pred HHHHHHHHccCHhHHh--------------------------------hcCCCCcceecCCccC-CcHhHHHHHHHHHHH
Confidence 2222222222222211 1455668999998775 999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHH-HHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH---
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVK-CVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE--- 236 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~-~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~--- 236 (1250)
++++||++||+|.|++|+++..+|++ +++.+.+ ++|+|+++|| .+..+.+|.|++|++|+|.+.|+++|+.+
T Consensus 659 Y~~adIYLLDDplSAVDahvg~~if~~ci~~~L~--~KT~ILVTHq--l~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~ 734 (1381)
T KOG0054|consen 659 YQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLR--GKTVILVTHQ--LQFLPHADQIIVLKDGKIVESGTYEELLKSGG 734 (1381)
T ss_pred hccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhc--CCEEEEEeCc--hhhhhhCCEEEEecCCeEecccCHHHHHhcch
Confidence 99999999999999999999999985 6766654 6899998775 58889999999999999999999999874
Q ss_pred HHHhCCCCCCCCCCchhHHHhhcCchhhhhhh-ccC-CCCCCC-CCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCc
Q 000860 237 FFESLGFRLPPRKGVADFLQEVTSKKDQAKYW-ADT-SKPYVF-LPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSA 313 (1250)
Q Consensus 237 ~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 313 (1250)
.|+.+ ....+.+... ... ..+... ....+. +..+. ... ..+.....+........
T Consensus 735 ~~~~l-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~-~~~~~~~~~~~~~~~~~ 792 (1381)
T KOG0054|consen 735 DFAEL-----------------AHEEESEQEEEASEKDLESGESSRESES-RSLES---LSS-EEEKSKDEKEEEDKLVQ 792 (1381)
T ss_pred hHHHH-----------------hhccchhhccccccccccccccccchhh-hhhhh---hcc-cccccccccchhhHHHH
Confidence 22221 0000000000 000 000000 000000 00000 000 00000000000000000
Q ss_pred ccccCccccHHHHHHHHHHHHHHHHhcChhHHHH-HHHHHHH-HHHHHHHhhcccCCCCCC--c---ccchhHHHHHHHH
Q 000860 314 LATTKYAVSKWELFRTCFAREILLISRHRFFYMF-RTCQVAF-VGFLTCTMFLKTRQHPTD--E---KKGALYLNCHFFG 386 (1250)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~-~~~~~~~-~~l~~g~~f~~~~~~~~~--~---~~~~~~~~~~f~~ 386 (1250)
....+...-.|+.++.+++- ......... ....... ........|+..+.+... . .+...+.+++...
T Consensus 793 ~ee~~~G~v~~~vY~~Y~~a-----~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l 867 (1381)
T KOG0054|consen 793 EEERETGKVSWSVYKKYIKA-----AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALL 867 (1381)
T ss_pred HHHHhcCEeeHHHHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHH
Confidence 00001111123333333221 011111111 1111111 111222234333322211 0 1111222211111
Q ss_pred -HHHHHHHHhhhHHHhh----hcchhHHHh------hhCCCC---------ChhHHHHHHHHHHHhHHHHHHHHHHhhhh
Q 000860 387 -MVHMMFNCFSELPILI----SRLPVFYKQ------RDNYFH---------PAWAWSIASWILRVPLSIIEAVVWSCIVY 446 (1250)
Q Consensus 387 -~~~~~~~~~~~~~~~~----~~~~v~~~e------~~~~~y---------~~~~~~la~~l~~lp~~~~~~~i~~~ivy 446 (1250)
+...++.....+.... ..+.++.+- ....|+ .-++-.+...-..+|..+...+...+.+-
T Consensus 868 ~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l 947 (1381)
T KOG0054|consen 868 GVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVL 947 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHH
Confidence 1111111111111100 001111000 001111 11111122222233433222111000000
Q ss_pred cccccc-cChhHHHHHHHHHHHHHHHHHHHH-------HHHHHhcCCHHHHHHHHHHHHHHHHHHhcccc--------cC
Q 000860 447 YTLGFA-PGAGRFFRYMLLLFSIHQMALGLY-------RMMASIARDMVIANTFGSASMLAILLLGGFII--------PK 510 (1250)
Q Consensus 447 ~~~gl~-~~~~~f~~~~~~~~~~~~~~~~l~-------~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i--------~~ 510 (1250)
..++.. .....|+.....+....+....+| .-+.++++++...++-..+..+..+-..|-.- ..
T Consensus 948 ~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~ 1027 (1381)
T KOG0054|consen 948 GILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELI 1027 (1381)
T ss_pred HHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHh
Confidence 000000 000112222222222222222222 45677888888887766554433221111000 00
Q ss_pred -CCCccc------hhhhh----hhCHHHHHHHHHHHhhcCCccccccCCCccccccchhccccccCCCCchhHHHHHHHH
Q 000860 511 -ESIKSW------WIWMY----WVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVGYNVLHSHSLPTDDYWYWLGVGVML 579 (1250)
Q Consensus 511 -~~i~~~------~~w~~----yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~ill 579 (1250)
.+...| .+|+. .++-+.....++..- +...+. . .--.+|+.+
T Consensus 1028 D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~v----------------------l~~~~~-~----~~g~vGLsl 1080 (1381)
T KOG0054|consen 1028 DENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAV----------------------LLPSGL-I----SPGLVGLSL 1080 (1381)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HccCCC-C----CcchHHHHH
Confidence 000000 01110 011111111111000 000000 0 001234444
Q ss_pred HHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCcccCCCCCcccCCCCeeEEEEeEEEEE
Q 000860 580 LYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSREDGKKKGMIMPFHPLTMTFHNISYYV 659 (1250)
Q Consensus 580 ~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 659 (1250)
.+++........+++....++.....+++.. +......+ .+...+...++++||.+| .++|+|++.+|
T Consensus 1081 syal~lt~~l~~~vR~~~elEn~m~SVERv~---eY~~~~~E-~p~~~~~~~pp~~WP~~G--------~I~f~~~~~RY 1148 (1381)
T KOG0054|consen 1081 SYALQLTGLLQWLVRQSSELENNMVSVERVL---EYTDIPSE-APLEIEESRPPPSWPSKG--------EIEFEDLSLRY 1148 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhHHH---HHhcCCCC-CCCCCcCCCCCCCCCCCC--------eEEEEEeEEEe
Confidence 4444444444444443332222111111000 00000000 001111111223344333 68999999988
Q ss_pred eCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc---ccccce
Q 000860 660 DTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARI 736 (1250)
Q Consensus 660 ~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~ 736 (1250)
.. +...+|||||++|+|||++||+|++|||||||+++|.+... +.+|+|.|||.++.+ .++|++
T Consensus 1149 rp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsr 1215 (1381)
T KOG0054|consen 1149 RP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGLHDLRSR 1215 (1381)
T ss_pred CC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccHHHHHhc
Confidence 53 34579999999999999999999999999999999998765 357999999999876 568899
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCcCCHHHHHH
Q 000860 737 SGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 737 ~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~~~~lSgGerqr 809 (1250)
++.+||||.+|. -|||+|| ++-...++++.++ +++..+|.+ ..|..+.+ ++.++|-||||.
T Consensus 1216 lsIIPQdPvLFs-GTvR~NL------DPf~e~sD~~IW~----ALe~~~Lk~~v~~~p~~Ld~~v~e-gG~N~SvGQRQL 1283 (1381)
T KOG0054|consen 1216 LSIIPQDPVLFS-GTVRFNL------DPFDEYSDDEIWE----ALERCQLKDVVSSLPGGLDSEVSE-GGENFSVGQRQL 1283 (1381)
T ss_pred CeeeCCCCceec-Ccccccc------CcccccCHHHHHH----HHHHhChHHHHhhCCcCCCceecC-CCccCChHHHHH
Confidence 999999999995 5999976 3334556666544 444444433 34555544 445799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
+|+||||+++++||+|||+|+++|++|...|+++||+.. +++|||.++|+.+ ....+|||+||++ |+++++|++
T Consensus 1284 lCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~--TVmd~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1284 LCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN--TVMDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred HHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc--hhhhcCeEEEeeC-CeEeecCCh
Confidence 999999999999999999999999999999999999875 4899999999975 5668999999986 789988887
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.6e-64 Score=674.91 Aligned_cols=211 Identities=23% Similarity=0.311 Sum_probs=177.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++|+|++++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 6899999999842 22469999999999999999999999999999999999876 4579999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-------SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~v~~~~ 798 (1250)
++ ..+|++++|||||+.+|.. |+||||.+.. ..++++ +.++++..++. .-.|+.+|+.+
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~tdee----i~~Al~~a~l~~~I~~lp~GLdt~Vge~G 1372 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHNDAD----LWESLERAHLKDVIRRNSLGLDAEVSEAG 1372 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCCHHH----HHHHHHHcCcHHHHHhCccccCccccCCC
Confidence 64 4678899999999999965 9999996531 233333 45566665553 34567777643
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+||+||||||+||++++..|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1373 -~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1373 -ENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred -CCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999875 4899999999975 5678999999985
Q ss_pred cEEEEeCCCC
Q 000860 879 GRVIYGGKLG 888 (1250)
Q Consensus 879 g~~~~~g~~~ 888 (1250)
|++++.|+++
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 7999999873
No 17
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.1e-64 Score=580.33 Aligned_cols=459 Identities=25% Similarity=0.312 Sum_probs=351.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeeEEEECCeecCccc-------ccceEEeecccc--ccCCCCCHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGN-LNKSGSITYNGWELDEFQ-------VQRASAYIGQTD--NHIAELTVRETLDF 70 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~-~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~--~~~~~~TV~e~l~f 70 (1250)
+++|+|.|||||||+.++|.|++++. ...+|+|.++|.++.... ..+.++|++|++ .+-|-+||.+.|.-
T Consensus 37 ~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E 116 (539)
T COG1123 37 ILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIRE 116 (539)
T ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHH
Confidence 47999999999999999999999865 346899999998763221 135799999996 66677899999876
Q ss_pred HHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCcccc
Q 000860 71 AARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQ 150 (1250)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 150 (1250)
..+.++.... . +.+.++.++|+..||++.... +.+.++|||||
T Consensus 117 ~~~~h~~~~~----------~------------------------ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~ 159 (539)
T COG1123 117 ALRLHGKGSR----------A------------------------EARKRAVELLEQVGLPDPERR---DRYPHQLSGGM 159 (539)
T ss_pred HHHHhccccH----------H------------------------HHHHHHHHHHHHcCCCChhhh---ccCCcccCchH
Confidence 6554431110 0 012246788999999886554 45678899999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 151 KKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 151 kqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
||||.||+||+.+|++||+||||++||+.++.+|++.|+++.++.|.++|++ +|+..-+.++||||+||.+|++++.|+
T Consensus 160 rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~I-THDl~Vva~~aDrv~Vm~~G~iVE~G~ 238 (539)
T COG1123 160 RQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFI-THDLGVVAELADRVVVMYKGEIVETGP 238 (539)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEE-cCCHHHHHHhcCeEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999999999998888887775 677888889999999999999999999
Q ss_pred hhhHHHHHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCC
Q 000860 231 RAEVLEFFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSH 310 (1250)
Q Consensus 231 ~~~~~~~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 310 (1250)
.+++.+. |.+ |++
T Consensus 239 ~~~i~~~--------p~h-------------------------pYT---------------------------------- 251 (539)
T COG1123 239 TEEILSN--------PQH-------------------------PYT---------------------------------- 251 (539)
T ss_pred HHHHHhc--------cCC-------------------------ccc----------------------------------
Confidence 9998541 110 000
Q ss_pred CCcccccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHH
Q 000860 311 PSALATTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHM 390 (1250)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~ 390 (1250)
. .+. .
T Consensus 252 ----------~-------~Ll-----------------------------------~----------------------- 256 (539)
T COG1123 252 ----------R-------GLL-----------------------------------A----------------------- 256 (539)
T ss_pred ----------H-------HHH-----------------------------------h-----------------------
Confidence 0 000 0
Q ss_pred HHHHhhhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHH
Q 000860 391 MFNCFSELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQ 470 (1250)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~ 470 (1250)
+
T Consensus 257 ---a---------------------------------------------------------------------------- 257 (539)
T COG1123 257 ---A---------------------------------------------------------------------------- 257 (539)
T ss_pred ---h----------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCc
Q 000860 471 MALGLYRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIG 550 (1250)
Q Consensus 471 ~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~ 550 (1250)
.|.. ... .
T Consensus 258 ------------------------------------------~p~~----------------------~~~--~------ 265 (539)
T COG1123 258 ------------------------------------------VPRL----------------------GDE--K------ 265 (539)
T ss_pred ------------------------------------------CCCc----------------------ccc--c------
Confidence 0000 000 0
Q ss_pred cccccchhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhcccccccccccccc
Q 000860 551 NNTVGYNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTT 630 (1250)
Q Consensus 551 ~~~~g~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1250)
. . ..
T Consensus 266 ----------------------------------------------------------~------~------~~------ 269 (539)
T COG1123 266 ----------------------------------------------------------I------I------RL------ 269 (539)
T ss_pred ----------------------------------------------------------c------c------cc------
Confidence 0 0 00
Q ss_pred CCcccCCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhC
Q 000860 631 SSREDGKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAG 710 (1250)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g 710 (1250)
...... + ....++++|+++.|..+..+. ....+...+++||||.+++||++||+|+||||||||.++|+|
T Consensus 270 -~~~~~~------~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~g 339 (539)
T COG1123 270 -PRRGPL------R-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAG 339 (539)
T ss_pred -cccccc------c-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhC
Confidence 000000 0 011478899998887543221 111235678999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEECCccC--Cc---ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Q 000860 711 RKTGGYIEGDIKISGYPK--EQ---STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSL 783 (1250)
Q Consensus 711 ~~~~~~~~G~i~~~g~~~--~~---~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~ 783 (1250)
..++ .+|.|.++|.+. +. ...++.+-+|+||+ .+.|.+||++++......... ....+.++++.++++.
T Consensus 340 L~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~~rv~~ll~~ 415 (539)
T COG1123 340 LLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERRARVAELLEL 415 (539)
T ss_pred CCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHHHHHHHHHHH
Confidence 8774 579999999762 11 23456677888886 578999999999877654432 2356677889999999
Q ss_pred cCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCC
Q 000860 784 VELDS-LRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQP 861 (1250)
Q Consensus 784 l~l~~-~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~ 861 (1250)
.||.. ..++.+. .||||||||++|||||+.+|++|++|||||.||+..+..+.+.|+++.++ |.|.|+++||.
T Consensus 416 VgL~~~~l~ryP~-----elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl 490 (539)
T COG1123 416 VGLPPEFLDRYPH-----ELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDL 490 (539)
T ss_pred cCCCHHHHhcCch-----hcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH
Confidence 99986 4555554 59999999999999999999999999999999999999999999999765 99999999998
Q ss_pred CHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 862 SIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 862 ~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
. -+...||||++|.+ |+++..||.
T Consensus 491 ~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 491 A-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred H-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 5 47789999999985 899999975
No 18
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.5e-64 Score=673.72 Aligned_cols=210 Identities=21% Similarity=0.305 Sum_probs=177.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++|+|++++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5999999999842 23469999999999999999999999999999999999876 4589999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+|++++|||||+.+|+. |+||||.+. .+.++++ +.++++..++.+ -.|+.+|+.+
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~------~~~sdee----i~~al~~a~l~~~I~~lp~GLdt~v~e~G 1369 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPF------SEHNDAD----LWEALERAHIKDVIDRNPFGLDAEVSEGG 1369 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCC------CCCCHHH----HHHHHHHcCCHHHHHhCcCCCCceecCCC
Confidence 54 5678899999999999965 999998643 1234433 556666666543 3467777643
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|+|+++|+++ ....+|+|++|++
T Consensus 1370 -~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1370 -ENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999875 5899999999974 5678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|++
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 799999986
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.5e-63 Score=658.09 Aligned_cols=216 Identities=21% Similarity=0.344 Sum_probs=179.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-------------
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG------------- 715 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~------------- 715 (1250)
.++|+||+|.|+.. +++++|+|+||+|+|||++||+||||||||||+++|.|..++.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 58999999999642 1346999999999999999999999999999999999976531
Q ss_pred ---------------------------------------eeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCHH
Q 000860 716 ---------------------------------------YIEGDIKISGYPKEQ---STFARISGYVEQEDVHSPQVTIE 753 (1250)
Q Consensus 716 ---------------------------------------~~~G~i~~~g~~~~~---~~~~~~~~yv~q~~~~~~~ltv~ 753 (1250)
+.+|+|.+||.++.. ..+|+.+|||+|++.+| ..|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 147999999998654 56788999999999988 57999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcC-------CcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000860 754 ESLWFSANLRLPKEISKDQRHEFVEEVMSLVE-------LDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMD 826 (1250)
Q Consensus 754 e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~-------l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 826 (1250)
|||.|+. + +.++++ ++++++..+ |.+-.||.+|+.+ ..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~ee----I~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATRED----VKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCHHH----HHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 1 234443 455555544 4455688898644 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCCCHHHHHhhcceeeeecC---cE-EEEeCCC
Q 000860 827 EPTSGLDARAAAIVMRAVRNTV-DTGRTVVCTIHQPSIEIFEAFDELLLMKRG---GR-VIYGGKL 887 (1250)
Q Consensus 827 EPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g---g~-~~~~g~~ 887 (1250)
||||+||+++++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999974 67889999999872 56 5578875
No 20
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-63 Score=605.54 Aligned_cols=445 Identities=21% Similarity=0.301 Sum_probs=337.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +.+|+|.++|.++.... .++.++||+|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~ 111 (506)
T PRK13549 33 IVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITP 111 (506)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccc
Confidence 47999999999999999999999752 35999999999875432 24569999999889999999999988643210
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.... ...+ ...+++++++.+||.+..++.+++ |||||||||+|
T Consensus 112 ~~~~--------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgGqkqrv~l 154 (506)
T PRK13549 112 GGIM--------DYDA------------------------MYLRAQKLLAQLKLDINPATPVGN-----LGLGQQQLVEI 154 (506)
T ss_pred cCCc--------CHHH------------------------HHHHHHHHHHHcCCCCCcccchhh-----CCHHHHHHHHH
Confidence 0000 0000 011366789999998877877765 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+.+|++|||||||+|||+.++..+.+.|+++++ .++|+|++ +|+...+.+.+|++++|++|++++.|+.+++..
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~-tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 232 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYI-SHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE 232 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCcHHHHHHhcCEEEEEECCEEeeecccccCCH
Confidence 9999999999999999999999999999999999865 47788776 456778888999999999999998877543210
Q ss_pred HHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccc
Q 000860 237 FFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALAT 316 (1250)
Q Consensus 237 ~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1250)
.+..+.
T Consensus 233 --------------------------------------------~~~~~~------------------------------ 238 (506)
T PRK13549 233 --------------------------------------------DDIITM------------------------------ 238 (506)
T ss_pred --------------------------------------------HHHHHH------------------------------
Confidence 000000
Q ss_pred cCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 000860 317 TKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCFS 396 (1250)
Q Consensus 317 ~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 396 (1250)
+. . ..
T Consensus 239 ----------------------------------------------~~--~--~~------------------------- 243 (506)
T PRK13549 239 ----------------------------------------------MV--G--RE------------------------- 243 (506)
T ss_pred ----------------------------------------------hh--C--cC-------------------------
Confidence 00 0 00
Q ss_pred hHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000860 397 ELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLY 476 (1250)
Q Consensus 397 ~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~ 476 (1250)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCccccccc
Q 000860 477 RMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVGY 556 (1250)
Q Consensus 477 ~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g~ 556 (1250)
..
T Consensus 244 ------------------------------------~~------------------------------------------ 245 (506)
T PRK13549 244 ------------------------------------LT------------------------------------------ 245 (506)
T ss_pred ------------------------------------cc------------------------------------------
Confidence 00
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCcccC
Q 000860 557 NVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSREDG 636 (1250)
Q Consensus 557 ~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1250)
.. .. . . ...
T Consensus 246 --------------------------------------------~~---~~-----------~---~--------~~~-- 254 (506)
T PRK13549 246 --------------------------------------------AL---YP-----------R---E--------PHT-- 254 (506)
T ss_pred --------------------------------------------cc---cc-----------c---c--------ccC--
Confidence 00 00 0 0 000
Q ss_pred CCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe
Q 000860 637 KKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY 716 (1250)
Q Consensus 637 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~ 716 (1250)
. + ...++++|+++.++.. +++++|+|+||+|++||+++|+||||||||||+|+|+|..++ +
T Consensus 255 ~--~------~~~l~~~~l~~~~~~~----------~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~ 315 (506)
T PRK13549 255 I--G------EVILEVRNLTAWDPVN----------PHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-R 315 (506)
T ss_pred C--C------CceEEEecCccccccc----------cccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-C
Confidence 0 0 0146788888765210 124589999999999999999999999999999999997642 1
Q ss_pred eEEEEEECCccCCc----ccccceEEEEcCCC---CCCCCCCHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHHHHcCCc
Q 000860 717 IEGDIKISGYPKEQ----STFARISGYVEQED---VHSPQVTIEESLWFSANLRLPK--EISKDQRHEFVEEVMSLVELD 787 (1250)
Q Consensus 717 ~~G~i~~~g~~~~~----~~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~l~~~~--~~~~~~~~~~v~~~l~~l~l~ 787 (1250)
.+|+|.++|.++.. ...++.++|++|++ .+++.+||.|++.+........ ..+.++.+++++++++.+++.
T Consensus 316 ~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 395 (506)
T PRK13549 316 WEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVK 395 (506)
T ss_pred CCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCcc
Confidence 47999999987542 12345689999995 4678899999998753211110 012334456789999999996
Q ss_pred -ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHH
Q 000860 788 -SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIF 866 (1250)
Q Consensus 788 -~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 866 (1250)
+..++.+++ |||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.
T Consensus 396 ~~~~~~~~~~-----LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~ 469 (506)
T PRK13549 396 TASPELAIAR-----LSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVL 469 (506)
T ss_pred CCCccccccc-----CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHH
Confidence 567777764 9999999999999999999999999999999999999999999999888999999999985 577
Q ss_pred HhhcceeeeecCcEEEEeCCCCc
Q 000860 867 EAFDELLLMKRGGRVIYGGKLGV 889 (1250)
Q Consensus 867 ~~~d~v~~l~~gg~~~~~g~~~~ 889 (1250)
+.||++++|.+ |+++..|+.+.
T Consensus 470 ~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 470 GLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HhCCEEEEEEC-CEEEEEecccc
Confidence 89999999986 78888887653
No 21
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-62 Score=607.91 Aligned_cols=226 Identities=20% Similarity=0.223 Sum_probs=184.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+...... +...+.+++|+||||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 313 ~L~~~~l~~~y~~~~~~~--~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGLL--NRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCccc--cccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEEC
Confidence 589999999885210000 000012469999999999999999999999999999999999876 3579999999875
Q ss_pred Cc------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQ------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
.. ..+++.++||+|++ .++|.+||.|++.+....+. ....++.++++.++++.+||. +..++.++
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~---- 462 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYPH---- 462 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCcc----
Confidence 42 12456799999997 58889999999987654321 112344557789999999996 56677765
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.|||||||||+|||||+.+|++|||||||+|||..++..+++.|++++++ |.|||++||+++ .+...+|++++|.+
T Consensus 463 -~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~- 539 (623)
T PRK10261 463 -EFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL- 539 (623)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 49999999999999999999999999999999999999999999999765 899999999985 57788999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 540 G~iv~~g~~ 548 (623)
T PRK10261 540 GQIVEIGPR 548 (623)
T ss_pred CEEEEecCH
Confidence 789998886
No 22
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=603.46 Aligned_cols=443 Identities=21% Similarity=0.290 Sum_probs=333.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+|||||||||||++|+|+.+|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~ 109 (510)
T PRK09700 33 IHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTK 109 (510)
T ss_pred EEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhcccccc
Confidence 47999999999999999999999864 999999999875432 23569999999889999999999987532100
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
..... ...... +.+.+++++++.+||.+..++.+++ |||||||||+|
T Consensus 110 ~~~~~----~~~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~-----LSgG~~qrv~i 156 (510)
T PRK09700 110 KVCGV----NIIDWR------------------------EMRVRAAMMLLRVGLKVDLDEKVAN-----LSISHKQMLEI 156 (510)
T ss_pred ccccc----cccCHH------------------------HHHHHHHHHHHHcCCCCCcccchhh-----CCHHHHHHHHH
Confidence 00000 000000 0012367789999998888887765 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|+|++ +|+...+..++|++++|++|++++.|+++++..
T Consensus 157 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tiiiv-sHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 157 AKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE-GTAIVYI-SHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEE-eCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999999764 7888776 466778888999999999999998887654210
Q ss_pred HHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccc
Q 000860 237 FFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALAT 316 (1250)
Q Consensus 237 ~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1250)
++..+.
T Consensus 235 --------------------------------------------~~~~~~------------------------------ 240 (510)
T PRK09700 235 --------------------------------------------DDIVRL------------------------------ 240 (510)
T ss_pred --------------------------------------------HHHHHH------------------------------
Confidence 000000
Q ss_pred cCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 000860 317 TKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCFS 396 (1250)
Q Consensus 317 ~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 396 (1250)
.. . .. .
T Consensus 241 ----------------------------------------------~~--~--~~-~----------------------- 246 (510)
T PRK09700 241 ----------------------------------------------MV--G--RE-L----------------------- 246 (510)
T ss_pred ----------------------------------------------hc--C--CC-c-----------------------
Confidence 00 0 00 0
Q ss_pred hHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000860 397 ELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLY 476 (1250)
Q Consensus 397 ~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~ 476 (1250)
.
T Consensus 247 -------------------------------------------------------~------------------------ 247 (510)
T PRK09700 247 -------------------------------------------------------Q------------------------ 247 (510)
T ss_pred -------------------------------------------------------c------------------------
Confidence 0
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCccccccc
Q 000860 477 RMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVGY 556 (1250)
Q Consensus 477 ~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g~ 556 (1250)
. .+ .
T Consensus 248 --------------------------------~---------------------------~~-----~------------ 251 (510)
T PRK09700 248 --------------------------------N---------------------------RF-----N------------ 251 (510)
T ss_pred --------------------------------c---------------------------cc-----c------------
Confidence 0 00 0
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCcccC
Q 000860 557 NVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSREDG 636 (1250)
Q Consensus 557 ~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1250)
. .. .. ... .
T Consensus 252 --------------------------------------------------~----------~~---~~-----~~~-~-- 260 (510)
T PRK09700 252 --------------------------------------------------A----------MK---EN-----VSN-L-- 260 (510)
T ss_pred --------------------------------------------------c----------cc---cc-----ccc-C--
Confidence 0 00 00 000 0
Q ss_pred CCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe
Q 000860 637 KKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY 716 (1250)
Q Consensus 637 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~ 716 (1250)
. .+..++++|+++.+ ..+|+|+|+++++||+++|+||||||||||+++|+|..+ +
T Consensus 261 ~--------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p 315 (510)
T PRK09700 261 A--------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK--R 315 (510)
T ss_pred C--------CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--C
Confidence 0 01147888887532 137999999999999999999999999999999999865 3
Q ss_pred eEEEEEECCccCCc----ccccceEEEEcCC---CCCCCCCCHHHHHHHHHhcC---CCC--C-CCHHHHHHHHHHHHHH
Q 000860 717 IEGDIKISGYPKEQ----STFARISGYVEQE---DVHSPQVTIEESLWFSANLR---LPK--E-ISKDQRHEFVEEVMSL 783 (1250)
Q Consensus 717 ~~G~i~~~g~~~~~----~~~~~~~~yv~q~---~~~~~~ltv~e~l~~~~~l~---~~~--~-~~~~~~~~~v~~~l~~ 783 (1250)
.+|+|.++|.++.. ...++.+|||+|+ ..+++.+||.|++.+....+ ... . ......++.++++++.
T Consensus 316 ~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (510)
T PRK09700 316 AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQREL 395 (510)
T ss_pred CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHh
Confidence 57999999987542 1234578999998 45788999999998753211 000 1 1222334567899999
Q ss_pred cCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCC
Q 000860 784 VELD-SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPS 862 (1250)
Q Consensus 784 l~l~-~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 862 (1250)
+++. +..++.++. |||||||||+|||+|+.+|+||+|||||+|||+.+...+++.|++++++|+|||+++|++.
T Consensus 396 ~~l~~~~~~~~~~~-----LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~ 470 (510)
T PRK09700 396 LALKCHSVNQNITE-----LSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP 470 (510)
T ss_pred cCCCCCCccCcccc-----CChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 9997 677887765 9999999999999999999999999999999999999999999999878999999999985
Q ss_pred HHHHHhhcceeeeecCcEEEEeCCC
Q 000860 863 IEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 863 ~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++...||++++|.+ |+++..++.
T Consensus 471 -~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 471 -EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred -HHHhhCCEEEEEEC-CEEEEEecC
Confidence 57889999999986 688877754
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.8e-63 Score=603.31 Aligned_cols=435 Identities=22% Similarity=0.324 Sum_probs=332.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 32 ~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~ 108 (501)
T PRK10762 32 VMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVN 108 (501)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhcccccc
Confidence 47999999999999999999999865 999999998874321 24569999999989999999999988643210
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.... ....+ .+.+++++++.+||.+..+..+++ |||||||||+|
T Consensus 109 ~~~~-------~~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~l 152 (501)
T PRK10762 109 RFGR-------IDWKK------------------------MYAEADKLLARLNLRFSSDKLVGE-----LSIGEQQMVEI 152 (501)
T ss_pred ccCc-------cCHHH------------------------HHHHHHHHHHHcCCCCCccCchhh-----CCHHHHHHHHH
Confidence 0000 00000 011356789999999888877765 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+.+|++|||||||+|||+.++.++.+.|+++.+ .++|+|++ +|+.+++.+++|+|++|++|+++..|+.+++..
T Consensus 153 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvii~-sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 153 AKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-QGRGIVYI-SHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 9999999999999999999999999999999999865 47787776 466788889999999999999998776543210
Q ss_pred HHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccc
Q 000860 237 FFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALAT 316 (1250)
Q Consensus 237 ~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1250)
++..+.
T Consensus 231 --------------------------------------------~~~~~~------------------------------ 236 (501)
T PRK10762 231 --------------------------------------------DSLIEM------------------------------ 236 (501)
T ss_pred --------------------------------------------HHHHHH------------------------------
Confidence 000000
Q ss_pred cCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 000860 317 TKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCFS 396 (1250)
Q Consensus 317 ~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 396 (1250)
+. . ..
T Consensus 237 ----------------------------------------------~~--~--~~------------------------- 241 (501)
T PRK10762 237 ----------------------------------------------MV--G--RK------------------------- 241 (501)
T ss_pred ----------------------------------------------hc--C--CC-------------------------
Confidence 00 0 00
Q ss_pred hHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000860 397 ELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLY 476 (1250)
Q Consensus 397 ~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~ 476 (1250)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCccccccc
Q 000860 477 RMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVGY 556 (1250)
Q Consensus 477 ~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g~ 556 (1250)
.
T Consensus 242 ------------------------------------~------------------------------------------- 242 (501)
T PRK10762 242 ------------------------------------L------------------------------------------- 242 (501)
T ss_pred ------------------------------------c-------------------------------------------
Confidence 0
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCcccC
Q 000860 557 NVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSREDG 636 (1250)
Q Consensus 557 ~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1250)
.. . . ... +..
T Consensus 243 -------------------------------------------~~-----~--------~------~~~------~~~-- 252 (501)
T PRK10762 243 -------------------------------------------ED-----Q--------Y------PRL------DKA-- 252 (501)
T ss_pred -------------------------------------------cc-----c--------c------ccc------ccC--
Confidence 00 0 0 000 000
Q ss_pred CCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe
Q 000860 637 KKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY 716 (1250)
Q Consensus 637 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~ 716 (1250)
. .+..++++|++. ++|+|+|+++++||+++|+||||||||||+++|+|..+ +
T Consensus 253 ~--------~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p 304 (501)
T PRK10762 253 P--------GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP--R 304 (501)
T ss_pred C--------CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC--C
Confidence 0 001366777652 26999999999999999999999999999999999875 3
Q ss_pred eEEEEEECCccCCcc----cccceEEEEcCCC---CCCCCCCHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHHHHcCC
Q 000860 717 IEGDIKISGYPKEQS----TFARISGYVEQED---VHSPQVTIEESLWFSANLRLP---KEISKDQRHEFVEEVMSLVEL 786 (1250)
Q Consensus 717 ~~G~i~~~g~~~~~~----~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~l~~~---~~~~~~~~~~~v~~~l~~l~l 786 (1250)
.+|+|.++|.++... ..++.+|||+|++ .+++.+||.|++.+....... ...+.++.+++++++++.+++
T Consensus 305 ~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 384 (501)
T PRK10762 305 TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNI 384 (501)
T ss_pred CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCC
Confidence 579999999875421 2345699999996 577889999999875311100 012233445678899999999
Q ss_pred c-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHH
Q 000860 787 D-SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEI 865 (1250)
Q Consensus 787 ~-~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~ 865 (1250)
. +..++.++. ||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++
T Consensus 385 ~~~~~~~~~~~-----LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~ 458 (501)
T PRK10762 385 KTPSMEQAIGL-----LSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EV 458 (501)
T ss_pred CCCCccCchhh-----CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HH
Confidence 5 567777764 9999999999999999999999999999999999999999999999878999999999985 57
Q ss_pred HHhhcceeeeecCcEEEEeCCCCc
Q 000860 866 FEAFDELLLMKRGGRVIYGGKLGV 889 (1250)
Q Consensus 866 ~~~~d~v~~l~~gg~~~~~g~~~~ 889 (1250)
...+|++++|++ |+++..|+.+.
T Consensus 459 ~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 459 LGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HhhCCEEEEEEC-CEEEEEecccc
Confidence 889999999985 78888887643
No 24
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.3e-62 Score=599.62 Aligned_cols=218 Identities=23% Similarity=0.344 Sum_probs=177.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEEC-Ccc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS-GYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~-g~~ 727 (1250)
.++++|+++.++... .+++++|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 279 ~l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~ 348 (520)
T TIGR03269 279 IIKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDE 348 (520)
T ss_pred eEEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCc
Confidence 478899998774210 013469999999999999999999999999999999999875 357999996 532
Q ss_pred ---CCc------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-----ccccc
Q 000860 728 ---KEQ------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-----LRHAL 793 (1250)
Q Consensus 728 ---~~~------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~ 793 (1250)
... ...++.+||++|++.+++.+||.|++.+...+. .+.++.+++++++++.++|.+ ..++.
T Consensus 349 ~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 424 (520)
T TIGR03269 349 WVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY 424 (520)
T ss_pred cccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC
Confidence 111 123456999999998899999999998764322 223334567889999999975 35666
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcce
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
++ .|||||||||+|||||+.+|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+...+|++
T Consensus 425 ~~-----~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i 498 (520)
T TIGR03269 425 PD-----ELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRA 498 (520)
T ss_pred hh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEE
Confidence 64 49999999999999999999999999999999999999999999999764 899999999985 577889999
Q ss_pred eeeecCcEEEEeCCC
Q 000860 873 LLMKRGGRVIYGGKL 887 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~ 887 (1250)
++|.+ |+++..|++
T Consensus 499 ~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 499 ALMRD-GKIVKIGDP 512 (520)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 788888875
No 25
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.1e-62 Score=598.89 Aligned_cols=226 Identities=24% Similarity=0.327 Sum_probs=180.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+..... .+...+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ .+|+|.++|.++
T Consensus 275 ~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i 349 (529)
T PRK15134 275 LLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPL 349 (529)
T ss_pred cccccCcEEEeecCccc--cccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEc
Confidence 36788888877421000 0000013469999999999999999999999999999999999763 479999999875
Q ss_pred Ccc------cccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQS------TFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~~------~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
... .+++.++|++|++ .+++.+||+|++.+....+.. ..+..+.+++++++++.++|. +..++.++.
T Consensus 350 ~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 425 (529)
T PRK15134 350 HNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYPAE--- 425 (529)
T ss_pred cccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCCcc---
Confidence 321 1345689999996 477889999999886543211 123344556788999999997 466776654
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
|||||||||+|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++...+|++++|++
T Consensus 426 --LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~- 501 (529)
T PRK15134 426 --FSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ- 501 (529)
T ss_pred --CCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-
Confidence 9999999999999999999999999999999999999999999999765 899999999985 57788999999986
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 502 G~i~~~~~~ 510 (529)
T PRK15134 502 GEVVEQGDC 510 (529)
T ss_pred CEEEEEcCH
Confidence 788888875
No 26
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.4e-61 Score=649.71 Aligned_cols=210 Identities=20% Similarity=0.260 Sum_probs=177.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++|+|++++|+.. ..++|+|||++|+|||++||+||||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 1284 ~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 69999999998531 2369999999999999999999999999999999999876 4579999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+|++++|||||+.+|+. |+||||... ...++++ +.++++..++.+ -.|+.+|+.+
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~------~~~sdee----i~~al~~a~l~~~I~~lp~GLdt~v~e~G 1419 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF------SQYSDEE----VWWALELAHLKTFVSALPDKLDHECAEGG 1419 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc------cCCCHHH----HHHHHHHcCcHHHHhhCccCCCceecCCC
Confidence 64 4678899999999999975 999998521 1234433 556666666643 3567777633
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1420 -~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1420 -ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK- 1494 (1522)
T ss_pred -CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999875 5899999999974 6778999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|++
T Consensus 1495 G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 GEVAEFGAP 1503 (1522)
T ss_pred CEEEEECCH
Confidence 899999986
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5e-62 Score=595.71 Aligned_cols=438 Identities=21% Similarity=0.291 Sum_probs=329.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 39 ~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-- 113 (510)
T PRK15439 39 VHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-- 113 (510)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc--
Confidence 47999999999999999999999865 999999998875322 124699999999999999999999875210
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
. . .. +++++++++.+||.+..+..+++ |||||||||+|
T Consensus 114 ---~-----~---~~--------------------------~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~l 151 (510)
T PRK15439 114 ---R-----Q---AS--------------------------MQKMKQLLAALGCQLDLDSSAGS-----LEVADRQIVEI 151 (510)
T ss_pred ---c-----h---HH--------------------------HHHHHHHHHHcCCCccccCChhh-----CCHHHHHHHHH
Confidence 0 0 00 01256789999998877877765 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+.+|++|||||||+|||+.++..+.+.|+++++ .|+|+|++ +|+..++.++||+|++|++|++++.|+++++.+
T Consensus 152 a~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiv-tHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 152 LRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-QGVGIVFI-SHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 9999999999999999999999999999999999875 47888776 456777888999999999999999988766421
Q ss_pred HHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCcccc
Q 000860 237 FFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALAT 316 (1250)
Q Consensus 237 ~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1250)
. + ..+.+.. .. .
T Consensus 230 ~---------------~-----------------------------~~~~~~~------------~~--~---------- 241 (510)
T PRK15439 230 D---------------D-----------------------------IIQAITP------------AA--R---------- 241 (510)
T ss_pred H---------------H-----------------------------HHHHHhC------------cc--c----------
Confidence 0 0 0000000 00 0
Q ss_pred cCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 000860 317 TKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCFS 396 (1250)
Q Consensus 317 ~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 396 (1250)
.......
T Consensus 242 --------------------------------------------------~~~~~~~----------------------- 248 (510)
T PRK15439 242 --------------------------------------------------EKSLSAS----------------------- 248 (510)
T ss_pred --------------------------------------------------ccccccc-----------------------
Confidence 0000000
Q ss_pred hHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000860 397 ELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGLY 476 (1250)
Q Consensus 397 ~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l~ 476 (1250)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCccccccc
Q 000860 477 RMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVGY 556 (1250)
Q Consensus 477 ~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g~ 556 (1250)
...
T Consensus 249 -------------------------------------~~~---------------------------------------- 251 (510)
T PRK15439 249 -------------------------------------QKL---------------------------------------- 251 (510)
T ss_pred -------------------------------------ccc----------------------------------------
Confidence 000
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCcccC
Q 000860 557 NVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSREDG 636 (1250)
Q Consensus 557 ~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1250)
+ . . . .. .+.. .
T Consensus 252 ---------------~--------------------------~-------~----------~----~~------~~~~-~ 262 (510)
T PRK15439 252 ---------------W--------------------------L-------E----------L----PG------NRRQ-Q 262 (510)
T ss_pred ---------------c--------------------------c-------c----------c----cc------cccc-c
Confidence 0 0 0 0 00 0000 0
Q ss_pred CCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe
Q 000860 637 KKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY 716 (1250)
Q Consensus 637 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~ 716 (1250)
+ . .+..++++|++. .+|+|+|+++++||++||+||||||||||+++|+|..+ +
T Consensus 263 ~-~------~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p 315 (510)
T PRK15439 263 A-A------GAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRP--A 315 (510)
T ss_pred C-C------CCceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--C
Confidence 0 0 011467777762 14899999999999999999999999999999999865 3
Q ss_pred eEEEEEECCccCCcc----cccceEEEEcCCC---CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-c
Q 000860 717 IEGDIKISGYPKEQS----TFARISGYVEQED---VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-S 788 (1250)
Q Consensus 717 ~~G~i~~~g~~~~~~----~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~ 788 (1250)
.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++........+........++.++++++.+++. +
T Consensus 316 ~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 395 (510)
T PRK15439 316 RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFN 395 (510)
T ss_pred CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCC
Confidence 479999999875431 1245689999984 4788899999986421111111111223345688999999997 6
Q ss_pred cccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh
Q 000860 789 LRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEA 868 (1250)
Q Consensus 789 ~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 868 (1250)
..++.++. ||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|++++++|.|||+++|++. ++.+.
T Consensus 396 ~~~~~~~~-----LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~ 469 (510)
T PRK15439 396 HAEQAART-----LSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQM 469 (510)
T ss_pred CccCcccc-----CCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHh
Confidence 77777754 9999999999999999999999999999999999999999999999878999999999985 67889
Q ss_pred hcceeeeecCcEEEEeCCCC
Q 000860 869 FDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 869 ~d~v~~l~~gg~~~~~g~~~ 888 (1250)
||++++|.+ |+++..|..+
T Consensus 470 ~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 470 ADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCEEEEEEC-CEEEEEEccc
Confidence 999999985 7888887764
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.3e-62 Score=594.78 Aligned_cols=221 Identities=19% Similarity=0.313 Sum_probs=179.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+... +++.+|+|+||++++||+++|+|||||||||||++|+|..++ +.+|+|.++|.++
T Consensus 257 ~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~ 325 (500)
T TIGR02633 257 ILEARNLTCWDVIN----------PHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPV 325 (500)
T ss_pred eEEEeCCccccccc----------ccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEEC
Confidence 47888888654210 123589999999999999999999999999999999998652 1479999999876
Q ss_pred Cc----ccccceEEEEcCCC---CCCCCCCHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCC
Q 000860 729 EQ----STFARISGYVEQED---VHSPQVTIEESLWFSAN--LRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPG 798 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~--l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~ 798 (1250)
.. ...++.+||++|+. .+++.+||+|++.+... ..........+.+++++++++.+++.+ ..++.++.
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 403 (500)
T TIGR02633 326 DIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGR-- 403 (500)
T ss_pred CCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcccc--
Confidence 42 12356789999995 57889999999987532 110001223344567889999999974 56777754
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.+|++++|.+
T Consensus 404 ---LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~- 478 (500)
T TIGR02633 404 ---LSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE- 478 (500)
T ss_pred ---CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-
Confidence 9999999999999999999999999999999999999999999999888999999999985 57789999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..++.
T Consensus 479 G~i~~~~~~ 487 (500)
T TIGR02633 479 GKLKGDFVN 487 (500)
T ss_pred CEEEEEEcc
Confidence 788877654
No 29
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-61 Score=585.99 Aligned_cols=205 Identities=20% Similarity=0.289 Sum_probs=171.2
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCC---CCCC
Q 000860 676 QLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ----STFARISGYVEQED---VHSP 748 (1250)
Q Consensus 676 ~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~yv~q~~---~~~~ 748 (1250)
.+++|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 37999999999999999999999999999999999875 357999999987532 12345789999996 4788
Q ss_pred CCCHHHHHHHHHhcCC-CCC--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEE
Q 000860 749 QVTIEESLWFSANLRL-PKE--ISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIF 824 (1250)
Q Consensus 749 ~ltv~e~l~~~~~l~~-~~~--~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~ 824 (1250)
.+||.|++.+...... +.. ......++.++++++.+++. +..++.++. |||||||||+||++|+.+|++|+
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMN-----LSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcccc-----CCHHHHHHHHHHHHHccCCCEEE
Confidence 9999999987532110 001 12233345688999999994 677888765 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCc
Q 000860 825 MDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGV 889 (1250)
Q Consensus 825 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~ 889 (1250)
|||||+|||+.+...+++.|++++++|.|||+++||+. ++.+.+|++++|.+ |++++.|+.+.
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 99999999999999999999999888999999999985 57889999999985 78888887754
No 30
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.5e-60 Score=635.97 Aligned_cols=211 Identities=22% Similarity=0.268 Sum_probs=178.0
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++|+||+++|+. +.+.+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 36999999999853 22459999999999999999999999999999999999876 457999999998
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSP 797 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~ 797 (1250)
+.. ..+|+.++|||||+.+|.. ||+|||... ...+++ .+.++++..++.+ -.|+.+|+.
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~sde----eI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEASSA----EVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCCHH----HHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4678899999999999865 999999421 133433 3667777777654 357777763
Q ss_pred CCCcCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 798 GSFGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~-p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
+ .+||||||||++|||||+++ |+||+||||||+||+++...|++.|++.. +++|||+++|++ +....||+|++|+
T Consensus 1443 G-~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 G-SNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMD 1518 (1560)
T ss_pred c-CcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEE
Confidence 3 47999999999999999995 89999999999999999999999999864 489999999997 4678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 31
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-60 Score=579.04 Aligned_cols=435 Identities=19% Similarity=0.269 Sum_probs=327.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc----cccceEEeeccccccCCCCCHHHHHHHHHHc-c
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF----QVQRASAYIGQTDNHIAELTVRETLDFAARC-Q 75 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~-~ 75 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|+++... ..++.++|++|++.+++.+||+||+.++... .
T Consensus 26 ~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~ 102 (491)
T PRK10982 26 IHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTK 102 (491)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccCCCHHHHhhccccccc
Confidence 47999999999999999999999864 99999999987532 1246799999998888999999999875311 1
Q ss_pred CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhH
Q 000860 76 GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
+.... ..+ ...+++++++.+|+.+..++.+++ |||||||||+
T Consensus 103 ~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgGq~qrv~ 144 (491)
T PRK10982 103 GMFVD---------QDK------------------------MYRDTKAIFDELDIDIDPRAKVAT-----LSVSQMQMIE 144 (491)
T ss_pred ccccC---------HHH------------------------HHHHHHHHHHHcCCCCCccCchhh-----CCHHHHHHHH
Confidence 00000 000 001356789999998777777654 9999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|++|||||||+|||+.++..+.+.|+++++ .++|+|++ +|+.+++.+.||++++|++|+++..|++++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~-tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYI-SHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-ecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 99999999999999999999999999999999999865 47888776 45677888899999999999999877654320
Q ss_pred HHHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCccc
Q 000860 236 EFFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALA 315 (1250)
Q Consensus 236 ~~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1250)
. ++..+.
T Consensus 223 ~--------------------------------------------~~~~~~----------------------------- 229 (491)
T PRK10982 223 M--------------------------------------------DKIIAM----------------------------- 229 (491)
T ss_pred H--------------------------------------------HHHHHH-----------------------------
Confidence 0 000000
Q ss_pred ccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 000860 316 TTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCF 395 (1250)
Q Consensus 316 ~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 395 (1250)
+. . ..
T Consensus 230 -----------------------------------------------~~--~--~~------------------------ 234 (491)
T PRK10982 230 -----------------------------------------------MV--G--RS------------------------ 234 (491)
T ss_pred -----------------------------------------------Hh--C--CC------------------------
Confidence 00 0 00
Q ss_pred hhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHH
Q 000860 396 SELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGL 475 (1250)
Q Consensus 396 ~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l 475 (1250)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCcccccc
Q 000860 476 YRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVG 555 (1250)
Q Consensus 476 ~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g 555 (1250)
.
T Consensus 235 -------------------------------------~------------------------------------------ 235 (491)
T PRK10982 235 -------------------------------------L------------------------------------------ 235 (491)
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred chhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCccc
Q 000860 556 YNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSRED 635 (1250)
Q Consensus 556 ~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1250)
.. . . .. . . .
T Consensus 236 --------------------------------------------~~-----~--------~------~~-----~-~-~- 244 (491)
T PRK10982 236 --------------------------------------------TQ-----R--------F------PD-----K-E-N- 244 (491)
T ss_pred --------------------------------------------cc-----c--------c------cc-----c-c-C-
Confidence 00 0 0 00 0 0 0
Q ss_pred CCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC
Q 000860 636 GKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG 715 (1250)
Q Consensus 636 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~ 715 (1250)
.. .+..++++|+++.. +++|+|+|+++++||+++|+||||||||||+++|+|..+
T Consensus 245 ~~--------~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~-- 299 (491)
T PRK10982 245 KP--------GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE-- 299 (491)
T ss_pred CC--------CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--
Confidence 00 01147888887641 248999999999999999999999999999999999876
Q ss_pred eeEEEEEECCccCCcc----cccceEEEEcCCC---CCCCCCCHHHHHHHHH--hcCCCCC-CCHHHHHHHHHHHHHHcC
Q 000860 716 YIEGDIKISGYPKEQS----TFARISGYVEQED---VHSPQVTIEESLWFSA--NLRLPKE-ISKDQRHEFVEEVMSLVE 785 (1250)
Q Consensus 716 ~~~G~i~~~g~~~~~~----~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~--~l~~~~~-~~~~~~~~~v~~~l~~l~ 785 (1250)
+.+|+|.++|.++... ..++.++|++|++ .+++.+|+.++..+.. ....... .+....++.++++++.++
T Consensus 300 p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 379 (491)
T PRK10982 300 KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMR 379 (491)
T ss_pred CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcC
Confidence 3579999999876431 1245689999985 3678888887742221 0000001 122344567888999999
Q ss_pred Cc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHH
Q 000860 786 LD-SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIE 864 (1250)
Q Consensus 786 l~-~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~ 864 (1250)
+. +..++.++. ||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ +
T Consensus 380 l~~~~~~~~~~~-----LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~ 453 (491)
T PRK10982 380 VKTPGHRTQIGS-----LSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-E 453 (491)
T ss_pred ccCCCccccccc-----CCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-H
Confidence 95 456777654 9999999999999999999999999999999999999999999999888999999999985 5
Q ss_pred HHHhhcceeeeecCcEEEEeCCCC
Q 000860 865 IFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 865 ~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
+...+|++++|.+ |+++..++.+
T Consensus 454 ~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 454 LLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred HHhhCCEEEEEEC-CEEEEEEccc
Confidence 7789999999986 7887766543
No 32
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.9e-58 Score=619.63 Aligned_cols=209 Identities=22% Similarity=0.315 Sum_probs=177.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..+ .+|+|.+||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 6999999999853 23569999999999999999999999999999999999864 479999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
+. ..+|+.++||||++.+|+. ||||||... ...++ +.+.++++..+|.+ -.|+.+++ +
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~------~~~td----eei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY------EQWSD----EEIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc------cCCCH----HHHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 64 4578899999999999975 999999432 12333 34667777777643 35677775 3
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
+.+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|++ +....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl--~ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRV--EALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999875 479999999997 46778999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 789888886
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.3e-59 Score=571.82 Aligned_cols=214 Identities=21% Similarity=0.326 Sum_probs=168.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 489999998773 23589999999999999999999999999999999996531 1479999999764
Q ss_pred Cc----ccccceEEEEcCCCCCCC--CCCHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000860 729 EQ----STFARISGYVEQEDVHSP--QVTIEESLWFSAN--LRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGS 799 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~--~ltv~e~l~~~~~--l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~ 799 (1250)
.. ...++.+||++|++.+++ ..|+++++.+... ........ .+.+++++++++.++|.+ ..++.++.
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 401 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPFHS--- 401 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCchhh---
Confidence 22 123567999999876543 3577776654321 01111111 233457889999999987 77777754
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCC-EEEEEecCCCHHHHH-hhcceeeeec
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGR-TVVCTIHQPSIEIFE-AFDELLLMKR 877 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~-tvi~~~H~~~~~~~~-~~d~v~~l~~ 877 (1250)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|. |||+++|++. ++.+ .+|++++|.+
T Consensus 402 --LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 402 --LSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 999999999999999999999999999999999999999999999987764 6999999985 4555 5899999986
Q ss_pred CcEEEEe
Q 000860 878 GGRVIYG 884 (1250)
Q Consensus 878 gg~~~~~ 884 (1250)
|++++.
T Consensus 479 -G~i~~~ 484 (490)
T PRK10938 479 -GDIYRY 484 (490)
T ss_pred -CceEEe
Confidence 565554
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-58 Score=497.62 Aligned_cols=452 Identities=23% Similarity=0.325 Sum_probs=350.0
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCeecC---ccccc----ceEEeecccc--ccCCCCCHHHHHHH
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGN--LNKSGSITYNGWELD---EFQVQ----RASAYIGQTD--NHIAELTVRETLDF 70 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~--~~~~G~v~~~g~~~~---~~~~~----~~~~yv~Q~~--~~~~~~TV~e~l~f 70 (1250)
+||||.||||||-..+.++|+++.. ...+|+|.++|.++- +...+ ..|+.++|++ .+-|-.|+...|.-
T Consensus 39 lAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E 118 (534)
T COG4172 39 LALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAE 118 (534)
T ss_pred EEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHH
Confidence 6999999999999999999999752 345899999999873 22222 3589999997 67777788888876
Q ss_pred HHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCcccc
Q 000860 71 AARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQ 150 (1250)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 150 (1250)
..+++..-.. .+.+.++-++|+..|+++-.... +.+..+|||||
T Consensus 119 ~l~~Hrg~~~----------------------------------~~Ar~r~lelL~~VgI~~p~~rl--~~yPHeLSGGq 162 (534)
T COG4172 119 VLRLHRGLSR----------------------------------AAARARALELLELVGIPEPEKRL--DAYPHELSGGQ 162 (534)
T ss_pred HHHHHhcccH----------------------------------HHHHHHHHHHHHHcCCCchhhhh--hhCCcccCcch
Confidence 6655421110 11123466788888987643322 24567899999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 151 KKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 151 kqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
||||.||+||+.+|++||-||||++||...+.+|++.|+++.++.|..++++ +|+..-+-+++|||+||.+|+++++|+
T Consensus 163 RQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfI-THDL~iVr~~ADrV~VM~~G~ivE~~~ 241 (534)
T COG4172 163 RQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFI-THDLGIVRKFADRVYVMQHGEIVETGT 241 (534)
T ss_pred hhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEE-eccHHHHHHhhhhEEEEeccEEeecCc
Confidence 9999999999999999999999999999999999999999998889888876 567787888999999999999999999
Q ss_pred hhhHHHHHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCC
Q 000860 231 RAEVLEFFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSH 310 (1250)
Q Consensus 231 ~~~~~~~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 310 (1250)
.+++.. .|.+. |
T Consensus 242 t~~lF~--------~PqHp-----------------Y------------------------------------------- 253 (534)
T COG4172 242 TETLFA--------APQHP-----------------Y------------------------------------------- 253 (534)
T ss_pred HHHHhh--------CCCCh-----------------H-------------------------------------------
Confidence 877632 11100 0
Q ss_pred CCcccccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHH
Q 000860 311 PSALATTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHM 390 (1250)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~ 390 (1250)
. |..+ +.
T Consensus 254 --------------------T-r~Ll------------------------------~a---------------------- 260 (534)
T COG4172 254 --------------------T-RKLL------------------------------AA---------------------- 260 (534)
T ss_pred --------------------H-HHHH------------------------------hc----------------------
Confidence 0 0000 00
Q ss_pred HHHHhhhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHH
Q 000860 391 MFNCFSELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQ 470 (1250)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~ 470 (1250)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCc
Q 000860 471 MALGLYRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIG 550 (1250)
Q Consensus 471 ~~~~l~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~ 550 (1250)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccchhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhcccccccccccccc
Q 000860 551 NNTVGYNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTT 630 (1250)
Q Consensus 551 ~~~~g~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1250)
+. .
T Consensus 261 -------------------------------------------------eP----------------------------~ 263 (534)
T COG4172 261 -------------------------------------------------EP----------------------------S 263 (534)
T ss_pred -------------------------------------------------CC----------------------------C
Confidence 00 0
Q ss_pred CCcccCCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhC
Q 000860 631 SSREDGKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAG 710 (1250)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g 710 (1250)
..+.+.+ +..++.++.+|+...++.+..+-.. ......++++||+++++||.++|+|.||||||||=.+|.+
T Consensus 264 g~~~p~~------~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allr 335 (534)
T COG4172 264 GDPPPLP------EDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLR 335 (534)
T ss_pred CCCCCCC------CCCCceEEecceEEEEecCCccccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHh
Confidence 0000000 0112357777877777665432211 1234568999999999999999999999999999999998
Q ss_pred CCCCCeeEEEEEECCccCCc------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q 000860 711 RKTGGYIEGDIKISGYPKEQ------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMS 782 (1250)
Q Consensus 711 ~~~~~~~~G~i~~~g~~~~~------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~ 782 (1250)
..++ +|+|.++|.++.. ..+|+.+-.|+||| .+.|.+||.|.+.-+....-| ..+.+++.+++.++++
T Consensus 336 L~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~ 411 (534)
T COG4172 336 LIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALE 411 (534)
T ss_pred hcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHH
Confidence 7753 5999999998753 24577888999998 478999999999888776654 4678899999999999
Q ss_pred HcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecC
Q 000860 783 LVELDSL-RHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQ 860 (1250)
Q Consensus 783 ~l~l~~~-~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~ 860 (1250)
..||+.. .++.. ..+|||||||++|||||+.+|++++||||||+||..-+.+|+++|+++.+ .|.+-++++||
T Consensus 412 EVGLDp~~r~RYP-----hEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHD 486 (534)
T COG4172 412 EVGLDPATRNRYP-----HEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHD 486 (534)
T ss_pred HcCCChhHhhcCC-----cccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEecc
Confidence 9999763 34433 35999999999999999999999999999999999999999999999864 48999999999
Q ss_pred CCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 861 PSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 861 ~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
.. -+-.+||+|+||.+ |++++.|+.
T Consensus 487 L~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 487 LA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 75 47789999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.9e-57 Score=555.57 Aligned_cols=201 Identities=23% Similarity=0.328 Sum_probs=164.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 589999998773 2458999999999999999999999999999999999876 35799998542
Q ss_pred CcccccceEEEEcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000860 729 EQSTFARISGYVEQED-VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~~~lSgGe 806 (1250)
..+||++|++ .+++.+||+|++.+...... .... ...++++++.+++.+ ..++.++. |||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~~-----LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKVGV-----LSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCchhh-----CCHHH
Confidence 1489999996 67889999999987643221 1111 123457899999964 45676654 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE-EeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI-YGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~-~~g 885 (1250)
|||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. | |||+++|++. .+...+|++++|.+||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999975 5778899999998656655 455
Q ss_pred C
Q 000860 886 K 886 (1250)
Q Consensus 886 ~ 886 (1250)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-57 Score=553.39 Aligned_cols=198 Identities=20% Similarity=0.289 Sum_probs=165.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 589999998873 2358999999999999999999999999999999999865 35799999873
Q ss_pred CcccccceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHH
Q 000860 729 EQSTFARISGYVEQEDV--HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~~lSgG 805 (1250)
+.+||++|++. +.+.+||+|++.+.. .. ...+++++++++.+++. +..++.++. ||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~-----LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-----GDDEQAVRGTLGRLLFSQDDIKKSVKV-----LSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-----CccHHHHHHHHHHcCCChhHhcCcccc-----cCHH
Confidence 45899999864 456799999986421 01 11234578899999994 566777754 9999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE-Ee
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI-YG 884 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~-~~ 884 (1250)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||++||++. .+...+|++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999876 459999999985 57778999999986 5665 77
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.9e-56 Score=551.82 Aligned_cols=201 Identities=22% Similarity=0.322 Sum_probs=164.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 589999998773 2469999999999999999999999999999999999865 35799998542
Q ss_pred CcccccceEEEEcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000860 729 EQSTFARISGYVEQED-VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~~~lSgGe 806 (1250)
..+||++|++ .+++.+||.|++.+..... ..... ...++++++.+++.+ ..++.++. |||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~-----LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDII---QLGKR--EVPSRAYVGRFNFKGSDQQKKVGQ-----LSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhcccc---ccCcc--hHHHHHHHHhCCCChhHhcCchhh-----CCHHH
Confidence 1589999996 4778899999998764321 11111 123557899999964 45776654 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE-EeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI-YGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~-~~g 885 (1250)
||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++. .|||+++|++. .+...+|++++|++||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999975 5777899999998656655 545
Q ss_pred C
Q 000860 886 K 886 (1250)
Q Consensus 886 ~ 886 (1250)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.3e-55 Score=537.89 Aligned_cols=211 Identities=22% Similarity=0.275 Sum_probs=174.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ..|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~~--------------~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLGD--------------FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEECC--------------EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 5889999987631 24899999999999999999999999999999999876 357999885
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.+++ |||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~~~-----LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNVKD-----LSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCccc-----CCHHHHH
Confidence 1489999998888899999999875321 111 12467899999999888888765 9999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999975 5777899999995 4 66666654
Q ss_pred Ccc---chhHHHHhhhC
Q 000860 888 GVH---SQIMIDYFQGL 901 (1250)
Q Consensus 888 ~~~---~~~~~~yf~~~ 901 (1250)
... ...+..|++++
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 13456677777
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-53 Score=528.72 Aligned_cols=197 Identities=22% Similarity=0.334 Sum_probs=162.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+ ++.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 589999998873 2469999999999999999999999999999999999875 35799998641
Q ss_pred CcccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHH
Q 000860 729 EQSTFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~~~lSgG 805 (1250)
..+||++|+. .+.+..|+.+++.- .. .....+.+.++++.+++.. ..++.++. ||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~~------~~~~~~~~~~~L~~~~l~~~~~~~~~~~-----LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---LA------PQELEQKLRDYLGGFGFQGDKVTEETRR-----FSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---hC------chhhHHHHHHHHHHcCCChhHhcCchhh-----CCHH
Confidence 2589999974 34566788776531 11 1122456788999999963 56777764 9999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE-Ee
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI-YG 884 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~-~~ 884 (1250)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||+++||+. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999975 57788999999986 6665 88
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.3e-53 Score=533.24 Aligned_cols=202 Identities=23% Similarity=0.326 Sum_probs=166.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 589999998773 2458999999999999999999999999999999999865 35799988 4321
Q ss_pred CcccccceEEEEcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHH
Q 000860 729 EQSTFARISGYVEQED-VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~~lSgGe 806 (1250)
.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..++.++. |||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~-----LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTPVKA-----LSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhChhhh-----CCHHH
Confidence 489999985 578899999999875321 0 111 1234577889999985 456777754 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee-cCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK-RGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-~gg~~~~~g 885 (1250)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||++||+.. .+...+|+++++. +|+...|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999974 5778899999997 565566777
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
+.
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 65
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-52 Score=482.39 Aligned_cols=432 Identities=23% Similarity=0.342 Sum_probs=333.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+.+|+|.||||||||+|+|+|.++|+ +|+|.+||++..... .+.-|+.|.|+..+.|++||.|||.++...+.
T Consensus 36 V~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~ 112 (500)
T COG1129 36 VHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTR 112 (500)
T ss_pred EEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccCCccHHHHhhccccccc
Confidence 47999999999999999999999975 999999999875333 23558999999999999999999987754332
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... . ++.. ...+++.++|+.+|+....+++|++ ||+||||-|+|
T Consensus 113 ~~g-~------id~~------------------------~m~~~A~~~l~~lg~~~~~~~~v~~-----LsiaqrQ~VeI 156 (500)
T COG1129 113 RFG-L------IDRK------------------------AMRRRARELLARLGLDIDPDTLVGD-----LSIAQRQMVEI 156 (500)
T ss_pred CCC-c------cCHH------------------------HHHHHHHHHHHHcCCCCChhhhhhh-----CCHHHHHHHHH
Confidence 100 0 0000 0112356789999996558888887 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh-hhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR-AEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~-~~~~ 235 (1250)
||||..+++|++||||||+|+......+++.++++.+ .|.++|.+ +|..+|+++.||||.||+||+.+..++. ++.-
T Consensus 157 ArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~-~Gv~ii~I-SHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~ 234 (500)
T COG1129 157 ARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA-QGVAIIYI-SHRLDEVFEIADRITVLRDGRVVGTRPTAAETS 234 (500)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEE-cCcHHHHHHhcCEEEEEeCCEEeeecccccCCC
Confidence 9999999999999999999999999999999999975 58888876 5689999999999999999999877653 2210
Q ss_pred HHHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCccc
Q 000860 236 EFFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALA 315 (1250)
Q Consensus 236 ~~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1250)
.++..+
T Consensus 235 --------------------------------------------~~~lv~------------------------------ 240 (500)
T COG1129 235 --------------------------------------------EDELVR------------------------------ 240 (500)
T ss_pred --------------------------------------------HHHHHH------------------------------
Confidence 000000
Q ss_pred ccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 000860 316 TTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCF 395 (1250)
Q Consensus 316 ~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 395 (1250)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHH
Q 000860 396 SELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGL 475 (1250)
Q Consensus 396 ~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l 475 (1250)
.|+|
T Consensus 241 ---------------------------------------------------~MvG------------------------- 244 (500)
T COG1129 241 ---------------------------------------------------LMVG------------------------- 244 (500)
T ss_pred ---------------------------------------------------HhhC-------------------------
Confidence 0000
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCcccccc
Q 000860 476 YRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVG 555 (1250)
Q Consensus 476 ~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g 555 (1250)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCccc
Q 000860 556 YNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSRED 635 (1250)
Q Consensus 556 ~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1250)
... . . ... . ..
T Consensus 245 r~~------~--~------------------------------------------------------~~~------~-~~ 255 (500)
T COG1129 245 REL------E--D------------------------------------------------------LFP------E-PP 255 (500)
T ss_pred cch------h--h------------------------------------------------------hcc------c-cc
Confidence 000 0 0 000 0 00
Q ss_pred CCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC
Q 000860 636 GKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG 715 (1250)
Q Consensus 636 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~ 715 (1250)
.. ...+..++++|++.. ..++|+||++++||+++|.|-=|||+|-|+++|.|..+
T Consensus 256 ~~------~~~~~~l~v~~l~~~-----------------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~-- 310 (500)
T COG1129 256 EE------GIGEPVLEVRNLSGG-----------------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP-- 310 (500)
T ss_pred cc------CCCCcEEEEecCCCC-----------------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--
Confidence 00 000124566666521 13789999999999999999999999999999999654
Q ss_pred eeEEEEEECCccCCcc----cccceEEEEcCC---CCCCCCCCHHHHHHHHHhcCCC-C-CCCHHHHHHHHHHHHHHcCC
Q 000860 716 YIEGDIKISGYPKEQS----TFARISGYVEQE---DVHSPQVTIEESLWFSANLRLP-K-EISKDQRHEFVEEVMSLVEL 786 (1250)
Q Consensus 716 ~~~G~i~~~g~~~~~~----~~~~~~~yv~q~---~~~~~~ltv~e~l~~~~~l~~~-~-~~~~~~~~~~v~~~l~~l~l 786 (1250)
..+|+|.+||.++... ..+.-++|||.| +-+++.++|++|+.++...+.. . -.+....++.+++.++.+++
T Consensus 311 ~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~I 390 (500)
T COG1129 311 ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRI 390 (500)
T ss_pred CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCc
Confidence 3589999999986532 345578999988 4578899999999988322211 1 24556667788999999988
Q ss_pred ccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHH
Q 000860 787 DSL-RHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEI 865 (1250)
Q Consensus 787 ~~~-~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~ 865 (1250)
... .+..++ .||||.+|||.|||.|..+|+||+|||||.|.|..+..+|.++|++++++|++||+++.+. +|+
T Consensus 391 k~~s~~~~v~-----~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSEl-pEl 464 (500)
T COG1129 391 KTPSPEQPIG-----TLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSEL-PEL 464 (500)
T ss_pred ccCCccchhh-----cCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCCh-HHH
Confidence 643 334554 4999999999999999999999999999999999999999999999999999999999997 489
Q ss_pred HHhhcceeeeecCcEEEEe
Q 000860 866 FEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 866 ~~~~d~v~~l~~gg~~~~~ 884 (1250)
..+||||+||.+ |+++-.
T Consensus 465 l~~~DRIlVm~~-Gri~~e 482 (500)
T COG1129 465 LGLSDRILVMRE-GRIVGE 482 (500)
T ss_pred HhhCCEEEEEEC-CEEEEE
Confidence 999999999986 676653
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.2e-51 Score=513.23 Aligned_cols=200 Identities=20% Similarity=0.281 Sum_probs=158.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. ++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~~------------~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYPG------------GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeCC------------CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 5899999988731 2358999999999999999999999999999999999876 35799988652
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~~~lSgGer 807 (1250)
..+||++|+.. +.+++.++.........+ ... .+.++++++.+++.+ ..+..++ .||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~~~-----~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQPMY-----TLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCCcc-----ccCHHHH
Confidence 35899999852 445666654322111111 111 245788999999974 5566654 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE-EeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI-YGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~-~~g~ 886 (1250)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. +.|||+++|++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 349999999975 57778999999986 6766 7776
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.8e-51 Score=486.77 Aligned_cols=199 Identities=27% Similarity=0.346 Sum_probs=161.2
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|+++.|+. ++.+++++|+.|++|+.+||+||||+|||||||+|+|...+ .+|.|.+...
T Consensus 320 ~vl~~~~~~~~y~~------------~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~--~~G~v~~g~~- 384 (530)
T COG0488 320 LVLEFENVSKGYDG------------GRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGP--LSGTVKVGET- 384 (530)
T ss_pred eeEEEeccccccCC------------CceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhccc--CCceEEeCCc-
Confidence 36899999988742 25799999999999999999999999999999999997653 3788876422
Q ss_pred CCcccccceEEEEcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHH
Q 000860 728 KEQSTFARISGYVEQED-VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGSFGLSTE 805 (1250)
Q Consensus 728 ~~~~~~~~~~~yv~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~~~lSgG 805 (1250)
-.+||.+|+. .+.+..|+.|++.-.. | .. .+..+...+..+++..- ..+.++ .||||
T Consensus 385 -------v~igyf~Q~~~~l~~~~t~~d~l~~~~----~-~~----~e~~~r~~L~~f~F~~~~~~~~v~-----~LSGG 443 (530)
T COG0488 385 -------VKIGYFDQHRDELDPDKTVLEELSEGF----P-DG----DEQEVRAYLGRFGFTGEDQEKPVG-----VLSGG 443 (530)
T ss_pred -------eEEEEEEehhhhcCccCcHHHHHHhhC----c-cc----cHHHHHHHHHHcCCChHHHhCchh-----hcCHh
Confidence 2489999995 4457889999875321 1 11 14557888999998654 345555 49999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||.|+.+|+.++.+|.+|+|||||++||..+...+.+.|.+. ..|||+++||.. -+-..+++++++.+ +...|.|
T Consensus 444 Ek~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~VSHDr~-Fl~~va~~i~~~~~-~~~~~~g 518 (530)
T COG0488 444 EKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLLVSHDRY-FLDRVATRIWLVED-KVEEFEG 518 (530)
T ss_pred HHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEEEeCCHH-HHHhhcceEEEEcC-ceeEcCC
Confidence 999999999999999999999999999999999999999865 569999999975 47788999999975 5566656
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
..
T Consensus 519 ~y 520 (530)
T COG0488 519 GY 520 (530)
T ss_pred CH
Confidence 54
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.7e-48 Score=437.08 Aligned_cols=440 Identities=21% Similarity=0.280 Sum_probs=340.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+.||+|.||||||||+++|.|.++|+ +|+|.++|+++.-.. .+.-||.|.|+..+++++||.|||..+.....
T Consensus 32 IHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~ 108 (501)
T COG3845 32 IHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSK 108 (501)
T ss_pred EEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeeccccccccchhhhhhhcCcccc
Confidence 46899999999999999999999975 999999999875332 35569999999999999999999988754211
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .... ..+.+++++.+..||+-..|..|++ ||-||||||.|
T Consensus 109 ~~~------~~~~--------------------------~~~~~i~~l~~~yGl~vdp~~~V~d-----LsVG~qQRVEI 151 (501)
T COG3845 109 GGL------IDRR--------------------------QARARIKELSERYGLPVDPDAKVAD-----LSVGEQQRVEI 151 (501)
T ss_pred ccc------cCHH--------------------------HHHHHHHHHHHHhCCCCCccceeec-----CCcchhHHHHH
Confidence 000 0000 0122477888999999888888887 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh-hhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR-AEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~-~~~~ 235 (1250)
-++|+++|++|||||||+-|-|....++++.|+++++ .|+|||++ +|-..|+.+.+||+.||++|+++..-++ .+.
T Consensus 152 lKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~G~tIi~I-THKL~Ev~~iaDrvTVLR~Gkvvgt~~~~~~~- 228 (501)
T COG3845 152 LKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-EGKTIIFI-THKLKEVMAIADRVTVLRRGKVVGTVDPVAET- 228 (501)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEE-eccHHHHHHhhCeeEEEeCCeEEeeecCCCCC-
Confidence 9999999999999999999999999999999999976 58999886 5678999999999999999998643221 000
Q ss_pred HHHHhCCCCCCCCCCchhHHHhhcCchhhhhhhccCCCCCCCCCHHHHHHHHHhChhhhhhHhhccCCCCCCCCCCCccc
Q 000860 236 EFFESLGFRLPPRKGVADFLQEVTSKKDQAKYWADTSKPYVFLPVSEIANAFKSSRFGKSLESSLAVPFDKSKSHPSALA 315 (1250)
Q Consensus 236 ~~f~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1250)
+.++.++.
T Consensus 229 -------------------------------------------t~~ela~l----------------------------- 236 (501)
T COG3845 229 -------------------------------------------TEEELAEL----------------------------- 236 (501)
T ss_pred -------------------------------------------CHHHHHHH-----------------------------
Confidence 00000000
Q ss_pred ccCccccHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 000860 316 TTKYAVSKWELFRTCFAREILLISRHRFFYMFRTCQVAFVGFLTCTMFLKTRQHPTDEKKGALYLNCHFFGMVHMMFNCF 395 (1250)
Q Consensus 316 ~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 395 (1250)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHhhhcchhHHHhhhCCCCChhHHHHHHHHHHHhHHHHHHHHHHhhhhcccccccChhHHHHHHHHHHHHHHHHHHH
Q 000860 396 SELPILISRLPVFYKQRDNYFHPAWAWSIASWILRVPLSIIEAVVWSCIVYYTLGFAPGAGRFFRYMLLLFSIHQMALGL 475 (1250)
Q Consensus 396 ~~~~~~~~~~~v~~~e~~~~~y~~~~~~la~~l~~lp~~~~~~~i~~~ivy~~~gl~~~~~~f~~~~~~~~~~~~~~~~l 475 (1250)
|
T Consensus 237 ----------------------------------------------------M--------------------------- 237 (501)
T COG3845 237 ----------------------------------------------------M--------------------------- 237 (501)
T ss_pred ----------------------------------------------------h---------------------------
Confidence 0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhCHHHHHHHHHHHhhcCCccccccCCCcccccc
Q 000860 476 YRMMASIARDMVIANTFGSASMLAILLLGGFIIPKESIKSWWIWMYWVSPLSYGQSAISVNEFTATRWMKKSAIGNNTVG 555 (1250)
Q Consensus 476 ~~~i~~~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~yisp~~y~~~a~~~~ef~~~~~~~~~~~~~~~~g 555 (1250)
+|
T Consensus 238 ------------------------------------------------------------------------------vG 239 (501)
T COG3845 238 ------------------------------------------------------------------------------VG 239 (501)
T ss_pred ------------------------------------------------------------------------------cC
Confidence 00
Q ss_pred chhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCccccccccccchhhhccccccccccccccCCccc
Q 000860 556 YNVLHSHSLPTDDYWYWLGVGVMLLYAWLFNNIMTLALAYLNPLRKSQVVIQSDDREENSVKKGVASQGCELKTTSSRED 635 (1250)
Q Consensus 556 ~~~l~~~~~~~~~~~~w~~~~ill~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1250)
..+.. . ... .+
T Consensus 240 ~~v~~----------------------------------------------~---------------~~~-----~~--- 250 (501)
T COG3845 240 REVVL----------------------------------------------R---------------VVK-----PP--- 250 (501)
T ss_pred Ccccc----------------------------------------------c---------------ccc-----CC---
Confidence 00000 0 000 00
Q ss_pred CCCCCcccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC
Q 000860 636 GKKKGMIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG 715 (1250)
Q Consensus 636 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~ 715 (1250)
.. | ....++++|++..-.. ..+.+++|||++++||++||.|-.|-|-+.|+.+|+|..+.
T Consensus 251 -~~-----p-g~~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~- 310 (501)
T COG3845 251 -ST-----P-GEVVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP- 310 (501)
T ss_pred -CC-----C-CCeEEEEeeeEeecCC------------CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc-
Confidence 00 0 0125888998864321 24579999999999999999999999999999999997653
Q ss_pred eeEEEEEECCccC-C---cc-cccceEEEEcCCC---CCCCCCCHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHHHH
Q 000860 716 YIEGDIKISGYPK-E---QS-TFARISGYVEQED---VHSPQVTIEESLWFSANLRLP----KEISKDQRHEFVEEVMSL 783 (1250)
Q Consensus 716 ~~~G~i~~~g~~~-~---~~-~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~l~~~----~~~~~~~~~~~v~~~l~~ 783 (1250)
.+|+|.++|.++ . .. ..+.-+||||.|. .+.+.+|+.||+.+...-+.| .-.+..+.++...++++.
T Consensus 311 -~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~ 389 (501)
T COG3845 311 -ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEE 389 (501)
T ss_pred -CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHH
Confidence 359999999986 2 22 2334689999985 456899999999877543211 124456778888999999
Q ss_pred cCCcccc-cccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCC
Q 000860 784 VELDSLR-HALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPS 862 (1250)
Q Consensus 784 l~l~~~~-~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 862 (1250)
+++.... +..+ +.||||++||+-+||+|.++|++|+..+||.|||..+...|.+.|.+.+++|+.|++++-+..
T Consensus 390 fdVr~~~~~~~a-----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD 464 (501)
T COG3845 390 FDVRAPSPDAPA-----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD 464 (501)
T ss_pred cCccCCCCCcch-----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH
Confidence 9887332 2223 469999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHhhcceeeeecCcEEEEeCCCCc
Q 000860 863 IEIFEAFDELLLMKRGGRVIYGGKLGV 889 (1250)
Q Consensus 863 ~~~~~~~d~v~~l~~gg~~~~~g~~~~ 889 (1250)
|++.++|||.+|.+ |+++...++..
T Consensus 465 -Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 465 -EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred -HHHHhhheeeeeeC-Cceeccccccc
Confidence 79999999999985 78888777653
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-47 Score=380.92 Aligned_cols=215 Identities=27% Similarity=0.388 Sum_probs=192.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|. +.++|+|||++|++||+++|+|||||||||||++|.+... +.+|+|.++|.++
T Consensus 2 mi~i~~l~K~fg-------------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~ 66 (240)
T COG1126 2 MIEIKNLSKSFG-------------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDV 66 (240)
T ss_pred eEEEEeeeEEeC-------------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEec
Confidence 478999998874 4679999999999999999999999999999999999776 4589999999764
Q ss_pred C----cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 E----QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~----~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
. -...|+.+|+|+|+..|||++||.||+..+...- .+.++++.+++..++|+.+||.+.+|..+. .|||
T Consensus 67 ~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----qLSG 139 (240)
T COG1126 67 GDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYPA-----QLSG 139 (240)
T ss_pred cchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----ccCc
Confidence 3 2357889999999999999999999999885322 356788888999999999999999998876 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
||+|||+|||||+.+|+++++|||||+|||+...++.+.+++++++|.|.|++||+... ..+.+|||+.|++ |+++..
T Consensus 140 GQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~ 217 (240)
T COG1126 140 GQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEE 217 (240)
T ss_pred HHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999763 6788999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|++
T Consensus 218 g~p 220 (240)
T COG1126 218 GPP 220 (240)
T ss_pred cCH
Confidence 876
No 46
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-44 Score=380.44 Aligned_cols=218 Identities=24% Similarity=0.346 Sum_probs=193.8
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++++++.+... ..+...+|+|||++|++||+.||+|+||||||||++++.+... +.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 6889999877531 1134579999999999999999999999999999999999766 45899999997754
Q ss_pred c------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 Q------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
. +..|+.||+++|+..++...||.||+.|...+. +.++++++++|.++++.+||++.++..+. +||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeia---g~~k~ei~~RV~elLelVgL~dk~~~yP~-----qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELA---GVPKAEIKQRVAELLELVGLSDKADRYPA-----QLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhc---CCCHHHHHHHHHHHHHHcCChhhhccCch-----hcC
Confidence 3 346789999999999999999999999998775 46789999999999999999999988875 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
|||||||+|||||+.+|+||++|||||+|||.+...|.+.|+++.++ |.||+++||++. -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999998654 999999999974 36779999999985 8999
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99986
No 47
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-44 Score=364.23 Aligned_cols=213 Identities=26% Similarity=0.384 Sum_probs=192.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++|+|+++.|. ++++++|+|++|++||++.++|||||||||+||+|.+... +.+|+|.+||.+++
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 68999998774 4579999999999999999999999999999999999877 45899999999876
Q ss_pred c---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCH
Q 000860 730 Q---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS--LRHALVGSPGSFGLST 804 (1250)
Q Consensus 730 ~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~v~~~~~~~lSg 804 (1250)
. ..+|+.||||-|+-.+||++||.||+.+-..+. +.++++++++++|+++++||+. +.++.+. .|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRYPH-----ELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----hcCc
Confidence 4 467899999999999999999999999877664 6788999999999999999974 6777664 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
||+|||.+||||+.+|+||+||||+++|||-++..+++.++++.+. |+|||++|||.. |.++++|||++|++ |+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999998655 999999999985 78999999999985 78887
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.+++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 7776
No 48
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.3e-43 Score=366.79 Aligned_cols=208 Identities=28% Similarity=0.441 Sum_probs=178.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.|.... ...++|+++|++|++||+++|||||||||||||++|+|...+ .+|.|.++|.++.
T Consensus 2 i~~~~v~k~y~~~~---------~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~ 70 (226)
T COG1136 2 IELKNVSKIYGLGG---------EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLT 70 (226)
T ss_pred cEEeeeEEEeccCC---------cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcC
Confidence 46788888775421 235799999999999999999999999999999999998764 5899999997754
Q ss_pred c------ccc-cceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCc
Q 000860 730 Q------STF-ARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRH-ALVGSPGSFG 801 (1250)
Q Consensus 730 ~------~~~-~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~v~~~~~~~ 801 (1250)
. ..+ ++.+|||+|+..++|.+||+||+.+...+.. ....+.+++++++++.+||.+..+ +.+. .
T Consensus 71 ~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~---~~~~~~~~~~~~l~~~lgl~~~~~~~~p~-----e 142 (226)
T COG1136 71 KLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAG---KSAGRRKRAAEELLEVLGLEDRLLKKKPS-----E 142 (226)
T ss_pred cCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcC---CChhHHHHHHHHHHHhcCChhhhccCCch-----h
Confidence 2 123 4579999999999999999999998775542 223356778899999999997666 6565 4
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
|||||||||+|||||+.+|+|++.||||.+||+.++..|++.++++.++ |+|||++|||| ++...+||++.|.+|
T Consensus 143 LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG 218 (226)
T COG1136 143 LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDG 218 (226)
T ss_pred cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999765 99999999996 588899999999874
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-43 Score=359.18 Aligned_cols=229 Identities=25% Similarity=0.378 Sum_probs=200.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++++++++ +++.|++|||++|++||+++||||||+|||||||+|.|..+ +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 58999999876 35679999999999999999999999999999999999877 4589999999986
Q ss_pred Cc------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000860 729 EQ------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~~~ 801 (1250)
.+ ...++++|+++|+-.||..+||+||+.|..+-. ...+++..++.+..-++.+||... .+..+. .
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~--~~lp~~~i~~lv~~KL~~VGL~~~~~~~~Ps-----E 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREH--TKLPESLIRELVLMKLELVGLRGAAADLYPS-----E 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheehHhh--ccCCHHHHHHHHHHHHHhcCCChhhhhhCch-----h
Confidence 43 245778999999999999999999999975433 356778888889999999999887 666665 4
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||++||++||||++.||+|+++||||+||||.++..+.++|+++.++ |.|++++|||.. +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999776 999999999986 68999999999986 89
Q ss_pred EEEeCCCCcc----chhHHHHhhhC
Q 000860 881 VIYGGKLGVH----SQIMIDYFQGL 901 (1250)
Q Consensus 881 ~~~~g~~~~~----~~~~~~yf~~~ 901 (1250)
++..|++++. ..-+.+||...
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~ 248 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGI 248 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCC
Confidence 9999998631 13467888765
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.3e-43 Score=393.01 Aligned_cols=224 Identities=31% Similarity=0.479 Sum_probs=196.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+.. ++.+|+||||++++||++|++||||||||||+|+|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~~------------~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYGG------------DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeCC------------CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 4678899987731 36799999999999999999999999999999999998773 689999999886
Q ss_pred Cc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
.. ...++.+||+||++.++|.+||+|++.|.+.++.+.. +..+++++++++.++|.+..++.++ +||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~~-----~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKVR-----TLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcchh-----hcCHHH
Confidence 54 4567889999999999999999999999999885432 4556789999999999986666665 599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCC-CEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTG-RTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||++||+||+.+|+++||||||+|||+.++..+.+.|++++++| +||+++||+++ ++...||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999985 68888999999985 8999999
Q ss_pred CCCccchhHHHHhhh
Q 000860 886 KLGVHSQIMIDYFQG 900 (1250)
Q Consensus 886 ~~~~~~~~~~~yf~~ 900 (1250)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 76 445555543
No 51
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-43 Score=365.85 Aligned_cols=204 Identities=26% Similarity=0.388 Sum_probs=182.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+.++++++.+. ..++|+|+|++|++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 478889988774 2579999999999999999999999999999999999877 4589999999987
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
.. -...+|||+|++.++|.+||+||+.++...+. .++++.+++++++++.+||.+..|..+. .|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYPH-----QLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCcc-----ccChHHHH
Confidence 32 34678999999999999999999999887652 4566777799999999999999999875 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||+|||||+.+|+||+||||+++||+.|+..+++.|.++.+ .++||+++|||.. |...+.|||++|+++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999988764 5899999999985 677899999999863
No 52
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-43 Score=357.84 Aligned_cols=220 Identities=25% Similarity=0.348 Sum_probs=190.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++..|+ +++++|+|||++|++||++||+|||||||||||++|.|... +.+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 689999999885 24679999999999999999999999999999999999765 4589999999765
Q ss_pred Cc------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000860 729 EQ------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-----KEISKDQRHEFVEEVMSLVELDSLRHALVGSP 797 (1250)
Q Consensus 729 ~~------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~ 797 (1250)
.. +.+|+.+||++|++.+.|.+||.+|+..+..-+.+ .+...++.+..+-+.++.+|+.+.+.++.++
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~- 147 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAST- 147 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhcc-
Confidence 32 34678899999999999999999999877432222 1222345556678899999999999888875
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
|||||+|||+|||||+.+|+|++.|||+++||+.+++.+|+.|+++.+ .|.|||++.||... ..+.|||++-|.
T Consensus 148 ----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 148 ----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 999999999999999999999999999999999999999999999875 48999999999753 668999999998
Q ss_pred cCcEEEEeCCCCc
Q 000860 877 RGGRVIYGGKLGV 889 (1250)
Q Consensus 877 ~gg~~~~~g~~~~ 889 (1250)
+ |+++|+||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 53
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-42 Score=367.70 Aligned_cols=216 Identities=25% Similarity=0.431 Sum_probs=186.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. + ++|+|||+++++||+++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 5899999998852 2 59999999999999999999999999999999999776 4689999999987
Q ss_pred CcccccceEEEEcCCC---CCCCCCCHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 729 EQSTFARISGYVEQED---VHSPQVTIEESLWFSANLRL--PKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~l~~--~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
....-+.+||||||.. .-| ..||+|.+..+..-+. -...+ ++.++.++++|+.+|+.+.+|+.+|+ ||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~f-P~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~~-----LS 141 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSF-PITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIGE-----LS 141 (254)
T ss_pred cccccCCeEEEcCcccccCCCC-CcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCcccc-----cC
Confidence 6544457899999964 233 4799998887632221 11223 33478899999999999999999987 99
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||+|||-|||||+++|++|+|||||+|+|+.++..+.++|++++++|+||++++||+. .+.+.||+|+.|+ +++.+
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~ 218 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIA 218 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEe
Confidence 99999999999999999999999999999999999999999999988999999999996 5889999999996 58888
Q ss_pred eCCCCc
Q 000860 884 GGKLGV 889 (1250)
Q Consensus 884 ~g~~~~ 889 (1250)
.|++++
T Consensus 219 ~G~~~~ 224 (254)
T COG1121 219 SGPPEE 224 (254)
T ss_pred ccChhh
Confidence 898864
No 54
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.1e-43 Score=373.24 Aligned_cols=218 Identities=28% Similarity=0.394 Sum_probs=189.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++.+|+++.|+ ++.+|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 478999999884 4579999999999999999999999999999999999776 3579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPK-EISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. +.+.+.+|||||+....+.+||+|-+.++..-+... ....++.++.++++++.+|+.+.+++.+.+ |||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~-----LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDE-----LSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccc-----cCh
Confidence 54 457789999999998888999999998874432211 112334455799999999999999999875 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||+.|||||+++|+||+||||||+||...+.++++.++++++ +|+|||+++||++ .....||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN-~A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLN-LAARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 5999999999997 47889999999985 78888
Q ss_pred eCCCC
Q 000860 884 GGKLG 888 (1250)
Q Consensus 884 ~g~~~ 888 (1250)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 88875
No 55
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.5e-42 Score=338.14 Aligned_cols=212 Identities=27% Similarity=0.379 Sum_probs=186.3
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++|+||++.|+. .+.+|+||||+|++||++-|+||||||||||||+|.+... +..|+|.+||.++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 688999988753 3569999999999999999999999999999999999765 45799999999865
Q ss_pred c------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 Q------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
. .-+||+||+|+||..++++.||+||+.|+.... +.+.++.+++|.++++..||.+.++..+. .||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARALPS-----QLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcCcc-----ccC
Confidence 3 236889999999999999999999999987765 45678889999999999999999888765 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhh-cceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAF-DELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~-d~v~~l~~gg~~~ 882 (1250)
|||+|||+||||++.+|++|+.||||.+||+..+.+|++++.++.+.|.|||+.||+. ++.... -+++.|++ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999998999999999994 455544 56777875 7887
Q ss_pred EeCC
Q 000860 883 YGGK 886 (1250)
Q Consensus 883 ~~g~ 886 (1250)
.+..
T Consensus 217 ~d~~ 220 (223)
T COG2884 217 RDES 220 (223)
T ss_pred eccc
Confidence 7644
No 56
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-43 Score=344.92 Aligned_cols=215 Identities=28% Similarity=0.405 Sum_probs=193.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++..+++++|+. ..++++||||+++.||++||+|||||||||+|++|++... +.+|.|.+||.+..
T Consensus 2 l~v~~l~K~y~~------------~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~ 67 (245)
T COG4555 2 LEVTDLTKSYGS------------KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTV 67 (245)
T ss_pred eeeeehhhhccC------------HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccc
Confidence 566777777643 2348999999999999999999999999999999999877 45899999999854
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
+ ...++.+|.++.+.-++..||++|||.|.+++. +.+..+.+++++++.+.|+|.++.|+++|+ +|.|+|
T Consensus 68 ~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~~-----~S~G~k 139 (245)
T COG4555 68 RDPSFVRRKIGVLFGERGLYARLTARENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVGE-----FSTGMK 139 (245)
T ss_pred cChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHhh-----hchhhH
Confidence 3 457889999998888899999999999999886 566778889999999999999999999985 999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|||+|||||+.+|++++|||||||||..+.+.+.+.++++...|++||+++|..+ |+..+||++++|++ |++++.|+.
T Consensus 140 qkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 140 QKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred HHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 9999999999999999999999999999999999999999888999999999984 78889999999986 799999986
Q ss_pred C
Q 000860 888 G 888 (1250)
Q Consensus 888 ~ 888 (1250)
.
T Consensus 218 ~ 218 (245)
T COG4555 218 E 218 (245)
T ss_pred H
Confidence 3
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-42 Score=381.30 Aligned_cols=215 Identities=27% Similarity=0.418 Sum_probs=195.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|.. ..+|+|+|++|+.||.++|+|||||||||||++|||..+ +.+|+|.++|.++
T Consensus 3 ~i~l~~v~K~yg~-------------~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFGS-------------FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcCC-------------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 5899999988742 128999999999999999999999999999999999876 4689999999998
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
+. ...+|.+|+|+|+..++|++||+||+.|+.+++ +.++++.+++|+++.+.|+|++..|+++. +||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----QLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCcc-----cCChhhH
Confidence 76 456788999999999999999999999998776 45788899999999999999999999875 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||. .|...++|||++|. +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 89999999997 57899999999998 589999888
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 74
No 58
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-42 Score=382.47 Aligned_cols=216 Identities=28% Similarity=0.421 Sum_probs=195.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|. +..+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 689999998874 4579999999999999999999999999999999999876 4589999999998
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
.. ...+|.+|+|+|+-.+||+|||+||+.|+.+++ ....+++++++|+++++.++|++.+++.+.. |||||+
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~q-----LSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKPHQ-----LSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhChhh-----hChHHH
Confidence 65 346788999999999999999999999998743 3345677889999999999999999988864 999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++|+||||.|+||..-+.+++.-|+++.++ |.|.|++|||.. |...+.|||++|++ |+++.-|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998654 999999999974 78899999999985 89999998
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
++
T Consensus 221 P~ 222 (352)
T COG3842 221 PE 222 (352)
T ss_pred HH
Confidence 74
No 59
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.4e-41 Score=378.51 Aligned_cols=200 Identities=20% Similarity=0.249 Sum_probs=155.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+.++|++|.|+. +..++++++|-+.+++.+|++||||+|||||||++.|...+ ..|.|.-.-+.
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc-
Confidence 5788999987753 22689999999999999999999999999999999997663 45666433221
Q ss_pred CcccccceEEEEcCC--CCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCCHH
Q 000860 729 EQSTFARISGYVEQE--DVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLR-HALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~--~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~v~~~~~~~lSgG 805 (1250)
.+++..|. +.+.-+.++-|++.=. .+++...+.+..++..+||.... +..++ .||+|
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p~~-----~LS~G 513 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVPMS-----QLSDG 513 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccchh-----hcccc
Confidence 22334443 2233355666655321 11133456678899999999544 44443 59999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||+||..|+.++..|.||+|||||+|||..+...+.+.|.+. ..+||+++||-. -+-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999865 468999999975 4778899999999988888888
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 75
No 60
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-42 Score=361.10 Aligned_cols=205 Identities=31% Similarity=0.467 Sum_probs=184.9
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCc---cCCc-ccccceEEEEcCCCCCCCC
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGY---PKEQ-STFARISGYVEQEDVHSPQ 749 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~---~~~~-~~~~~~~~yv~q~~~~~~~ 749 (1250)
...+++|||+.|+.||++|++|||||||||||++|+|..+ +..|.|.+||. +.++ ....|++|||+|+..+|++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999877 45899999999 5554 3446789999999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000860 750 VTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPT 829 (1250)
Q Consensus 750 ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPT 829 (1250)
+||.+|+.|+.+++ ....++.+++.+++++++.+.|++..+..+. +|||||||||++||||+..|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYPA-----QLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCch-----hcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 2334567888999999999999999988774 59999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 830 SGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 830 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
++||..-+.++.+.|+++.++ |.|+|++|||+. |+++.+|||++|++ |+++..|+++
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999998766 999999999985 79999999999986 7999989874
No 61
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-41 Score=338.52 Aligned_cols=217 Identities=25% Similarity=0.360 Sum_probs=187.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC---CCCeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~---~~~~~~G~i~~~g 725 (1250)
.++.+|+++.|. ++++|+|||+.|++++++|++|||||||||||++|.... ++-..+|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578999999884 467999999999999999999999999999999999843 3346789999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGS 799 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~ 799 (1250)
.++-. ..+|+++|+|+|.|.-|| +|++||+.|+.++.- ..+++.++.|++.++...|.+. .|++-.+ .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g---~~~~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHG---IKDKELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhc---cchHHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 98643 357899999999999999 899999999988763 2336778889999998888654 4444332 2
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.+|||||+||+||||+|+.+|+||+||||||+|||.+...|.+++.+++ +.-|||++||.+. ...+..|+...+.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 4699999999999999999999999999999999999999999999997 5789999999984 57788999999986 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
+++++|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999986
No 62
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-42 Score=344.83 Aligned_cols=203 Identities=25% Similarity=0.403 Sum_probs=168.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc----ccccceEEeeccccccCCCCCHHHHHHHHHHc-c
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE----FQVQRASAYIGQTDNHIAELTVRETLDFAARC-Q 75 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~----~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~-~ 75 (1250)
+++|+|||||||||||++|.|+.+++ +|+|.++|.++.. ...|+.+|+|+|+..+||++||.||+..+... +
T Consensus 30 vv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~ 106 (240)
T COG1126 30 VVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVK 106 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHHc
Confidence 47899999999999999999999865 9999999987632 24688999999999999999999999887532 1
Q ss_pred CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhH
Q 000860 76 GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
+.+. . +.+++..+.|+.+||.+.+|.... +|||||||||+
T Consensus 107 ~~~k-----------~------------------------eA~~~A~~lL~~VGL~~ka~~yP~-----qLSGGQqQRVA 146 (240)
T COG1126 107 KLSK-----------A------------------------EAREKALELLEKVGLADKADAYPA-----QLSGGQQQRVA 146 (240)
T ss_pred CCCH-----------H------------------------HHHHHHHHHHHHcCchhhhhhCcc-----ccCcHHHHHHH
Confidence 1110 0 012235678999999998887654 49999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|+++|+|||||+|||....++++.+++++++ |.|.|+++ |....+.+.+|||+.|++|+++++|+++++.
T Consensus 147 IARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e-GmTMivVT-HEM~FAr~VadrviFmd~G~iie~g~p~~~f 224 (240)
T COG1126 147 IARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE-GMTMIIVT-HEMGFAREVADRVIFMDQGKIIEEGPPEEFF 224 (240)
T ss_pred HHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc-CCeEEEEe-chhHHHHHhhheEEEeeCCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999975 88988875 5577788899999999999999999998873
Q ss_pred HHHHhCCCCCCCCCCchhHHH
Q 000860 236 EFFESLGFRLPPRKGVADFLQ 256 (1250)
Q Consensus 236 ~~f~~lG~~~~~~~~~~~~~~ 256 (1250)
..|.+....+|+.
T Consensus 225 --------~~p~~~R~~~FL~ 237 (240)
T COG1126 225 --------DNPKSERTRQFLS 237 (240)
T ss_pred --------cCCCCHHHHHHHH
Confidence 3455444555554
No 63
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.3e-36 Score=398.49 Aligned_cols=216 Identities=22% Similarity=0.349 Sum_probs=189.2
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 36899999988742 13569999999999999999999999999999999999876 358999999998
Q ss_pred CCc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 728 KEQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 728 ~~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
+.. ...++.+|||+|++.+++.+||+|++.|.++++ +.+.++.+++++++++.+||.+..|+.+++ ||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lk---g~~~~~~~~~v~~lL~~vgL~~~~~~~~~~-----LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLK---GRSWEEAQLEMEAMLEDTGLHHKRNEEAQD-----LSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChhh-----CCHH
Confidence 643 234677999999999999999999999987765 233445567789999999999988888765 9999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||||+||+||+.+|+|++|||||+|||+.+++.+++.|++++ +|+|||++||++. ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999985 57778999999985 7899988
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 86
No 64
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.7e-40 Score=373.22 Aligned_cols=214 Identities=29% Similarity=0.419 Sum_probs=189.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 689999999873 2469999999999999999999999999999999999876 3589999999986
Q ss_pred Cc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
.. ...++.+|||||++.+++.+||+||+.|.+.++ ..+..+..++++++++.++|.+..++.++. |||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYF---GLSAAAARALVPPLLEFAKLENKADAKVGE-----LSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchHhcCchhh-----CCHHH
Confidence 43 235678999999999999999999999876653 234445566788999999999888888864 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999985 68889999999985 79999998
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 65
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.6e-40 Score=323.20 Aligned_cols=196 Identities=28% Similarity=0.413 Sum_probs=174.3
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCHHHHHHH
Q 000860 680 NVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-STFARISGYVEQEDVHSPQVTIEESLWF 758 (1250)
Q Consensus 680 ~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~ 758 (1250)
..++.|++||++||+||||||||||||+|+|... +.+|+|.+||.+... ....|-+++++|+..+|.++||.+|+.+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 5788999999999999999999999999999876 458999999998654 3456778999999999999999999987
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 000860 759 SANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 838 (1250)
Q Consensus 759 ~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~ 838 (1250)
+.+-.+ +.+ ++.+++++.++..+||..+.+++.+. |||||||||++||+|+++-+||+||||+|+||+.-+.
T Consensus 95 Gl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCccc-----cCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 753222 233 45567899999999999999999875 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 839 IVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 839 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++...+.++++ ++.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999875 4899999999996 78999999999986 899999986
No 66
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9.7e-40 Score=373.43 Aligned_cols=217 Identities=24% Similarity=0.339 Sum_probs=188.4
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.|+.. .+.+++|+||||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 6899999988421 012469999999999999999999999999999999999876 35899999999864
Q ss_pred cc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 QS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. ..++.+||++|+..+++..||+||+.+..... ..++++.++++.++++.+||.+..|..++ .||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~~-----~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYPS-----NLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCC
Confidence 31 24668999999999999999999999876532 24556677789999999999998888775 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999974 56788999999985 8999
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99886
No 67
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=374.27 Aligned_cols=216 Identities=25% Similarity=0.354 Sum_probs=189.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.+||.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478999998873 12468999999999999999999999999999999999876 4689999999986
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
.. ...++.+|||+|++.++|++||+||+.|....+ ..++.+.+++++++++.++|.+..++.+.. ||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKPRE-----LSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCChhh-----CCHHHH
Confidence 43 223578999999999999999999999986543 245566677899999999999988888754 999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999998765 899999999985 68899999999985 89999998
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
++
T Consensus 219 ~~ 220 (356)
T PRK11650 219 PV 220 (356)
T ss_pred HH
Confidence 63
No 68
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.6e-39 Score=372.98 Aligned_cols=215 Identities=27% Similarity=0.396 Sum_probs=190.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 589999998874 2458999999999999999999999999999999999876 4589999999886
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..++++.+++++++++.++|.+..++.+. .||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~~-----~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYPG-----QLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCChh-----hCCHHHH
Confidence 43 234678999999999999999999999986543 34556677889999999999998888775 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++++||||||+||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999985 68899999999986 79999988
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
++
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 63
No 69
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=371.81 Aligned_cols=215 Identities=26% Similarity=0.414 Sum_probs=190.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.+||.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 589999998873 2458999999999999999999999999999999999876 4589999999886
Q ss_pred Ccc-cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQS-TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~~-~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
... ..++.+|||+|+..++|++||+||+.|....+ ..++++.+++++++++.++|.+..++.+. .||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~~-----~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYVD-----QISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHH
Confidence 542 23578999999999999999999999987543 24556677889999999999998888775 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |+|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999985 68899999999985 78999888
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
++
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 70
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-39 Score=355.59 Aligned_cols=213 Identities=23% Similarity=0.356 Sum_probs=182.3
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5788888773 2358999999999999999999999999999999999876 358999999987543
Q ss_pred ------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 731 ------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 731 ------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
..+++.++|++|++.+++.+||+||+.+...... ..+.++.+++++++++.++|.+..++.++ .|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYPA-----ELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCH
Confidence 2346679999999999999999999988754221 23444556778899999999887777775 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999985 57788999999985 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 8875
No 71
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=329.06 Aligned_cols=217 Identities=27% Similarity=0.390 Sum_probs=190.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+..+|+.++| ++++++++||+.|++||+++++|||||||||.+.++.|... +.+|.|.+||.++
T Consensus 4 ~L~a~~l~K~y-------------~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~di 68 (243)
T COG1137 4 TLVAENLAKSY-------------KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDI 68 (243)
T ss_pred EEEehhhhHhh-------------CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCccc
Confidence 46677777665 35679999999999999999999999999999999999876 3589999999998
Q ss_pred Cccc----ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQST----FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~~~----~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
+... .|.-+||+||++..|..+||+||+......+-. +....+++++++++++.+++.|+++..-.. |||
T Consensus 69 T~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~s-----LSG 142 (243)
T COG1137 69 TKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAYS-----LSG 142 (243)
T ss_pred ccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcccc-----ccc
Confidence 7532 234589999999999999999999877666531 223346667789999999999999987654 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||+-|||||+.+|+.++||||++|+||-+..+|+++++.++++|.-|++|-|... |+...+||.+++.+ |++...
T Consensus 143 GERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~ 220 (243)
T COG1137 143 GERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAE 220 (243)
T ss_pred chHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEec
Confidence 9999999999999999999999999999999999999999999999999999999986 79999999999996 799999
Q ss_pred CCCC
Q 000860 885 GKLG 888 (1250)
Q Consensus 885 g~~~ 888 (1250)
|+++
T Consensus 221 G~p~ 224 (243)
T COG1137 221 GSPE 224 (243)
T ss_pred CCHH
Confidence 9874
No 72
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.8e-40 Score=383.83 Aligned_cols=217 Identities=29% Similarity=0.448 Sum_probs=185.8
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++|+||+|.|+.+ ++.+||+|+||+|+|||.+||+||||+||||+.++|..... +.+|+|.+||.|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 479999999999865 35679999999999999999999999999999999998766 568999999999
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH---HcCCcccccccccCCCCCc
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMS---LVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~---~l~l~~~~~~~v~~~~~~~ 801 (1250)
+++ ..+|++||+|.|||.+|. -||+|||.|+.. +.++++..+.++..-. ..++.+-.||.||+.+. .
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~-q 604 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS-Q 604 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCccccccccCCccc-c
Confidence 764 467899999999999995 699999999753 4455554433332211 23677788999998665 6
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
||||||||++|||||++||+||||||+||+||++++..|++.|.++.+ ++|||+++|+.+ +.+.+|+|+++++ |++
T Consensus 605 LSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G~V 680 (716)
T KOG0058|consen 605 LSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-GRV 680 (716)
T ss_pred ccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-CeE
Confidence 999999999999999999999999999999999999999999988764 699999999974 6899999999985 899
Q ss_pred EEeCCC
Q 000860 882 IYGGKL 887 (1250)
Q Consensus 882 ~~~g~~ 887 (1250)
+..|+.
T Consensus 681 ~E~G~h 686 (716)
T KOG0058|consen 681 VEMGTH 686 (716)
T ss_pred EecccH
Confidence 999974
No 73
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=333.98 Aligned_cols=216 Identities=27% Similarity=0.359 Sum_probs=181.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++.+|+++.++... ...++|+|||++|.+||++||+|+||||||||.++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 588999999886432 12369999999999999999999999999999999999876 3589999999875
Q ss_pred Ccc----cccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000860 729 EQS----TFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~~~ 801 (1250)
... .+++.+.+|+||+ .+.|..||++.|.-+... .+.++.+ +++.++++.+||... .++.+ ..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~P-----~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRRP-----HE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcCc-----hh
Confidence 442 4677899999997 467999999988766543 2333333 348999999999754 44444 35
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||||||++|||||+.+|++|+||||||+||+..+.+|++.|.++.++ +.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999764 789999999975 47889999999986 79
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
++..++.
T Consensus 220 ivE~~~~ 226 (252)
T COG1124 220 IVEIGPT 226 (252)
T ss_pred EEEeech
Confidence 9999886
No 74
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5e-39 Score=370.84 Aligned_cols=215 Identities=25% Similarity=0.368 Sum_probs=189.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeE--EEEEECCc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIE--GDIKISGY 726 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~--G~i~~~g~ 726 (1250)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 478999998874 23589999999999999999999999999999999998763 46 99999998
Q ss_pred cCCc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 727 PKEQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 727 ~~~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
++.. ...++.+|||+|++.++|.+||+||+.|+...+ ..++.+.+++++++++.++|.+..++.+.. ||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~-----LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLPAQ-----LSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCChhh-----CCHH
Confidence 8643 224577999999999999999999999986543 345566677899999999999998888764 9999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC--CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT--GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999998776 799999999985 68889999999985 79999
Q ss_pred eCCCC
Q 000860 884 GGKLG 888 (1250)
Q Consensus 884 ~g~~~ 888 (1250)
.|+++
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 75
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.5e-39 Score=366.81 Aligned_cols=215 Identities=26% Similarity=0.391 Sum_probs=188.7
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3689999999873 3469999999999999999999999999999999999876 358999999998
Q ss_pred CCc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 728 KEQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 728 ~~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
... ...++.+||++|++.+++.+||+|++.+.+.++ ..+..+.+++++++++.++|.+..++.++. ||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~-----LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADARVSD-----LSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhCCChhh-----CCHH
Confidence 643 235678999999999999999999998766543 123344556788899999999988888864 9999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+.+ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999877999999999985 67889999999985 7999999
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 76
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-39 Score=346.27 Aligned_cols=215 Identities=25% Similarity=0.397 Sum_probs=189.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++|+|+. .+.+|+|+|+.+++||.++|+|+||||||||+++|+|..++ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 4789999998853 25799999999999999999999999999999999998773 579999999986
Q ss_pred C----cccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 729 E----QSTFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~----~~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
. ...+++.+|||+|++. .+..-||.|.+.|+..-. ..+.++.+++++++++.+|+.+.+++.+. .||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p~-----~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPPF-----NLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCcc-----ccC
Confidence 5 3457889999999974 455789999999986432 45667789999999999999999888775 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
|||||||+||.+|+.+|++|+|||||||||+..+..+++.++++.++ |+|||+++|+.. .+...+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999877 689999999975 57788999999986 7999
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
+.|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 99985
No 77
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1e-38 Score=368.09 Aligned_cols=217 Identities=26% Similarity=0.387 Sum_probs=188.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+. ++++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 66 (353)
T PRK10851 2 SIEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDV 66 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 478899998773 2458999999999999999999999999999999999876 3579999999986
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
.. ...++.+|||+|++.++|.+||+||+.|....... ...+.++.+++++++++.++|.+..++.+. .|||||
T Consensus 67 ~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgGq 141 (353)
T PRK10851 67 SRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPA-----QLSGGQ 141 (353)
T ss_pred CCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHH
Confidence 43 22356799999999999999999999998653211 123455667789999999999988888775 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++...+|++++|++ |++++.|
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g 219 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAG 219 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999998765 899999999985 68889999999985 7999988
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
++
T Consensus 220 ~~ 221 (353)
T PRK10851 220 TP 221 (353)
T ss_pred CH
Confidence 86
No 78
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-39 Score=347.12 Aligned_cols=210 Identities=30% Similarity=0.444 Sum_probs=178.4
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 5778888763 2458999999999999999999999999999999999876 358999999987643
Q ss_pred -ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 -STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 -~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
...++.++|++|++.+++.+||+||+.+..... ....++.+++++++++.+++.+..++.+.+ ||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYPHE-----LSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcChhh-----CCHHHHHH
Confidence 223567999999998899999999998865432 123344556788999999998887777654 99999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999985 57788999999986 6777654
No 79
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.2e-39 Score=348.08 Aligned_cols=208 Identities=26% Similarity=0.362 Sum_probs=177.3
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. +.+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 678999988742 12359999999999999999999999999999999999866 35899999998753
Q ss_pred cc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 QS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. .+++.++|++|++.+++.+||+||+.+....+ ....++.+++++++++.+++.+..++.++ .||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALPM-----QLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCC
Confidence 21 24567999999999999999999999875532 22334455678999999999888777765 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|.+ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999998777999999999985 56678999999986 44
No 80
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-38 Score=368.47 Aligned_cols=214 Identities=25% Similarity=0.362 Sum_probs=188.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+. ++++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 589999998873 2458999999999999999999999999999999999876 3589999999986
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
.. ...++.+|||+|++.++|++||+||+.|+...+ ..++.+.+++++++++.++|.+..++.+. .||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHH
Confidence 43 234577999999999999999999999986543 23455667788999999999998888875 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++|+|||||||||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|.+ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999985 68899999999985 89999888
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
+
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 81
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=332.39 Aligned_cols=194 Identities=25% Similarity=0.392 Sum_probs=169.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++++|||||||||+||+|.++++|+ +|+|.+||.++.+. .+|+.+|||-|+..+||++||.|||.+-..+.+.
T Consensus 29 f~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w 105 (309)
T COG1125 29 FLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGW 105 (309)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCC
Confidence 46899999999999999999999975 99999999998653 5789999999999999999999999987766553
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
..+. .+.+++++|+.+||+.. ...+++.++|||||+|||.+|
T Consensus 106 ~k~~-----------------------------------i~~r~~ELl~lvgL~p~---~~~~RyP~eLSGGQQQRVGv~ 147 (309)
T COG1125 106 DKER-----------------------------------IKKRADELLDLVGLDPS---EYADRYPHELSGGQQQRVGVA 147 (309)
T ss_pred CHHH-----------------------------------HHHHHHHHHHHhCCCHH---HHhhcCchhcCcchhhHHHHH
Confidence 3210 12247899999999752 122345567999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|||+.+|+|+|+|||+++|||.++.++.+.++++.++.++|+|++ +|+.+|+++++|||.+|++|+++..++|+++..
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfV-THDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFV-THDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEE-ecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 999999999999999999999999999999999988889999987 577999999999999999999999999999864
No 82
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-38 Score=345.53 Aligned_cols=215 Identities=27% Similarity=0.413 Sum_probs=181.7
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++.. .+.+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 578888877421 012469999999999999999999999999999999999865 358999999987642
Q ss_pred ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000860 731 STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRL 810 (1250)
Q Consensus 731 ~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~ 810 (1250)
.++.++|++|++.+++.+||+||+.+....+ ..+.+...+.++++++.+++.+..++.++ .||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQ---GVPKAEARERAEELLELVGLSGFENAYPH-----QLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHH
Confidence 4567999999998888899999998875433 12334445678899999999887777765 4999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeec-CcEEEEeCCC
Q 000860 811 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKR-GGRVIYGGKL 887 (1250)
Q Consensus 811 ~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~-gg~~~~~g~~ 887 (1250)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++...+|++++|++ +|+++..+++
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999864 4899999999985 57788999999984 4888888765
No 83
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=343.61 Aligned_cols=191 Identities=27% Similarity=0.364 Sum_probs=167.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+.+|+|+||||||||++++.++..|+ +|+|.++|.++... ..|+.||+++|+..++...||.||+.|..++
T Consensus 34 I~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei 110 (339)
T COG1135 34 IFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL 110 (339)
T ss_pred EEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence 47899999999999999999999875 99999999887543 3578899999999999999999999999887
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.++. + .+.+|.++|+.+||++..+.... +|||||||||
T Consensus 111 ag~~k~-----------e------------------------i~~RV~elLelVgL~dk~~~yP~-----qLSGGQKQRV 150 (339)
T COG1135 111 AGVPKA-----------E------------------------IKQRVAELLELVGLSDKADRYPA-----QLSGGQKQRV 150 (339)
T ss_pred cCCCHH-----------H------------------------HHHHHHHHHHHcCChhhhccCch-----hcCcchhhHH
Confidence 653211 0 12358889999999998886654 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|+|||+|||||+|||.+...|++.|+++.++.|.|+++++|+ ++-+-+.||||.+|++|++++.|+..++
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHE-m~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHE-MEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEech-HHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 999999999999999999999999999999999999999999999987554 6667779999999999999999999987
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 230 F 230 (339)
T COG1135 230 F 230 (339)
T ss_pred h
Confidence 4
No 84
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-38 Score=343.32 Aligned_cols=209 Identities=24% Similarity=0.440 Sum_probs=179.0
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5788888763 2358999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000860 731 STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRL 810 (1250)
Q Consensus 731 ~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~ 810 (1250)
..++.++|++|++.+++.+||+||+.+....+ ..+..+..+.++++++.+++.+..++.+. .||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLK---GLKKEEARRRIDEWLERLELSEYANKRVE-----ELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHc---CCChHHHHHHHHHHHHHcCChHHHhCcHh-----hCCHHHHHHH
Confidence 34567999999999999999999998876543 22334455678899999999887777664 4999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 811 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 811 ~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
+||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998777899999999975 56778999999985 6777653
No 85
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=366.10 Aligned_cols=215 Identities=25% Similarity=0.397 Sum_probs=188.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 589999998773 2358999999999999999999999999999999999876 4589999999886
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
.. ...++.+|||+|++.++|++||.||+.|+...+ ..++++.+++++++++.++|.+..++.+. .||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~~-----~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKPH-----QLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHH
Confidence 43 235678999999999999999999999986543 23456677889999999999988888775 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999985 68899999999985 79999998
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
++
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 63
No 86
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.6e-38 Score=360.68 Aligned_cols=214 Identities=26% Similarity=0.395 Sum_probs=185.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 588999998873 2458999999999999999999999999999999999875 3589999999875
Q ss_pred Cc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
.. ...++.+||++|++.+++.+||+|++.+..... ..+..+.+++++++++.++|.+..++.++. |||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~-----LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRVAL-----LSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCchhh-----CCHHH
Confidence 32 234677999999999999999999998755432 233444556778899999999888887754 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999985 67788999999985 78999988
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 6
No 87
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-38 Score=345.30 Aligned_cols=213 Identities=28% Similarity=0.386 Sum_probs=182.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecC
Confidence 36788888763 2458999999999999999999999999999999999865 35899999998753
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ...++.++|++|++.+++.+||+|++.+....+ ..+.++.+++++++++.++|.+..++.++. ||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLY---GVPGAERRERIDELLDFVGLLEAADRLVKT-----YSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCChhh-----CCHHHH
Confidence 2 234567999999999999999999998876543 223344556789999999999887877754 999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999998776 899999999985 57788999999985 78888876
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 88
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.3e-38 Score=342.75 Aligned_cols=210 Identities=27% Similarity=0.401 Sum_probs=179.0
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5788888763 2358999999999999999999999999999999999865 358999999987643
Q ss_pred c-cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 S-TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 ~-~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
. ..++.++|++|++.+++.+||+||+.+....+ ....++.+++++++++.+|+.+..+..++. ||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKPKQ-----LSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCChhh-----CCHHHHHH
Confidence 2 23457999999998888999999998875432 233445566788999999998887877754 99999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|.+ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998764 899999999974 57778999999985 7877765
No 89
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=366.59 Aligned_cols=215 Identities=27% Similarity=0.398 Sum_probs=187.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999998873 2458999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
.. ...++.+|||+|++.++|.+||+||+.|....+ ..+.++.+++++++++.++|.+..++.++. ||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~-----LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKPKA-----LSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCChhh-----CCHHHH
Confidence 43 223567999999999999999999999876543 234455667899999999999888887754 999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999985 67889999999985 79999888
Q ss_pred CC
Q 000860 887 LG 888 (1250)
Q Consensus 887 ~~ 888 (1250)
++
T Consensus 218 ~~ 219 (369)
T PRK11000 218 PL 219 (369)
T ss_pred HH
Confidence 63
No 90
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=364.04 Aligned_cols=217 Identities=24% Similarity=0.336 Sum_probs=186.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|++++++.. ..++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 6889999987421 013469999999999999999999999999999999999876 35899999998764
Q ss_pred cc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 QS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. .+++.+||++|++.+++.+||+||+.+..... +.+.++.+++++++++.+||.+..++.++ .||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYPA-----QLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCC
Confidence 31 23567999999999999999999999876543 23445556778999999999988887765 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999985 57788999999985 7899
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98875
No 91
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2e-38 Score=361.35 Aligned_cols=202 Identities=29% Similarity=0.440 Sum_probs=178.2
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCC
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ--STFARISGYVEQEDVHSPQVT 751 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~yv~q~~~~~~~lt 751 (1250)
++++|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999876 358999999987643 234667999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000860 752 IEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 831 (1250)
Q Consensus 752 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsg 831 (1250)
|+||+.+.+.++ +.+..+.+++++++++.++|.+..++.++. ||||||||++||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLY---GLPKDEAEERAEELLELFELGEAADRPVGT-----YSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhCCchhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 999999876653 233445566789999999999888888764 999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 832 LDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 832 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
||+.++..+.+.|++++++|+|||+++|++. ++...||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999985 67789999999985 799998885
No 92
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-38 Score=346.92 Aligned_cols=217 Identities=29% Similarity=0.395 Sum_probs=182.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999998873 2358999999999999999999999999999999999865 3589999999876
Q ss_pred Ccc-cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQS-TFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~~-~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
... ..++.++|++|++.+++.+||+||+.+....+.. ......+..++++++++.++|.+..++.++ .|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPA-----QLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHH
Confidence 432 2345799999999999899999999886543211 001233445678899999999887777765 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999765 899999999985 57788999999985 7888888
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 93
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.7e-38 Score=343.67 Aligned_cols=215 Identities=29% Similarity=0.446 Sum_probs=182.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++.. .+..++|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 5788999877421 012269999999999999999999999999999999999866 35899999998764
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ..+++.++|++|++.+++.+||+||+.+....+ ..+.++..++++++++.+|+.+..++.++. ||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRVGG-----FSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhhhh-----cCHHHH
Confidence 3 234678999999999999999999998765433 233445567789999999998887777654 999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999985 57788999999986 6776653
No 94
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.3e-38 Score=362.49 Aligned_cols=203 Identities=25% Similarity=0.326 Sum_probs=179.6
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcc---cc----cceEEEEcCCCCC
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS---TF----ARISGYVEQEDVH 746 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~~----~~~~~yv~q~~~~ 746 (1250)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|++.+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4568999999999999999999999999999999999876 4589999999986532 22 5689999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000860 747 SPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMD 826 (1250)
Q Consensus 747 ~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 826 (1250)
+|++||+||+.|...+. +.+.++..+++.++++.+||.+..++.++. |||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~-----LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYPDE-----LSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999986543 345566778899999999999888887764 9999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 827 EPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 827 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
|||++||+.++..+++.++++.++ |+|||++||+.. ++...+|++++|.+ |+++..|+++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 999999999999999999998654 899999999975 57889999999985 7999998863
No 95
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.8e-38 Score=357.05 Aligned_cols=213 Identities=24% Similarity=0.421 Sum_probs=186.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++++ ++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~ 66 (301)
T TIGR03522 2 SIRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDV 66 (301)
T ss_pred EEEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 478999998873 2458999999999999999999999999999999999876 4589999999876
Q ss_pred Cc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
.. ...++.+||++|++.+++.+||.|++.+.+.++ +.+.++..++++++++.+||.+..++.++. |||||
T Consensus 67 ~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~ 138 (301)
T TIGR03522 67 LQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIY---GMKGQLLKQRVEEMIELVGLRPEQHKKIGQ-----LSKGY 138 (301)
T ss_pred ccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchHhcCchhh-----CCHHH
Confidence 43 234667999999999999999999999877654 233445566789999999999988888754 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 139 ~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~ 215 (301)
T TIGR03522 139 RQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKK 215 (301)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999865 799999999985 68889999999985 89999998
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 216 ~ 216 (301)
T TIGR03522 216 L 216 (301)
T ss_pred H
Confidence 6
No 96
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.7e-37 Score=374.30 Aligned_cols=216 Identities=30% Similarity=0.473 Sum_probs=181.0
Q ss_pred CCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEE
Q 000860 644 PFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKI 723 (1250)
Q Consensus 644 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~ 723 (1250)
+.....++++|++|.|... +..+|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +..|+|.+
T Consensus 466 ~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 3344579999999998642 3469999999999999999999999999999999999877 46899999
Q ss_pred CCccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHc-------CCccccccc
Q 000860 724 SGYPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLV-------ELDSLRHAL 793 (1250)
Q Consensus 724 ~g~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l-------~l~~~~~~~ 793 (1250)
||.+++. ..+|+++|||+||+.+| +-|++||+.++. | ..+.++. .++++.. .+..-.||.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~----p-~~~~e~i----~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGN----P-EATDEEI----IEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCC----C-CCCHHHH----HHHHHHhCcHHHHHhcccccccc
Confidence 9998653 57899999999999887 569999998753 2 2333333 2233322 344556788
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhccee
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELL 873 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~ 873 (1250)
+|+.+ .+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +|+|+|+++|+++ +.+.+|+|+
T Consensus 603 v~E~G-~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGEGG-ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred cccCC-CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 88754 4799999999999999999999999999999999999999999999985 5899999999985 689999999
Q ss_pred eeecCcEEEEeCCC
Q 000860 874 LMKRGGRVIYGGKL 887 (1250)
Q Consensus 874 ~l~~gg~~~~~g~~ 887 (1250)
+|++ |+++..|+.
T Consensus 679 Vl~~-Gkiv~~gs~ 691 (709)
T COG2274 679 VLDQ-GKIVEQGSH 691 (709)
T ss_pred EccC-CceeccCCH
Confidence 9985 899999996
No 97
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.8e-38 Score=346.50 Aligned_cols=215 Identities=27% Similarity=0.373 Sum_probs=180.7
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 5678887763 2358999999999999999999999999999999999875 358999999987643
Q ss_pred c---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 731 S---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKE-------ISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 731 ~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
. . .++.++|++|++.+++.+||+|++.+......... ....+..++++++++.+|+.+..++.++
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 142 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAG---- 142 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChh----
Confidence 2 1 23568999999999999999999988754321110 0133445678899999999887777765
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |
T Consensus 143 -~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 143 -ELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 49999999999999999999999999999999999999999999998777999999999985 57788999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888875
No 98
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5.9e-38 Score=345.49 Aligned_cols=212 Identities=28% Similarity=0.394 Sum_probs=180.9
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5788888763 2358999999999999999999999999999999999876 357999999987543
Q ss_pred c---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 731 S---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 731 ~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
. . .++.++|++|++.+++.+||+||+.+....+ .....+..++++++++.+++.+..++.++ .|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIR---GLSKKEREEKLEELLEEFHITHLRKSKAS-----SLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHH
Confidence 1 1 2356899999999999999999998865432 12334455678899999999887777765 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999985 68889999999985 78888887
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 99
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.3e-38 Score=343.12 Aligned_cols=209 Identities=30% Similarity=0.435 Sum_probs=174.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++... +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~~~~---------~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGGG---------EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCCC---------cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 35788888774210 11469999999999999999999999999999999999876 35899999998764
Q ss_pred ccc-------ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000860 730 QST-------FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGL 802 (1250)
Q Consensus 730 ~~~-------~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~l 802 (1250)
... .++.++|++|++.+++.+||+|++.+....+ .....+.+++++++++.+||.+..++.++ .|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLA---GVPKKERRERAEELLERVGLGDRLNHYPS-----EL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhcChh-----hc
Confidence 311 2457999999999999999999999876543 12333445678899999999887777765 49
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ ..+|++++|++ |+
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 99999999999999999999999999999999999999999999976 5899999999985 34 48999999986 44
No 100
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=6.2e-38 Score=339.08 Aligned_cols=206 Identities=28% Similarity=0.415 Sum_probs=176.4
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5788888763 2469999999999999999999999999999999999876 458999999987643
Q ss_pred -ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 -STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 -~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
...++.++|++|++.+++.+||+||+.+....+ .. .+++++++++.+++.+..++.++. ||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~----~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLL---GI----RKKRIDEVLDVVGLKDSAKKKVKG-----FSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhc---CC----cHHHHHHHHHHcCCHHHHhhhHhh-----CCHHHHHH
Confidence 234567999999999999999999998875432 11 134578899999998887777654 99999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998777899999999985 56678999999985 7877654
No 101
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.4e-37 Score=340.55 Aligned_cols=221 Identities=35% Similarity=0.640 Sum_probs=182.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-CeeEEEEEECCccC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYPK 728 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~-~~~~G~i~~~g~~~ 728 (1250)
+.|+|+++.++.. +..+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.++
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 5788999877431 0135799999999999999999999999999999999997651 13589999999887
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEE-VMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
....+++.++|++|++.+++.+||+||+.+......+.....+...+++++ .++.+++.+..++.++ .||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVK-----GISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccccc-----CcCHHHH
Confidence 554567789999999999999999999998765433222222223334555 8889999877776664 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|.|+|+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985468899999999985 7887765
No 102
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.5e-38 Score=363.85 Aligned_cols=218 Identities=26% Similarity=0.352 Sum_probs=186.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 478999998873 3469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.+|||+|++.+++.+||+|++.+....... .....++.+++++++++.+++.+..++.+. .|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~-----~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVT-----SLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChh-----hCCH
Confidence 43 34567899999999998999999999876422110 011123445678999999999988888775 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999985 57789999999985 788899
Q ss_pred CCCC
Q 000860 885 GKLG 888 (1250)
Q Consensus 885 g~~~ 888 (1250)
|+++
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9864
No 103
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.8e-38 Score=343.20 Aligned_cols=213 Identities=25% Similarity=0.330 Sum_probs=177.7
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCeeEEEEEECC
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRK-----TGGYIEGDIKISG 725 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~-----~~~~~~G~i~~~g 725 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5788888763 236899999999999999999999999999999999976 4 4689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSF 800 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~ 800 (1250)
.++.. ..+++.++|++|++.++ .+||+||+.+....+. ....++.+++++++++.+|+.+..+..+. ..
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87542 23456799999998887 7999999988754321 11222345678899999999877665530 13
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++. ++...+|++++|.+ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 59999999999999999999999999999999999999999999999776 99999999985 57778999999985 78
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 8888875
No 104
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.8e-38 Score=339.29 Aligned_cols=206 Identities=27% Similarity=0.375 Sum_probs=175.8
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYPG------------GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeCC------------CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 578899887631 2458999999999999999999999999999999999865 35899999998764
Q ss_pred cc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 QS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. .+++.++|++|++.+++.+||+||+.+....+ ....+..+++++++++.+++.+..++.+. .||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVR---GKKEREIQRRVGAALRQVGLEHKADAFPE-----QLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCC
Confidence 31 24567999999999999999999998875432 12334455678899999999877777665 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999985 577789999999853
No 105
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=9.7e-38 Score=340.87 Aligned_cols=214 Identities=26% Similarity=0.407 Sum_probs=181.2
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. .++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 367888887632 12469999999999999999999999999999999999866 35899999998764
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ..+++.++|++|++.+++.+||+||+.+....+ ..+.++..++++++++.++|.+..++.++ .||||||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLK---GLPKSEIKEEVELLLRVLGLTDKANKRAR-----TLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhChhh-----hCCHHHH
Confidence 3 234567999999999888999999998875443 12334445678899999999887777765 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+...+|++++|.+ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 699999999985 46678999999985 788888875
No 106
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-38 Score=321.80 Aligned_cols=214 Identities=28% Similarity=0.398 Sum_probs=182.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++..|. +.++|+|||+++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 3 mL~v~~l~~~YG-------------~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~di 67 (237)
T COG0410 3 MLEVENLSAGYG-------------KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDI 67 (237)
T ss_pred ceeEEeEeeccc-------------ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeec
Confidence 478899987773 4579999999999999999999999999999999999876 3489999999997
Q ss_pred Cc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCC
Q 000860 729 EQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVE-LDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~v~~~~~~~lS 803 (1250)
.. ...++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+- |.+.++++.|+ ||
T Consensus 68 t~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG~-----LS 138 (237)
T COG0410 68 TGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAGT-----LS 138 (237)
T ss_pred CCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCcccC-----CC
Confidence 64 23466799999999999999999999988654421 1122222677887774 67777777775 99
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
|||+|.++|||||+++|++|+|||||.||-|.-..+|.+.|++++++ |.||+++-+... ...+.+||.++|.+ |+++
T Consensus 139 GGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv 216 (237)
T COG0410 139 GGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIV 216 (237)
T ss_pred hHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEE
Confidence 99999999999999999999999999999999999999999999866 779999888764 47789999999985 8999
Q ss_pred EeCCCC
Q 000860 883 YGGKLG 888 (1250)
Q Consensus 883 ~~g~~~ 888 (1250)
+.|+.+
T Consensus 217 ~~G~~~ 222 (237)
T COG0410 217 LSGTAA 222 (237)
T ss_pred EecCHH
Confidence 999964
No 107
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=351.31 Aligned_cols=219 Identities=24% Similarity=0.359 Sum_probs=183.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+... ...+++|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13637 2 SIKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDI 71 (287)
T ss_pred EEEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 378999999874210 012469999999999999999999999999999999999876 3589999999886
Q ss_pred Cc-----ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCC
Q 000860 729 EQ-----STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD--SLRHALVGSPGSF 800 (1250)
Q Consensus 729 ~~-----~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~v~~~~~~ 800 (1250)
.. ...++.+|||+|++. .+...||+|++.|..... +.++++..++++++++.+||. +..++.+.
T Consensus 72 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~----- 143 (287)
T PRK13637 72 TDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSPF----- 143 (287)
T ss_pred CCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCcc-----
Confidence 43 134678999999963 334579999999865432 345566667889999999997 55666654
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++...+|++++|++ |
T Consensus 144 ~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G 221 (287)
T PRK13637 144 ELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-G 221 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 59999999999999999999999999999999999999999999999765 899999999974 56788999999986 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13637 222 KCELQGTP 229 (287)
T ss_pred EEEEECCH
Confidence 88888875
No 108
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=340.18 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=181.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++.. ...+++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 48899999887421 012469999999999999999999999999999999999865 4589999999876
Q ss_pred Cccc------c-cceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 729 EQST------F-ARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~~~------~-~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
.... . ++.++|++|++.+++.+||+||+.+..... ....++.+++++++++.+||.+..++.+. .
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRPS-----E 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----h
Confidence 4311 2 256999999998899999999999875432 22334455678999999999887777664 4
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ ..+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 34 45689999975 78
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 8888774
No 109
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=343.70 Aligned_cols=217 Identities=26% Similarity=0.361 Sum_probs=182.8
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++.. .+.+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5788998876421 011369999999999999999999999999999999999876 35799999998764
Q ss_pred cc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 QS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. ..++.++|++|++.+++.+|++||+.+....+ .....+..+.++++++.+++.+..++.+. .||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIA---GVPKAEIEERVLELLELVGLEDKADAYPA-----QLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhcChh-----hCC
Confidence 31 23567999999999999999999998875433 12334455678899999999887777664 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999975 56778999999985 7888
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
..|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 110
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-37 Score=338.57 Aligned_cols=206 Identities=26% Similarity=0.378 Sum_probs=175.3
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYPN------------GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeCC------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 57888887631 2468999999999999999999999999999999999865 358999999987542
Q ss_pred ------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 731 ------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 731 ------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
..+++.++|++|++.+++.+|++||+.+....+ ..+.++..++++++++.+++.+..++.++ .|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVT---GVPPREIRKRVPAALELVGLSHKHRALPA-----ELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCChh-----hcCH
Confidence 124567999999999999999999998875432 12344455678899999999887777765 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999998777999999999984 56678999999985 54
No 111
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=350.97 Aligned_cols=217 Identities=25% Similarity=0.354 Sum_probs=181.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.|+... ...+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 68999999885210 012359999999999999999999999999999999999876 35899999998863
Q ss_pred c-------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 730 Q-------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 730 ~-------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
. ..+++.+|||+|++ .++ ..||.|++.|..... +.+.++.++++.++++.++|. +..++.+.
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~---- 143 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSPF---- 143 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCcc----
Confidence 1 23467899999986 444 469999999875432 234556677889999999996 45666554
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++...+|++++|++ |
T Consensus 144 -~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 144 -ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred -cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 59999999999999999999999999999999999999999999999877999999999984 57788999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|++
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999986
No 112
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2e-37 Score=342.84 Aligned_cols=214 Identities=25% Similarity=0.395 Sum_probs=182.4
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 57889988763 2458999999999999999999999999999999999865 45899999998764
Q ss_pred c-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 730 Q-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 730 ~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
. ..+++.++|++|++.+++.+||+||+.+..... .....++.++++.++++.+|+.+..+..+. .|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV--RGASKEEAEKQARELLAKVGLAERAHHYPS-----ELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCChHHHhcChh-----hcCH
Confidence 2 234567999999998899999999998764211 122344456678899999999887777664 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999777999999999985 56678999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 113
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=345.72 Aligned_cols=216 Identities=26% Similarity=0.331 Sum_probs=178.7
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 57788877631 1468999999999999999999999999999999999865 357999999987643
Q ss_pred ------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 731 ------STFARISGYVEQEDVHSPQVTIEESLWFSANLRL-----PKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 731 ------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
...++.++|++|++.+++.+||+||+.+...... ......+...++++++++.+++.+..++.+.
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 143 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRAD---- 143 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcc----
Confidence 1245679999999999999999999987532110 0011122345668889999999877777664
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+
T Consensus 144 -~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 144 -QLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 49999999999999999999999999999999999999999999998764 899999999985 57779999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 788888875
No 114
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=343.47 Aligned_cols=212 Identities=28% Similarity=0.393 Sum_probs=180.8
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67889998763 2358999999999999999999999999999999999865 35799999998764
Q ss_pred cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 730 QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 730 ~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
. .++.++|++|++.+++.+||+||+.+....+ .....+.+++++++++.++|.+..++.++ .||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYIW-----QLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHH
Confidence 3 2345899999998899999999998765432 22344455678999999999887777664 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeec-CcEEEEeCCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKR-GGRVIYGGKL 887 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~-gg~~~~~g~~ 887 (1250)
++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++...+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999985 57788999999984 5888888765
No 115
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.8e-38 Score=337.30 Aligned_cols=191 Identities=29% Similarity=0.412 Sum_probs=163.7
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCC-CCCCCCHH
Q 000860 675 LQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDV-HSPQVTIE 753 (1250)
Q Consensus 675 ~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~-~~~~ltv~ 753 (1250)
+++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.....++.++|++|++. .++.+||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 468999999999999999999999999999999999876 458999999988654445667999999974 34467999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000860 754 ESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 833 (1250)
Q Consensus 754 e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD 833 (1250)
||+.+..... .. ..++++++++.++|.+..++.++ .||||||||++|||+|+.+|++++|||||+|||
T Consensus 91 e~l~~~~~~~-----~~--~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL-----DA--GNEQAETVLKDLDLYALKERHPL-----SLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc-----Cc--cHHHHHHHHHHcCCchhcCCCch-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998764321 11 12457899999999988887775 499999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 834 ARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 834 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999777999999999985 56678999999986 565
No 116
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.4e-38 Score=319.84 Aligned_cols=213 Identities=24% Similarity=0.433 Sum_probs=195.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+++++|++++ +++++++|+||.++||++++++|||||||||++++|.|... +.+|.|.++|.++
T Consensus 2 ~L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~ 66 (300)
T COG4152 2 ALEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPL 66 (300)
T ss_pred ceEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcch
Confidence 46788888766 35679999999999999999999999999999999999887 4589999999998
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
+. ..+.+|||+|.+.-++|.+||.|.|.|-+.|+ ++++++.++.++.+++.+++......++.+ ||.|++|
T Consensus 67 ~~-~~~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kIk~-----LSKGnqQ 137 (300)
T COG4152 67 SQ-EIKNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKIKE-----LSKGNQQ 137 (300)
T ss_pred hh-hhhhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchHHH-----hhhhhhH
Confidence 65 34667999999999999999999999999987 678888999999999999999988888854 9999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++.+-.+++.+|++++||||+|||||.+.+.+-+.+.++++.|.|||+++|+.. .+-++||++++|.+ |+.+.+|+.
T Consensus 138 KIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 138 KIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999999999999999999999999999985 68999999999985 788888987
No 117
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=343.07 Aligned_cols=213 Identities=28% Similarity=0.416 Sum_probs=180.4
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 57888887631 1458999999999999999999999999999999999876 357999999987542
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCHH
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS--LRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~v~~~~~~~lSgG 805 (1250)
...++.++|++|++.+++.+||+||+.+...++ ..+.++..+.++++++.+++.+ ..++.+. .||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~-----~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYPH-----ELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcChh-----hCCHH
Confidence 234567999999999999999999998875442 2234445567889999999985 5666554 49999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999985 57788999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 118
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.5e-37 Score=344.43 Aligned_cols=215 Identities=25% Similarity=0.350 Sum_probs=182.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (250)
T PRK11264 3 AIEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITI 67 (250)
T ss_pred cEEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEc
Confidence 478999998773 2358999999999999999999999999999999999865 3579999999875
Q ss_pred Cc-----------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000860 729 EQ-----------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSP 797 (1250)
Q Consensus 729 ~~-----------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~ 797 (1250)
.. ...++.++|++|++.+++.+||+||+.+...... ....++..++++++++.+|+.+..++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-- 143 (250)
T PRK11264 68 DTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYPR-- 143 (250)
T ss_pred cccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCChh--
Confidence 42 1245679999999999999999999987543111 12334455678899999999887777664
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++
T Consensus 144 ---~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~ 219 (250)
T PRK11264 144 ---RLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ 219 (250)
T ss_pred ---hCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC
Confidence 49999999999999999999999999999999999999999999999877999999999975 57788999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 220 -G~i~~~~~~ 228 (250)
T PRK11264 220 -GRIVEQGPA 228 (250)
T ss_pred -CEEEEeCCH
Confidence 788888875
No 119
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-37 Score=348.47 Aligned_cols=202 Identities=24% Similarity=0.317 Sum_probs=173.9
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcc---c----ccceEEEEcCCCCC
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS---T----FARISGYVEQEDVH 746 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~yv~q~~~~ 746 (1250)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 113 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFAL 113 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCccc
Confidence 4578999999999999999999999999999999999876 3579999999875421 1 13579999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000860 747 SPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMD 826 (1250)
Q Consensus 747 ~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 826 (1250)
++.+||+||+.+..... .....+..++++++++.++|.+..++.++. ||||||||++|||||+.+|++|+||
T Consensus 114 ~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Gq~qrv~lAral~~~p~illLD 185 (269)
T cd03294 114 LPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYPDE-----LSGGMQQRVGLARALAVDPDILLMD 185 (269)
T ss_pred CCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999998875432 123344556788999999999888887754 9999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 827 EPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 827 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++++.|+.
T Consensus 186 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 186 EAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999998754 899999999975 57788999999985 788888875
No 120
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.7e-38 Score=307.59 Aligned_cols=191 Identities=28% Similarity=0.412 Sum_probs=166.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
++||+||||||||||||+|+|+..|. +|+|++||.+..... ..|.++.++|++.+|..+||.+|+.+|..-
T Consensus 27 ~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P----- 98 (231)
T COG3840 27 IVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSP----- 98 (231)
T ss_pred EEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCCc-----
Confidence 58999999999999999999999864 999999999986554 467899999999999999999999876421
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.. .++..+ +++++.++..+||..+.+...+. |||||||||++||+
T Consensus 99 ~L-----kL~a~~-------------------------r~~v~~aa~~vGl~~~~~RLP~~-----LSGGqRQRvALARc 143 (231)
T COG3840 99 GL-----KLNAEQ-------------------------REKVEAAAAQVGLAGFLKRLPGE-----LSGGQRQRVALARC 143 (231)
T ss_pred cc-----ccCHHH-------------------------HHHHHHHHHHhChhhHhhhCccc-----cCchHHHHHHHHHH
Confidence 10 011111 12478899999999998888776 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+++-+||+||||+|+|||.-+.++...+.+++.+.+.|+++++|| .+++.+.+|+++++++|+|.++|+.++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~-~~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHH-PEDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCC-HHHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 9999999999999999999999999999999999889999998666 57889999999999999999999998864
No 121
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=351.38 Aligned_cols=218 Identities=26% Similarity=0.375 Sum_probs=181.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+... ...+++|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999999885311 012469999999999999999999999999999999999876 3589999999775
Q ss_pred Cc-------------------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc
Q 000860 729 EQ-------------------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD 787 (1250)
Q Consensus 729 ~~-------------------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~ 787 (1250)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999996 3554 59999998875321 234555567788999999996
Q ss_pred -ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHH
Q 000860 788 -SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIF 866 (1250)
Q Consensus 788 -~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 866 (1250)
+..++.+. .||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~~~-----~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERSPF-----GLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 55665553 59999999999999999999999999999999999999999999998777999999999975 467
Q ss_pred HhhcceeeeecCcEEEEeCCC
Q 000860 867 EAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 867 ~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
..+|++++|.+ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 799999886
No 122
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-37 Score=350.46 Aligned_cols=219 Identities=26% Similarity=0.352 Sum_probs=182.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++... .....+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~ 71 (305)
T PRK13651 2 QIKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDE 71 (305)
T ss_pred EEEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceec
Confidence 378999999885311 0123589999999999999999999999999999999998763 479999988653
Q ss_pred C---------------------------cccccceEEEEcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 000860 729 E---------------------------QSTFARISGYVEQED-VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEV 780 (1250)
Q Consensus 729 ~---------------------------~~~~~~~~~yv~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~ 780 (1250)
. ....++.+|||+|++ ..+...||+|++.|..... ..+.++..++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~ 148 (305)
T PRK13651 72 KNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKY 148 (305)
T ss_pred ccccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHH
Confidence 1 123466799999985 3344579999999875432 34556667789999
Q ss_pred HHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEec
Q 000860 781 MSLVELD-SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIH 859 (1250)
Q Consensus 781 l~~l~l~-~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 859 (1250)
++.+||. +..++.+. .||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|
T Consensus 149 l~~~gL~~~~~~~~~~-----~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtH 223 (305)
T PRK13651 149 IELVGLDESYLQRSPF-----ELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTH 223 (305)
T ss_pred HHHcCCChhhhhCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEee
Confidence 9999996 66777665 49999999999999999999999999999999999999999999999877999999999
Q ss_pred CCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 860 QPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 860 ~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++. ++.+.+|++++|++ |++++.|++
T Consensus 224 d~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 224 DLD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred CHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 974 57789999999985 789999886
No 123
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=346.61 Aligned_cols=215 Identities=27% Similarity=0.348 Sum_probs=182.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4789999988741 2358999999999999999999999999999999999876 3589999999876
Q ss_pred Cc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.+||++|++. .++..||.||+.|..... ..+.++.+++++++++.++|.+..++.+. .|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPPY-----HLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCChh-----hCCH
Confidence 43 234567999999963 445689999998864321 23444556678999999999888888775 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999975 46688999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 885
No 124
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-37 Score=349.75 Aligned_cols=218 Identities=24% Similarity=0.327 Sum_probs=181.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.|+... ...+++|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 78999999885311 012469999999999999999999999999999999999876 35799999998763
Q ss_pred c-------ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000860 730 Q-------STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSF 800 (1250)
Q Consensus 730 ~-------~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~ 800 (1250)
. ..+++.+|||+|++. .+...||+||+.|..... ..+.++.+++++++++.++|. +..++.+.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~----- 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSPF----- 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCcc-----
Confidence 1 234567999999862 233579999999875432 234555567789999999996 56676664
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|.+ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 49999999999999999999999999999999999999999999999764 899999999985 57788999999985 8
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999875
No 125
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2e-37 Score=339.07 Aligned_cols=211 Identities=30% Similarity=0.445 Sum_probs=176.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcC
Confidence 35788887663 2358999999999999999999999999999999999876 35799999998754
Q ss_pred cc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCH
Q 000860 730 QS---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLV-ELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 730 ~~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. . .++.++|++|++.+++.+|++||+.+...... ..+.+++++++++.+ ++.+..++.+. .|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~-----~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLAG-----TLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCchh-----hCCH
Confidence 31 1 24569999999999999999999988754321 123345567788887 57766666664 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|.+ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999777899999999975 57788999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 874
No 126
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-37 Score=335.28 Aligned_cols=209 Identities=31% Similarity=0.481 Sum_probs=176.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccc
Confidence 36788888763 235899999999999 999999999999999999999866 35899999998754
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ..+++.++|++|++.+++.+||+||+.+....+ ..+.++.++.++++++.+++.+..++.++ .||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLK---GIPSKEVKARVDEVLELVNLGDRAKKKIG-----SLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHCCCHHHHhCchh-----hCCHHHH
Confidence 3 234567999999999999999999998865543 12333445678899999999887777765 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999876 599999999985 46678999999986 6777654
No 127
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.4e-37 Score=345.02 Aligned_cols=217 Identities=24% Similarity=0.306 Sum_probs=179.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.+.. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYPN------------GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecCC------------CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 578888877631 2458999999999999999999999999999999999876 35899999998754
Q ss_pred c------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000860 730 Q------STFARISGYVEQEDVHSPQVTIEESLWFSANLRL-----PKEISKDQRHEFVEEVMSLVELDSLRHALVGSPG 798 (1250)
Q Consensus 730 ~------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~ 798 (1250)
. ..+++.++|++|++.+++.+||+||+.+...... ......++.+++++++++.+++.+..+..+.
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 144 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRAD--- 144 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcc---
Confidence 2 1245679999999999999999999976421100 0011123345678899999999887777664
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++
T Consensus 145 --~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 145 --QLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred --cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 49999999999999999999999999999999999999999999998654 899999999985 46788999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 788888875
No 128
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.8e-38 Score=339.33 Aligned_cols=195 Identities=30% Similarity=0.441 Sum_probs=167.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||||+|+|.++|. +|+|.++|+++.+. +..+.++||||.....+.+||+|-+.+|..-+.
T Consensus 30 i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~- 105 (258)
T COG1120 30 ITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHL- 105 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCccc-
Confidence 58999999999999999999999865 99999999998643 567899999999888889999999988743210
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
.... .. ..+.++.++++|+.+|+.+.++..+.+ |||||||||.||
T Consensus 106 --~~~~---~~-------------------------~~~D~~~v~~aL~~~~~~~la~r~~~~-----LSGGerQrv~iA 150 (258)
T COG1120 106 --GLFG---RP-------------------------SKEDEEIVEEALELLGLEHLADRPVDE-----LSGGERQRVLIA 150 (258)
T ss_pred --cccc---CC-------------------------CHhHHHHHHHHHHHhCcHHHhcCcccc-----cChhHHHHHHHH
Confidence 0000 00 001112478899999999999988866 999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||+++|+||+||||||+||...+.++++.+++++++.|.|+|+++ |+.+.+.++||++++|++|+++.+|+++++.
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vl-HDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVL-HDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 9999999999999999999999999999999999988899999875 5678999999999999999999999998875
No 129
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.5e-37 Score=344.86 Aligned_cols=215 Identities=20% Similarity=0.308 Sum_probs=182.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 589999998773 2458999999999999999999999999999999999876 3589999999875
Q ss_pred Ccc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000860 729 EQS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGL 802 (1250)
Q Consensus 729 ~~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~l 802 (1250)
... ..++.++|++|++.+++.+||.||+.+...... ..+.++.++++.++++.+++.+..++.++. |
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMPSE-----L 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCChhh-----C
Confidence 421 235679999999989999999999987643211 123344456788899999999888877754 9
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999974 57788999999985 789
Q ss_pred EEeCCC
Q 000860 882 IYGGKL 887 (1250)
Q Consensus 882 ~~~g~~ 887 (1250)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 888875
No 130
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.4e-37 Score=335.80 Aligned_cols=209 Identities=24% Similarity=0.293 Sum_probs=177.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYLG------------GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEecC------------CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 578899987731 2368999999999999999999999999999999999876 35899999998754
Q ss_pred c---c---cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 Q---S---TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~---~---~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
. . .+++.++|++|++.+++.+|++||+.+....+ ..+.++..+.++++++.+++.+..++.++ .||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFPI-----QLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCch-----hCC
Confidence 2 1 24567999999998888999999998865432 23344455678889999999887777664 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++...+|++++|++ |+++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999999999999999999999999999777899999999985 56678999999986 6653
No 131
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.2e-37 Score=351.22 Aligned_cols=229 Identities=22% Similarity=0.264 Sum_probs=186.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++||++.++............+..++|+|||++|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 589999999885321100000011235699999999999999999999999999999999998763 579999999886
Q ss_pred Ccc------cccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQS------TFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~~------~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
... .+++.++||+|++ .++|.+||.|++.+......+ ..++++.+++++++++.++|. +..++.+.
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~---- 160 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRYPH---- 160 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCCcc----
Confidence 431 2456799999997 588899999999886543211 245566677889999999994 45566554
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|+|++||++. .+...+|++++|.+
T Consensus 161 -~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 161 -EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 59999999999999999999999999999999999999999999999764 899999999975 46678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799998885
No 132
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-38 Score=322.76 Aligned_cols=218 Identities=25% Similarity=0.364 Sum_probs=189.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++.+++++++. ..++++|||+++++||+++|+||||||||||+|+|+|..+ +.+|+|.++|.++
T Consensus 4 lL~v~~l~k~FG-------------Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~i 68 (250)
T COG0411 4 LLEVRGLSKRFG-------------GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDI 68 (250)
T ss_pred eeeeccceeecC-------------CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCccc
Confidence 467788887663 4578999999999999999999999999999999999877 4589999999987
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcC--------CCCC-CCHHHHHHHHHHHHHHcCCccccccccc
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLR--------LPKE-ISKDQRHEFVEEVMSLVELDSLRHALVG 795 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~--------~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~v~ 795 (1250)
... ..+.-++--+|...+|+++||.||+..++..+ .+.. ...++..+++.++++.+||.+.+|...|
T Consensus 69 t~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~ 148 (250)
T COG0411 69 TGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG 148 (250)
T ss_pred CCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh
Confidence 642 23445788899999999999999999886533 1111 1345667888999999999999999998
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceee
Q 000860 796 SPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLL 874 (1250)
Q Consensus 796 ~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~ 874 (1250)
+ ||+||+||+.|||||+++|++|+||||.+||.+....++.+.|+++.++ |.||+++-|+.+ -++.+||||+|
T Consensus 149 ~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~V 222 (250)
T COG0411 149 N-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVV 222 (250)
T ss_pred c-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEe
Confidence 6 9999999999999999999999999999999999999999999999874 699999999986 48999999999
Q ss_pred eecCcEEEEeCCCC
Q 000860 875 MKRGGRVIYGGKLG 888 (1250)
Q Consensus 875 l~~gg~~~~~g~~~ 888 (1250)
|+. |+++..|+++
T Consensus 223 l~~-G~~IAeG~P~ 235 (250)
T COG0411 223 LNY-GEVIAEGTPE 235 (250)
T ss_pred ccC-CcCcccCCHH
Confidence 985 7999999874
No 133
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=350.09 Aligned_cols=191 Identities=27% Similarity=0.420 Sum_probs=169.9
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccc-cceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQV-QRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
++|+|||||||||||++|+|+.+|+ +|+|.++|.++++..+ +|.+|+|+|+..++|++||+|||.|+++.++....
T Consensus 32 ~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ 108 (338)
T COG3839 32 VVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKA 108 (338)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCchH
Confidence 6899999999999999999999865 9999999999987654 67899999999999999999999999887654221
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
+ .+.+++++.+.|+|++..|.+.. +|||||||||+|||||
T Consensus 109 ---------------------e--------------i~~rV~eva~~L~l~~lL~r~P~-----~LSGGQrQRVAlaRAl 148 (338)
T COG3839 109 ---------------------E--------------IDKRVKEVAKLLGLEHLLNRKPL-----QLSGGQRQRVALARAL 148 (338)
T ss_pred ---------------------H--------------HHHHHHHHHHHcCChhHHhcCcc-----cCChhhHHHHHHHHHH
Confidence 1 12358889999999999998765 4999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
+++|+++|||||+|+||+..+.++...|+++.++.+.|+|.+ +|+..|+..++|||++|++|++...|++.++.+
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYV-THDq~EAmtladri~Vm~~G~i~Q~g~p~ely~ 223 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYV-THDQVEAMTLADRIVVMNDGRIQQVGTPLELYE 223 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEE-cCCHHHHHhhCCEEEEEeCCeeeecCChHHHhh
Confidence 999999999999999999999999999999888778787776 567889999999999999999999999999843
No 134
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=310.41 Aligned_cols=215 Identities=26% Similarity=0.413 Sum_probs=182.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++.+|++|+.. .+.+|++||++++|||++||+||||||||||||+|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 57789998764 45799999999999999999999999999999999998763 4799999999865
Q ss_pred c---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 730 Q---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEI--SKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 730 ~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~--~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
. ....+..+..||+..+-...||+|-+.++.. |... ...+..+.++++++..++.+.+.+..- .|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~---p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~-----~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRI---PHRSGREPEEDERIAAQALAATDLSGLAGRDYR-----TLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccc---ccccCCCchhhHHHHHHHHHHcChhhhhccchh-----hcCc
Confidence 4 3445667889999888667899999998753 3322 223455668899999999998877664 4999
Q ss_pred HHHHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 805 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 805 Gerqr~~ia~~l~~------~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||||||.+||.|+. ++++||||||||+||...+..++++.|+++++|..|+++.||.+. ....+|+|++|.+
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~- 216 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ- 216 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-
Confidence 99999999999986 356999999999999999999999999999999999999999974 6788999999985
Q ss_pred cEEEEeCCCCc
Q 000860 879 GRVIYGGKLGV 889 (1250)
Q Consensus 879 g~~~~~g~~~~ 889 (1250)
|+++..|++..
T Consensus 217 Grv~a~g~p~~ 227 (259)
T COG4559 217 GRVIASGSPQD 227 (259)
T ss_pred CeEeecCCHHH
Confidence 89999998753
No 135
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-36 Score=376.71 Aligned_cols=220 Identities=29% Similarity=0.435 Sum_probs=183.1
Q ss_pred CCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECC
Q 000860 646 HPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISG 725 (1250)
Q Consensus 646 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g 725 (1250)
....++|+|+.|+|+.+ ++.+||+|+|+.|++||.+||+|||||||||++++|.+... |.+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsR----------pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSR----------PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCC----------CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcC
Confidence 34579999999999764 35679999999999999999999999999999999999776 5689999999
Q ss_pred ccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHH---HHHcCCcccccccccCCCC
Q 000860 726 YPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEV---MSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 726 ~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~---l~~l~l~~~~~~~v~~~~~ 799 (1250)
.++.. +.+|.++|.|.|+|++| ..||+||+.|+. .+.+.++..+..+.+ --...|.+-.||.+|+.+.
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----CcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 98754 56788999999999887 579999998862 133444333322211 1123466677899998665
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||||++||+||+||||||+||+++++.+++.|++.. .|+|.|+++|+.+ ..+.+|+|++|++ |
T Consensus 489 -qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS--tIrnaD~I~v~~~-G 563 (1228)
T KOG0055|consen 489 -QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS--TIRNADKIAVMEE-G 563 (1228)
T ss_pred -CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh--hhhccCEEEEEEC-C
Confidence 499999999999999999999999999999999999999999998764 6999999999975 4567999999986 8
Q ss_pred EEEEeCCCC
Q 000860 880 RVIYGGKLG 888 (1250)
Q Consensus 880 ~~~~~g~~~ 888 (1250)
++++.|+.+
T Consensus 564 ~IvE~G~h~ 572 (1228)
T KOG0055|consen 564 KIVEQGTHD 572 (1228)
T ss_pred EEEEecCHH
Confidence 999999874
No 136
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.7e-37 Score=335.73 Aligned_cols=211 Identities=25% Similarity=0.357 Sum_probs=174.6
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++.. .+.+++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5788998877421 012469999999999999999999999999999999999876 35899999998754
Q ss_pred cc---c---cc-ceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000860 730 QS---T---FA-RISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGL 802 (1250)
Q Consensus 730 ~~---~---~~-~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~l 802 (1250)
.. . ++ +.++|++|++.+++.+||+||+.+....+ .....+..+++.++++.+|+.+..++.++ .|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIG---KKSVKEAKERAYEMLEKVGLEHRINHRPS-----EL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hC
Confidence 31 1 22 56999999998888999999998865432 12233445668899999999887777665 49
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+ ..+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998764 899999999985 34 56899999986 665
Q ss_pred E
Q 000860 882 I 882 (1250)
Q Consensus 882 ~ 882 (1250)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 3
No 137
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-37 Score=347.78 Aligned_cols=218 Identities=23% Similarity=0.358 Sum_probs=181.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+... ...+++|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 478999999885211 012469999999999999999999999999999999999876 3579999999876
Q ss_pred Cc-------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000860 729 EQ-------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~-------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~ 798 (1250)
.. ..+++.+|||+|++ .+++ .||.||+.|..... ..+.++..++++++++.+||. +..++.+.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~--- 144 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSPF--- 144 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCcc---
Confidence 32 23567899999986 3454 59999999875332 234556667789999999996 56666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+.+|++++|++
T Consensus 145 --~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 145 --QMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred --cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 4999999999999999999999999999999999999999999999875 4899999999975 57788999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 788888875
No 138
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-37 Score=356.73 Aligned_cols=213 Identities=28% Similarity=0.476 Sum_probs=179.4
Q ss_pred CeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCc
Q 000860 647 PLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 726 (1250)
Q Consensus 647 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~ 726 (1250)
++.++.+|+++.|+. ++++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng~ 383 (559)
T COG4988 318 PIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNGI 383 (559)
T ss_pred CceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCc
Confidence 456777899998853 23789999999999999999999999999999999998873 5899999998
Q ss_pred cCC---cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc------ccccccCC
Q 000860 727 PKE---QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL------RHALVGSP 797 (1250)
Q Consensus 727 ~~~---~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~------~~~~v~~~ 797 (1250)
+.. ...++++++||+|++.+++ -|++||+.++.. +.++++ +.++++..+|.+. .|+.+|+
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~~-----~~s~e~----i~~al~~a~l~~~v~~p~GLdt~ige- 452 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLARP-----DASDEE----IIAALDQAGLLEFVPKPDGLDTVIGE- 452 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccCC-----cCCHHH----HHHHHHHhcHHHhhcCCCcccchhcc-
Confidence 754 4578999999999999886 499999987631 234443 5566666666544 4566765
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
++++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++ +....+|+|++|++
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl--~~~~~~D~I~vld~ 529 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRL--EDAADADRIVVLDN 529 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcCh--HHHhcCCEEEEecC
Confidence 4468999999999999999999999999999999999999999999999976 59999999997 45678999999985
Q ss_pred CcEEEEeCCCC
Q 000860 878 GGRVIYGGKLG 888 (1250)
Q Consensus 878 gg~~~~~g~~~ 888 (1250)
|+++..|..+
T Consensus 530 -G~l~~~g~~~ 539 (559)
T COG4988 530 -GRLVEQGTHE 539 (559)
T ss_pred -CceeccCCHH
Confidence 8999998863
No 139
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.6e-38 Score=353.14 Aligned_cols=210 Identities=26% Similarity=0.411 Sum_probs=177.1
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++|+|++++|.. +++||+++||+|++||.+||+|+|||||||++|+|.+... .+|+|.+||++
T Consensus 350 ~~I~F~dV~f~y~~------------k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~d 414 (591)
T KOG0057|consen 350 GSIEFDDVHFSYGP------------KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQD 414 (591)
T ss_pred CcEEEEeeEEEeCC------------CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCee
Confidence 35999999999852 4569999999999999999999999999999999998664 47999999998
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCC-------cccccccccCC
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVEL-------DSLRHALVGSP 797 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l-------~~~~~~~v~~~ 797 (1250)
+++ +.+|+.|||||||..+| +.||.+|+.|+.. ..+.++ |-++.+..++ .+-.+|.+|+.
T Consensus 415 ik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~-----sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VGer 484 (591)
T KOG0057|consen 415 IKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNP-----SASDEE----VVEACKRAGLHDVISRLPDGYQTLVGER 484 (591)
T ss_pred HhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCC-----CcCHHH----HHHHHHHcCcHHHHHhccccchhhHhhc
Confidence 654 56889999999998887 5699999998731 234433 3444445444 44556778875
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
+. -|||||||||+||||++.||+|+++|||||.||++++.++++.+++. ..|+|+|++.|+. ++...||+|++|++
T Consensus 485 G~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~n 560 (591)
T KOG0057|consen 485 GL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLDN 560 (591)
T ss_pred cc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEEC
Confidence 54 49999999999999999999999999999999999999999999984 4699999999996 57899999999986
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|++...|+.
T Consensus 561 -G~v~e~gth 569 (591)
T KOG0057|consen 561 -GTVKEYGTH 569 (591)
T ss_pred -CeeEEeccH
Confidence 788888886
No 140
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=346.86 Aligned_cols=216 Identities=25% Similarity=0.347 Sum_probs=184.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++.. ..+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 47899999987421 12358999999999999999999999999999999999876 3589999999886
Q ss_pred Cc---ccccceEEEEcCCC-CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQED-VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~-~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.+||++|++ ..++..||+||+.|..... +.+.++..++++++++.+||.+..+..++ .|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREPA-----RLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCH
Confidence 43 23456799999997 3677889999998875432 34455566778999999999988887775 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|.+ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999975 34 67999999985 79988
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8885
No 141
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-37 Score=299.77 Aligned_cols=213 Identities=27% Similarity=0.400 Sum_probs=180.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++.+++++.+... ..+..||++|++.|++||.+||+|||||||||||-+|+|... +.+|+|.+.|++.
T Consensus 6 ii~~~~l~ktvg~~---------~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L 74 (228)
T COG4181 6 IIEVHHLSKTVGQG---------EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPL 74 (228)
T ss_pred eeehhhhhhhhcCC---------CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcch
Confidence 36777777665432 246789999999999999999999999999999999999876 4589999999986
Q ss_pred Cc------cc-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 729 EQ------ST-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~------~~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
.. .. ..+.+|+|+|...+.|++|..||+.....++-. +..+..+...+.++.+||.+..+..++ +
T Consensus 75 ~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge---~~~~~~~~A~~lL~~vGLg~Rl~HyP~-----q 146 (228)
T COG4181 75 HKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLELRGE---SSADSRAGAKALLEAVGLGKRLTHYPA-----Q 146 (228)
T ss_pred hhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhhcCC---ccccHHHHHHHHHHHhCcccccccCcc-----c
Confidence 43 12 346799999999999999999999988877642 233445567889999999988877765 4
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
|||||+|||+||||++..|+|||.||||-+||..+...|.+.|-.+.+ .|.|.|++||||. +...|||.+-|.+ |+
T Consensus 147 LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~ 223 (228)
T COG4181 147 LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GR 223 (228)
T ss_pred cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ce
Confidence 999999999999999999999999999999999999999999988754 5999999999984 6789999999986 67
Q ss_pred EEE
Q 000860 881 VIY 883 (1250)
Q Consensus 881 ~~~ 883 (1250)
++.
T Consensus 224 l~~ 226 (228)
T COG4181 224 LVE 226 (228)
T ss_pred ecc
Confidence 653
No 142
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.7e-37 Score=335.71 Aligned_cols=206 Identities=26% Similarity=0.371 Sum_probs=175.1
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++.+|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 5788888763 2358999999999999999999999999999999999875 358999999987632
Q ss_pred -----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 731 -----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 731 -----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
..+++.++|++|++.+++.+|++||+.+..... .....++.+++++++++.+|+.+..++.+. .||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKV--KGMSKAEAEERALELLEKVGLADKADAYPA-----QLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCCHhHhhhCcc-----ccCHH
Confidence 234678999999999999999999998864311 122344455678899999999887777765 49999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877899999999985 57788999999986 44
No 143
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7e-37 Score=337.37 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=179.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 57888888763 2358999999999999999999999999999999999875 35899999998754
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ...++.++|++|++.+++.+|++||+.+....+ ..+.++..+.++++++.+||.+..++.++ .||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKVR-----ELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHH
Confidence 2 122357999999998888999999998765432 22344455678899999999887777765 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|++. ++ ..+|++++|.+ |+++..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999875 5899999999985 34 45999999985 78888877
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 144
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-38 Score=330.24 Aligned_cols=194 Identities=26% Similarity=0.425 Sum_probs=166.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCe---ecCcc-cccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGW---ELDEF-QVQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~---~~~~~-~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
++|++|||||||||||++|+|+..|+ +|+|.+||. |.+.. .-.|.||||.|+..+|+++||.|||.||.+++.
T Consensus 30 ~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~ 106 (345)
T COG1118 30 LVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRK 106 (345)
T ss_pred EEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccc
Confidence 48999999999999999999999875 999999999 55543 235789999999999999999999999987652
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
...+. ...+.+++++|+.+.|++..+. +..+|||||||||++
T Consensus 107 ~~p~~---------------------------------~~~r~rv~elL~lvqL~~la~r-----yP~QLSGGQrQRVAL 148 (345)
T COG1118 107 ERPSE---------------------------------AEIRARVEELLRLVQLEGLADR-----YPAQLSGGQRQRVAL 148 (345)
T ss_pred cCCCh---------------------------------hhHHHHHHHHHHHhcccchhhc-----CchhcChHHHHHHHH
Confidence 11110 0112347888999999887664 456799999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+..|++||||||+++||++.+.++.++|+++.++.|.|++++ +|+.+++.+++|||++|++|+|...|+++|+.+
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfV-THD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFV-THDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEE-eCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 9999999999999999999999999999999999988778888876 577899999999999999999999999999843
No 145
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=339.89 Aligned_cols=206 Identities=22% Similarity=0.318 Sum_probs=177.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 589999998873 2458999999999999999999999999999999999876 3579999999765
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
. .+++.++|++|++.+++.+||+||+.+... . ..+++++++++.++|.+..+..++ .|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWPA-----ALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHH
Confidence 3 345679999999998988999999987421 0 123567889999999887777664 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++...+|++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999985 56788999999985 788887764
No 146
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.8e-37 Score=334.87 Aligned_cols=193 Identities=27% Similarity=0.424 Sum_probs=164.6
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 000860 675 LQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQEDV-HSPQV 750 (1250)
Q Consensus 675 ~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~yv~q~~~-~~~~l 750 (1250)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999865 357999999987542 234567999999974 36678
Q ss_pred CHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000860 751 TIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTS 830 (1250)
Q Consensus 751 tv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTs 830 (1250)
||+||+.+..... .....+.++.++++++.++|.+..++.++ .||||||||++|||||+.+|++++|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSPF-----TLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998865432 12334445678899999999877777765 499999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 831 GLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 831 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999975 566779999999863
No 147
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=338.96 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=181.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEec
Confidence 478899998873 2358999999999999999999999999999999999876 3579999999875
Q ss_pred C---------cccccceEEEEcCCCCCCCCCCHHHHHHHH-HhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000860 729 E---------QSTFARISGYVEQEDVHSPQVTIEESLWFS-ANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPG 798 (1250)
Q Consensus 729 ~---------~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~-~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~ 798 (1250)
. ....++.++|++|++.+++.+||.||+.+. .... +....+..+++.++++.+|+.+..++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--- 140 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFPL--- 140 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCChh---
Confidence 2 013456799999999999999999999753 2221 12334445678899999999887777765
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+
T Consensus 141 --~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~- 216 (242)
T PRK11124 141 --HLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN- 216 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 49999999999999999999999999999999999999999999999777999999999985 56678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 217 g~i~~~~~~ 225 (242)
T PRK11124 217 GHIVEQGDA 225 (242)
T ss_pred CEEEEeCCH
Confidence 788888875
No 148
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-37 Score=339.69 Aligned_cols=215 Identities=27% Similarity=0.391 Sum_probs=182.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (241)
T PRK10895 3 TLTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDI 67 (241)
T ss_pred eEEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 478899998763 2358999999999999999999999999999999999875 3579999999876
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
... ..++.++|++|++.+++.+||.||+.+...+.. ..+.++.+++++++++.+++.+..+..++ .|||
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 140 (241)
T PRK10895 68 SLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMGQ-----SLSG 140 (241)
T ss_pred CCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcchh-----hCCH
Confidence 431 235679999999998989999999987643321 12334455678899999999877766664 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|++. ++...+|++++|++ |++++.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~ 218 (241)
T PRK10895 141 GERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAH 218 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEee
Confidence 9999999999999999999999999999999999999999998777999999999974 57889999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 219 ~~~ 221 (241)
T PRK10895 219 GTP 221 (241)
T ss_pred CCH
Confidence 875
No 149
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-37 Score=345.35 Aligned_cols=216 Identities=25% Similarity=0.381 Sum_probs=183.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 5899999998741 2458999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-----ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000860 729 EQ-----STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGL 802 (1250)
Q Consensus 729 ~~-----~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~l 802 (1250)
.. ..+++.+||++|++. .+...||+||+.+..... +.+.++.+++++++++.+||.+..++.++ .|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPTH-----CL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCcc-----cC
Confidence 31 235678999999973 334679999998864322 23445556778999999999988887765 49
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999975 46678999999986 789
Q ss_pred EEeCCCC
Q 000860 882 IYGGKLG 888 (1250)
Q Consensus 882 ~~~g~~~ 888 (1250)
++.|+.+
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 150
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-37 Score=345.67 Aligned_cols=219 Identities=26% Similarity=0.348 Sum_probs=182.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 478899998874210 012469999999999999999999999999999999999876 3589999999875
Q ss_pred Cc-------ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQ-------STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~-------~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
.. ...++.++|++|++. .+..+||.||+.+..... ....++..++++++++.+||. +..++.++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~--- 145 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSPFE--- 145 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCccc---
Confidence 32 234567999999963 233589999998865432 234455667789999999997 567777654
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++ |
T Consensus 146 --LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 146 --LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 9999999999999999999999999999999999999999999999777999999999975 57789999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 89888875
No 151
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.6e-37 Score=336.52 Aligned_cols=217 Identities=26% Similarity=0.322 Sum_probs=174.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.+... .+..++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5788999877421 011368999999999999999999999999999999999865 35799999998764
Q ss_pred c------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000860 730 Q------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSF 800 (1250)
Q Consensus 730 ~------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~ 800 (1250)
. ..+++.++|++|++ .+++.+||+||+.+......+ ....+..+..++++++.+++. +..+..++
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYPH----- 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCch-----
Confidence 3 23456899999998 466789999999876543311 111111222235788999995 55666664
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999765 899999999985 56678999999985 7
Q ss_pred EEEEeC
Q 000860 880 RVIYGG 885 (1250)
Q Consensus 880 ~~~~~g 885 (1250)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 777654
No 152
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=9.5e-37 Score=338.73 Aligned_cols=214 Identities=26% Similarity=0.336 Sum_probs=179.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECCc
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 726 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g~ 726 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 57899998773 235899999999999999999999999999999999986532 12799999998
Q ss_pred cCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000860 727 PKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGSP 797 (1250)
Q Consensus 727 ~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~~ 797 (1250)
++.. ...++.++|++|++.+++ +|++||+.+....+. ..+.++..+.++++++.+|+. +..++.++
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-- 143 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSAL-- 143 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcc--
Confidence 7642 234567999999998888 999999988754431 123345556788999999997 55555554
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|++
T Consensus 144 ---~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 144 ---GLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred ---cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999876 589999999985 57788999999986
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 788888875
No 153
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1e-36 Score=340.45 Aligned_cols=214 Identities=22% Similarity=0.293 Sum_probs=181.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478999998873 2458999999999999999999999999999999999876 3579999999865
Q ss_pred Cc----------------ccccceEEEEcCCCCCCCCCCHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHHHHcCCcccc-
Q 000860 729 EQ----------------STFARISGYVEQEDVHSPQVTIEESLWFSAN-LRLPKEISKDQRHEFVEEVMSLVELDSLR- 790 (1250)
Q Consensus 729 ~~----------------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~-l~~~~~~~~~~~~~~v~~~l~~l~l~~~~- 790 (1250)
.. ..+++.++|++|++.+++.+||+||+.+... .. .....+.++++.++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1345679999999999999999999987542 21 123445567788999999998753
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhc
Q 000860 791 HALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFD 870 (1250)
Q Consensus 791 ~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 870 (1250)
+..+. .||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++...+|
T Consensus 147 ~~~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKYPV-----HLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 55443 59999999999999999999999999999999999999999999999877999999999985 5667899
Q ss_pred ceeeeecCcEEEEeCCC
Q 000860 871 ELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 871 ~v~~l~~gg~~~~~g~~ 887 (1250)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999986 788888875
No 154
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.2e-37 Score=334.78 Aligned_cols=199 Identities=28% Similarity=0.438 Sum_probs=164.8
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCC--CCCCH
Q 000860 675 LQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHS--PQVTI 752 (1250)
Q Consensus 675 ~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~--~~ltv 752 (1250)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 358999999999999999999999999999999999865 35799999998754 3456799999998763 34899
Q ss_pred HHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000860 753 EESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 831 (1250)
Q Consensus 753 ~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsg 831 (1250)
+||+.+....... .....++.+++++++++.+++.+..++.++ .||||||||++|||||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIG-----ELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 001123345678899999999887777765 4999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 832 LDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 832 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998777899999999985 57788999999974 5 44443
No 155
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=339.34 Aligned_cols=215 Identities=23% Similarity=0.286 Sum_probs=177.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 689999998873 235899999999999999999999999999999999976532 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ...++.++|++|++.+++ +||+||+.+...... .....+.+++++++++.+++. +..++.+
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 148 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTNA-- 148 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCCc--
Confidence 87532 234667999999988774 899999988754321 112334456788888988873 3345544
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++...+|++++|.
T Consensus 149 ---~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 149 ---LSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 3599999999999999999999999999999999999999999999996 4799999999985 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 156
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-37 Score=355.06 Aligned_cols=227 Identities=22% Similarity=0.275 Sum_probs=186.4
Q ss_pred eEEEEeEEEEEeCCccc--c--cc-------cccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCee
Q 000860 649 TMTFHNISYYVDTPQAM--R--SK-------GIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYI 717 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~--~--~~-------~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~ 717 (1250)
.++++|+++.+...+.. + .. ....+...+|+|+||+|++||+++|+|||||||||||++|+|..+ +.
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~ 81 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PT 81 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CC
Confidence 47888888766543210 0 00 001123458999999999999999999999999999999999876 35
Q ss_pred EEEEEECCccCCcc---c----ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccc
Q 000860 718 EGDIKISGYPKEQS---T----FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLR 790 (1250)
Q Consensus 718 ~G~i~~~g~~~~~~---~----~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~ 790 (1250)
+|+|.++|.++... . .++.+|||+|++.+++.+||+||+.+....+ ..+.++.+++++++++.+||.+..
T Consensus 82 sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~---~~~~~~~~~~~~e~L~~~gL~~~~ 158 (400)
T PRK10070 82 RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELA---GINAEERREKALDALRQVGLENYA 158 (400)
T ss_pred CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCChhh
Confidence 79999999886431 1 2357999999999999999999999876543 233455567789999999999888
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhh
Q 000860 791 HALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAF 869 (1250)
Q Consensus 791 ~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~ 869 (1250)
++.+. .||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++...+
T Consensus 159 ~~~~~-----~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~ 232 (400)
T PRK10070 159 HSYPD-----ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIG 232 (400)
T ss_pred hcCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhC
Confidence 87775 4999999999999999999999999999999999999999999999865 4899999999985 577899
Q ss_pred cceeeeecCcEEEEeCCC
Q 000860 870 DELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 870 d~v~~l~~gg~~~~~g~~ 887 (1250)
|++++|.+ |+++..|+.
T Consensus 233 Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 233 DRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CEEEEEEC-CEEEecCCH
Confidence 99999985 788888875
No 157
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-38 Score=314.75 Aligned_cols=206 Identities=24% Similarity=0.370 Sum_probs=162.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCeecCcc-----cccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLD--GNLNKSGSITYNGWELDEF-----QVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+||++|||||||||||+++.++.+ |....+|+|.++|+++.+. .+|+.+|.|+|.+.-|| +|+.||+.|+.+
T Consensus 35 VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r 113 (253)
T COG1117 35 VTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLR 113 (253)
T ss_pred eEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHH
Confidence 589999999999999999999765 3446899999999998432 46899999999999999 899999999999
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcc-ccccccCCCccccCccccch
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDL-CSDTVVGSEMLRGVSGGQKK 152 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkq 152 (1250)
+++.... ++ +++|+..|+.-+|.+ ..|.. .+ ...+|||||+|
T Consensus 114 ~~g~~~~------~l-----------------------------deiVe~sLk~AaLWdEVKDrL-~~-sa~~LSGGQQQ 156 (253)
T COG1117 114 LHGIKDK------EL-----------------------------DEIVESSLKKAALWDEVKDRL-HK-SALGLSGGQQQ 156 (253)
T ss_pred hhccchH------HH-----------------------------HHHHHHHHHHhHhHHHhHHHh-hC-CccCCChhHHH
Confidence 8765431 00 012334444444422 12221 11 12459999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChh
Q 000860 153 RVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRA 232 (1250)
Q Consensus 153 Rv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~ 232 (1250)
|++|||||+.+|+|||||||||+|||.+..+|-+.+.++.+ .-|+|++ +|...++.+..|+..++..|++++.|+.+
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviV-THnmqQAaRvSD~taFf~~G~LvE~g~T~ 233 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIV-THNMQQAARVSDYTAFFYLGELVEFGPTD 233 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEE-eCCHHHHHHHhHhhhhhcccEEEEEcCHH
Confidence 99999999999999999999999999999999999999964 4577765 56789999999999999999999999999
Q ss_pred hHHHHHHhCCCCCCCCCCchhHH
Q 000860 233 EVLEFFESLGFRLPPRKGVADFL 255 (1250)
Q Consensus 233 ~~~~~f~~lG~~~~~~~~~~~~~ 255 (1250)
++. ..|.++...||+
T Consensus 234 ~iF--------~~P~~~~TedYi 248 (253)
T COG1117 234 KIF--------TNPKHKRTEDYI 248 (253)
T ss_pred hhh--------cCccHHHHHHHh
Confidence 873 345555555544
No 158
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-37 Score=337.21 Aligned_cols=212 Identities=24% Similarity=0.358 Sum_probs=178.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 588999998763 2458999999999999999999999999999999999876 3579999999876
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCC
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLV-ELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~v~~~~~~~lS 803 (1250)
... ..++.++|++|++.+++.+||.||+.+..... ..++..+.++++++.+ ++.+..++.+. .||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~~-----~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRAG-----TMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCchh-----hCC
Confidence 431 23567999999999999999999998764221 1223344567777877 47666565554 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
||||||++|||+|+.+|+|++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999975 57889999999985 79999
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9886
No 159
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-37 Score=343.10 Aligned_cols=213 Identities=24% Similarity=0.374 Sum_probs=181.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. ++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYPD------------GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcCC------------CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 678899987731 2358999999999999999999999999999999999876 35899999998764
Q ss_pred c----ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 730 Q----STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 730 ~----~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
. ...++.+||++|++. .++..||.||+.+..... ..+.++.+++++++++.+||.+..++.++ .|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSPK-----TLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCcc-----cCCH
Confidence 2 234567999999975 366789999998865432 23445556778999999999988887765 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++||+||+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999777999999999985 44 67999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 885
No 160
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.1e-37 Score=348.23 Aligned_cols=195 Identities=32% Similarity=0.480 Sum_probs=169.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc--ccccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE--FQVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~--~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++++||||||||||+|+|+|+.+|+ +|+|.++|.+... ...++.+||++|++.+++.+||+|||.|.+.+++..
T Consensus 33 i~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~ 109 (293)
T COG1131 33 IFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLS 109 (293)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCC
Confidence 57999999999999999999999875 9999999998754 456788999999999999999999999998887543
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
... .+.+++++++.+||.+..+++++ +||+|||||++||+
T Consensus 110 ~~~-----------------------------------~~~~~~~~l~~~~L~~~~~~~~~-----~lS~G~kqrl~ia~ 149 (293)
T COG1131 110 KEE-----------------------------------AEERIEELLELFGLEDKANKKVR-----TLSGGMKQRLSIAL 149 (293)
T ss_pred hhH-----------------------------------HHHHHHHHHHHcCCchhhCcchh-----hcCHHHHHHHHHHH
Confidence 100 01237789999999986566665 49999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLEFF 238 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~~f 238 (1250)
||+++|++|||||||+||||.++.++++.|++++++.++||+++ +|...++..+||+|++|++|++++.|+.+++...+
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlis-sH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~ 228 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLS-THILEEAEELCDRVIILNDGKIIAEGTPEELKEKF 228 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEe-CCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhh
Confidence 99999999999999999999999999999999998655788877 55688899999999999999999999999977654
Q ss_pred H
Q 000860 239 E 239 (1250)
Q Consensus 239 ~ 239 (1250)
.
T Consensus 229 ~ 229 (293)
T COG1131 229 G 229 (293)
T ss_pred c
Confidence 3
No 161
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=342.84 Aligned_cols=215 Identities=27% Similarity=0.357 Sum_probs=183.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ..+++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 4899999998742 12458999999999999999999999999999999999876 3589999999886
Q ss_pred Cc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++.+++++++++.+||.+..++.++. |||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREPHR-----LSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCccc-----CCH
Confidence 43 234567999999973 667789999998865432 234455567789999999999888887754 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++ ..+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999975 34 46999999985 78899
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 8885
No 162
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=325.35 Aligned_cols=177 Identities=27% Similarity=0.359 Sum_probs=154.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||||+|+|+.+|+ +|+|.++|.++ ..+...++||+|++.++|=+||+||+.++...++....
T Consensus 31 fvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~ 105 (248)
T COG1116 31 FVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKSKA 105 (248)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHHhhheehhhccccchH
Confidence 47999999999999999999999875 99999999987 34567899999999999999999999999876542111
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
+ .+.++++.|+.+||.+..|... ++|||||||||+|||||
T Consensus 106 -----------e------------------------~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQRVaiARAL 145 (248)
T COG1116 106 -----------E------------------------ARERAKELLELVGLAGFEDKYP-----HQLSGGMRQRVAIARAL 145 (248)
T ss_pred -----------h------------------------HHHHHHHHHHHcCCcchhhcCc-----cccChHHHHHHHHHHHH
Confidence 0 0123678999999999888665 55999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCC
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDG 223 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G 223 (1250)
+.+|+||+||||+++||+.++.++.+.|.++.++.++|++++ +|+.+|+..++|||++|.++
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllV-THdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLV-THDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEE-eCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999999999888888898886 56789999999999999984
No 163
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.2e-36 Score=338.93 Aligned_cols=214 Identities=23% Similarity=0.330 Sum_probs=180.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 36788988773 2358999999999999999999999999999999999876 35899999998753
Q ss_pred c----------------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000860 730 Q----------------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHAL 793 (1250)
Q Consensus 730 ~----------------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~ 793 (1250)
. ..+++.++|++|++.+++..||.||+.+..... .....++.++.++++++.+|+.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 124567999999999999999999998764211 1223445556788999999998877776
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcce
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
+. .||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++
T Consensus 144 ~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 PA-----QLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred hh-----hcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 64 49999999999999999999999999999999999999999999998765 899999999985 577889999
Q ss_pred eeeecCcEEEEeCCC
Q 000860 873 LLMKRGGRVIYGGKL 887 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~ 887 (1250)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 788888875
No 164
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=338.37 Aligned_cols=214 Identities=27% Similarity=0.316 Sum_probs=178.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 589999998763 235899999999999999999999999999999999976531 3589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ +|++||+.+..... +.+.++.+++++++++.+++. +..++.++
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~- 153 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSPAL- 153 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCChh-
Confidence 87532 134567999999988887 89999999875432 223444456688899999884 33444443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|+
T Consensus 154 ----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 154 ----SLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999999864 899999999975 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 789888875
No 165
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-38 Score=349.49 Aligned_cols=191 Identities=26% Similarity=0.404 Sum_probs=168.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccc-cceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQV-QRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++++|||||||||||++|+|+..|+ +|+|.++|++++...+ +|.+|+|+|+..+||++||+||+.|+++.+....
T Consensus 33 f~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~ 109 (352)
T COG3842 33 FVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLK 109 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCCC
Confidence 36899999999999999999999975 9999999999987644 6889999999999999999999999987432111
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. ++ .+++++++|+.++|++..+..+ .+|||||||||+||||
T Consensus 110 ~--------------------~~--------------i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARA 150 (352)
T COG3842 110 K--------------------AE--------------IKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARA 150 (352)
T ss_pred H--------------------HH--------------HHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHH
Confidence 0 00 1135889999999999877665 4599999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
|+.+|++||||||.|+||..-+.++..-|+++.++.|.|.|.+ +|+..|.+.++|||++|++|++...|+++++
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~V-THDqeEAl~msDrI~Vm~~G~I~Q~gtP~ei 224 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYV-THDQEEALAMSDRIAVMNDGRIEQVGTPEEI 224 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEE-ECCHHHHhhhccceEEccCCceeecCCHHHH
Confidence 9999999999999999999999999999999998889998887 5678999999999999999999999999998
No 166
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=336.80 Aligned_cols=217 Identities=24% Similarity=0.271 Sum_probs=179.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 478999998763 235899999999999999999999999999999999976531 3589999999
Q ss_pred ccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 000860 726 YPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGSPG 798 (1250)
Q Consensus 726 ~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~~~ 798 (1250)
.++.. ..+++.+||++|++.+++.+||+||+.+....+.. ....++.++.++++++.++|.+ ..++.+
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---- 144 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAPA---- 144 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc----
Confidence 87642 23466799999999888899999999886543211 1123444567889999999854 334444
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++...+|++++|++
T Consensus 145 -~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 145 -GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 35999999999999999999999999999999999999999999999864 899999999985 56788999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 788888875
No 167
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=338.21 Aligned_cols=214 Identities=27% Similarity=0.421 Sum_probs=180.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~ 66 (258)
T PRK13548 2 MLEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPL 66 (258)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 368899998773 2358999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
.. ..+++.++|++|++.+++.+||+||+.+..... ....++.++.++++++.+++.+..++.++. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 138 (258)
T PRK13548 67 ADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDYPQ-----LSGG 138 (258)
T ss_pred ccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCccc-----CCHH
Confidence 42 234567999999988888899999998864321 112233445688999999998877777754 9999
Q ss_pred HHHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 806 QRKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRAVRNTV-DTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 806 erqr~~ia~~l~------~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. ++...+|++++|.+
T Consensus 139 e~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~- 216 (258)
T PRK13548 139 EQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ- 216 (258)
T ss_pred HHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-
Confidence 999999999999 5999999999999999999999999999987 56899999999975 57778999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (258)
T PRK13548 217 GRLVADGTP 225 (258)
T ss_pred CEEEeeCCH
Confidence 788888875
No 168
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.1e-36 Score=330.74 Aligned_cols=208 Identities=25% Similarity=0.383 Sum_probs=178.0
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 5778887663 2458999999999999999999999999999999999865 458999999987643
Q ss_pred ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000860 731 STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRL 810 (1250)
Q Consensus 731 ~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~ 810 (1250)
.. ++.++|++|++.+++.+|++||+.+....+. .. ++.+.++++.+|+.+..+..++ .||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKAK-----QFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhHh-----hCCHHHHHHH
Confidence 22 3578999999988989999999987654321 11 2357788999999988777765 4999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 811 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 811 ~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
+|||+++.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |+++..|++.
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999777999999999985 57788999999985 7888888764
No 169
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-37 Score=300.40 Aligned_cols=214 Identities=29% Similarity=0.411 Sum_probs=185.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
+...+++.+|+.. ...+|+|+|++|.+||.++++||||||||||||+++|..+ +..|.|.+||.++.
T Consensus 4 l~~~~~sl~y~g~-----------~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~ 70 (259)
T COG4525 4 LNVSHLSLSYEGK-----------PRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIE 70 (259)
T ss_pred eehhheEEecCCc-----------chhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEecc
Confidence 4555666666432 2458999999999999999999999999999999999877 45799999999876
Q ss_pred cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 730 QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 730 ~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
...- .-|.|+|++.++|.+||.+|+.|+.+++ ++++.++.+++.+.+..+||++..++.+- .||||||||
T Consensus 71 gPga--ergvVFQ~~~LlPWl~~~dNvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~-----qLSGGmrQR 140 (259)
T COG4525 71 GPGA--ERGVVFQNEALLPWLNVIDNVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYIW-----QLSGGMRQR 140 (259)
T ss_pred CCCc--cceeEeccCccchhhHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccceE-----eecchHHHH
Confidence 5332 2478999999999999999999999887 67889999999999999999999888774 599999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeec-CcEEEEeCCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKR-GGRVIYGGKL 887 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~-gg~~~~~g~~ 887 (1250)
+.|||||..+|++|+||||.++||.-+++.+++.|-++.+ .|+.++++||+.. |..-+++++++|+. .|+++..=++
T Consensus 141 vGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 141 VGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 9999999999999999999999999999999999888754 5999999999985 45557899999973 2577776665
No 170
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=340.56 Aligned_cols=215 Identities=25% Similarity=0.384 Sum_probs=182.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (277)
T PRK13652 3 LIETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPI 68 (277)
T ss_pred eEEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788999988742 2358999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.++|++|++. .+...||.||+.+..... ..+.++.+++++++++.++|.+..++.+. .|||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 140 (277)
T PRK13652 69 TKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVPH-----HLSG 140 (277)
T ss_pred CcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCcc-----cCCH
Confidence 43 234567899999974 344679999998765422 23445556678999999999988887775 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 141 Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~ 218 (277)
T PRK13652 141 GEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVA 218 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999985 57789999999986 78899
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 219 ~g~~ 222 (277)
T PRK13652 219 YGTV 222 (277)
T ss_pred ECCH
Confidence 8886
No 171
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-36 Score=335.19 Aligned_cols=216 Identities=24% Similarity=0.342 Sum_probs=180.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 66 (242)
T TIGR03411 2 ILYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDL 66 (242)
T ss_pred eEEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeec
Confidence 368899998763 2358999999999999999999999999999999999865 3579999999875
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-----KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
... ..++.++|++|++.+++.+||+||+.+....... .....++.+++++++++.+|+.+..++.++.
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (242)
T TIGR03411 67 TGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGL--- 143 (242)
T ss_pred CCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhh---
Confidence 431 1234699999999999999999999886432100 0012234456789999999998877777654
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |
T Consensus 144 --LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g 218 (242)
T TIGR03411 144 --LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-G 218 (242)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 999999999999999999999999999999999999999999999865 799999999975 57778999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
+++..|+.
T Consensus 219 ~~~~~~~~ 226 (242)
T TIGR03411 219 SVLAEGSL 226 (242)
T ss_pred eEEeeCCH
Confidence 88888875
No 172
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=336.91 Aligned_cols=217 Identities=25% Similarity=0.286 Sum_probs=179.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 578999998873 235899999999999999999999999999999999986542 3589999999
Q ss_pred ccCC-----cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKE-----QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~-----~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++. ...+++.++|++|++.+++.+||.||+.+....+. ...+.++..++++++++.+++.. ..++.+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 147 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG-LVKSKKELDERVEWALKKAALWDEVKDRLNDYP-- 147 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcC-ccCCHHHHHHHHHHHHHHcCCccchhhhhccCh--
Confidence 8764 12345679999999999999999999988754321 11123444566888999998853 233433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|+
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 148 ---SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 799999999985 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 173
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.9e-36 Score=336.12 Aligned_cols=219 Identities=21% Similarity=0.266 Sum_probs=177.2
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 36788888773 23589999999999999999999999999999999997411146899999998754
Q ss_pred cc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000860 730 QS---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPK----EISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSF 800 (1250)
Q Consensus 730 ~~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~ 800 (1250)
.. . .+..++|++|++.+++.+|++|++.+........ ..+.++..++++++++.++|. ...++.++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 2 2334899999999999999999998764322110 112333456788999999997 45555543 1
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh-hcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEA-FDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~v~~l~~gg 879 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877899999999985 45566 799999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 88888875
No 174
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=340.75 Aligned_cols=213 Identities=25% Similarity=0.385 Sum_probs=179.2
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 67899998773 2358999999999999999999999999999999999876 35899999998763
Q ss_pred c-----ccccceEEEEcCCCCC-CCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 Q-----STFARISGYVEQEDVH-SPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~-----~~~~~~~~yv~q~~~~-~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
. ..+++.++|++|++.. ++..|+.||+.+..... +...++..++++++++.+++.+..++.++ .||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPIQ-----CLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCch-----hCC
Confidence 1 1345679999999753 34568999998764332 22344455678899999999888777665 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|.+ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998777899999999985 56688999999985 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8875
No 175
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=308.81 Aligned_cols=191 Identities=27% Similarity=0.323 Sum_probs=169.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecC--cccccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELD--EFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~--~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+|||||||||+|++|++++.|+ +|.|+++|.+.. +...++.+|.++.+..++..+|++|||.|.+++.+..
T Consensus 30 i~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~ 106 (245)
T COG4555 30 ITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGLS 106 (245)
T ss_pred EEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhhh
Confidence 58999999999999999999999875 999999999874 3356889999998889999999999999998876543
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. +.+.+++++.+.|+|.++.|+++|+ +|-|+||||+|||
T Consensus 107 ~~-----------------------------------~~kari~~l~k~l~l~~~~~rRv~~-----~S~G~kqkV~iAR 146 (245)
T COG4555 107 RK-----------------------------------EIKARIAELSKRLQLLEYLDRRVGE-----FSTGMKQKVAIAR 146 (245)
T ss_pred hh-----------------------------------HHHHHHHHHHHHhChHHHHHHHHhh-----hchhhHHHHHHHH
Confidence 21 1123477889999999999999987 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|++++|||||||||..+...+.+.++++.. .|+++|.+ +|..+++..+||+|+++++|++++.|+.+++.+
T Consensus 147 Alvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFS-SH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 147 ALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFS-SHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEe-cccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 99999999999999999999999999999999864 48999998 567899999999999999999999999998754
No 176
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-37 Score=315.30 Aligned_cols=199 Identities=26% Similarity=0.380 Sum_probs=166.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+|||||||||||++|.|+.+++ +|+|.+||.++... .+++.+|+++|++.+.+.+||.+|+..+...
T Consensus 32 ~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~ 108 (258)
T COG3638 32 MVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLG 108 (258)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcc
Confidence 58999999999999999999999865 99999999877432 3578899999999999999999999887532
Q ss_pred cCCCcchhhHhHhh-hHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 75 QGANDSFAAYIKDL-TRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
+. +.+.....+ +..+ +..+-+.|+.+|+.+.+.++.+. |||||+||
T Consensus 109 ~~---s~~~slfglfsk~d-------------------------k~~Al~aLervgi~~~A~qra~~-----LSGGQQQR 155 (258)
T COG3638 109 YT---STWRSLFGLFSKED-------------------------KAQALDALERVGILDKAYQRAST-----LSGGQQQR 155 (258)
T ss_pred cc---hHHHHHhCCCCHHH-------------------------HHHHHHHHHHcCcHHHHHHHhcc-----CCcchhHH
Confidence 21 111111111 1111 11245689999999888888765 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|+|+|-|||+++|||.+++++++.|++++++.|.|+|+.+|+ .+-+.++||||+-|++|+++|+|++++
T Consensus 156 VaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~-vdlA~~Y~~Riigl~~G~ivfDg~~~e 234 (258)
T COG3638 156 VAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQ-VDLAKKYADRIIGLKAGRIVFDGPASE 234 (258)
T ss_pred HHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEech-HHHHHHHHhhheEecCCcEEEeCChhh
Confidence 9999999999999999999999999999999999999999999999999776 677888999999999999999999998
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+.+
T Consensus 235 l~~ 237 (258)
T COG3638 235 LTD 237 (258)
T ss_pred hhH
Confidence 754
No 177
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.7e-36 Score=349.53 Aligned_cols=204 Identities=23% Similarity=0.335 Sum_probs=176.8
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCc----cCCc---c---cc-cceEEEEc
Q 000860 673 KKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGY----PKEQ---S---TF-ARISGYVE 741 (1250)
Q Consensus 673 ~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~----~~~~---~---~~-~~~~~yv~ 741 (1250)
+...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|. ++.. . .. ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45678999999999999999999999999999999999876 45799999996 3221 1 12 25799999
Q ss_pred CCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCc
Q 000860 742 QEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPS 821 (1250)
Q Consensus 742 q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~ 821 (1250)
|++.++|.+||+||+.+....+ ..++++.+++++++++.+||.+..++.++. ||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~~-----LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPGE-----LSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999886543 234556677889999999999888887754 99999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 822 IIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 822 il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999998764 899999999985 57789999999985 7899988863
No 178
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=337.54 Aligned_cols=217 Identities=21% Similarity=0.263 Sum_probs=180.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 588999998773 2468999999999999999999999999999999999866 4589999999876
Q ss_pred Ccc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC----------CCC--CHHHHHHHHHHHHHHcCCcccccc
Q 000860 729 EQS---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLP----------KEI--SKDQRHEFVEEVMSLVELDSLRHA 792 (1250)
Q Consensus 729 ~~~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~----------~~~--~~~~~~~~v~~~l~~l~l~~~~~~ 792 (1250)
... . .+..++|++|++.+++.+||+||+.+....... ... ...+..+.++++++.+|+.+..++
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 234589999999999999999999986432110 000 112334567888999999887777
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcc
Q 000860 793 LVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDE 871 (1250)
Q Consensus 793 ~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 871 (1250)
.++. ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|+
T Consensus 150 ~~~~-----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QAGN-----LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 7654 9999999999999999999999999999999999999999999998765 899999999975 57788999
Q ss_pred eeeeecCcEEEEeCCC
Q 000860 872 LLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 872 v~~l~~gg~~~~~g~~ 887 (1250)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 788888875
No 179
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=341.35 Aligned_cols=218 Identities=24% Similarity=0.361 Sum_probs=179.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++... ...+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 478999998874210 012468999999999999999999999999999999999866 3589999999875
Q ss_pred Cc-------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000860 729 EQ-------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~-------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~ 798 (1250)
.. ..+++.++|++|++ .+++ .||+||+.+..... ..+.++.+++++++++.++|. ...++.++
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 144 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNPF--- 144 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCcc---
Confidence 42 23456799999996 3444 69999998865432 223445556788999999997 35566654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++
T Consensus 145 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~- 220 (280)
T PRK13649 145 --ELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK- 220 (280)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-
Confidence 49999999999999999999999999999999999999999999999777899999999985 56778999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (280)
T PRK13649 221 GKLVLSGKP 229 (280)
T ss_pred CEEEEeCCH
Confidence 788888875
No 180
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.7e-36 Score=330.18 Aligned_cols=213 Identities=25% Similarity=0.365 Sum_probs=177.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 589999998874210 11358999999999999999999999999999999999876 3589999999876
Q ss_pred Cccc------c-cceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 729 EQST------F-ARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~~~------~-~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
.... . ++.++|++|++.+++.+||.||+.+....+ .....+.+++++++++.+++.+..++.+. .
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLPA-----Q 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCChh-----h
Confidence 4311 1 257999999999999999999998865432 12334456778999999999887777765 4
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. .+ ..+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999985 34 56999999985 67
Q ss_pred EEE
Q 000860 881 VIY 883 (1250)
Q Consensus 881 ~~~ 883 (1250)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 654
No 181
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=339.22 Aligned_cols=215 Identities=24% Similarity=0.376 Sum_probs=182.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. +++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 6899999987731 13468999999999999999999999999999999999876 3579999999886
Q ss_pred Cc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.++|++|++. .++.+||+||+.+..... ..+.++.+++++++++.++|.+..++.++ .|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEPQ-----NLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCcc-----cCCH
Confidence 43 235678999999974 567889999998865422 22344456678999999999988888775 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|++. ++ ..+|++++|.+ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 589999999986 34 57999999985 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 182
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=338.01 Aligned_cols=218 Identities=24% Similarity=0.358 Sum_probs=181.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (255)
T PRK11231 2 TLRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPI 66 (255)
T ss_pred EEEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEh
Confidence 478899998773 2468999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.++|++|++.+++.+|+.|++.++...... .....++..++++++++.+++.+..++.++ .|||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 141 (255)
T PRK11231 67 SMLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLT-----DLSG 141 (255)
T ss_pred HHCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcc-----cCCH
Confidence 32 23456799999999888889999999875311000 011123345568889999999887777765 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 142 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (255)
T PRK11231 142 GQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQ 219 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEE
Confidence 9999999999999999999999999999999999999999998777999999999985 57889999999985 788888
Q ss_pred CCCC
Q 000860 885 GKLG 888 (1250)
Q Consensus 885 g~~~ 888 (1250)
|+.+
T Consensus 220 ~~~~ 223 (255)
T PRK11231 220 GTPE 223 (255)
T ss_pred cCHH
Confidence 8763
No 183
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=328.60 Aligned_cols=208 Identities=25% Similarity=0.395 Sum_probs=172.9
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. +. .|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~-------------~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~ 64 (211)
T cd03298 2 RLDKIRFSYGE-------------QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTA 64 (211)
T ss_pred EEEeEEEEeCC-------------Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCc
Confidence 57888887631 11 29999999999999999999999999999999876 357999999987643
Q ss_pred -ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 -STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 -~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
...++.++|++|++.+++.+||+||+.+....+. .. .++.+++++++++.+++.+..++.+. .||||||||
T Consensus 65 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 136 (211)
T cd03298 65 APPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLPG-----ELSGGERQR 136 (211)
T ss_pred CCHhHccEEEEecccccCCCCcHHHHHhccccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHH
Confidence 2234679999999999999999999987543211 11 12345568899999999887777765 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 v~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 137 VALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999999999999999999999999999999998754 899999999974 56678999999985 7776653
No 184
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=338.21 Aligned_cols=220 Identities=26% Similarity=0.376 Sum_probs=182.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCcc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 727 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 588999998773 246899999999999999999999999999999999986543 236999999987
Q ss_pred CCc--------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC-----CCCHHHHHHHHHHHHHHcCCcccccccc
Q 000860 728 KEQ--------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPK-----EISKDQRHEFVEEVMSLVELDSLRHALV 794 (1250)
Q Consensus 728 ~~~--------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~-----~~~~~~~~~~v~~~l~~l~l~~~~~~~v 794 (1250)
+.. ...++.++|++|++.+++.+||+||+.+......+. ....++.+++++++++.+|+.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123557899999999999999999998754211110 1112334567899999999988777776
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhccee
Q 000860 795 GSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELL 873 (1250)
Q Consensus 795 ~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~ 873 (1250)
+ .||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++++ .|+|||+++|++. ++...+|+++
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 5 4999999999999999999999999999999999999999999999975 4899999999985 4778899999
Q ss_pred eeecCcEEEEeCCCC
Q 000860 874 LMKRGGRVIYGGKLG 888 (1250)
Q Consensus 874 ~l~~gg~~~~~g~~~ 888 (1250)
+|.+ |++++.|+.+
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7888888763
No 185
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=344.06 Aligned_cols=225 Identities=24% Similarity=0.274 Sum_probs=184.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+....... ...+.+.+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 589999999885321100 001235699999999999999999999999999999999998763 579999999886
Q ss_pred Cc------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000860 729 EQ------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGS 799 (1250)
Q Consensus 729 ~~------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~ 799 (1250)
.. ..+++.++||+|++ .+.|.+||.+++........ ...+++.++++.++++.+||.+ ..++.+.
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~---- 153 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRYPH---- 153 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCCCc----
Confidence 43 13456799999997 58899999999877654321 2345566678999999999963 5566554
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++|||||+.+|++|++||||++||..++..+++.|+++.++ |.|||++||+.+ .+...+|++++|.+
T Consensus 154 -~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 154 -MFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 59999999999999999999999999999999999999999999998764 999999999975 46678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 186
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-37 Score=316.27 Aligned_cols=193 Identities=27% Similarity=0.401 Sum_probs=163.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||||+|.|+++|+ +|+|.++|.++... ..++++|+++|+-.+|..+||.||+.|..+-
T Consensus 36 i~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre 112 (263)
T COG1127 36 ILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLRE 112 (263)
T ss_pred EEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHh
Confidence 47999999999999999999999975 99999999998432 3578899999999999999999999997643
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccc-cccccCCCccccCccccchh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLC-SDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~~t~vg~~~~~~LSGGqkqR 153 (1250)
+..- +.+.+ ++.+..-|+..||... .+... .+||||++||
T Consensus 113 ~~~l--------------------p~~~i--------------~~lv~~KL~~VGL~~~~~~~~P-----sELSGGM~KR 153 (263)
T COG1127 113 HTKL--------------------PESLI--------------RELVLMKLELVGLRGAAADLYP-----SELSGGMRKR 153 (263)
T ss_pred hccC--------------------CHHHH--------------HHHHHHHHHhcCCChhhhhhCc-----hhhcchHHHH
Confidence 2111 10111 1124455888999765 55444 4599999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
++||||++.+|+++++||||+||||.++..+-+.++++.+..+.|++++ +|+..++...+||+++|.+|+|++.|++++
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~V-THDl~s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMV-THDLDSLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEE-ECChHHHHhhhceEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998888888886 566899999999999999999999999999
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+.+
T Consensus 233 l~~ 235 (263)
T COG1127 233 LLA 235 (263)
T ss_pred HHh
Confidence 865
No 187
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=338.72 Aligned_cols=217 Identities=31% Similarity=0.411 Sum_probs=181.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 589999998773 2368999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.++|++|++.+++.+||.||+.+....... ........+++++++++.+++.+..++.++. |||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDS-----LSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCccc-----CCH
Confidence 32 23456799999998888899999999875321100 0111223346688999999998877777754 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999985 57788999999985 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 188
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.5e-36 Score=332.21 Aligned_cols=201 Identities=28% Similarity=0.453 Sum_probs=170.6
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc--ccccceEEEEc-CCCCCCCC
Q 000860 673 KKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ--STFARISGYVE-QEDVHSPQ 749 (1250)
Q Consensus 673 ~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~yv~-q~~~~~~~ 749 (1250)
+.+++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34679999999999999999999999999999999999876 358999999986432 23456799997 55677889
Q ss_pred CCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000860 750 VTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPT 829 (1250)
Q Consensus 750 ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPT 829 (1250)
+||+|++.+..... ....++..++++++++.+++.+..++.++ .||||||||++||++|+.+|++++|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998876543 22344455678889999999988888775 49999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 830 SGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 830 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999985 56788999999985 7877654
No 189
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=322.71 Aligned_cols=196 Identities=35% Similarity=0.617 Sum_probs=163.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCcc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 727 (1250)
.+.|+|++|.|+.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57999999998653 13457999999999999999999999999999999999986532 468999999987
Q ss_pred CCc--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 728 KEQ--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 728 ~~~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
+.. ...++.++|++|++.+++.+||+||+.+..... .+..+ ..||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~~-----~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEFV-----RGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccch-----hhCCHH
Confidence 643 235667999999999999999999998764211 22333 359999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 678777776654567889999999986 788765
Q ss_pred C
Q 000860 885 G 885 (1250)
Q Consensus 885 g 885 (1250)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 190
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-36 Score=335.25 Aligned_cols=217 Identities=23% Similarity=0.308 Sum_probs=179.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 478999998873 235899999999999999999999999999999999976532 2589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++.+||+||+.+....+. ..+.++.+++++++++.+++. +..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKPG-- 146 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc--
Confidence 87531 2345679999999999999999999988754321 113344556788899999984 2334444
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 147 ---GGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 35999999999999999999999999999999999999999999999864 689999999975 5778899999997
Q ss_pred -----cCcEEEEeCCC
Q 000860 877 -----RGGRVIYGGKL 887 (1250)
Q Consensus 877 -----~gg~~~~~g~~ 887 (1250)
+.|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 24899998875
No 191
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-36 Score=343.04 Aligned_cols=221 Identities=18% Similarity=0.271 Sum_probs=181.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-C-eeEEEEEECCc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG-G-YIEGDIKISGY 726 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~-~-~~~G~i~~~g~ 726 (1250)
.++++|+++.+.... +..++|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDES---------APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCCC---------ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 478999999885321 124699999999999999999999999999999999997642 2 35899999998
Q ss_pred cCCcc---c----ccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc---ccccc
Q 000860 727 PKEQS---T----FARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL---RHALV 794 (1250)
Q Consensus 727 ~~~~~---~----~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~v 794 (1250)
++... . .++.++||+|++ .+.|.+||.+++....... .+...++.++++.++++.+||.+. .+..+
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~--~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p 151 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVH--QGGNKKTRRQRAIDLLNQVGIPDPASRLDVYP 151 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhCCc
Confidence 86431 1 224699999998 4788999999886654332 123455667788999999999753 34444
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhccee
Q 000860 795 GSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELL 873 (1250)
Q Consensus 795 ~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~ 873 (1250)
..|||||||||+|||||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+.+ .+.+.+|+|+
T Consensus 152 -----~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~ 225 (326)
T PRK11022 152 -----HQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKII 225 (326)
T ss_pred -----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 35999999999999999999999999999999999999999999999976 4899999999975 4668899999
Q ss_pred eeecCcEEEEeCCC
Q 000860 874 LMKRGGRVIYGGKL 887 (1250)
Q Consensus 874 ~l~~gg~~~~~g~~ 887 (1250)
+|.+ |+++..|+.
T Consensus 226 vm~~-G~ive~g~~ 238 (326)
T PRK11022 226 VMYA-GQVVETGKA 238 (326)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 899999885
No 192
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=338.44 Aligned_cols=214 Identities=27% Similarity=0.370 Sum_probs=180.6
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.+.. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYPD------------GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 678999988731 2358999999999999999999999999999999999876 35799999998763
Q ss_pred c-----ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 Q-----STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~-----~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
. ...++.++|++|++. .+...||.|++.+..... ....++..+++.++++.++|.+..++.++. ||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~-----LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPPHH-----LS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCChhh-----CC
Confidence 1 124567999999963 334579999998764321 233445566788999999999888887754 99
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777999999999975 56778999999986 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8886
No 193
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-36 Score=337.85 Aligned_cols=218 Identities=22% Similarity=0.311 Sum_probs=182.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 689999999874 2358999999999999999999999999999999999876 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.++|++|++.+++..|++|++.+......+ .....+..+++++++++.++|.+..++.+. .|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVD-----TLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCh
Confidence 43 23456799999999988899999999865211100 001112334568899999999887777765 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999985 57889999999985 78888
Q ss_pred eCCCC
Q 000860 884 GGKLG 888 (1250)
Q Consensus 884 ~g~~~ 888 (1250)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 88863
No 194
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-36 Score=335.37 Aligned_cols=216 Identities=25% Similarity=0.330 Sum_probs=178.2
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeEEEEEEC
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKIS 724 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~-~~~~G~i~~~ 724 (1250)
..++++|+++.++ ++++|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 4689999998873 2358999999999999999999999999999999999754 1 1357999999
Q ss_pred CccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----cccccccc
Q 000860 725 GYPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVG 795 (1250)
Q Consensus 725 g~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~ 795 (1250)
|.++.. ..+++.++|++|++.+++ .||+||+.+...... ..+.++.+++++++++.+++. +..+..+
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 154 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQSG- 154 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcCC-
Confidence 987632 234677999999988887 899999987654321 233444556788999999984 2334444
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeee
Q 000860 796 SPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 796 ~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++...+|++++|
T Consensus 155 ----~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 155 ----YSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred ----CCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 3599999999999999999999999999999999999999999999985 4789999999975 567789999999
Q ss_pred ecCcEEEEeCCC
Q 000860 876 KRGGRVIYGGKL 887 (1250)
Q Consensus 876 ~~gg~~~~~g~~ 887 (1250)
++ |+++..|+.
T Consensus 229 ~~-G~i~~~g~~ 239 (260)
T PRK10744 229 YL-GELIEFGNT 239 (260)
T ss_pred EC-CEEEEeCCH
Confidence 85 788888875
No 195
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.5e-36 Score=336.29 Aligned_cols=224 Identities=22% Similarity=0.327 Sum_probs=181.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++...... ..+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDL 75 (265)
T ss_pred eEEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 378899998874210000 0113569999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc------cccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQS------TFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~~------~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
... .+++.++|++|++ .+.+.+||+|++.+..... .....++.+++++++++.+|+. +..+..++
T Consensus 76 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~---- 149 (265)
T TIGR02769 76 YQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKLPR---- 149 (265)
T ss_pred cccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCChh----
Confidence 431 1356799999996 4667899999997754321 1123334456788999999996 56666654
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+...+|++++|++
T Consensus 150 -~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~- 226 (265)
T TIGR02769 150 -QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK- 226 (265)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-
Confidence 49999999999999999999999999999999999999999999998765 899999999975 56678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 227 G~i~~~g~~ 235 (265)
T TIGR02769 227 GQIVEECDV 235 (265)
T ss_pred CEEEEECCH
Confidence 799998886
No 196
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=336.89 Aligned_cols=216 Identities=25% Similarity=0.340 Sum_probs=181.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 5899999988742 12358999999999999999999999999999999999876 3589999999876
Q ss_pred Cc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.++|++|++. +++..|+++|+.+..... ....++..+.++++++.+++.+..++.++ .|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEPN-----ALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCcc-----cCCH
Confidence 43 235667999999974 677889999998864322 22344455678899999999887777664 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 454 4999999985 78988
Q ss_pred eCCCC
Q 000860 884 GGKLG 888 (1250)
Q Consensus 884 ~g~~~ 888 (1250)
.|+.+
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 88863
No 197
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-36 Score=333.77 Aligned_cols=215 Identities=27% Similarity=0.355 Sum_probs=176.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT---GGYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~---~~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|... +.+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 589999998873 2358999999999999999999999999999999999642 113589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL----RHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ....+..+++++++++.+++.+. .++.+
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 147 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHESA-- 147 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhCCc--
Confidence 87642 234567999999998887 599999988754321 11233445678889999998542 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 148 ---~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14242 148 ---LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFY 222 (253)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999854 799999999985 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14242 223 M-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 6 788888775
No 198
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3e-36 Score=331.32 Aligned_cols=211 Identities=27% Similarity=0.370 Sum_probs=174.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35788888763 2368999999999999999999999999999999999876 35899999998754
Q ss_pred cc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCH
Q 000860 730 QS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVE-LDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 730 ~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..++.++|++|++.+++.+|++|++.+....+ ... ..+..+++++.++ +.+..++.++ .|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~---~~~~~~~~l~~~~~l~~~~~~~~~-----~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAAL---PRR---SRKIPDEIYELFPVLKEMLGRRGG-----DLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhc---Ccc---hHHHHHHHHHHHHhHHHHhhCChh-----hCCH
Confidence 31 12457999999999999999999998875432 111 1234567777776 5665666654 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|.+ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999975 56678999999985 78888
Q ss_pred eCCCC
Q 000860 884 GGKLG 888 (1250)
Q Consensus 884 ~g~~~ 888 (1250)
.|+.+
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 88864
No 199
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.2e-36 Score=330.20 Aligned_cols=212 Identities=29% Similarity=0.431 Sum_probs=180.8
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5788888763 2359999999999999999999999999999999999866 357999999987643
Q ss_pred c-cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 S-TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 ~-~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
. ..++.++|++|++.+++.+|+.||+.+....+ ..+.....+.++++++.+++.+..++.++ .|||||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYPN-----QLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCChh-----hCCHHHHHH
Confidence 2 23567999999999999999999998765432 12333445677899999999877777765 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++|||+|+.+|++++|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999985 57788999999985 788888875
No 200
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-36 Score=319.12 Aligned_cols=190 Identities=60% Similarity=0.964 Sum_probs=162.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++... +++++|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 478999998875310 12468999999999999999999999999999999999643224689999999876
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
. ..+++.++|++|++.+++.+||+||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 345677999999998999999999998653110 39999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|++|||+|+.+|++++|||||+|||+.++..+.+.|+++++.|+|||+++|+++.++...+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998634678899999998547888765
No 201
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-36 Score=329.02 Aligned_cols=212 Identities=28% Similarity=0.398 Sum_probs=180.8
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
.++|+++.++ .+.+|+|+|++++|||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5788888763 2369999999999999999999999999999999999876 357999999987643
Q ss_pred c-cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 S-TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 ~-~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
. ..++.++|++|++.+++.+|++||+.+....+ ..+.....+.++++++.+|+.+..++.+. .||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRKPS-----QLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHH
Confidence 1 23567999999999988999999998876543 12334445678899999999888877764 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++.+.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999984 57788999999985 788888764
No 202
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=5.1e-36 Score=325.05 Aligned_cols=209 Identities=22% Similarity=0.333 Sum_probs=175.0
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ .+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 64 (213)
T TIGR01277 2 ALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTG 64 (213)
T ss_pred eEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEccc
Confidence 5788887663 13579999999999999999999999999999999876 358999999987643
Q ss_pred -ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 -STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 -~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
...++.++|++|++.+++.+|+.||+.+...... . ...+.+++++++++.+|+.+..++.+. .||||||||
T Consensus 65 ~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 136 (213)
T TIGR01277 65 LAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLPE-----QLSGGQRQR 136 (213)
T ss_pred CChhccceEEEeccCccCCCCcHHHHHHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCcc-----cCCHHHHHH
Confidence 2345679999999999999999999987543211 1 112234567889999999887777765 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
++|||+|+.+|++++|||||+|||..++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |+++..|.
T Consensus 137 l~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 137 VALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 99999999999999999999999999999999999998764 899999999975 56678999999985 78887764
No 203
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-36 Score=332.18 Aligned_cols=215 Identities=22% Similarity=0.310 Sum_probs=176.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC---CCCeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~---~~~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 578999998773 235899999999999999999999999999999999952 2212479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL----RHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ....+...+.++++++.+++.+. .+..+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 144 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKESA-- 144 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhCCc--
Confidence 87642 234567999999988886 699999988654331 11223345668889999998642 33333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 145 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14245 145 ---FALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY 219 (250)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 3599999999999999999999999999999999999999999999985 4899999999985 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 220 ~-G~~~~~~~~ 229 (250)
T PRK14245 220 M-GEMVEYDDT 229 (250)
T ss_pred C-CEEEEECCH
Confidence 5 789999875
No 204
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.9e-36 Score=335.51 Aligned_cols=216 Identities=26% Similarity=0.385 Sum_probs=179.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 57889988773 2368999999999999999999999999999999999866 35799999998754
Q ss_pred c---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 730 Q---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 730 ~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
. ...++.++|++|++.+++.+||+||+.+....... .....++..+++.++++.+++.+..++.++ .||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMS-----TLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHH
Confidence 3 23355789999998778889999999875311000 011122334568899999999887777765 49999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999777899999999985 57789999999985 7888888
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 75
No 205
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.3e-36 Score=325.36 Aligned_cols=189 Identities=23% Similarity=0.395 Sum_probs=162.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC---c----ccccceEEEEcCCCCCC
Q 000860 675 LQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE---Q----STFARISGYVEQEDVHS 747 (1250)
Q Consensus 675 ~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~---~----~~~~~~~~yv~q~~~~~ 747 (1250)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 458999999999999999999999999999999999876 35899999998743 1 12456799999999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000860 748 PQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDE 827 (1250)
Q Consensus 748 ~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDE 827 (1250)
+.+|++||+.+..... .....+..++++++++.+++.+..++.+. .||||||||++|||+|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKIY-----ELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 22344456678899999999888777765 499999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeee
Q 000860 828 PTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 828 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
||+|||+.+...+.+.|+++.++|+|||+++|++. ....+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999974 45689998875
No 206
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-36 Score=334.11 Aligned_cols=216 Identities=25% Similarity=0.307 Sum_probs=177.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 689999998873 23589999999999999999999999999999999997643 13589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. ||.||+.+....+.. ..+..+..++++++++.+++.+ ..++.+
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 161 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEPG-- 161 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCCc--
Confidence 87642 2346679999999888875 999999987543311 1123344566888999999964 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|+
T Consensus 162 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 162 ---TGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 789999999975 5668899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 207
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=337.76 Aligned_cols=219 Identities=23% Similarity=0.335 Sum_probs=182.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++.... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 5899999998853110 013469999999999999999999999999999999999876 3589999999876
Q ss_pred Cc----ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 729 EQ----STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. ...++.+||++|++. .+...||.|++.|..... ..+..+.+++++++++.+||.+..++.++. ||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAPHL-----LS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCccc-----CC
Confidence 43 234678999999974 233569999998875432 234455567789999999999888887754 99
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999986 344 5999999985 7888
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
..|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 88876
No 208
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.3e-35 Score=368.17 Aligned_cols=123 Identities=24% Similarity=0.335 Sum_probs=103.2
Q ss_pred CCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCC---cEEE
Q 000860 749 QVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGSFGLSTEQRKRLTIAVELVANP---SIIF 824 (1250)
Q Consensus 749 ~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p---~il~ 824 (1250)
.+||.|++.|...+. . . ....+.++.+||.. ..+..+. .||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~-----i-~~~l~~L~~vgL~~l~l~~~~~-----tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K-----I-ARKLQTLVDVGLGYIKLGQPAT-----TLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h-----h-hHHHHHHHHCCCCcccccCCcc-----cCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988876542 1 1 22467889999986 3555554 49999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee-----cCcEEEEeCCC
Q 000860 825 MDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK-----RGGRVIYGGKL 887 (1250)
Q Consensus 825 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-----~gg~~~~~g~~ 887 (1250)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|+++.|. +||++++.|++
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999878999999999974 457899999994 47899999986
No 209
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-36 Score=323.17 Aligned_cols=224 Identities=24% Similarity=0.332 Sum_probs=184.4
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-C-C-eeEEEEEECCc
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT-G-G-YIEGDIKISGY 726 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~-~-~-~~~G~i~~~g~ 726 (1250)
++++||+.++.... +..++++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 57889988776431 24579999999999999999999999999999999999765 2 2 46789999999
Q ss_pred cCCc---c---c-ccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHHcCCcccccccccC
Q 000860 727 PKEQ---S---T-FARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEI-SKDQRHEFVEEVMSLVELDSLRHALVGS 796 (1250)
Q Consensus 727 ~~~~---~---~-~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~-~~~~~~~~v~~~l~~l~l~~~~~~~v~~ 796 (1250)
++.. + . +.+.|+|++|++ .+.|.+||.+.+.-....+. .. ++++..+++.++++.+||.+-.... +
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~--~ 148 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRL--K 148 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHH--h
Confidence 7432 2 1 235799999996 57899999998876655432 22 4566778899999999998643222 2
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
..+..|||||||||.||.||+.+|++||.||||++||...+.+|++.|+++.+ .|.++|++|||.. -+.+.+|||+||
T Consensus 149 ~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VM 227 (316)
T COG0444 149 SYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVM 227 (316)
T ss_pred hCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEE
Confidence 23346999999999999999999999999999999999999999999999976 5999999999986 488999999999
Q ss_pred ecCcEEEEeCCCC
Q 000860 876 KRGGRVIYGGKLG 888 (1250)
Q Consensus 876 ~~gg~~~~~g~~~ 888 (1250)
.. |++++.|+..
T Consensus 228 Ya-G~iVE~g~~~ 239 (316)
T COG0444 228 YA-GRIVEEGPVE 239 (316)
T ss_pred EC-cEEEEeCCHH
Confidence 85 8999999973
No 210
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-36 Score=318.92 Aligned_cols=180 Identities=28% Similarity=0.441 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------c-cceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------V-QRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+|||||||||||++|.|+..|+ +|.|.++|.++.... + ++.+|||+|+..++|++||+||+..++.
T Consensus 33 ~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~ 109 (226)
T COG1136 33 FVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLL 109 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHH
Confidence 48999999999999999999999875 999999998885432 2 4669999999999999999999998765
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccc-cccCCCccccCccccch
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSD-TVVGSEMLRGVSGGQKK 152 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-t~vg~~~~~~LSGGqkq 152 (1250)
..+.... ..++.++.+++.+||.+..+ ..+.+ |||||||
T Consensus 110 ~~~~~~~-----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p~e-----LSGGqqQ 149 (226)
T COG1136 110 IAGKSAG-----------------------------------RRKRAAEELLEVLGLEDRLLKKKPSE-----LSGGQQQ 149 (226)
T ss_pred HcCCChh-----------------------------------HHHHHHHHHHHhcCChhhhccCCchh-----cCHHHHH
Confidence 5432210 00123667889999987655 55544 9999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeE
Q 000860 153 RVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYL 225 (1250)
Q Consensus 153 Rv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i 225 (1250)
||+|||||+.+|++++.||||.+||+.++..|++.+++++++.|+|+|+++|. .++...|||++.|.+|++
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd--~~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHD--PELAKYADRVIELKDGKI 220 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCC--HHHHHhCCEEEEEeCCee
Confidence 99999999999999999999999999999999999999998888899988654 578889999999999994
No 211
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-36 Score=331.14 Aligned_cols=216 Identities=23% Similarity=0.307 Sum_probs=176.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-CeeEEEEEECCcc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~-~~~~G~i~~~g~~ 727 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+
T Consensus 2 ~~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~ 68 (246)
T PRK14269 2 IAKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKD 68 (246)
T ss_pred ceeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEe
Confidence 467889998873 23589999999999999999999999999999999997532 2458999999987
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCCC
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGSPGSF 800 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~~~~~ 800 (1250)
+.. ..+++.++|++|++.+++ .||+||+.+....+... ...+..+++++++++.+++.. ..+..+ +
T Consensus 69 i~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~ 141 (246)
T PRK14269 69 VKNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLKQNA-----L 141 (246)
T ss_pred cccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhcCCc-----c
Confidence 643 234667999999998887 69999998875433110 012344556788999999953 233333 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++...+|++++|++ |+
T Consensus 142 ~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~ 218 (246)
T PRK14269 142 ALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GE 218 (246)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CE
Confidence 5999999999999999999999999999999999999999999999864 899999999985 57788999999985 78
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
++..|+.
T Consensus 219 i~~~g~~ 225 (246)
T PRK14269 219 LIEFGES 225 (246)
T ss_pred EEEECCH
Confidence 8888875
No 212
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=337.11 Aligned_cols=217 Identities=24% Similarity=0.341 Sum_probs=182.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe-eEEEEEECCcc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY-IEGDIKISGYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~-~~G~i~~~g~~ 727 (1250)
.++++|+++.++. .++++|+|+|++|++||+++|+||||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 5899999988742 12358999999999999999999999999999999999865321 13899999998
Q ss_pred CCc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 728 KEQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
+.. ...++.+||++|++. .++..||+||+.|..... ..+.++..++++++++.++|.+..++.+. .||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEPA-----NLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCcc-----cCC
Confidence 653 234567999999974 567899999998764322 23455666778999999999988777764 599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++ ..+|++++|.+ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999985 34 57999999985 7888
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
..|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 88875
No 213
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=323.67 Aligned_cols=193 Identities=30% Similarity=0.423 Sum_probs=161.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccc---cccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQT---DNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~---~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||+|+|+|+++|. +|+|.+.|.+.+....+..||||||. |.-|| .||+|.+..+..-+..
T Consensus 32 ~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g 107 (254)
T COG1121 32 ITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKG 107 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cCHHHHHHccCccccc
Confidence 58999999999999999999999865 99999999987665556789999995 34454 7999999886322110
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
-.. ... ...++.++++|+.+|+.+.+|..+|+ |||||+|||-||
T Consensus 108 ~~~------~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~-----LSGGQ~QRV~lA 151 (254)
T COG1121 108 WFR------RLN-------------------------KKDKEKVDEALERVGMEDLRDRQIGE-----LSGGQKQRVLLA 151 (254)
T ss_pred ccc------ccc-------------------------HHHHHHHHHHHHHcCchhhhCCcccc-----cCcHHHHHHHHH
Confidence 000 000 01123488999999999999999987 999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|||+++|++|+|||||+|+|+.++..+.+.|+++.++ |+||+++ +|+...+.++||+|+.|+ +++.+.|+++++.+
T Consensus 152 RAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~v-tHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 152 RALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMV-THDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred HHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEE-eCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 9999999999999999999999999999999999887 8998886 678899999999999995 66789999988643
No 214
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=332.74 Aligned_cols=221 Identities=23% Similarity=0.280 Sum_probs=179.3
Q ss_pred CeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEE
Q 000860 647 PLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKI 723 (1250)
Q Consensus 647 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~ 723 (1250)
...++++|+++.++ ++++|+|+|+++++||+++|+|||||||||||++|+|..++ .+.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (267)
T PRK14237 18 EIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILY 84 (267)
T ss_pred CeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEE
Confidence 34689999998873 24689999999999999999999999999999999997642 146899999
Q ss_pred CCccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000860 724 SGYPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPG 798 (1250)
Q Consensus 724 ~g~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~ 798 (1250)
+|.++.. ...++.++|++|++.+++ .||+||+.+..... ....+++.++++.++++.++|.+..+.... ..
T Consensus 85 ~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~ 160 (267)
T PRK14237 85 RGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH-KS 160 (267)
T ss_pred CCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc-CC
Confidence 9987642 134667999999988887 69999998865322 112334455678889999998532211111 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.+|++++|++
T Consensus 161 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~- 237 (267)
T PRK14237 161 ALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL- 237 (267)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC-
Confidence 24699999999999999999999999999999999999999999999985 4799999999985 57789999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 238 G~i~~~g~~ 246 (267)
T PRK14237 238 GDLIEYDKT 246 (267)
T ss_pred CEEEEeCCH
Confidence 789888885
No 215
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-35 Score=340.54 Aligned_cols=224 Identities=21% Similarity=0.304 Sum_probs=183.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeEEEEEECCcc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~~~G~i~~~g~~ 727 (1250)
.++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 58999999887532 12346999999999999999999999999999999999976532 237999999998
Q ss_pred CCc---cc---cc-ceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000860 728 KEQ---ST---FA-RISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPG 798 (1250)
Q Consensus 728 ~~~---~~---~~-~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~ 798 (1250)
+.. .. ++ +.++||+|++ .+.|.+|+.+++........ ..+.++..+++.++++.++|.+..+. . +..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~-~-~~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKR-M-KMY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHH-h-cCC
Confidence 643 11 22 4799999998 67899999999877654331 23455666788999999999753322 1 122
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
+..||||||||++|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|+|++|||+. .+...+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 3569999999999999999999999999999999999999999999999765 899999999975 46678999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 799999986
No 216
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=338.96 Aligned_cols=219 Identities=23% Similarity=0.325 Sum_probs=178.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 589999999874210 001358999999999999999999999999999999999876 3579999999875
Q ss_pred Cc--------ccccceEEEEcCCCCC-CCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000860 729 EQ--------STFARISGYVEQEDVH-SPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~--------~~~~~~~~yv~q~~~~-~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~ 798 (1250)
.. ..+++.++|++|++.. +...||+||+.+..... ....++..++++++++.++|. +..++.++
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~--- 149 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSPF--- 149 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCChh---
Confidence 31 2345679999999732 22469999998865322 223444556788899999994 56666664
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 150 --~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 150 --ELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred --hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 49999999999999999999999999999999999999999999998764 899999999985 57789999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 788888875
No 217
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=366.74 Aligned_cols=221 Identities=24% Similarity=0.331 Sum_probs=186.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+|+|+|..++++.+|+|.++|.++
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 589999998873 2369999999999999999999999999999999999876433589999999876
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
... ..++.+|||+|++.+++.+||+||+.+....+.....+.++..++++++++.+++.+..++.+++ |||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGN-----LGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhh-----CCH
Confidence 432 12466999999998899999999998865432111123344556789999999998888887754 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++...+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999975 56778999999985 788888
Q ss_pred CCCCc
Q 000860 885 GKLGV 889 (1250)
Q Consensus 885 g~~~~ 889 (1250)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88754
No 218
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=334.54 Aligned_cols=219 Identities=24% Similarity=0.359 Sum_probs=178.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC------eeEEEEEE
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG------YIEGDIKI 723 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~------~~~G~i~~ 723 (1250)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 67889998763 246899999999999999999999999999999999976532 12799999
Q ss_pred CCccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 724 SGYPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 724 ~g~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
+|.+... ..+++.++|++|++..++.+||+||+.+....... ......+.+++++++++.+++.+..++.++
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 144 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVT---- 144 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcc----
Confidence 9987642 23456689999998766679999999875321110 011112345668899999999887776664
Q ss_pred CcCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhh
Q 000860 800 FGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAF 869 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~---------~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~ 869 (1250)
.||||||||++|||+|+ .+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++...+
T Consensus 145 -~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 145 -TLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred -cCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 49999999999999999 599999999999999999999999999998765 899999999985 577789
Q ss_pred cceeeeecCcEEEEeCCCC
Q 000860 870 DELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 870 d~v~~l~~gg~~~~~g~~~ 888 (1250)
|++++|.+ |++++.|+.+
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7888888763
No 219
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.5e-36 Score=328.87 Aligned_cols=198 Identities=26% Similarity=0.386 Sum_probs=168.2
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHH
Q 000860 678 LSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVTIEESLW 757 (1250)
Q Consensus 678 L~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~ 757 (1250)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+||+||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 35899999998764322 22489999999999999999998
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000860 758 FSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 837 (1250)
Q Consensus 758 ~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~ 837 (1250)
+......+ ..++++.+++++++++.+++.+..++.++ .||||||||++|||+|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRPG-----QLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 86421111 23344555678899999999887777765 4999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 838 AIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 838 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999985 57788999999985 788887764
No 220
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.3e-34 Score=377.33 Aligned_cols=135 Identities=23% Similarity=0.294 Sum_probs=108.9
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHh---hCCc
Q 000860 746 HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGSFGLSTEQRKRLTIAVELV---ANPS 821 (1250)
Q Consensus 746 ~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~~~lSgGerqr~~ia~~l~---~~p~ 821 (1250)
.+...||.|+|.+...-........++.++++ ++++.+||.+. .+..+. .||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~-----tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLS-----SLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccc-----cCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45678999999877542211112234455566 47889999875 566664 49999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee-----cCcEEEEeCCCC
Q 000860 822 IIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK-----RGGRVIYGGKLG 888 (1250)
Q Consensus 822 il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-----~gg~~~~~g~~~ 888 (1250)
+++|||||+|||+.+...+++.|+++++.|.|||+++|++. .+ ..+|++++|. ++|+++..|+++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999975 34 8999999995 358999999874
No 221
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=330.57 Aligned_cols=216 Identities=22% Similarity=0.309 Sum_probs=178.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~~-~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478999998873 2358999999999999999999999999999999999754 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++.+|++||+.+..... ...+..+.+++++++++.+++.. ..++.+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLN--GRVNRSEADEIVESSLKRVALWDEVKDRLKSNA-- 146 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCc--
Confidence 87632 234677999999999999999999998764432 11223344566888999999864 223333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|.
T Consensus 147 ---~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14256 147 ---MELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY 221 (252)
T ss_pred ---CcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999975 689999999985 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14256 222 M-GDLVECGET 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 222
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-36 Score=330.46 Aligned_cols=209 Identities=26% Similarity=0.368 Sum_probs=175.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 578999998773 2358999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.++|++|++.+++ .||+||+.+....+ . ...++++++++.+++. +..++.+. .|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~~~-----~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRDVK-----NLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCCcc-----cCCH
Confidence 42 234567999999988876 69999987653321 1 1134578899999996 45565554 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999985 56778999999985 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 7775
No 223
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=341.16 Aligned_cols=223 Identities=16% Similarity=0.243 Sum_probs=179.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CeeEEEEEECCc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--GYIEGDIKISGY 726 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~--~~~~G~i~~~g~ 726 (1250)
.++++|+++.|... .+...+|+|||++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 47899999988532 1234699999999999999999999999999999999997642 245799999998
Q ss_pred cCCc---cc----ccceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHHHHcCCccc---cc
Q 000860 727 PKEQ---ST----FARISGYVEQEDV--HSPQVTIEESLWFSANLRLPKE---ISKDQRHEFVEEVMSLVELDSL---RH 791 (1250)
Q Consensus 727 ~~~~---~~----~~~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~---~~~~~~~~~v~~~l~~l~l~~~---~~ 791 (1250)
++.. .. .++.++||+|++. +.|.+||.+++.+......... ....+.++++.++++.+||.+. .+
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 7642 11 1346999999975 6788999999976432110000 1123445678899999999753 34
Q ss_pred ccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhc
Q 000860 792 ALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFD 870 (1250)
Q Consensus 792 ~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d 870 (1250)
+.+ ..|||||||||+||+||+.+|+||++||||+|||+.++..+++.|+++.++ |.|||++||+.+ .+...+|
T Consensus 154 ~~p-----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SFP-----YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CCc-----hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 444 359999999999999999999999999999999999999999999999764 899999999975 5678899
Q ss_pred ceeeeecCcEEEEeCCC
Q 000860 871 ELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 871 ~v~~l~~gg~~~~~g~~ 887 (1250)
++++|.+ |++++.|+.
T Consensus 228 ri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 228 KINVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEEC-CEEEEECCH
Confidence 9999985 899999885
No 224
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=333.58 Aligned_cols=214 Identities=23% Similarity=0.297 Sum_probs=175.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 689999998873 23589999999999999999999999999999999997542 13589999999
Q ss_pred ccCC-----cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKE-----QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~-----~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++. ...+++.++|++|++.+++ .||+||+.+....+ ... .+.++.++++++.+++. +..++.+
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~---~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 152 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARIN---GYT-GDMDELVERSLRKAAVWDECKDKLNESG-- 152 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhc---CCc-HHHHHHHHHHHHHhCCcchhhhhhCCCc--
Confidence 8753 1234567999999998887 49999998876433 112 22345567788888774 2334443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|+
T Consensus 153 ---~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 153 ---YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 35999999999999999999999999999999999999999999999854 799999999985 5788999999998
Q ss_pred c----------CcEEEEeCCC
Q 000860 877 R----------GGRVIYGGKL 887 (1250)
Q Consensus 877 ~----------gg~~~~~g~~ 887 (1250)
+ +|++++.|++
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 5 2578888875
No 225
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=326.55 Aligned_cols=211 Identities=27% Similarity=0.374 Sum_probs=179.2
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.+. + ++|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~ 65 (235)
T cd03299 2 KVENLSKDWK-------------E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITN 65 (235)
T ss_pred eeEeEEEEeC-------------C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCc
Confidence 5677777652 1 27999999999999999999999999999999999866 457999999987643
Q ss_pred -ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 731 -STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 731 -~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
...++.++|++|++.+++.+|+.||+.+..... ..+..+..+.+.++++.++|.+..++.+. .||||||||
T Consensus 66 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 137 (235)
T cd03299 66 LPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKPE-----TLSGGEQQR 137 (235)
T ss_pred CChhHcCEEEEeecCccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCcc-----cCCHHHHHH
Confidence 123567999999999999999999998765332 22344455667889999999888887775 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 138 l~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 138 VAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998764 899999999984 56778999999985 788888875
No 226
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.5e-35 Score=315.61 Aligned_cols=190 Identities=53% Similarity=0.891 Sum_probs=162.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCeeEEEEEECCc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRK--TGGYIEGDIKISGY 726 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~--~~~~~~G~i~~~g~ 726 (1250)
.++++|+++.++.... ...+++|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 5789999998853100 01246999999999999999999999999999999999986 5 46899999999
Q ss_pred cCCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 727 PKEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 727 ~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8755455678999999999899999999997643210 399999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986557788999999986 7877654
No 227
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-36 Score=344.92 Aligned_cols=190 Identities=24% Similarity=0.387 Sum_probs=167.4
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 000860 680 NVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQEDVHSPQVTI 752 (1250)
Q Consensus 680 ~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~yv~q~~~~~~~ltv 752 (1250)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 358999999987532 1245789999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000860 753 EESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 832 (1250)
Q Consensus 753 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgL 832 (1250)
+||+.|... ...+++++++++.+||.+..++.++ .||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYPG-----SLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987632 1123568899999999988888775 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 833 DARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 833 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|+.++..+.+.|++++++ |+|+|++||++. ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999985 68889999999985 789888886
No 228
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=326.54 Aligned_cols=211 Identities=23% Similarity=0.355 Sum_probs=177.2
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. + ..|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 678999988742 1 138999999999999999999999999999999876 45799999998764
Q ss_pred cc-cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 730 QS-TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 730 ~~-~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
.. ..++.++|++|++.+++.+|+.||+.+...... .. .+..+++++++++.+|+.+..++.+.. |||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLPGQ-----LSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhccccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCccc-----CCHHHHH
Confidence 32 234579999999999999999999987532111 11 223456689999999999888887754 9999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|++|||+++.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999985 56778999999985 788888875
No 229
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=328.99 Aligned_cols=215 Identities=24% Similarity=0.276 Sum_probs=177.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 578999998773 235899999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ...++.++|++|++.+++ .|++||+.+...... ....++.+++++++++.+++.+ ..+..+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 145 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKSA-- 145 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCCc--
Confidence 87642 134567999999998887 899999988754321 1123344566788999998742 334433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|+|++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 146 ---LKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 35999999999999999999999999999999999999999999999876 689999999985 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 788888875
No 230
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.4e-35 Score=332.42 Aligned_cols=224 Identities=21% Similarity=0.297 Sum_probs=181.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++++..+.. +.+.+.+++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 4899999998852110 000113469999999999999999999999999999999999876 3589999999876
Q ss_pred Cc---ccccceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcC
Q 000860 729 EQ---STFARISGYVEQEDV--HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSFGL 802 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~~l 802 (1250)
.. ...++.++|++|++. +++.+||.+++.+...... .....+..+.++++++.+++. +..+..+. .|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYPH-----ML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCch-----hc
Confidence 42 123456999999975 5678899999987654431 123344556788999999994 55666554 49
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998764 899999999985 57778999999985 788
Q ss_pred EEeCCC
Q 000860 882 IYGGKL 887 (1250)
Q Consensus 882 ~~~g~~ 887 (1250)
+..|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 888775
No 231
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-36 Score=343.14 Aligned_cols=212 Identities=24% Similarity=0.416 Sum_probs=179.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+.. +.++|+|+|+++++||.+||+|+||||||||++.|+|..+ +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999999753 4579999999999999999999999999999999999766 4589999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLR-------HALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~v~~~~ 798 (1250)
.. ..+++.+++++|...+| ..|+|+||..+. | +.++++ +.++++++||++.. |+.+|+.
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~----~-~AsDEe----l~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN----P-DASDEE----LWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC----C-CCCHHH----HHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 34677899999998777 469999998753 1 344443 56788888887654 4456654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
++.||||||||++|||+|++|.++++|||||.|||+.|++++++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 467999999999999999999999999999999999999999999988764 999999999975 4688999999985
Q ss_pred cEEEEeCCCC
Q 000860 879 GRVIYGGKLG 888 (1250)
Q Consensus 879 g~~~~~g~~~ 888 (1250)
|+++..|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 7999998863
No 232
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.3e-35 Score=344.56 Aligned_cols=194 Identities=26% Similarity=0.413 Sum_probs=169.7
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 000860 680 NVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQEDVHSPQVTI 752 (1250)
Q Consensus 680 ~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~yv~q~~~~~~~ltv 752 (1250)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 357999999987532 1345679999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000860 753 EESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 832 (1250)
Q Consensus 753 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgL 832 (1250)
+||+.|+.... ...+.+++++++++.++|.+..++.+.. ||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLPGR-----LSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCChhh-----CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999875421 1233456789999999999888887754 9999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 833 DARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 833 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999998765 899999999985 57788999999985 788888875
No 233
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=332.68 Aligned_cols=216 Identities=25% Similarity=0.353 Sum_probs=181.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++.. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 58899999987421 12358999999999999999999999999999999999876 4579999999876
Q ss_pred Cc---ccccceEEEEcCCCC-CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDV-HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~-~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++..++++++++.++|.+..++.+. .|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREPA-----RLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCH
Confidence 43 234677999999974 577789999998765422 23344555678999999999888777664 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 999999999985 34 46999999986 78888
Q ss_pred eCCC
Q 000860 884 GGKL 887 (1250)
Q Consensus 884 ~g~~ 887 (1250)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 234
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=321.85 Aligned_cols=191 Identities=27% Similarity=0.391 Sum_probs=163.7
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 000860 680 NVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQEDVHSPQVTI 752 (1250)
Q Consensus 680 ~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~yv~q~~~~~~~ltv 752 (1250)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999875 358999999987531 1245679999999999989999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000860 753 EESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 832 (1250)
Q Consensus 753 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgL 832 (1250)
+||+.+..... .....+++++++++.+++.+..++.++ .||||||||++||++|+.+|++++|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYPA-----QLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998765321 223345668899999999877777665 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 833 DARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 833 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999975 46678999999985 7877654
No 235
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=329.71 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=176.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~~-~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|++|++||+++|+||||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 589999998773 2358999999999999999999999999999999999754 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL----RHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~v~~ 796 (1250)
.++.. ...++.+||++|++.+++. ||+||+.+....+. ...+++.+++++++++.+++.+. .++.+
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~-- 153 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQA-- 153 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCCc--
Confidence 87632 2345679999999888875 99999988654321 11234445667888999988542 33333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 154 ---~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 154 ---LSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 799999999985 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 5 799988875
No 236
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=328.82 Aligned_cols=215 Identities=27% Similarity=0.326 Sum_probs=175.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~~-~~~G~i~~~g 725 (1250)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999998873 2358999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+....+ . ....+..++.++++++.+++.. ..+..+
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLK-G-IKDKQVLDEAVEKSLKGASIWDEVKDRLHDSA-- 146 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHc-C-CCcHHHHHHHHHHHHHHcCCchhHHHHHhcCc--
Confidence 87632 234567999999988887 89999998875432 1 1123334566788899988743 234443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++...+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 147 ---LGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 689999999975 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 237
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=318.46 Aligned_cols=200 Identities=24% Similarity=0.315 Sum_probs=182.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc---c---c-ccceEEEEcCCCCCCCC
Q 000860 677 LLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---S---T-FARISGYVEQEDVHSPQ 749 (1250)
Q Consensus 677 iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~---~-~~~~~~yv~q~~~~~~~ 749 (1250)
-++|+|++|+.||+..|||-||||||||+++|.+... +..|+|.++|.++.. . . .++.+++|+|...++|+
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPh 120 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPH 120 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccc
Confidence 4899999999999999999999999999999999877 468999999998643 1 2 34579999999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000860 750 VTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPT 829 (1250)
Q Consensus 750 ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPT 829 (1250)
.||.||..|+..++ +.+++++++++.++++..||+...+..+.. ||||+||||.|||||+.+|+||++|||+
T Consensus 121 rtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp~e-----LSGGMqQRVGLARAla~~~~IlLMDEaF 192 (386)
T COG4175 121 RTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYPNE-----LSGGMQQRVGLARALANDPDILLMDEAF 192 (386)
T ss_pred hhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCccc-----ccchHHHHHHHHHHHccCCCEEEecCch
Confidence 99999999998776 678899999999999999999999998864 9999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 830 SGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 830 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
|+|||--+.++++-|.++.++ ++|||++|||.. |.++.-|||.+|. +|+++..|+++
T Consensus 193 SALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 193 SALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred hhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 999999999999999888554 899999999986 7899999999997 58999999984
No 238
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=336.60 Aligned_cols=220 Identities=21% Similarity=0.277 Sum_probs=178.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~~g 725 (1250)
.++++|+++.+.. +.+++|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.+||
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 6899999998842 124689999999999999999999999999999999997532 23579999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHH-HHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKD-QRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~-~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
.++.. ..+++.++||||++.+++ .|++||+.|..... ..+++ ..++.++++++.++|.+..++.++. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98752 235678999999998875 79999999864322 22222 2344567888888875433333433 23
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|+|++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 46999999999999999999999999999999999999999999999875 799999999974 46677999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
+++..|++
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999886
No 239
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=327.39 Aligned_cols=215 Identities=23% Similarity=0.326 Sum_probs=175.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478999998873 235899999999999999999999999999999999964321 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+.++.++.++++++.+++.+ ..++.+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 144 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKSA-- 144 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcCC--
Confidence 87642 234667999999988887 899999998754321 1123344567888888888742 334444
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++...+|++++|+
T Consensus 145 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 145 ---LGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred ---CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999854 899999999974 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 788888774
No 240
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-35 Score=320.26 Aligned_cols=202 Identities=23% Similarity=0.340 Sum_probs=173.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+++++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 589999998763 2358999999999999999999999999999999999876 3579999999876
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
.....++.++|++|++.+++.+|++||+.+....+ .. ..++.++++++.++|.+..++.++ .|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~---~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLH---GR---RAKQMPGSALAIVGLAGYEDTLVR-----QLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhc---CC---cHHHHHHHHHHHcCChhhccCChh-----hCCHHHHH
Confidence 54334556899999998888899999998865432 11 123456788999999887777765 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
|++|||+++.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999985 68889999999863
No 241
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=327.90 Aligned_cols=219 Identities=22% Similarity=0.332 Sum_probs=174.8
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeEEEEEECCc
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISGY 726 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~~-~~~G~i~~~g~ 726 (1250)
-+++|+++.++ ++++|+|+||++++||+++|+||||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 46788888763 2468999999999999999999999999999999999754 11 35899999998
Q ss_pred cCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 727 PKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 727 ~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
++.. ..+++.++|++|++.+++. ||+||+.+....+. .....++.++.++++++.+++.+...+.... ....
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1346679999999888875 99999988643321 1112234455678899999996522111111 1245
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999985 56778999999986 788
Q ss_pred EEeCCC
Q 000860 882 IYGGKL 887 (1250)
Q Consensus 882 ~~~g~~ 887 (1250)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 888875
No 242
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=328.37 Aligned_cols=216 Identities=23% Similarity=0.310 Sum_probs=177.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-e--eEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-Y--IEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~-~--~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 588999998873 235899999999999999999999999999999999976532 2 479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ..++.+..+.++++++.+++. +..++.+
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 148 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKSA-- 148 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCCc--
Confidence 87632 234567999999998887 899999988654321 123334456678889988884 2334433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 149 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 149 ---LGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 35999999999999999999999999999999999999999999999865 699999999985 6788999999997
Q ss_pred c----CcEEEEeCCC
Q 000860 877 R----GGRVIYGGKL 887 (1250)
Q Consensus 877 ~----gg~~~~~g~~ 887 (1250)
+ .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999886
No 243
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=327.11 Aligned_cols=216 Identities=24% Similarity=0.299 Sum_probs=176.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe---eEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY---IEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~---~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 578899998773 2358999999999999999999999999999999999765322 379999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++.+|+.||+.+..... .....++..+.++++++.+++. +..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 146 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLA--GIRDRDHLMEVAERSLRGAALWDEVKDRLKTPA-- 146 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCc--
Confidence 87642 234567999999999999999999998765422 1112333455667777777653 3334444
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 147 ---TGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999864 799999999985 5777899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 244
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=326.59 Aligned_cols=215 Identities=27% Similarity=0.345 Sum_probs=176.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478999998773 235899999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL----RHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~v~~ 796 (1250)
.++.. ...++.++|++|++.+++ .||+||+.+...... ....+..++.++++++.+++.+. .+..+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 144 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKPG-- 144 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCCh--
Confidence 87542 234567999999998887 899999988654321 11233445567888899888542 33333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|+
T Consensus 145 ---~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~ 219 (250)
T PRK14262 145 ---TRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMY 219 (250)
T ss_pred ---hhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 45999999999999999999999999999999999999999999999865 799999999975 4778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 220 ~-G~i~~~g~~ 229 (250)
T PRK14262 220 R-GELIEYGPT 229 (250)
T ss_pred C-CEEEEecCH
Confidence 6 788888875
No 245
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-35 Score=328.94 Aligned_cols=215 Identities=26% Similarity=0.342 Sum_probs=177.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~~g 725 (1250)
.++++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 589999999873 23589999999999999999999999999999999997642 13589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. ||+||+.+..... .....+..++.++++++.+++.+ ..+..+
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 166 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQ--GINNRRVLDEAVERSLRGAALWDEVKDRLHENA-- 166 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCc--
Confidence 87642 2346789999999988876 9999998765432 11122334466888899988863 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 167 ---~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 167 ---FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred ---ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999975 799999999985 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 242 ~-G~i~~~g~~ 251 (272)
T PRK14236 242 M-GKLVEYGDT 251 (272)
T ss_pred C-CEEEecCCH
Confidence 5 788888875
No 246
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=6.5e-35 Score=320.50 Aligned_cols=173 Identities=25% Similarity=0.327 Sum_probs=133.8
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHH
Q 000860 678 LSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVTIEESLW 757 (1250)
Q Consensus 678 L~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~ 757 (1250)
|.==.+++..||+++++||||-||||+.++|+|..++ .+|+ .. .-.++|=||--.--...||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 3334567888999999999999999999999997763 3454 11 123677787644345789999765
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000860 758 FSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 837 (1250)
Q Consensus 758 ~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~ 837 (1250)
-...-+... .-...++.+-|+|+...+..+.+ |||||.|||+||.+|.+++++.+||||++.||++.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v~~-----LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPVDE-----LSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccccc-----CCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 433221111 11235788889999999988864 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeee
Q 000860 838 AIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 838 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..+.+.||+.... ++|.+++-||... +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998754 7899999999643 334567777774
No 247
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-35 Score=326.65 Aligned_cols=215 Identities=25% Similarity=0.299 Sum_probs=176.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 478899998773 245899999999999999999999999999999999976531 3579999999
Q ss_pred ccCCc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000860 726 YPKEQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGSP 797 (1250)
Q Consensus 726 ~~~~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~~ 797 (1250)
.++.. ...++.++|++|++.+++ .||.||+.+..... ....++..++++.++++.+++.+ ..++.+
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--- 143 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQ--GIKDKKVLDEVVERSLRGAALWDEVKDRLKSHA--- 143 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhc--CCCchHHHHHHHHHHHHHcCCchhhhHHhhcCc---
Confidence 87531 234667999999998887 89999998764332 11123344566778888888753 233333
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|++
T Consensus 144 --~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 144 --FGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 35999999999999999999999999999999999999999999999875 689999999985 57788999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 789888875
No 248
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=360.95 Aligned_cols=219 Identities=27% Similarity=0.372 Sum_probs=185.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++++ ++++|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 488999998873 2468999999999999999999999999999999999876 3579999999876
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
... ..++.++|++|++.+++.+||+|++.++...... ...+.++.+++++++++.+||.+..+..+++ ||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGE-----LS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhh-----CC
Confidence 421 1245799999999899999999999886432211 1122344456788999999999888887765 99
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. ++...+|++++|.+ |+++.
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIA 221 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999985 57789999999985 78888
Q ss_pred eCCCCc
Q 000860 884 GGKLGV 889 (1250)
Q Consensus 884 ~g~~~~ 889 (1250)
.|+...
T Consensus 222 ~~~~~~ 227 (501)
T PRK10762 222 EREVAD 227 (501)
T ss_pred ecCcCc
Confidence 888754
No 249
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.5e-35 Score=319.31 Aligned_cols=211 Identities=25% Similarity=0.414 Sum_probs=177.4
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.+... .+.+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5788999876421 112569999999999999999999999999999999999865 45899999998764
Q ss_pred cc------cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 730 QS------TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~------~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. ..++.++|++|++.+++.+|+.||+.+...... ..+.++..++++++++.+||.+..++.+. .||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYPH-----NLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCC
Confidence 21 245679999999999988999999998754321 13345556678999999999887777764 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999974 5689999999985 553
No 250
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.9e-36 Score=373.06 Aligned_cols=209 Identities=25% Similarity=0.414 Sum_probs=175.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+.. ++++|+|+|++++|||++||+||||||||||+++|+|.. + .+|+|.+||.++
T Consensus 349 ~i~~~~vsf~~~~------------~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSPD------------GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEeccC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 5899999975431 246899999999999999999999999999999999987 4 479999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-------SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~v~~~~ 798 (1250)
.+ ..+++.++||+|++.+|. .|++||+.++. | +.++++ ++++++..++. +-.||.+|+.+
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~----~-~~~~ee----i~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN----P-DASDEQ----LQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC----C-CCCHHH----HHHHHHHhCHHHHHHhcccccccccccCC
Confidence 53 467889999999999885 59999998752 1 234443 44555555543 34578888754
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
..||||||||++|||||+++|+||+||||||+||+++++.+++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~- 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD- 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999885 5899999999984 5788999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 799998874
No 251
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=327.40 Aligned_cols=219 Identities=24% Similarity=0.324 Sum_probs=178.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 689999999874 246899999999999999999999999999999999976531 3589999999
Q ss_pred ccCCc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 726 YPKEQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 726 ~~~~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+..... ...+.++.++++.++++.+++.+..++... .....
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234677999999998887 89999998764322 112344455567888999998753221111 12245
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 589999999975 57788999999985 799
Q ss_pred EEeCCC
Q 000860 882 IYGGKL 887 (1250)
Q Consensus 882 ~~~g~~ 887 (1250)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 888875
No 252
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-35 Score=330.23 Aligned_cols=203 Identities=20% Similarity=0.236 Sum_probs=153.4
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..+++.++++.|+.. +-+++.+++..++.-+..+++|+||+||||++|++.|...+ ..|-+.++
T Consensus 361 p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~--- 424 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRH--- 424 (582)
T ss_pred CeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeec---
Confidence 368888888876532 12688999999999999999999999999999999986542 34555443
Q ss_pred CCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHH
Q 000860 728 KEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 728 ~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~~~lSgGe 806 (1250)
-|.+++|..|..+-+-.+.|.+ +.+....+ | +.+++ .+++-+..+||+.- +... ..+|||||
T Consensus 425 -----~r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~-p-G~~~e----e~r~hl~~~Gl~g~la~~s-----i~~LSGGQ 487 (582)
T KOG0062|consen 425 -----PRLRIKYFAQHHVDFLDKNVNA-VDFMEKSF-P-GKTEE----EIRRHLGSFGLSGELALQS-----IASLSGGQ 487 (582)
T ss_pred -----ccceecchhHhhhhHHHHHhHH-HHHHHHhC-C-CCCHH----HHHHHHHhcCCCchhhhcc-----ccccCCcc
Confidence 3467899999865554555554 33444443 2 22333 35677888999753 2222 24699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGK 886 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~ 886 (1250)
|-||++|.....+|.+|+|||||+.||..+-..+.+.|+.. +..||+++|+.+ -+-..|+.+.+.++|...-+.|.
T Consensus 488 KsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 488 KSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred hhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeecc
Confidence 99999999999999999999999999999999999999875 568999999964 46778999999987655555555
Q ss_pred C
Q 000860 887 L 887 (1250)
Q Consensus 887 ~ 887 (1250)
.
T Consensus 564 ~ 564 (582)
T KOG0062|consen 564 I 564 (582)
T ss_pred H
Confidence 3
No 253
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.3e-35 Score=322.38 Aligned_cols=210 Identities=20% Similarity=0.311 Sum_probs=171.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 589999998763 2458999999999999999999999999999999999765 3589999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.++|++|++.+++ .||+||+.+....+. .. ..+++++++++.+++. ...++.++ .|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~---~~--~~~~~~~~~l~~~~l~~~~~~~~~~-----~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRN---QQ--PDPAIFLDDLERFALPDTILTKNIA-----ELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcC---CC--hHHHHHHHHHHHcCCChHHhcCCcc-----cCCH
Confidence 42 234567899999988886 599999987654321 11 1234578899999995 45566654 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ .|.|||+++|++. ++ ..+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999875 4899999999985 34 57999999964343444
Q ss_pred eCC
Q 000860 884 GGK 886 (1250)
Q Consensus 884 ~g~ 886 (1250)
.|.
T Consensus 219 ~~~ 221 (225)
T PRK10247 219 EAR 221 (225)
T ss_pred hhh
Confidence 443
No 254
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.5e-35 Score=323.49 Aligned_cols=201 Identities=24% Similarity=0.326 Sum_probs=167.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--eeEEEEEECCccCCcccc-cceEEEEcCCCC--CCCCCC
Q 000860 677 LLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG--YIEGDIKISGYPKEQSTF-ARISGYVEQEDV--HSPQVT 751 (1250)
Q Consensus 677 iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~--~~~G~i~~~g~~~~~~~~-~~~~~yv~q~~~--~~~~lt 751 (1250)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999987531 158999999988654323 357999999984 556789
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000860 752 IEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD---SLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEP 828 (1250)
Q Consensus 752 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~---~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEP 828 (1250)
+.|++.+..... .....+.+++++++++.+++. +..++.++ .||||||||++|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSL---GKLSKQARALILEALEAVGLPDPEEVLKKYPF-----QLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHc---CccHHHHHHHHHHHHHHcCCCchHHHHhCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 999997765332 112234456789999999997 34555554 4999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 829 TSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 829 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|+|||..+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999985 57788999999985 788888875
No 255
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.3e-35 Score=326.74 Aligned_cols=215 Identities=27% Similarity=0.307 Sum_probs=176.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc-
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~- 727 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 589999998773 2358999999999999999999999999999999999865 357999999987
Q ss_pred ----CCcc---c----ccceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000860 728 ----KEQS---T----FARISGYVEQEDV--HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHAL 793 (1250)
Q Consensus 728 ----~~~~---~----~~~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 793 (1250)
+... . .++.++|++|++. +.+.+|+.||+.+...... .....+.++.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2446999999973 5677899999876432111 1122344566889999999974 55665
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcce
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
+. .||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+...+|++
T Consensus 149 ~~-----~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 PT-----TFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred Cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 54 49999999999999999999999999999999999999999999998764 899999999974 466789999
Q ss_pred eeeecCcEEEEeCCC
Q 000860 873 LLMKRGGRVIYGGKL 887 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~ 887 (1250)
++|.+ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799988875
No 256
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=327.90 Aligned_cols=215 Identities=23% Similarity=0.309 Sum_probs=175.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~-~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 589999998873 2458999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++. +..++.++
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~- 163 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSSAL- 163 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcc-
Confidence 87642 1345679999999988875 99999987643221 112223345677888888885 23344443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 164 ----~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 164 ----SLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred ----cCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999999865 689999999975 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 257
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=325.57 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=178.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 589999998873 235899999999999999999999999999999999976532 1469999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL----RHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .|++||+.+...... ..+..+.++++.++++.+++.+. .++.+
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 148 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHKSA-- 148 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcCCc--
Confidence 87531 234567999999988887 899999988654321 11233445678889999988542 33333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|
T Consensus 149 ---~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l 224 (261)
T PRK14258 149 ---LDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFF 224 (261)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEE
Confidence 35999999999999999999999999999999999999999999999865 4899999999985 578899999999
Q ss_pred ecC----cEEEEeCCC
Q 000860 876 KRG----GRVIYGGKL 887 (1250)
Q Consensus 876 ~~g----g~~~~~g~~ 887 (1250)
+++ |++++.|+.
T Consensus 225 ~~~~~~~G~i~~~~~~ 240 (261)
T PRK14258 225 KGNENRIGQLVEFGLT 240 (261)
T ss_pred ccCCCcCceEEEeCCH
Confidence 853 789999886
No 258
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.9e-35 Score=325.33 Aligned_cols=213 Identities=22% Similarity=0.304 Sum_probs=174.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--eeEEEEEECCc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG--YIEGDIKISGY 726 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~--~~~G~i~~~g~ 726 (1250)
.++++|+++.++ +.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 689999998761 24899999999999999999999999999999999986531 15799999998
Q ss_pred cCCcccc-cceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCC
Q 000860 727 PKEQSTF-ARISGYVEQEDV--HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS---LRHALVGSPGSF 800 (1250)
Q Consensus 727 ~~~~~~~-~~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~v~~~~~~ 800 (1250)
++..... ++.++||+|++. +.+..|+.+++.+..... .... ..+++.++++.+++.+ ..++.++
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~----- 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLAL---GKPA--DDATLTAALEAVGLENAARVLKLYPF----- 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHc---CCCh--HHHHHHHHHHHcCCCChhhhhhcCCc-----
Confidence 8653332 357999999974 446689999887654322 1111 2356788999999976 3455543
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 59999999999999999999999999999999999999999999998764 899999999975 46678999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
+++..|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 89888875
No 259
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.8e-35 Score=315.80 Aligned_cols=195 Identities=28% Similarity=0.344 Sum_probs=167.0
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5788887763 2458999999999999999999999999999999999876 357999999987532
Q ss_pred --ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 731 --STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 731 --~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
..+++.++|++|++.+++.+||+||+.+.... . .+++++++++.+++.+..++.+. .|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPVA-----QLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCchh-----hCCHHHHH
Confidence 23566799999999888899999999875311 1 23457889999999887777664 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeee
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
|++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++|+|+|+++|++. +....+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999985 577788888776
No 260
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=329.67 Aligned_cols=215 Identities=23% Similarity=0.306 Sum_probs=175.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~-~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 589999998873 2358999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. ||.||+.+....+. ..+....++++.++++.+++. +..++.+
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 180 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHG--INDKKQLEEIVEKSLRKAALWDEVSDRLDKNA-- 180 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHhCCccchhhHhhCCh--
Confidence 87532 1346679999999988875 99999998754321 112233456677888888874 3334444
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 181 ---~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 181 ---LGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 689999999985 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 261
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=327.46 Aligned_cols=213 Identities=23% Similarity=0.325 Sum_probs=174.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~~g 725 (1250)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 589999998873 23589999999999999999999999999999999997642 13579999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. ||.||+.+....+. ... +..++++++++.+++.+ ..+..+
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~-- 178 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSSG-- 178 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCCc--
Confidence 87532 2346789999999888875 99999988754331 122 33456888999998853 334444
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhccee-ee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELL-LM 875 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~-~l 875 (1250)
..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++...+|+++ +|
T Consensus 179 ---~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 179 ---LDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 35999999999999999999999999999999999999999999999976 489999999975 5677899976 55
Q ss_pred ecCcEEEEeCCC
Q 000860 876 KRGGRVIYGGKL 887 (1250)
Q Consensus 876 ~~gg~~~~~g~~ 887 (1250)
. +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4788888774
No 262
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.3e-35 Score=316.28 Aligned_cols=199 Identities=24% Similarity=0.311 Sum_probs=166.3
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 57889988763 2358999999999999999999999999999999999876 35799999998754
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ..+++.++|++|++.+++.+||.|++.+....+. . ..+++++++++.+|+.+..++.++ .||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPVR-----QLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCChh-----hcCHHHH
Confidence 3 2345678999999988999999999988754321 1 223567889999999887777665 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeee
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
||++||++|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. .+-..-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999975 344433455444
No 263
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.5e-36 Score=371.44 Aligned_cols=214 Identities=29% Similarity=0.459 Sum_probs=178.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++|+|+++.|+. ++++|+|+|++++|||++||+||||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 328 ~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~dI 393 (567)
T COG1132 328 SIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGIDI 393 (567)
T ss_pred eEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEeh
Confidence 5899999999853 4579999999999999999999999999999999999876 3589999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHH-HH--HcCCcccccccccCCCCCcC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEV-MS--LVELDSLRHALVGSPGSFGL 802 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~-l~--~l~l~~~~~~~v~~~~~~~l 802 (1250)
+. ..+|+.++||+||+.+|. .||+||+.++.. +.++++..+.++.+ ++ ...+.+..||.+|+. +..|
T Consensus 394 ~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~-G~~L 466 (567)
T COG1132 394 RDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DATDEEIEEALKLANAHEFIANLPDGYDTIVGER-GVNL 466 (567)
T ss_pred hhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCcccccceecCC-CccC
Confidence 54 567899999999999987 799999988632 24555544443332 11 113344678999853 4579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
|||||||++||||+++||+||+||||||+||+.++..+++.++++. +++|+|+++|+++ ....+|+|++|++ |+++
T Consensus 467 SgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~-G~i~ 542 (567)
T COG1132 467 SGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN-GRIV 542 (567)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999876 5789999999985 4566999999986 7899
Q ss_pred EeCCC
Q 000860 883 YGGKL 887 (1250)
Q Consensus 883 ~~g~~ 887 (1250)
+.|+.
T Consensus 543 e~G~h 547 (567)
T COG1132 543 ERGTH 547 (567)
T ss_pred EecCH
Confidence 99986
No 264
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=360.68 Aligned_cols=219 Identities=26% Similarity=0.322 Sum_probs=184.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 589999998873 2458999999999999999999999999999999999875 3579999999876
Q ss_pred Ccc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCC-CCC---CCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000860 729 EQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRL-PKE---ISKDQRHEFVEEVMSLVELDSLRHALVGSPGSF 800 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~-~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~ 800 (1250)
... ..++.++||+|++.+++.+||+||+.+...... ..+ .+.++.+++++++++.+||.+..++.+++
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~---- 145 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVAN---- 145 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhh----
Confidence 431 123569999999989999999999987532110 001 12334556789999999999888887764
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++...+|++++|.+ |+
T Consensus 146 -LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 146 -LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999878999999999975 57788999999985 78
Q ss_pred EEEeCCCCc
Q 000860 881 VIYGGKLGV 889 (1250)
Q Consensus 881 ~~~~g~~~~ 889 (1250)
+++.|+.+.
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 889888753
No 265
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=8.1e-34 Score=356.83 Aligned_cols=123 Identities=24% Similarity=0.360 Sum_probs=100.2
Q ss_pred CCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhh---CCcEEE
Q 000860 749 QVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSPGSFGLSTEQRKRLTIAVELVA---NPSIIF 824 (1250)
Q Consensus 749 ~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~~~~~lSgGerqr~~ia~~l~~---~p~il~ 824 (1250)
.+||.|.+.|...+. .. .+..++++.+||... .+..+. .|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~~~-----tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQPAT-----TLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCccc-----cCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467777777765432 11 124578888999753 455543 499999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee-----cCcEEEEeCCC
Q 000860 825 MDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK-----RGGRVIYGGKL 887 (1250)
Q Consensus 825 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~-----~gg~~~~~g~~ 887 (1250)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|++++|. +||++++.|++
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999974 457899999994 47899999986
No 266
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=324.61 Aligned_cols=215 Identities=27% Similarity=0.314 Sum_probs=175.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 588999998773 235899999999999999999999999999999999964321 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ...++.++|++|++.+++. ||+||+.+....+. .....+.++.+.++++.+++.+ ..++.+
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 147 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHG--EKNKKTLDTIVEKSLKGAALWDEVKDRLHDSA-- 147 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcC--CCCHHHHHHHHHHHHHHhcCchhhHHHhhcCh--
Confidence 87642 2345679999999988874 99999998754431 1122334556788888888753 233433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 148 ---LSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 689999999975 4667899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 5 788888875
No 267
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.9e-35 Score=375.72 Aligned_cols=208 Identities=30% Similarity=0.391 Sum_probs=176.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+. .++++|+|+|++++|||.+||+|+||||||||+|+|+|..+ +.+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 6899999999852 23569999999999999999999999999999999999876 4589999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+|+.+|||+|++.+|+ .|++||+.++. | .+++ .+.++++..++.+ -.||.+|+.+
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~e----~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTLD----EAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCHH----HHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 53 467889999999999885 59999998752 1 2333 3566677776654 3467777644
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999876 589999999974 5688999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999985
No 268
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-35 Score=324.08 Aligned_cols=215 Identities=22% Similarity=0.293 Sum_probs=175.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--C-eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~--~-~~~G~i~~~g 725 (1250)
.++++|+++.++ .+++|+|+|++|++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999998873 23589999999999999999999999999999999997641 1 2589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+...... ....+..++.++++++.+++.. ..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 145 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRNA-- 145 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccCh--
Confidence 87532 234567999999988876 799999987654321 1122334456788899999842 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 ---~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 146 ---QAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 45999999999999999999999999999999999999999999999854 799999999985 5677899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 788888775
No 269
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=290.59 Aligned_cols=216 Identities=22% Similarity=0.326 Sum_probs=182.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++.+|+.+.| +...+|++||+..+.|+.+.|+|.|||||||+|+||.-..+ +..|.|.+||..+
T Consensus 6 ~l~v~dlHK~~-------------G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei 70 (256)
T COG4598 6 ALEVEDLHKRY-------------GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEI 70 (256)
T ss_pred ceehhHHHhhc-------------ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEE
Confidence 35666766555 34569999999999999999999999999999999987655 4579999999753
Q ss_pred Cc----------------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccc
Q 000860 729 EQ----------------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHA 792 (1250)
Q Consensus 729 ~~----------------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~ 792 (1250)
.- ...|.+.|+|+|...+++.+||.||+.-+.- +. .+.++.+..++.+..+...|+.+.+|.
T Consensus 71 ~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPv-hV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~ 148 (256)
T COG4598 71 RLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPV-HV-LGVSKAEAIERAEKYLAKVGIAEKADA 148 (256)
T ss_pred EeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcch-Hh-hcCCHHHHHHHHHHHHHHhCchhhhhc
Confidence 21 1234467999999999999999999865421 11 245677888889999999999998887
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcce
Q 000860 793 LVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 793 ~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
.... |||||+||++|||||+.+|+++++|||||+|||+-.-++.+.+++++++|+|.+++||.... .-+...++
T Consensus 149 YP~~-----LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v 222 (256)
T COG4598 149 YPAH-----LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHV 222 (256)
T ss_pred Cccc-----cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhhe
Confidence 7654 99999999999999999999999999999999999999999999999999999999998753 55677899
Q ss_pred eeeecCcEEEEeCCCC
Q 000860 873 LLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~~ 888 (1250)
+.|.+ |.+...||++
T Consensus 223 ~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 223 IFLHQ-GKIEEEGPPE 237 (256)
T ss_pred EEeec-ceecccCChH
Confidence 99986 8999999983
No 270
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.3e-34 Score=322.99 Aligned_cols=220 Identities=24% Similarity=0.311 Sum_probs=176.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.....+.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 589999998773 2358999999999999999999999999999999999631124689999999876
Q ss_pred Ccc---cccc-eEEEEcCCCCCCCCCCHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQS---TFAR-ISGYVEQEDVHSPQVTIEESLWFSANLRLP----KEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~~---~~~~-~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
... ..++ .++|++|++.+++.+|+.+++.+....... ......+..+++.++++.+++. +..++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998875432110 0112223345678899999997 35555543
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh-hcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEA-FDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~v~~l~~g 878 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 149999999999999999999999999999999999999999999998877999999999975 34444 799999975
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999886
No 271
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=323.22 Aligned_cols=215 Identities=24% Similarity=0.321 Sum_probs=173.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~~-~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 589999998873 2358999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+....+.. ...+..++.+.+.++.+++. +..+..+
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~-- 146 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHESA-- 146 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcCc--
Confidence 87632 234567999999998887 6999999886543211 12222345567778888764 2233433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +.|||+++|++. ++.+.+|++++|+
T Consensus 147 ---~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 147 ---LSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 35999999999999999999999999999999999999999999999865 589999999985 5778899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888775
No 272
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=327.84 Aligned_cols=218 Identities=25% Similarity=0.409 Sum_probs=175.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~~------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWRN------------GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEecC------------CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 5889999988731 2468999999999999999999999999999999999876 3589999999876
Q ss_pred CcccccceEEEEcCCCCCC--CCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 729 EQSTFARISGYVEQEDVHS--PQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~--~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
.....++.++|++|++.+. ...++++++.+....... ........+++++++++.+||.+..++.++. ||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGE-----LSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCccc-----CCHH
Confidence 4322234699999997652 234788887653210000 0111223345678899999999888887764 9999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999975 577889998766 4 7888888
Q ss_pred CCC
Q 000860 886 KLG 888 (1250)
Q Consensus 886 ~~~ 888 (1250)
+.+
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 764
No 273
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=322.87 Aligned_cols=215 Identities=24% Similarity=0.316 Sum_probs=174.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 478999998773 235899999999999999999999999999999999976532 2369999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. |++||+.+....+.. ...++.++.++++++.+++.+ ..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 145 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHKSG-- 145 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhCCc--
Confidence 87532 2346779999999988875 999999887543211 112233456777888888753 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|.
T Consensus 146 ---~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14249 146 ---LALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL 220 (251)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe
Confidence 4599999999999999999999999999999999999999999999985 5899999999975 5677899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14249 221 T-GDLVEYGRT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 788888875
No 274
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=280.54 Aligned_cols=216 Identities=25% Similarity=0.377 Sum_probs=183.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+.++++++.|.. .++|.||+++.+.||.+.++||||||||||++.|.-... +.+|+..+.|...
T Consensus 2 sirv~~in~~yg~-------------~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~f 66 (242)
T COG4161 2 SIQLNGINCFYGA-------------HQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred ceEEccccccccc-------------chheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEeccccc
Confidence 4678888887743 457999999999999999999999999999999985443 3578888876532
Q ss_pred --Cc-------ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 729 --EQ-------STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 729 --~~-------~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
+. ..+|+.+|+|+|+-.++|.+||.||+.-+. ++. .+.++++.+.+..++++.+.|.+.+|+..-
T Consensus 67 d~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap-~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~pl---- 140 (242)
T COG4161 67 DFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAP-CRV-LGLSKDQALARAEKLLKRLRLKPYADRYPL---- 140 (242)
T ss_pred ccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhh-HHH-hCCCHHHHHHHHHHHHHHhccccccccCce----
Confidence 11 246788999999999999999999996553 221 256788888899999999999999998764
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.|||||+|||+|||||+.+|.+|++||||++||++-..+++++|++++..|.|=++++|.... .-+.+.+++.|.+ |
T Consensus 141 -hlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme~-g 217 (242)
T COG4161 141 -HLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYMEN-G 217 (242)
T ss_pred -ecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeeec-C
Confidence 499999999999999999999999999999999999999999999999999999999998642 4567899999985 8
Q ss_pred EEEEeCCCC
Q 000860 880 RVIYGGKLG 888 (1250)
Q Consensus 880 ~~~~~g~~~ 888 (1250)
+++..|+..
T Consensus 218 ~ive~g~a~ 226 (242)
T COG4161 218 HIVEQGDAS 226 (242)
T ss_pred eeEeecchh
Confidence 999999864
No 275
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.4e-35 Score=325.66 Aligned_cols=225 Identities=24% Similarity=0.343 Sum_probs=180.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+.... ..+ ...++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~ 76 (268)
T PRK10419 3 LLNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPL 76 (268)
T ss_pred eEEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEec
Confidence 478999998874210 000 0013569999999999999999999999999999999999865 3589999999875
Q ss_pred Cc------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000860 729 EQ------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHALVGSPGS 799 (1250)
Q Consensus 729 ~~------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~ 799 (1250)
.. ...++.++|++|++ .+.+..|+.|++.+..... ......+..++++++++.+|+. +..++.++
T Consensus 77 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~---- 150 (268)
T PRK10419 77 AKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRPP---- 150 (268)
T ss_pred cccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCCc----
Confidence 42 12456799999997 3567899999987653211 1223444556789999999996 46666554
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++...+|++++|.+
T Consensus 151 -~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~- 227 (268)
T PRK10419 151 -QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN- 227 (268)
T ss_pred -cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 49999999999999999999999999999999999999999999998765 899999999975 56678999999985
Q ss_pred cEEEEeCCCC
Q 000860 879 GRVIYGGKLG 888 (1250)
Q Consensus 879 g~~~~~g~~~ 888 (1250)
|++++.|+..
T Consensus 228 G~i~~~g~~~ 237 (268)
T PRK10419 228 GQIVETQPVG 237 (268)
T ss_pred CEEeeeCChh
Confidence 7898888864
No 276
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=325.63 Aligned_cols=215 Identities=23% Similarity=0.256 Sum_probs=173.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~-~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 589999998874 2358999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++. +..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~-- 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDNA-- 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcCc--
Confidence 87632 234667999999998887 499999988754321 112223345567777777542 2333333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 166 ---~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 166 ---YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 45999999999999999999999999999999999999999999999865 799999999975 5678899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 788888875
No 277
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.7e-35 Score=326.25 Aligned_cols=211 Identities=22% Similarity=0.322 Sum_probs=173.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. +...+|+|+|++|++||+++|+||||||||||+++|+|..+ .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999998842 12358999999999999999999999999999999999875 369999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGS------PGS 799 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~------~~~ 799 (1250)
.. ..+++.++|++|++.+++ .||++|+.... ..++ +.+.++++.+||.+..+..++. +..
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCCH----HHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345678999999999887 49999995321 1122 3456778888987665554432 133
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
..||||||||++|||||+.+|+|++|||||++||+.+...+++.|+++. .++|||+++|++. ....+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999974 3456999999985 7
Q ss_pred EEEEeCCCC
Q 000860 880 RVIYGGKLG 888 (1250)
Q Consensus 880 ~~~~~g~~~ 888 (1250)
++++.|+++
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 888988863
No 278
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.4e-36 Score=351.19 Aligned_cols=193 Identities=25% Similarity=0.431 Sum_probs=159.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
.||||||||+||||+.++|..+++|+ +|+|.+||+|+++. .+++.||+|.|+|.+|. .||+|||.|+.. ..
T Consensus 496 ~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~--~~ 569 (716)
T KOG0058|consen 496 VVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD--NA 569 (716)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC--CC
Confidence 48999999999999999999999976 99999999998655 46899999999988886 599999999854 11
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
.+ +++.+..+.. .. .++ ..++++.+||.||++|. +||||||||++||
T Consensus 570 t~------e~i~~AAk~A------Na-----------------h~F---I~~~p~gY~T~VGEkG~-qLSGGQKQRIAIA 616 (716)
T KOG0058|consen 570 TD------EEIEAAAKMA------NA-----------------HEF---ITNFPDGYNTVVGEKGS-QLSGGQKQRIAIA 616 (716)
T ss_pred CH------HHHHHHHHHh------Ch-----------------HHH---HHhCccccccccCCccc-cccchHHHHHHHH
Confidence 11 1111111100 01 222 23589999999998765 4999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|||++||.||||||.||+||+.++..+.+.|.+..+ ++||+++- |+.++.+.+|+|+++++|++++.|+++|+.+
T Consensus 617 RALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIA--HRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 617 RALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIA--HRLSTVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred HHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEe--hhhhHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 999999999999999999999999999999999875 58888763 3678899999999999999999999999875
No 279
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2e-35 Score=326.34 Aligned_cols=209 Identities=28% Similarity=0.432 Sum_probs=163.2
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 57888887632 12468999999999999999999999999999999999875 357999999987532
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCCC
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHE-----FVEEVMSLV--ELDSLRHALVGSPGSF 800 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~-----~v~~~l~~l--~l~~~~~~~v~~~~~~ 800 (1250)
..+++.++|++|++.+++ .||+||+.+... ........+ ..+++++.+ ++....+..+ .
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-----~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQG-----A 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCC-----C
Confidence 234667999999987764 699999976421 111111111 112333333 3333333333 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ |+|||+++|++. ++ ..+|++++|.+ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 5999999999999999999999999999999999999999999999864 899999999985 34 57999999985 78
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 8888875
No 280
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=7.8e-35 Score=356.80 Aligned_cols=220 Identities=22% Similarity=0.370 Sum_probs=182.3
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 57889998773 23589999999999999999999999999999999997653235899999998764
Q ss_pred ccc----ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCC
Q 000860 730 QST----FARISGYVEQEDVHSPQVTIEESLWFSANLRLPK-EISKDQRHEFVEEVMSLVELDSLR-HALVGSPGSFGLS 803 (1250)
Q Consensus 730 ~~~----~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~v~~~~~~~lS 803 (1250)
... .++.+|||+|++.+++.+||+|++.+........ ....++.+++++++++.+++.+.. ++.++ .||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVG-----DYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchh-----hCC
Confidence 311 2456999999998899999999998864332111 122344556788999999998654 45554 499
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++...+|++++|++ |+++.
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999975 57788999999986 78888
Q ss_pred eCCCCc
Q 000860 884 GGKLGV 889 (1250)
Q Consensus 884 ~g~~~~ 889 (1250)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 887653
No 281
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-36 Score=328.71 Aligned_cols=217 Identities=28% Similarity=0.404 Sum_probs=182.7
Q ss_pred CCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECC
Q 000860 646 HPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISG 725 (1250)
Q Consensus 646 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g 725 (1250)
....++|+|+++.|+. ++++|+||||++.||+.+|++||||+||||++++|....+ ..+|.|.+||
T Consensus 534 ~~G~i~fsnvtF~Y~p------------~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~iDg 599 (790)
T KOG0056|consen 534 TQGKIEFSNVTFAYDP------------GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSITIDG 599 (790)
T ss_pred cCCeEEEEEeEEecCC------------CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEEEcC
Confidence 3457999999999863 5689999999999999999999999999999999997654 4589999999
Q ss_pred ccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHH--HH-HHcCCcccccccccCCCC
Q 000860 726 YPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEE--VM-SLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 726 ~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~--~l-~~l~l~~~~~~~v~~~~~ 799 (1250)
++++. .++|+.||.||||..+| +.|+..|++|+. | +.++++..+.++. +- +.++..+-.++.||+.+.
T Consensus 600 qdIrnvt~~SLRs~IGVVPQDtvLF-NdTI~yNIryak----~-~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGL 673 (790)
T KOG0056|consen 600 QDIRNVTQSSLRSSIGVVPQDTVLF-NDTILYNIRYAK----P-SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGL 673 (790)
T ss_pred chHHHHHHHHHHHhcCcccCcceee-cceeeeheeecC----C-CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhccc
Confidence 99764 56888999999999988 469999998862 2 2344444333222 11 346778888999998665
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
+ |||||||||+|||+++++|.|++|||+||+||..+++.|+..|.++++ ++|.|++.|+.|. .-.+|.|+++++ |
T Consensus 674 k-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLST--ivnAD~ILvi~~-G 748 (790)
T KOG0056|consen 674 K-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLST--IVNADLILVISN-G 748 (790)
T ss_pred c-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehh--eecccEEEEEeC-C
Confidence 4 999999999999999999999999999999999999999999999974 8999999999863 457899999986 8
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|.-
T Consensus 749 ~IvErG~H 756 (790)
T KOG0056|consen 749 RIVERGRH 756 (790)
T ss_pred eEeecCcH
Confidence 99999874
No 282
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.1e-35 Score=356.60 Aligned_cols=211 Identities=23% Similarity=0.369 Sum_probs=181.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 589999999873 2458999999999999999999999999999999999876 3589999999876
Q ss_pred Ccc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQS---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
... . .++.+||++|++.+++.+||+|++.+... ...+.+++++++++.++|.+..++.++. |||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~-------~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP-------KRQASMQKMKQLLAALGCQLDLDSSAGS-----LEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc-------cchHHHHHHHHHHHHcCCCccccCChhh-----CCH
Confidence 431 1 23468999999999999999999987531 1123456788999999999888887764 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...||++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999975 57788999999985 788888
Q ss_pred CCCC
Q 000860 885 GKLG 888 (1250)
Q Consensus 885 g~~~ 888 (1250)
|+.+
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 8864
No 283
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=9e-35 Score=317.01 Aligned_cols=191 Identities=26% Similarity=0.417 Sum_probs=160.1
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHH
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVTIE 753 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~ 753 (1250)
++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||+
T Consensus 34 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv~ 102 (224)
T cd03220 34 EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTGR 102 (224)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcHH
Confidence 4679999999999999999999999999999999999866 458999999986421 11123345779999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000860 754 ESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 833 (1250)
Q Consensus 754 e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD 833 (1250)
||+.+..... ..+..+.+++++++++.+++.+..++.++ .||||||||++|||+|+.+|++++|||||+|||
T Consensus 103 enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEP~~gLD 174 (224)
T cd03220 103 ENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPVK-----TYSSGMKARLAFAIATALEPDILLIDEVLAVGD 174 (224)
T ss_pred HHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 9998875432 12334455678889999999888887775 499999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 834 ARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 834 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
+.++..+.+.|++++++|+|||+++|++. ++...+|++++|.+ |++++.|
T Consensus 175 ~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 175 AAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999998777899999999974 56778999999985 7877654
No 284
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=367.14 Aligned_cols=212 Identities=26% Similarity=0.386 Sum_probs=177.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++|.|+. +++++|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEEh
Confidence 5899999998853 23569999999999999999999999999999999999876 3579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-------SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~v~~~~ 798 (1250)
+. ..+++.++||||++.+++ .|++||+.++. +...+++ .++++++..++. +-.||.+|+.+
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~~----~i~~al~~~~l~~~i~~lp~Gldt~ig~~g 478 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSRE----QIEEAARMAYAMDFINKMDNGLDTVIGENG 478 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCHH----HHHHHHHHhCcHHHHHhcccccCceeCCCC
Confidence 53 457788999999999886 69999997642 2123333 355566666543 34577787644
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
..||||||||++|||||+++|+|++||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 479 -~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~- 553 (582)
T PRK11176 479 -VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED- 553 (582)
T ss_pred -CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 5799999999999999999999999999999999999999999999874 4799999999974 6788999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 799999885
No 285
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=324.90 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=174.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 689999998873 235899999999999999999999999999999999975321 2479999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD----SLRHALVGS 796 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~v~~ 796 (1250)
.++.. ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.+++.++.+++. +..++.+
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 159 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEKG-- 159 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCCc--
Confidence 87632 2346689999999888875 99999988654321 11 12234466778887764 2333333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 160 ---~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 160 ---TALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred ---ccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 35999999999999999999999999999999999999999999999865 789999999985 5778999999997
Q ss_pred --------cCcEEEEeCCC
Q 000860 877 --------RGGRVIYGGKL 887 (1250)
Q Consensus 877 --------~gg~~~~~g~~ 887 (1250)
+.|++++.|+.
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 25889999886
No 286
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.2e-35 Score=314.15 Aligned_cols=198 Identities=28% Similarity=0.379 Sum_probs=166.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 66 (207)
T PRK13539 2 MLEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDI 66 (207)
T ss_pred EEEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeC
Confidence 478999998773 2358999999999999999999999999999999999865 3579999999875
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
.....++.++|++|++.+++.+||+||+.+....+ ... .+.++++++.+||.+..+..++ .|||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~---~~~----~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 134 (207)
T PRK13539 67 DDPDVAEACHYLGHRNAMKPALTVAENLEFWAAFL---GGE----ELDIAAALEAVGLAPLAHLPFG-----YLSAGQKR 134 (207)
T ss_pred cchhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhc---CCc----HHHHHHHHHHcCCHHHHcCChh-----hcCHHHHH
Confidence 32225667899999988888999999998765432 111 2347889999999877666665 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
|++|||+|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++. . |+++.+.
T Consensus 135 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 135 RVALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 999999999999999999999999999999999999998777999999999975 343 3 8887774
No 287
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=5.7e-35 Score=311.00 Aligned_cols=179 Identities=26% Similarity=0.349 Sum_probs=152.3
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCC-CC
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-----STFARISGYVEQEDV-HS 747 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~yv~q~~~-~~ 747 (1250)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. .+
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3569999999999999999999999999999999999876 358999999987531 134567999999973 33
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000860 748 PQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDE 827 (1250)
Q Consensus 748 ~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDE 827 (1250)
...||+||+.+..... ..+.++..++++++++.++|.+..++.+. .||||||||++|||+|+.+|++++|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPTH-----CLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999999865432 23344455678899999999888787775 499999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCC
Q 000860 828 PTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPS 862 (1250)
Q Consensus 828 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 862 (1250)
||+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999974
No 288
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.4e-35 Score=364.79 Aligned_cols=209 Identities=26% Similarity=0.380 Sum_probs=177.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. ++++|+|+|++++|||++||+|+||||||||+|+|+|..++ .+|+|.+||.++
T Consensus 340 ~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 405 (592)
T PRK10790 340 RIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRPL 405 (592)
T ss_pred eEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEh
Confidence 5899999998842 23599999999999999999999999999999999998764 579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+++.++||||++.+|+. |++||+.++. ..++ +.++++++..|+.+ -.|+.+|+.
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~d----~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~- 473 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DISE----EQVWQALETVQLAELARSLPDGLYTPLGEQ- 473 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCCH----HHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 53 4678899999999999875 9999998752 1233 33667777777654 346677663
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
+..||||||||++|||||+++|+|++||||||+||+.+++.+.+.|+++.+ ++|+|+++|+++ ....+|+|++|++
T Consensus 474 g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~- 549 (592)
T PRK10790 474 GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR- 549 (592)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 356999999999999999999999999999999999999999999998854 799999999984 5778999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 550 G~i~~~G~~ 558 (592)
T PRK10790 550 GQAVEQGTH 558 (592)
T ss_pred CEEEEEcCH
Confidence 899999885
No 289
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-35 Score=304.72 Aligned_cols=168 Identities=29% Similarity=0.453 Sum_probs=148.7
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ .+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 5788887763 2358999999999999999999999999999999999865 357999999987643
Q ss_pred --ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 731 --STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 731 --~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
..+++.++|++|++.+++.+|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999763 8999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|.|+|+++|++. ++...+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999975 567789999999864
No 290
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.1e-35 Score=362.32 Aligned_cols=211 Identities=28% Similarity=0.452 Sum_probs=178.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. +++++|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 338 ~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~i 404 (574)
T PRK11160 338 SLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQPI 404 (574)
T ss_pred eEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 6899999998842 12468999999999999999999999999999999999876 4589999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc------ccccccCCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL------RHALVGSPGS 799 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~------~~~~v~~~~~ 799 (1250)
++ ..+++.++||+|++.+++ .|++||+.++. | +.++ +.++++++..++.+. .||.+|+. .
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~~----~~i~~al~~~~l~~~i~~p~GldT~vge~-g 473 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NASD----EALIEVLQQVGLEKLLEDDKGLNAWLGEG-G 473 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-ccCH----HHHHHHHHHcCCHHHHcCccccCchhcCC-C
Confidence 54 457788999999998886 59999998753 1 2232 346777888887654 46777664 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
..||||||||++|||+|+++|++|+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++ |
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~-G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN-G 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-C
Confidence 5699999999999999999999999999999999999999999999885 5899999999985 4567999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
+++..|+.
T Consensus 550 ~i~~~g~~ 557 (574)
T PRK11160 550 QIIEQGTH 557 (574)
T ss_pred eEEEeCCH
Confidence 99998885
No 291
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=354.94 Aligned_cols=216 Identities=27% Similarity=0.348 Sum_probs=181.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 488999998873 2358999999999999999999999999999999999865 3579999999876
Q ss_pred Cc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ..+++.+||++|++.+++.+||+||+.+.............+.+++++++++.++|.+..++.++ .|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLK-----YLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchh-----hCCH
Confidence 42 12456799999999899999999999885321111112334455678899999999877777665 4999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++...+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999985 57788999999986 677766
Q ss_pred CC
Q 000860 885 GK 886 (1250)
Q Consensus 885 g~ 886 (1250)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 54
No 292
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.4e-35 Score=329.64 Aligned_cols=231 Identities=26% Similarity=0.374 Sum_probs=188.8
Q ss_pred cccCCCCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEE
Q 000860 641 MIMPFHPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGD 720 (1250)
Q Consensus 641 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~ 720 (1250)
+..|.+...+.++++++..+ ..++++|+|+||.+++||-+||+||||||||||.|+|.|..+ +.+|.
T Consensus 326 m~LP~P~g~L~Ve~l~~~PP-----------g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p~~G~ 392 (580)
T COG4618 326 MPLPAPQGALSVERLTAAPP-----------GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--PTSGS 392 (580)
T ss_pred CCCCCCCceeeEeeeeecCC-----------CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--cCCCc
Confidence 44555556799999987321 245789999999999999999999999999999999999766 45899
Q ss_pred EEECCccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHH-----HHHHHHHHHHcCCcccccc
Q 000860 721 IKISGYPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQR-----HEFVEEVMSLVELDSLRHA 792 (1250)
Q Consensus 721 i~~~g~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~-----~~~v~~~l~~l~l~~~~~~ 792 (1250)
|.+||.++++ +.+-+.+||.||+-.+|+. ||.||+.-. ..+.+.+.. ...|.|++ +.+.+-.||
T Consensus 393 VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIaRf-----~~~~d~~kIieAA~lAgvHelI--l~lP~GYdT 464 (580)
T COG4618 393 VRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIARF-----GEEADPEKVIEAARLAGVHELI--LRLPQGYDT 464 (580)
T ss_pred EEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHHhc-----cccCCHHHHHHHHHHcChHHHH--HhCcCCccC
Confidence 9999998654 5677899999999888864 999999522 222232221 12233332 467788899
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcce
Q 000860 793 LVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 793 ~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
.+|+.+ ..||||||||+++||||-.||.+++||||-|+||.+.+..+.+.|.+.+++|.|+|+++|+|+ +...+|+|
T Consensus 465 ~iG~~G-~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~Dki 541 (580)
T COG4618 465 RIGEGG-ATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASVDKI 541 (580)
T ss_pred ccCCCC-CCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhccee
Confidence 999754 579999999999999999999999999999999999999999999999999999999999985 67899999
Q ss_pred eeeecCcEEEEeCCCCccchhHHHHhhh
Q 000860 873 LLMKRGGRVIYGGKLGVHSQIMIDYFQG 900 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~~~~~~~~~~yf~~ 900 (1250)
++|+ +|++..+|+. ++++.....
T Consensus 542 lvl~-~G~~~~FG~r----~eVLa~~~~ 564 (580)
T COG4618 542 LVLQ-DGRIAAFGPR----EEVLAKVLR 564 (580)
T ss_pred eeec-CChHHhcCCH----HHHHHHhcC
Confidence 9998 5899999997 456665543
No 293
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=320.33 Aligned_cols=216 Identities=22% Similarity=0.314 Sum_probs=175.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--Ce--eEEEEEEC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--GY--IEGDIKIS 724 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~--~~--~~G~i~~~ 724 (1250)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 488999998763 34689999999999999999999999999999999997653 11 23666666
Q ss_pred CccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000860 725 GYPKEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGSP 797 (1250)
Q Consensus 725 g~~~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~~ 797 (1250)
|.+... ..+++.++|++|++.+++.+||+||+.+...... ...+++.+++++++++.+++.+ ..+..+
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--- 151 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSPA--- 151 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCCc---
Confidence 665432 2346779999999999999999999998754321 1123455567889999999964 334433
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
..||||||||++|||+|+.+|++++|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+...+|++++|++
T Consensus 152 --~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 152 --SQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 35999999999999999999999999999999999999999999999864 699999999975 46688999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 788888875
No 294
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=320.47 Aligned_cols=219 Identities=20% Similarity=0.242 Sum_probs=177.1
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEEC
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKIS 724 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~ 724 (1250)
..+..+++++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 3577788877652 346899999999999999999999999999999999976431 258999999
Q ss_pred CccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 725 GYPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 725 g~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . ..+..+.++++++.+++.+..+...+ ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987632 23466799999998877 5999999998765431 1 22334678889999998643222221 123
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee---
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK--- 876 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~--- 876 (1250)
+.||||||||++|||||+++|++++|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 4699999999999999999999999999999999999999999999985 4799999999985 5778899999996
Q ss_pred ----cCcEEEEeCCC
Q 000860 877 ----RGGRVIYGGKL 887 (1250)
Q Consensus 877 ----~gg~~~~~g~~ 887 (1250)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 35899998875
No 295
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=335.35 Aligned_cols=224 Identities=23% Similarity=0.323 Sum_probs=188.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--eeEEEEEECCc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG--YIEGDIKISGY 726 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~--~~~G~i~~~g~ 726 (1250)
.++++||+..+.... +...+++||||++.+||++||+|.|||||||+.++|.|..+.+ ..+|+|.++|.
T Consensus 5 lL~V~nL~v~~~~~~---------~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~ 75 (539)
T COG1123 5 LLEVENLTVEFATDG---------GRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGR 75 (539)
T ss_pred eEEEeceEEEEecCC---------cceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCc
Confidence 589999998886531 2357999999999999999999999999999999999976543 35799999998
Q ss_pred cCCc-------ccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000860 727 PKEQ-------STFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSP 797 (1250)
Q Consensus 727 ~~~~-------~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~ 797 (1250)
++.. ....+.++|++|++ .+.|-+||.+.+.-...++.. .+.++.++++.++++++||.+-... +.
T Consensus 76 dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~--~~~~ea~~~a~elL~~Vgl~~~~~~---~~ 150 (539)
T COG1123 76 DLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK--GSRAEARKRAVELLEQVGLPDPERR---DR 150 (539)
T ss_pred chhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHcCCCChhhh---cc
Confidence 6432 12346799999996 466789999988766665532 3477788889999999999887655 33
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
.+..||||||||+.||+||+.+|++|++||||++||+.++.+|.+.|+++.+ .|.++|+||||+. -+.+.+|||+||.
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~-Vva~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLG-VVAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHH-HHHHhcCeEEEEE
Confidence 4567999999999999999999999999999999999999999999999974 5999999999985 4788999999998
Q ss_pred cCcEEEEeCCCC
Q 000860 877 RGGRVIYGGKLG 888 (1250)
Q Consensus 877 ~gg~~~~~g~~~ 888 (1250)
+ |++++.|+.+
T Consensus 230 ~-G~iVE~G~~~ 240 (539)
T COG1123 230 K-GEIVETGPTE 240 (539)
T ss_pred C-CEEEEecCHH
Confidence 5 8999999973
No 296
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-35 Score=316.05 Aligned_cols=191 Identities=27% Similarity=0.411 Sum_probs=165.9
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecC----cccccceEEeecccc-ccCCCCCHHHHHHHHHHccC
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELD----EFQVQRASAYIGQTD-NHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~----~~~~~~~~~yv~Q~~-~~~~~~TV~e~l~f~~~~~~ 76 (1250)
++|+||||||||||+++|+|+++|. +|.|.++|.+.. ....++.+|||.|++ ..+...||.|.+.|+....+
T Consensus 33 ~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g 109 (235)
T COG1122 33 VLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLG 109 (235)
T ss_pred EEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcC
Confidence 7899999999999999999999975 899999999875 345688999999985 67777899999999987655
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
...+ + .+.+++++|+.+||.+.++..+-. |||||||||+|
T Consensus 110 ~~~~---------------------e--------------~~~rv~~~l~~vgl~~~~~r~p~~-----LSGGqkqRvaI 149 (235)
T COG1122 110 LPRE---------------------E--------------IEERVAEALELVGLEELLDRPPFN-----LSGGQKQRVAI 149 (235)
T ss_pred CCHH---------------------H--------------HHHHHHHHHHHcCchhhccCCccc-----cCCcceeeHHh
Confidence 4321 0 112478899999999988877654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|.+|+.+|++|+|||||||||+.++.++++.++++.++.++|+|++ +|+.+.+..++|++++|++|+++++|++.++.+
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~-tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIV-THDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEE-eCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 9999999999999999999999999999999999987667788876 567889999999999999999999999887754
No 297
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.2e-34 Score=310.58 Aligned_cols=194 Identities=24% Similarity=0.319 Sum_probs=162.3
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 5678887663 2468999999999999999999999999999999999865 357999999987542
Q ss_pred --ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 731 --STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 731 --~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
..+++.++|++|++.+++.+||.|++.+....+. . + +++++++++.+++.+..++.++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPAAQ-----LSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCChhh-----cCHHHHH
Confidence 2345678999999888888999999987654321 1 1 34578899999998887777654 9999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceee
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLL 874 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~ 874 (1250)
|++|||+++.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++.. + .+++++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~--~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-L--VEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-c--cceEEee
Confidence 9999999999999999999999999999999999999987779999999999742 2 3455543
No 298
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.5e-35 Score=375.13 Aligned_cols=209 Identities=31% Similarity=0.440 Sum_probs=175.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++|+|+. .++++|+|+|++|+|||.+||+||||||||||+|+|+|..+ +.+|+|.+||.++
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeH
Confidence 6899999999853 23569999999999999999999999999999999999876 4579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+|+.+|||+|++.+++ .|++||+.++. | +.+++ .+.++++..++.+ -.|+.+|+.+
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~~~----~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIPDA----DLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCCHH----HHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 43 457889999999999885 59999997641 1 23333 3455666666543 3467777644
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|+|++|++
T Consensus 614 -~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~- 686 (710)
T TIGR03796 614 -ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER- 686 (710)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 57999999999999999999999999999999999999999999985 4899999999974 5678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 899999985
No 299
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.3e-34 Score=321.03 Aligned_cols=215 Identities=27% Similarity=0.303 Sum_probs=174.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc-
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~- 727 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 478999998873 2358999999999999999999999999999999999876 357999999876
Q ss_pred ----CCc---c----cccceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-cccccc
Q 000860 728 ----KEQ---S----TFARISGYVEQEDV--HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-SLRHAL 793 (1250)
Q Consensus 728 ----~~~---~----~~~~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~ 793 (1250)
+.. . ..++.++|++|++. +.+..|+.||+.+..... . .....+.++.++++++.+++. +..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 322 1 12356899999974 445679999987543211 1 111123446788999999997 356666
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcce
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
+. .||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++...+|++
T Consensus 146 ~~-----~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 PR-----AFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred ch-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 54 49999999999999999999999999999999999999999999998654 899999999974 566789999
Q ss_pred eeeecCcEEEEeCCC
Q 000860 873 LLMKRGGRVIYGGKL 887 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~ 887 (1250)
++|++ |+++..|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 788888875
No 300
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.2e-35 Score=370.96 Aligned_cols=210 Identities=28% Similarity=0.415 Sum_probs=174.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+.. +++++|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQ--PTGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCEEEECCEEH
Confidence 58999999998532 13569999999999999999999999999999999999876 3579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+++.++||+|++.+++ .|++||+.++. + +.++ +.+.++++..++.+ -.||.+|+.+
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~~----e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTPD----EEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 54 457788999999999885 69999998752 1 2233 33566677666644 3567777643
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+|++||||||+||++++..+.+ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 616 -~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~- 688 (711)
T TIGR00958 616 -SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK- 688 (711)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC-
Confidence 5799999999999999999999999999999999999999998 22 235899999999974 5688999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 689 G~ive~Gt~ 697 (711)
T TIGR00958 689 GSVVEMGTH 697 (711)
T ss_pred CEEEEeeCH
Confidence 799999985
No 301
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=322.13 Aligned_cols=214 Identities=22% Similarity=0.288 Sum_probs=173.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--C-eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~--~-~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|++|++||+++|+||||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 589999998873 23589999999999999999999999999999999996431 1 2579999999
Q ss_pred ccCC-----cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000860 726 YPKE-----QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS----LRHALVGS 796 (1250)
Q Consensus 726 ~~~~-----~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~v~~ 796 (1250)
.++. ...+++.++|++|++.+++ .||.||+.+....+ ... .+.++.++++++.+++.+ ..+..+
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 149 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARIN---GYK-GDMDELVERSLRQAALWDEVKDKLKQSG-- 149 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhc---Ccc-hHHHHHHHHHHHHhCchhhHHHHhcCCc--
Confidence 8753 1234667999999988887 49999998865432 111 223455677788877743 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 150 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 150 ---LSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 35999999999999999999999999999999999999999999999865 589999999985 6888999999997
Q ss_pred c--------CcEEEEeCCC
Q 000860 877 R--------GGRVIYGGKL 887 (1250)
Q Consensus 877 ~--------gg~~~~~g~~ 887 (1250)
+ .|+++..|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 4789988875
No 302
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=319.67 Aligned_cols=219 Identities=25% Similarity=0.333 Sum_probs=175.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~--~-~~~~G~i~~~g 725 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 578899998763 2358999999999999999999999999999999999643 1 12579999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSF 800 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~ 800 (1250)
.++.. ...++.++|++|++.+++. |+.||+.+..... ...+.+..++++.++++.+++.+....... ....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIH--GEDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhc--CCCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87642 2346679999999988875 9999998764322 112233455678889999988542111111 1224
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++...+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 5999999999999999999999999999999999999999999999864 899999999985 57888999999985 79
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9888875
No 303
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=317.69 Aligned_cols=218 Identities=19% Similarity=0.263 Sum_probs=177.4
Q ss_pred eeEEEEeEEEEEeCCcc----ccc--ccc-cccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEE
Q 000860 648 LTMTFHNISYYVDTPQA----MRS--KGI-HEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGD 720 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~----~~~--~~~-~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~ 720 (1250)
+.++++|+++.+..... .+. .++ ....+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 36788999877765311 110 011 2245679999999999999999999999999999999999876 35799
Q ss_pred EEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000860 721 IKISGYPKEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSF 800 (1250)
Q Consensus 721 i~~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~ 800 (1250)
|.++|. +++++|+..+.+.+|+.||+.+..... ..+.++..+.++++++.+++.+..+..++
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPVK----- 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCcc-----
Confidence 999985 356777777778899999998765432 23344555667888889999887777665
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++.|+|||+++|++. ++.+.+|++++|.+ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 49999999999999999999999999999999999999999999998777999999999974 56778999999985 78
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
++..|+.
T Consensus 221 i~~~g~~ 227 (264)
T PRK13546 221 LKDYGEL 227 (264)
T ss_pred EEEeCCH
Confidence 8888875
No 304
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-34 Score=309.74 Aligned_cols=194 Identities=22% Similarity=0.316 Sum_probs=164.1
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
+.++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 67889998763 2458999999999999999999999999999999999876 35899999998764
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ..+++.++|++|+..+++.+||+|++.+..... .. ...++++++.+++.+..++.++ .||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~~------~~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHFS------PG--AVGITELCRLFSLEHLIDYPCG-----LLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhcC------cc--hHHHHHHHHHcCCchhhhCChh-----hcCHHHH
Confidence 3 335678999999988888999999998764211 11 2357889999999877676665 4999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhccee
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELL 873 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~ 873 (1250)
||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ....+|..+
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999999999999999999999999999998777999999999974 445666544
No 305
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-34 Score=332.19 Aligned_cols=229 Identities=26% Similarity=0.394 Sum_probs=196.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++++ ..++|+||||++++||++||+|.||||||||+|+|+|..+ +.+|+|.+||.+.
T Consensus 8 ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEc
Confidence 578999999874 3579999999999999999999999999999999999876 4689999999986
Q ss_pred Cc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000860 729 EQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lS 803 (1250)
.. .....-|+.|.||..+.|++||.||+.++...+.+ .-.+.++.+++..++++.+++....++.+++ ||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~-----Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGD-----LS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhh-----CC
Confidence 43 23345689999999999999999999887654432 2356677788899999999996557888876 99
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
+||||.|.|||||..+++||+||||||.|+......+.+.+++++++|.+||+++|... |+++.|||+.||.+ |+.+-
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999985 89999999999986 78888
Q ss_pred eCCC-C-ccchhHHHHhh
Q 000860 884 GGKL-G-VHSQIMIDYFQ 899 (1250)
Q Consensus 884 ~g~~-~-~~~~~~~~yf~ 899 (1250)
.++. . ...++++...-
T Consensus 226 ~~~~~~~~~~~~lv~~Mv 243 (500)
T COG1129 226 TRPTAAETSEDELVRLMV 243 (500)
T ss_pred ecccccCCCHHHHHHHhh
Confidence 8873 3 33345555553
No 306
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.8e-34 Score=318.63 Aligned_cols=219 Identities=24% Similarity=0.315 Sum_probs=172.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.++.
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 67899998773 23589999999999999999999999999999999997421145899999998764
Q ss_pred cc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHH-hcCCC--C-CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000860 730 QS---T-FARISGYVEQEDVHSPQVTIEESLWFSA-NLRLP--K-EISKDQRHEFVEEVMSLVELD-SLRHALVGSPGSF 800 (1250)
Q Consensus 730 ~~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~-~l~~~--~-~~~~~~~~~~v~~~l~~l~l~-~~~~~~v~~~~~~ 800 (1250)
.. . .++.++|++|++.+++.+|+.+++.+.. +++.. . .....+..++++++++.+++. +..++.+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 31 1 2346899999998888888777665432 11110 0 011223356678889999985 44454442 2
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHh-hcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEA-FDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~v~~l~~gg 879 (1250)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. .+... +|++++|.+ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 59999999999999999999999999999999999999999999999877899999999975 34444 799999975 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 88898885
No 307
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.3e-34 Score=289.91 Aligned_cols=230 Identities=24% Similarity=0.312 Sum_probs=195.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++||..++.. ++.||++||++|++||+.+||||||||||||.++|+|.......+|+|.++|.++
T Consensus 3 ~L~I~dLhv~v~~------------~keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI 70 (251)
T COG0396 3 MLEIKDLHVEVEG------------KKEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDI 70 (251)
T ss_pred eeEEeeeEEEecC------------chhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCccc
Confidence 5899999988742 2579999999999999999999999999999999999887777899999999987
Q ss_pred Cc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCC
Q 000860 729 EQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-LRHALVGSPGSFGLS 803 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~v~~~~~~~lS 803 (1250)
.. ...|.-+..-+|.|.-+|..|+.+.|..+.+.+........+..+.+++.++.+++.. ..++.+.. |+|
T Consensus 71 ~~l~~~ERAr~GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN~----GFS 146 (251)
T COG0396 71 LELSPDERARAGIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVNE----GFS 146 (251)
T ss_pred ccCCHhHHHhcCCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccCC----CcC
Confidence 54 2345567788999999999999999998877643221112345667888999999987 56666653 799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhh--cceeeeecCcEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAF--DELLLMKRGGRV 881 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~--d~v~~l~~gg~~ 881 (1250)
||||||.-|+..++.+|++.+||||-||||..+-+.|.+.++++++.|++++++||.. ++.... |++.+|.+ |++
T Consensus 147 GGEkKR~EilQ~~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~--rll~~i~pD~vhvl~~-GrI 223 (251)
T COG0396 147 GGEKKRNEILQLLLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQ--RLLDYIKPDKVHVLYD-GRI 223 (251)
T ss_pred cchHHHHHHHHHHhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHH--HHHhhcCCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999999999999999984 577766 99999996 799
Q ss_pred EEeCCCCccchhHHHHhhhCC
Q 000860 882 IYGGKLGVHSQIMIDYFQGLD 902 (1250)
Q Consensus 882 ~~~g~~~~~~~~~~~yf~~~~ 902 (1250)
+..|.+ ++.++.+.-|
T Consensus 224 v~sG~~-----el~~~le~~g 239 (251)
T COG0396 224 VKSGDP-----ELAEELEEKG 239 (251)
T ss_pred EecCCH-----HHHHHHHHhc
Confidence 998885 5777777765
No 308
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-36 Score=294.34 Aligned_cols=216 Identities=24% Similarity=0.395 Sum_probs=186.7
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|++++|. ++.+|+++|+.|++|.+++++|||||||||||.++++..+ ..+|+|.++|.++.
T Consensus 2 I~i~nv~K~y~-------------~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~ 66 (252)
T COG4604 2 ITIENVSKSYG-------------TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELT 66 (252)
T ss_pred eeehhhhHhhC-------------CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecc
Confidence 46677877663 5679999999999999999999999999999999998765 45899999999865
Q ss_pred c---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 730 Q---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 730 ~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
. ..+.+.++.+-|+......+||+|-+.|+.... ..+...++.+..++++++.++|++..|+.... |||||
T Consensus 67 ~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPY-SqGRlt~eD~~~I~~aieyl~L~~l~dryLd~-----LSGGQ 140 (252)
T COG4604 67 STPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPY-SQGRLTKEDRRIINEAIEYLHLEDLSDRYLDE-----LSGGQ 140 (252)
T ss_pred cCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcc-cCCCCchHHHHHHHHHHHHhcccchHHHhHHh-----cccch
Confidence 3 456677888999988888999999999874322 12233456678899999999999999998864 99999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||.-||+.++.+.+.++||||.++||...+..+|+.||+++++ |+|||++.||.+. .-...|.|+-|.+ |+++..|
T Consensus 141 rQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G 218 (252)
T COG4604 141 RQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQG 218 (252)
T ss_pred hhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecC
Confidence 99999999999999999999999999999999999999999876 9999999999874 4567899999985 8999999
Q ss_pred CCC
Q 000860 886 KLG 888 (1250)
Q Consensus 886 ~~~ 888 (1250)
+++
T Consensus 219 ~~~ 221 (252)
T COG4604 219 SPD 221 (252)
T ss_pred CHH
Confidence 985
No 309
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-35 Score=322.46 Aligned_cols=209 Identities=26% Similarity=0.390 Sum_probs=165.0
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. .++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 57888887632 12368999999999999999999999999999999999876 358999999987532
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCCC
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHE-----FVEEVMSLV--ELDSLRHALVGSPGSF 800 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~-----~v~~~l~~l--~l~~~~~~~v~~~~~~ 800 (1250)
...++.++|++|++.+++ .||+||+.+.... ....+..+ .+++.++.+ ++.+..+..+ .
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-----~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGERG-----V 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCC-----C
Confidence 234567999999988876 6999999765321 11111111 234444444 4554444443 3
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. +++|||+++|++. ++ ..+|++++|.+ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 599999999999999999999999999999999999999999999986 4899999999985 45 45999999986 68
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
++..|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8887764
No 310
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=319.89 Aligned_cols=214 Identities=25% Similarity=0.309 Sum_probs=174.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.++ ++++|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 589999998874 235899999999999999999999999999999999976431 2589999999
Q ss_pred ccCC-------cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHcCCc----cccccc
Q 000860 726 YPKE-------QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEIS-KDQRHEFVEEVMSLVELD----SLRHAL 793 (1250)
Q Consensus 726 ~~~~-------~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~-~~~~~~~v~~~l~~l~l~----~~~~~~ 793 (1250)
.+.. ...+++.++|++|++.+++. ||+||+.+..... ... ....++.++++++.+++. +..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIR---GVKRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHc---CCChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 7642 12346679999999988876 9999998765432 111 222345677888888774 223343
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhccee
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELL 873 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~ 873 (1250)
+ ..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|+++
T Consensus 159 ~-----~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 A-----FNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 3 35999999999999999999999999999999999999999999999865 689999999974 5778899999
Q ss_pred eeecCcEEEEeCCC
Q 000860 874 LMKRGGRVIYGGKL 887 (1250)
Q Consensus 874 ~l~~gg~~~~~g~~ 887 (1250)
+|++ |+++..|+.
T Consensus 232 ~l~~-G~i~~~g~~ 244 (265)
T PRK14252 232 YMYM-GELIEFGAT 244 (265)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 788888875
No 311
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.9e-35 Score=323.47 Aligned_cols=206 Identities=31% Similarity=0.440 Sum_probs=161.9
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++.. +++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 578888876421 12468999999999999999999999999999999999865 358999999987532
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCC-----------cccccccccC
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVEL-----------DSLRHALVGS 796 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l-----------~~~~~~~v~~ 796 (1250)
...++.++|++|++.+++ .||+|++.+.... ...++ .++.++..++ ....+..+
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-- 137 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPD-----ATDEE----VEEAAKKANIHDFIMSLPDGYDTLVGERG-- 137 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCC-----CCHHH----HHHHHHHcChHHHHHhhccccceeeccCC--
Confidence 233567999999988776 6999999764221 11111 2222333333 22222222
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 797 PGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 797 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++ ..+|++++|+
T Consensus 138 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~ 211 (238)
T cd03249 138 ---SQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQ 211 (238)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987 7899999999975 34 4899999998
Q ss_pred cCcEEEEeCCC
Q 000860 877 RGGRVIYGGKL 887 (1250)
Q Consensus 877 ~gg~~~~~g~~ 887 (1250)
+ |++++.|+.
T Consensus 212 ~-G~i~~~~~~ 221 (238)
T cd03249 212 N-GQVVEQGTH 221 (238)
T ss_pred C-CEEEEeCCH
Confidence 6 788888874
No 312
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.9e-34 Score=319.67 Aligned_cols=197 Identities=25% Similarity=0.374 Sum_probs=168.8
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCHH
Q 000860 677 LLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQEDVHSPQVTIE 753 (1250)
Q Consensus 677 iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~yv~q~~~~~~~ltv~ 753 (1250)
+|+|+|+++++||+++|+||||||||||+++|+|..+ .+|+|.++|.++.. ..+++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 6999999999999999999999999999999999764 27999999987643 23345689999998888889999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh-------CCcEEEEe
Q 000860 754 ESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVA-------NPSIIFMD 826 (1250)
Q Consensus 754 e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~-------~p~il~lD 826 (1250)
||+.+.... ....++..++++++++.++|.+..++.++ .||||||||++||++|+. +|++++||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSVN-----QLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999876321 12233445678899999999887777665 499999999999999998 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 827 EPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 827 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999975 57789999999985 788888875
No 313
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=353.87 Aligned_cols=206 Identities=26% Similarity=0.349 Sum_probs=174.4
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCCCCCCC
Q 000860 675 LQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ----STFARISGYVEQEDVHSPQV 750 (1250)
Q Consensus 675 ~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~yv~q~~~~~~~l 750 (1250)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 468999999999999999999999999999999999876 358999999987642 12356799999999888999
Q ss_pred CHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000860 751 TIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTS 830 (1250)
Q Consensus 751 tv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTs 830 (1250)
||+||+.+..........+.++..++++++++.+++.+..++.++. |||||||||+|||+|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVAT-----LSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 9999998753211010113344456788999999998877777754 99999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCc
Q 000860 831 GLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGV 889 (1250)
Q Consensus 831 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~ 889 (1250)
|||+.+...+.+.|+++++.|+|||+++|++. ++...||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999878999999999985 57788999999985 79999888654
No 314
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.1e-34 Score=316.88 Aligned_cols=210 Identities=26% Similarity=0.440 Sum_probs=168.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+.. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 68 (220)
T cd03245 2 RIEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDI 68 (220)
T ss_pred eEEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEh
Confidence 3678899887632 12468999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVG------SPGS 799 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~------~~~~ 799 (1250)
.. ...++.++|++|++.+++ .||.|++.+... ... .+.+.++++.+++.+..+..+. ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 69 RQLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred HHCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 32 234567999999998776 699999876421 111 2345678888888776665431 1112
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++. . .+.+|++++|.+ |
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g 214 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-G 214 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-C
Confidence 469999999999999999999999999999999999999999999998764 89999999985 3 479999999986 6
Q ss_pred EEEEeC
Q 000860 880 RVIYGG 885 (1250)
Q Consensus 880 ~~~~~g 885 (1250)
++++.|
T Consensus 215 ~i~~~~ 220 (220)
T cd03245 215 RIVADG 220 (220)
T ss_pred eEeecC
Confidence 776653
No 315
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1e-34 Score=369.46 Aligned_cols=211 Identities=27% Similarity=0.467 Sum_probs=177.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+. .++++|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +.+|+|.+||.++
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 6899999999853 23469999999999999999999999999999999999876 4579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+|+.++||+|++.+++ .|++||+.++. | +.++++ +.++++..++.+ -.||.+|+.+
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~~~~----i~~a~~~~~l~~~i~~lp~gl~T~i~e~G 599 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YADDEE----ILRAAELAGVTEFVRRHPDGLDMQIGERG 599 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCCHHH----HHHHHHHcChHHHHHhCcccccceecCCC
Confidence 54 467889999999999886 59999998652 1 233333 455566555543 4577777644
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+|++||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 600 -~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~- 674 (694)
T TIGR03375 600 -RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN- 674 (694)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 5799999999999999999999999999999999999999999999885 4899999999984 5689999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 899999985
No 316
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.9e-34 Score=314.28 Aligned_cols=210 Identities=24% Similarity=0.292 Sum_probs=168.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEEC--Cc-
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS--GY- 726 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~--g~- 726 (1250)
++++|+++.++.... .+.++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 678999988753110 0012469999999999999999999999999999999999866 357999998 42
Q ss_pred -cCCc---cc----ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000860 727 -PKEQ---ST----FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL-RHALVGSP 797 (1250)
Q Consensus 727 -~~~~---~~----~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~v~~~ 797 (1250)
++.. .. .++.++|++|++.+++.+||+|++.+..... ....++..+++.++++.+++.+. .+..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 148 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPPA-- 148 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCcc--
Confidence 3221 11 2346899999999999999999998764322 22334445678889999999763 455543
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeee
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMK 876 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~ 876 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. .+...+|+++.+.
T Consensus 149 ---~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 149 ---TFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred ---cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 59999999999999999999999999999999999999999999999777999999999963 4556899998763
No 317
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.9e-35 Score=287.92 Aligned_cols=185 Identities=26% Similarity=0.376 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
++.|+||||||||||||+|.+...|+ +|+|.++|+++... ..||+||.|.|+.-+++..||.||+.|+.+.
T Consensus 30 f~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v 106 (223)
T COG2884 30 FVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRV 106 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhc
Confidence 46799999999999999999999875 99999999998543 2589999999999999999999999999887
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.+.+. .++++.++|+..||.+..+... .+|||||||||
T Consensus 107 ~G~~~~~-----------------------------------i~~rV~~~L~~VgL~~k~~~lP-----~~LSGGEQQRv 146 (223)
T COG2884 107 IGKPPRE-----------------------------------IRRRVSEVLDLVGLKHKARALP-----SQLSGGEQQRV 146 (223)
T ss_pred cCCCHHH-----------------------------------HHHHHHHHHHHhccchhhhcCc-----cccCchHHHHH
Confidence 6543221 1234788999999999877664 45999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
+||||++.+|++||-||||-+|||..+.+|++.+.++.+ .|+||++++ |+..-+..+-.|++.|++|+++.+..
T Consensus 147 aIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~AT-Hd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 147 AIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMAT-HDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEEe-ccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999999999976 589999885 44555556778999999999987654
No 318
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=336.00 Aligned_cols=191 Identities=27% Similarity=0.391 Sum_probs=163.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++.... .++.++||+|+..+++++||+||+.|+.+.++...
T Consensus 32 ~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~ 108 (356)
T PRK11650 32 FIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMPK 108 (356)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCCH
Confidence 47999999999999999999999864 999999999885432 35789999999999999999999999865332110
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. + .+.+++++++.+||.+..+..+.+ |||||||||+||||
T Consensus 109 ~-----------~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGq~QRvalARA 148 (356)
T PRK11650 109 A-----------E------------------------IEERVAEAARILELEPLLDRKPRE-----LSGGQRQRVAMGRA 148 (356)
T ss_pred H-----------H------------------------HHHHHHHHHHHcCChhHhhCChhh-----CCHHHHHHHHHHHH
Confidence 0 0 011367889999999888877654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++||||||||+||+.++.++.+.|+++.++.+.|+|+++ |+..++..++|+|++|++|+++..|+++++.
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vT-Hd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVT-HDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 99999999999999999999999999999998876688888774 5578899999999999999999999999874
No 319
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.8e-35 Score=333.56 Aligned_cols=191 Identities=25% Similarity=0.349 Sum_probs=162.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+.+|+ +|+|.++|.++... ..++.++|++|+..+++..||+||+.|+...
T Consensus 33 i~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~ 109 (343)
T TIGR02314 33 IYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLEL 109 (343)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHH
Confidence 47999999999999999999999865 99999999988543 1366899999999999999999999987643
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.... + .++++.++++.+||.+..|..++. |||||||||
T Consensus 110 ~~~~~~-----------~------------------------~~~~v~e~l~~vgL~~~~~~~~~~-----LSgGqkQRV 149 (343)
T TIGR02314 110 DNTPKD-----------E------------------------IKRKVTELLALVGLGDKHDSYPSN-----LSGGQKQRV 149 (343)
T ss_pred cCCCHH-----------H------------------------HHHHHHHHHHHcCCchhhhCChhh-----CCHHHHHHH
Confidence 321100 0 012367789999999888876654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++||||||||+||+.++..+++.|+++.++.+.|+|+++ |+.+.+.++||+|++|++|++++.|+++++
T Consensus 150 ~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliT-H~~~~v~~~~d~v~vl~~G~iv~~g~~~~v 228 (343)
T TIGR02314 150 AIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLIT-HEMDVVKRICDCVAVISNGELIEQGTVSEI 228 (343)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999999999999876688888874 557788889999999999999999999887
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 229 ~ 229 (343)
T TIGR02314 229 F 229 (343)
T ss_pred H
Confidence 4
No 320
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.1e-33 Score=352.28 Aligned_cols=212 Identities=31% Similarity=0.450 Sum_probs=176.4
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|+++.|+. .++.+|+|+|++++|||.+||+|+||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 36899999998852 23468999999999999999999999999999999999876 357999999998
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSP 797 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~ 797 (1250)
+++ ..+|+.++||+|++.+++ .|++||+.++. | +.+++ .+.++++..++.+ -.|+.+++.
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~~~----~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAPFE----HVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCCHH----HHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 457888999999998885 59999997642 1 23333 3445555555443 356777764
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999884 5899999999985 4577999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 799999985
No 321
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8.7e-35 Score=370.93 Aligned_cols=210 Identities=24% Similarity=0.401 Sum_probs=176.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++|+|+. ++++|+|+|++|+|||.+||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 5899999999842 2468999999999999999999999999999999999876 4589999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+|+.+|||+|++.+++. |++||+.++.+ + +.+++ .+.++++..++.+ -.|+.+|+.+
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~---~-~~~~~----~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK---E-NVSQD----EIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC---C-CCCHH----HHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 43 5678899999999998864 99999987521 1 23333 3455566555543 3577787643
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ +...+|+|++|++
T Consensus 610 -~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 610 -SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999875 4899999999985 5688999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 799999985
No 322
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=283.84 Aligned_cols=191 Identities=20% Similarity=0.325 Sum_probs=165.6
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCC
Q 000860 673 KKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQEDVHSPQ 749 (1250)
Q Consensus 673 ~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~yv~q~~~~~~~ 749 (1250)
...++|+++|+.+++||..+|.||||||||||+|+++...+ +.+|.+++.|.+++. ..+|++++||.|.+.+|+.
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lis--p~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~ 91 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGD 91 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccC--CCCceEEEcCccccccChHHHHHHHHHHHcCcccccc
Confidence 45679999999999999999999999999999999999877 468999999998754 5688999999999999975
Q ss_pred CCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000860 750 VTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLR-HALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEP 828 (1250)
Q Consensus 750 ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEP 828 (1250)
||++|+.|...+|-.. + .+.+..+.++.+++.+.. ++.+. .||||||||++|+|-|..-|+||+||||
T Consensus 92 -tVeDNlifP~~~r~rr--~---dr~aa~~llar~~l~~~~L~k~it-----~lSGGE~QriAliR~Lq~~P~ILLLDE~ 160 (223)
T COG4619 92 -TVEDNLIFPWQIRNRR--P---DRAAALDLLARFALPDSILTKNIT-----ELSGGEKQRIALIRNLQFMPKILLLDEI 160 (223)
T ss_pred -chhhccccchHHhccC--C---ChHHHHHHHHHcCCchhhhcchhh-----hccchHHHHHHHHHHhhcCCceEEecCc
Confidence 9999999988776322 1 234567788999987643 33343 5999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 829 TSGLDARAAAIVMRAVRNTV-DTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 829 TsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
||+||..+++.|.++|.++. .+.+.++-+||++. +....+||++-+..
T Consensus 161 TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~d-qa~rha~k~itl~~ 209 (223)
T COG4619 161 TSALDESNKRNIEEMIHRYVREQNVAVLWITHDKD-QAIRHADKVITLQP 209 (223)
T ss_pred hhhcChhhHHHHHHHHHHHhhhhceEEEEEecChH-HHhhhhheEEEecc
Confidence 99999999999999999986 66899999999985 56789999999976
No 323
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-35 Score=334.57 Aligned_cols=191 Identities=25% Similarity=0.403 Sum_probs=163.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccc-cceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQV-QRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++..... ++.++||+|+..+|+++||+||+.|+.+.++...
T Consensus 34 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~ 110 (351)
T PRK11432 34 MVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPK 110 (351)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCH
Confidence 47999999999999999999999865 9999999998865433 5789999999999999999999999865432111
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. + .+++++++++.+||.+..+..+. .|||||||||+||||
T Consensus 111 ~-----------~------------------------~~~~v~~~l~~~gl~~~~~r~~~-----~LSgGq~QRVaLARa 150 (351)
T PRK11432 111 E-----------E------------------------RKQRVKEALELVDLAGFEDRYVD-----QISGGQQQRVALARA 150 (351)
T ss_pred H-----------H------------------------HHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHH
Confidence 0 0 01236788999999887776665 499999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++||||||||+||+.++.++.+.|+++.++.++|+|++ +|+..++.+++|+|++|++|+++..|+++++.
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~v-THd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYV-THDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-cCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999987668888776 56678899999999999999999999998874
No 324
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.1e-35 Score=334.06 Aligned_cols=192 Identities=20% Similarity=0.304 Sum_probs=163.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc---c----cceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ---V----QRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~---~----~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... . ++.++||+|++.+++++||+||+.|+..
T Consensus 21 i~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~ 97 (363)
T TIGR01186 21 IFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPE 97 (363)
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999865 999999999986432 2 5689999999999999999999999865
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
..+.... + ..+++.++++.+||++..++.+++ ||||||||
T Consensus 98 ~~~~~~~-----------~------------------------~~~~~~~~l~~vgL~~~~~~~p~~-----LSGGq~QR 137 (363)
T TIGR01186 98 LLGWPEQ-----------E------------------------RKEKALELLKLVGLEEYEHRYPDE-----LSGGMQQR 137 (363)
T ss_pred HcCCCHH-----------H------------------------HHHHHHHHHHhcCCchhhhCChhh-----CCHHHHHH
Confidence 4321100 0 011367789999998877777654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|+||||||||++||+.++.++.+.|+++.++.++|+|+++ |+..++.+++|+|++|++|+++..|++++
T Consensus 138 V~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vT-Hd~~ea~~~~drI~vl~~G~iv~~g~~~e 216 (363)
T TIGR01186 138 VGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFIT-HDLDEAIRIGDRIVIMKAGEIVQVGTPDE 216 (363)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 99999999999999999999999999999999999998766688888874 56788899999999999999999999998
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+..
T Consensus 217 i~~ 219 (363)
T TIGR01186 217 ILR 219 (363)
T ss_pred HHh
Confidence 753
No 325
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=303.53 Aligned_cols=170 Identities=30% Similarity=0.430 Sum_probs=149.2
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5788887763 2358999999999999999999999999999999999866 358999999987542
Q ss_pred -----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 731 -----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 731 -----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
..+++.++|++|++.+++.+|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23467899999999888889999976431 8999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999974 566689999999863
No 326
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=318.74 Aligned_cols=211 Identities=27% Similarity=0.406 Sum_probs=165.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 4788999987631 2358999999999999999999999999999999999876 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccc------cCCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALV------GSPGS 799 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v------~~~~~ 799 (1250)
.. ..+++.++|++|++.+++. ||+||+.+... .... +.+++.++.+++.+..+... -....
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 42 2346679999999887775 99999976521 1111 22344444444443332211 01113
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
..||||||||++||++|+.+|++++|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ ..+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 4699999999999999999999999999999999999999999999985 5899999999985 34 56999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887764
No 327
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-34 Score=333.66 Aligned_cols=192 Identities=24% Similarity=0.406 Sum_probs=164.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.++||+|+..+||++||+||+.|+.+.++...
T Consensus 32 ~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~ 108 (353)
T TIGR03265 32 FVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMGR 108 (353)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCH
Confidence 47999999999999999999999865 999999999886432 35789999999999999999999999865332110
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.+ .+.+++++++.+||.+..|..+. +|||||||||+||||
T Consensus 109 -----------~~------------------------~~~~~~~~l~~l~L~~~~~~~~~-----~LSgGq~QRvaLARa 148 (353)
T TIGR03265 109 -----------AE------------------------VAERVAELLDLVGLPGSERKYPG-----QLSGGQQQRVALARA 148 (353)
T ss_pred -----------HH------------------------HHHHHHHHHHHcCCCchhhCChh-----hCCHHHHHHHHHHHH
Confidence 00 01236789999999988887665 499999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|+.+|+++|||||||+||+.++.++.+.|+++.++.+.|+|+++ |+..++..++|+|++|++|+++..|+++++.+
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vT-Hd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~ 224 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVT-HDQEEALSMADRIVVMNHGVIEQVGTPQEIYR 224 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999876688888774 55788999999999999999999999988753
No 328
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-35 Score=292.63 Aligned_cols=193 Identities=22% Similarity=0.381 Sum_probs=164.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccc----cceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQV----QRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++++|||||||||.+.++.|+.+|+ +|+|.+||.+++...+ +.-+||+||+...|..+||+|||....+.+.
T Consensus 32 iVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~ 108 (243)
T COG1137 32 IVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIRE 108 (243)
T ss_pred EEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhh
Confidence 57899999999999999999999975 9999999999976533 3458999999999999999999987665432
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.... ..+ .+.+.+.+|+.|+|.|.++.+-.+ ||||||+|+.|
T Consensus 109 ~d~~---------~~~------------------------~~~~l~~LL~ef~i~hlr~~~a~s-----LSGGERRR~EI 150 (243)
T COG1137 109 KDLK---------KAE------------------------RKEELDALLEEFHITHLRDSKAYS-----LSGGERRRVEI 150 (243)
T ss_pred cchh---------HHH------------------------HHHHHHHHHHHhchHHHhcCcccc-----cccchHHHHHH
Confidence 1100 000 012367899999999999987554 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+.+|+.++||||++|+||.+..+|.+.++.+.. .|..|+++ .|+..++...+||.+++.+|++..+|+++++.+
T Consensus 151 ARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLIT-DHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 151 ARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLIT-DHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred HHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEc-cccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 9999999999999999999999999999999999976 47777776 677889999999999999999999999999864
No 329
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=295.86 Aligned_cols=191 Identities=25% Similarity=0.398 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||+||||||++|+|..++. +|+|.++|+|++... .+.-++||||....|+.+||+|||..++..+.
T Consensus 31 iv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~ 107 (237)
T COG0410 31 IVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARR 107 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhccc
Confidence 58999999999999999999999864 999999999997543 35679999999999999999999998764432
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhC-CccccccccCCCccccCccccchhhH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLG-LDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
..... +...+++.+.|- |.+.++.+-|. |||||||-++
T Consensus 108 ~~~~~------------------------------------~~~~e~v~~lFP~Lker~~~~aG~-----LSGGEQQMLA 146 (237)
T COG0410 108 DKEAQ------------------------------------ERDLEEVYELFPRLKERRNQRAGT-----LSGGEQQMLA 146 (237)
T ss_pred ccccc------------------------------------cccHHHHHHHChhHHHHhcCcccC-----CChHHHHHHH
Confidence 10000 001334444443 44555666665 9999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+++|++|+|||||.||-|.-..+|.+.++++.++.+.||+++ .|+...+.+++||.++|.+|+++++|+.+++.
T Consensus 147 iaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLV-EQn~~~Al~iaDr~yvle~Griv~~G~~~eL~ 225 (237)
T COG0410 147 IARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLV-EQNARFALEIADRGYVLENGRIVLSGTAAELL 225 (237)
T ss_pred HHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEE-eccHHHHHHhhCEEEEEeCCEEEEecCHHHHh
Confidence 99999999999999999999999999999999999987656666665 89999999999999999999999999999985
Q ss_pred H
Q 000860 236 E 236 (1250)
Q Consensus 236 ~ 236 (1250)
+
T Consensus 226 ~ 226 (237)
T COG0410 226 A 226 (237)
T ss_pred c
Confidence 4
No 330
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.48 Aligned_cols=221 Identities=25% Similarity=0.337 Sum_probs=174.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~---~~~~G~i~~~g 725 (1250)
.+.++|+++.+. ++.+|+++|++|++||+++|+|||||||||||++|+|..++ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 589999998873 23589999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000860 726 YPKEQ-----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPK---------EIS-KDQRHEFVEEVMSLVELDSLR 790 (1250)
Q Consensus 726 ~~~~~-----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~---------~~~-~~~~~~~v~~~l~~l~l~~~~ 790 (1250)
.++.. ...++.++|++|++.+++ .||+||+.+........ ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87542 134567999999988887 59999999865421100 011 123356688899999885322
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhc
Q 000860 791 HALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFD 870 (1250)
Q Consensus 791 ~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 870 (1250)
+.... .....||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12246999999999999999999999999999999999999999999999876 589999999985 5678899
Q ss_pred cee-eeecCcEEEEeCCC
Q 000860 871 ELL-LMKRGGRVIYGGKL 887 (1250)
Q Consensus 871 ~v~-~l~~gg~~~~~g~~ 887 (1250)
+++ +|.+ |+++..|+.
T Consensus 268 ~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTG-GELVEYDDT 284 (305)
T ss_pred EEEEEecC-CEEEEeCCH
Confidence 975 6664 799988875
No 331
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.1e-34 Score=327.73 Aligned_cols=191 Identities=28% Similarity=0.381 Sum_probs=163.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.+|||+|++.+++.+||+||+.|.++..+..
T Consensus 35 i~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 111 (306)
T PRK13537 35 CFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLS 111 (306)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999865 99999999987532 34678999999999999999999999865543211
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + ...+++++++.+||.+..++.++. ||||||||++||+
T Consensus 112 ~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~la~ 151 (306)
T PRK13537 112 AA-----------A------------------------ARALVPPLLEFAKLENKADAKVGE-----LSGGMKRRLTLAR 151 (306)
T ss_pred HH-----------H------------------------HHHHHHHHHHHcCCchHhcCchhh-----CCHHHHHHHHHHH
Confidence 10 0 011256788999999888888865 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|++|+|||||+|||+.++.++++.|+++.+ .|+|++++ +|+..++.++||+|++|++|++++.|+++++.+
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~-sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLT-THFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEE-CCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999865 47888887 456788899999999999999999999998864
No 332
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6e-34 Score=350.35 Aligned_cols=215 Identities=23% Similarity=0.298 Sum_probs=177.0
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECC----
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISG---- 725 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g---- 725 (1250)
++++|++++|. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+..+.+|+|.++|
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~ 67 (520)
T TIGR03269 1 IEVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCE 67 (520)
T ss_pred CEEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccc
Confidence 36788888773 2468999999999999999999999999999999999741013579999872
Q ss_pred -------------------ccCC----------c---ccccceEEEEcCC-CCCCCCCCHHHHHHHHHhcCCCCCCCHHH
Q 000860 726 -------------------YPKE----------Q---STFARISGYVEQE-DVHSPQVTIEESLWFSANLRLPKEISKDQ 772 (1250)
Q Consensus 726 -------------------~~~~----------~---~~~~~~~~yv~q~-~~~~~~ltv~e~l~~~~~l~~~~~~~~~~ 772 (1250)
.++. . ..+++.++|++|+ +.+++.+||+|++.+..... ..+.++
T Consensus 68 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~ 144 (520)
T TIGR03269 68 KCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKE 144 (520)
T ss_pred cccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 2110 0 1235679999997 67888899999998865432 233445
Q ss_pred HHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CC
Q 000860 773 RHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TG 851 (1250)
Q Consensus 773 ~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g 851 (1250)
.+++++++++.+||.+..++.+++ |||||||||+|||||+.+|++|+|||||+|||+.++..+++.|+++++ .|
T Consensus 145 ~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g 219 (520)
T TIGR03269 145 AVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG 219 (520)
T ss_pred HHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 567889999999998887777654 999999999999999999999999999999999999999999999865 48
Q ss_pred CEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 852 RTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 852 ~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
+|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 220 ~tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 220 ISMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred cEEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 99999999985 46678999999986 788888875
No 333
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=330.05 Aligned_cols=208 Identities=20% Similarity=0.289 Sum_probs=172.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+... ..+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~~----------~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDG----------EYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA 88 (549)
T ss_pred eeEEEEEEEecCCC----------ccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee
Confidence 47788887765321 12469999999999999999999999999999999999876 3589999999641
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
++.+...+.+.+||+|++.+..... ..+.++..++++++++.+++.+..++.++ .|||||||
T Consensus 89 ----------~i~~~~~l~~~lTV~EnL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~~-----~LSGGQrQ 150 (549)
T PRK13545 89 ----------LIAISSGLNGQLTGIENIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPVK-----TYSSGMKS 150 (549)
T ss_pred ----------eEEeccccCCCCcHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCcc-----cCCHHHHH
Confidence 1222344567789999998754332 23344555678889999999888777765 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
|++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...||++++|.+ |++++.|+.+
T Consensus 151 RVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 151 RLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999999999999999999998777999999999985 57788999999985 7888888763
No 334
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=6.3e-34 Score=304.87 Aligned_cols=184 Identities=24% Similarity=0.313 Sum_probs=153.6
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.+||.++.
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~ 67 (200)
T cd03217 1 LEIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDIT 67 (200)
T ss_pred CeEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECC
Confidence 35788888763 23589999999999999999999999999999999997421146899999998764
Q ss_pred cc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 730 QS---T-FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 730 ~~---~-~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
.. . .++.++|++|++.+++..|+++++. ... ..||||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l~----------------------------------~~~-----~~LS~G 108 (200)
T cd03217 68 DLPPEERARLGIFLAFQYPPEIPGVKNADFLR----------------------------------YVN-----EGFSGG 108 (200)
T ss_pred cCCHHHHhhCcEEEeecChhhccCccHHHHHh----------------------------------hcc-----ccCCHH
Confidence 31 1 2345999999998888888887650 000 249999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHH-hhcceeeeecCcEEEEe
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFE-AFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~-~~d~v~~l~~gg~~~~~ 884 (1250)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++.|+|||+++|++. .+.. .+|++++|++ |++...
T Consensus 109 ~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~ 186 (200)
T cd03217 109 EKKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKS 186 (200)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999777899999999985 4545 6999999985 788888
Q ss_pred CCC
Q 000860 885 GKL 887 (1250)
Q Consensus 885 g~~ 887 (1250)
|+.
T Consensus 187 ~~~ 189 (200)
T cd03217 187 GDK 189 (200)
T ss_pred ccH
Confidence 854
No 335
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=7.5e-34 Score=314.28 Aligned_cols=198 Identities=26% Similarity=0.362 Sum_probs=166.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 578999998873 2358999999999999999999999999999999999876 35799999872
Q ss_pred CcccccceEEEEcCCCCCCCC--CCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQ--VTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~--ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
..++|++|++.+++. .|+++++.+. .... ++++.++++.+++.+..++.+. .|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPMQ-----KLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCChh-----hCCHHH
Confidence 358999999877765 4777766431 1111 2346789999999888777665 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. + +++..|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999985 5778899999995 4 577777
Q ss_pred CC
Q 000860 886 KL 887 (1250)
Q Consensus 886 ~~ 887 (1250)
+.
T Consensus 203 ~~ 204 (251)
T PRK09544 203 TP 204 (251)
T ss_pred CH
Confidence 75
No 336
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.6e-34 Score=316.66 Aligned_cols=207 Identities=28% Similarity=0.398 Sum_probs=165.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++.. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 78 (226)
T cd03248 11 IVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQ--PQGGQVLLDGKPI 78 (226)
T ss_pred eEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCcEEEECCCch
Confidence 58999999987431 12358999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHHc--CCcccccccccCCCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISK---DQRHEFVEEVMSLV--ELDSLRHALVGSPGSF 800 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~---~~~~~~v~~~l~~l--~l~~~~~~~v~~~~~~ 800 (1250)
.. ...++.++|++|++.+++ .||+||+.+..... .... ...+..+++.++.+ |+.+..+..+.
T Consensus 79 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~----- 149 (226)
T cd03248 79 SQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSC---SFECVKEAAQKAHAHSFISELASGYDTEVGEKGS----- 149 (226)
T ss_pred HHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCC---CHHHHHHHHHHcCcHHHHHhccccccchhhcCCC-----
Confidence 32 234567999999988775 69999997653211 1111 11112356777777 67766555553
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++ ..+|++++|++ |+
T Consensus 150 ~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~-g~ 225 (226)
T cd03248 150 QLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLS-TV-ERADQILVLDG-GR 225 (226)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHH-HH-HhCCEEEEecC-Cc
Confidence 5999999999999999999999999999999999999999999999865 689999999985 45 56999999986 44
No 337
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2e-34 Score=332.58 Aligned_cols=192 Identities=22% Similarity=0.353 Sum_probs=163.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCcee--eEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKS--GSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~--G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+|||||||||||++|+|+.+|+ + |+|.++|.++.... .++.++||+|+..+++++||+||+.|+.+.++.
T Consensus 33 ~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~ 109 (362)
T TIGR03258 33 LLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKM 109 (362)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999865 7 99999999875432 356799999999999999999999998654321
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
... + .+.+++++++.+||.+..++.+++ |||||||||+||
T Consensus 110 ~~~-----------~------------------------~~~~v~~~l~~~gL~~~~~~~~~~-----LSgGq~QRvaLA 149 (362)
T TIGR03258 110 PKA-----------D------------------------IAERVADALKLVGLGDAAAHLPAQ-----LSGGMQQRIAIA 149 (362)
T ss_pred CHH-----------H------------------------HHHHHHHHHHhcCCCchhhCChhh-----CCHHHHHHHHHH
Confidence 100 0 011367889999999888877754 999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhC-CCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQM-DATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~-~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|||+.+|++|||||||||||+.++.++.+.|+++.++. |.|+|++ +|+..++..++|+|++|++|+++..|+++++.+
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~v-THd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCV-THDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988764 6787776 466788899999999999999999999998743
No 338
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.7e-34 Score=300.62 Aligned_cols=171 Identities=25% Similarity=0.425 Sum_probs=149.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.+ +|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~-----------------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 64 (182)
T cd03215 4 VLEVRGLSVKG-----------------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPV 64 (182)
T ss_pred EEEEeccEEEe-----------------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 47888887643 6999999999999999999999999999999999876 3579999999876
Q ss_pred Ccc----cccceEEEEcCCC---CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 729 EQS----TFARISGYVEQED---VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~~----~~~~~~~yv~q~~---~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
... ..++.++|++|++ .+++.+|++||+.+...
T Consensus 65 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~t~~e~l~~~~~---------------------------------------- 104 (182)
T cd03215 65 TRRSPRDAIRAGIAYVPEDRKREGLVLDLSVAENIALSSL---------------------------------------- 104 (182)
T ss_pred CccCHHHHHhCCeEEecCCcccCcccCCCcHHHHHHHHhh----------------------------------------
Confidence 432 2456799999984 57888999999876421
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|+++ ++.+.+|++++|++ |+
T Consensus 105 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 105 LSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 8999999999999999999999999999999999999999999998777899999999974 57788999999986 44
No 339
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4e-34 Score=353.86 Aligned_cols=212 Identities=26% Similarity=0.427 Sum_probs=173.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. +++++|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 316 ~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~i~~~g~~i 382 (544)
T TIGR01842 316 HLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWP--PTSGSVRLDGADL 382 (544)
T ss_pred eEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeh
Confidence 5899999998842 23468999999999999999999999999999999999876 4589999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-------SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~v~~~~ 798 (1250)
.. ..+++.++||+|++.+++. |++||+.+.. .+.++++ +.++++..++. +-.|+.+|+.
T Consensus 383 ~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~~----~~~~~~~~~~~~~i~~l~~gl~t~~~~~- 451 (544)
T TIGR01842 383 KQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPEK----IIEAAKLAGVHELILRLPDGYDTVIGPG- 451 (544)
T ss_pred hhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHHH----HHHHHHHhChHHHHHhCccccccccCCC-
Confidence 43 3567889999999998875 9999997432 1233333 33333433332 2345666653
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||||+++|++++|||||||||+.++..+.+.|+++..+|+|+|+++|+++ ..+.+|++++|++
T Consensus 452 g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~i~~l~~- 528 (544)
T TIGR01842 452 GATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDKILVLQD- 528 (544)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999998656899999999984 5678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|++++.|+.
T Consensus 529 G~i~~~g~~ 537 (544)
T TIGR01842 529 GRIARFGER 537 (544)
T ss_pred CEEEeeCCH
Confidence 799998885
No 340
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=354.42 Aligned_cols=219 Identities=21% Similarity=0.280 Sum_probs=180.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|.... +..++|+||||++++||++||+||||||||||+++|+|..++ .+|+|.++|..+
T Consensus 12 ~l~v~~l~~~y~~~~---------~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p--~~G~i~~~g~~~ 80 (623)
T PRK10261 12 VLAVENLNIAFMQEQ---------QKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQ--AGGLVQCDKMLL 80 (623)
T ss_pred eEEEeceEEEecCCC---------CceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCC--CCeEEEECCEEe
Confidence 589999999885311 134699999999999999999999999999999999998753 479999888532
Q ss_pred C-------------cc---cc-cceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-
Q 000860 729 E-------------QS---TF-ARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS- 788 (1250)
Q Consensus 729 ~-------------~~---~~-~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~- 788 (1250)
. .. .+ ++.+|||+|++ .++|.+||.|++.+...... ..+..+.+++++++++.+||.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~ 158 (623)
T PRK10261 81 RRRSRQVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQ--GASREEAMVEAKRMLDQVRIPEA 158 (623)
T ss_pred ccccccccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCCh
Confidence 1 11 12 24689999997 67888999999998765421 2344556678899999999963
Q ss_pred --cccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHH
Q 000860 789 --LRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEI 865 (1250)
Q Consensus 789 --~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~ 865 (1250)
..+..+. .|||||||||+||+||+.+|++|+|||||++||+.++..+.+.|++++++ |+|||+++|++. .+
T Consensus 159 ~~~~~~~~~-----~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~-~~ 232 (623)
T PRK10261 159 QTILSRYPH-----QLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMG-VV 232 (623)
T ss_pred hhHHhCCCc-----cCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HH
Confidence 3556554 49999999999999999999999999999999999999999999999755 899999999975 57
Q ss_pred HHhhcceeeeecCcEEEEeCCC
Q 000860 866 FEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 866 ~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
...+|+|++|++ |+++..|+.
T Consensus 233 ~~~adri~vl~~-G~i~~~g~~ 253 (623)
T PRK10261 233 AEIADRVLVMYQ-GEAVETGSV 253 (623)
T ss_pred HHhCCEEEEeeC-CeecccCCH
Confidence 789999999985 788888875
No 341
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.9e-34 Score=332.44 Aligned_cols=191 Identities=25% Similarity=0.367 Sum_probs=163.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++.... .++.++||+|+..+||++||+||+.|+.+.++...
T Consensus 42 ~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~ 118 (375)
T PRK09452 42 FLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPA 118 (375)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCH
Confidence 47999999999999999999999865 999999999885432 35779999999999999999999999865332110
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. + .+.+++++++.+||.+..+..+. +|||||||||+||||
T Consensus 119 ~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~QRVaLARa 158 (375)
T PRK09452 119 A-----------E------------------------ITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQQRVAIARA 158 (375)
T ss_pred H-----------H------------------------HHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHH
Confidence 0 0 01136788999999988887765 499999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++||||||||+||+.++.++.+.|+++.++.+.|+|++ +|+..++..++|+|++|++|+++..|+++++.
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~v-THd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFV-THDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999987668888876 46678899999999999999999999998874
No 342
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.4e-34 Score=311.55 Aligned_cols=209 Identities=26% Similarity=0.348 Sum_probs=166.6
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. .++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 68 (221)
T cd03244 2 DIEFKNVSLRYRP-----------NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVE--LSSGSILIDGVDI 68 (221)
T ss_pred cEEEEEEEEecCC-----------CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCCEEEECCEEh
Confidence 3688999987742 12469999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHA-------LVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~v~~~~ 798 (1250)
.. ..+++.++|++|++.+++ .||+||+.+.. ... .+.+.+.++.+++.+..++ ..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~------~~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~-~~ 136 (221)
T cd03244 69 SKIGLHDLRSRISIIPQDPVLFS-GTIRSNLDPFG------EYS----DEELWQALERVGLKEFVESLPGGLDTVVE-EG 136 (221)
T ss_pred HhCCHHHHhhhEEEECCCCcccc-chHHHHhCcCC------CCC----HHHHHHHHHHhCcHHHHHhcccccccccc-cC
Confidence 42 245678999999988775 59999986421 111 1235566666776554332 111 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++ ..+|++++|++
T Consensus 137 ~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~i~~l~~- 212 (221)
T cd03244 137 GENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLD-TI-IDSDRILVLDK- 212 (221)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-hhCCEEEEEEC-
Confidence 356999999999999999999999999999999999999999999999864 689999999985 34 45999999985
Q ss_pred cEEEEeCC
Q 000860 879 GRVIYGGK 886 (1250)
Q Consensus 879 g~~~~~g~ 886 (1250)
|++++.|+
T Consensus 213 g~~~~~~~ 220 (221)
T cd03244 213 GRVVEFDS 220 (221)
T ss_pred CeEEecCC
Confidence 78887775
No 343
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.3e-33 Score=347.89 Aligned_cols=221 Identities=22% Similarity=0.316 Sum_probs=180.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 725 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~---~~~G~i~~~g 725 (1250)
.++++|+++.|+.. ...+.+|+|+||++++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQ---------QTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCC---------CCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 48899999987421 01246999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCcc------ccc-ceEEEEcCCCC--CCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccc---cccc
Q 000860 726 YPKEQS------TFA-RISGYVEQEDV--HSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSL---RHAL 793 (1250)
Q Consensus 726 ~~~~~~------~~~-~~~~yv~q~~~--~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~ 793 (1250)
.++... ..+ +.+||++|++. +.+.+|++|++.+..... ...+..+.+++++++++.+||.+. .++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLH--RGMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 876431 122 46999999974 567789999987654321 123345566788999999999763 4666
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcce
Q 000860 794 VGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 794 v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
++ .|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. .+...+|++
T Consensus 154 ~~-----~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri 227 (529)
T PRK15134 154 PH-----QLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRV 227 (529)
T ss_pred Cc-----ccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEE
Confidence 65 49999999999999999999999999999999999999999999999765 899999999985 567789999
Q ss_pred eeeecCcEEEEeCCC
Q 000860 873 LLMKRGGRVIYGGKL 887 (1250)
Q Consensus 873 ~~l~~gg~~~~~g~~ 887 (1250)
++|++ |++++.|+.
T Consensus 228 ~~l~~-G~i~~~g~~ 241 (529)
T PRK15134 228 AVMQN-GRCVEQNRA 241 (529)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 788888775
No 344
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=5.3e-34 Score=299.89 Aligned_cols=176 Identities=27% Similarity=0.490 Sum_probs=149.5
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 i~~~~~~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (178)
T cd03247 1 LSINNVSFSYPE-----------QEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLK--PQQGEITLDGVPVS 67 (178)
T ss_pred CEEEEEEEEeCC-----------CCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCEEHH
Confidence 367888887642 12358999999999999999999999999999999999865 35799999998653
Q ss_pred c--ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 730 Q--STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 730 ~--~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
. ..+++.++|++|++.+++ .|++||+ + ..||||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~i-------------------------------------~-----~~LS~G~~ 104 (178)
T cd03247 68 DLEKALSSLISVLNQRPYLFD-TTLRNNL-------------------------------------G-----RRFSGGER 104 (178)
T ss_pred HHHHHHHhhEEEEccCCeeec-ccHHHhh-------------------------------------c-----ccCCHHHH
Confidence 2 234667999999987775 6998876 1 24999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||++|||+|+.+|++++|||||+|||+.++..+++.|+++. +++|||+++|++. ++ ..+|++++|++ |++++.|
T Consensus 105 qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~~~~l~~-g~i~~~~ 178 (178)
T cd03247 105 QRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVL-KDKTLIWITHHLT-GI-EHMDKILFLEN-GKIIMQG 178 (178)
T ss_pred HHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999985 5899999999985 34 57999999985 7877654
No 345
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=316.27 Aligned_cols=208 Identities=28% Similarity=0.445 Sum_probs=162.1
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~ 67 (236)
T cd03253 2 EFENVTFAYDP------------GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIRE 67 (236)
T ss_pred EEEEEEEEeCC------------CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhh
Confidence 57888877631 2358999999999999999999999999999999999875 458999999987542
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCC
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHA-------LVGSPGSF 800 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~v~~~~~~ 800 (1250)
..+++.++|++|++.+++ .||+||+.+... ..+..+ +.+.++..++.+..+. .... ..+
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~----~~~~~~~~~l~~~~~~l~~~~~~~~~~-~~~ 136 (236)
T cd03253 68 VTLDSLRRAIGVVPQDTVLFN-DTIGYNIRYGRP-----DATDEE----VIEAAKAAQIHDKIMRFPDGYDTIVGE-RGL 136 (236)
T ss_pred CCHHHHHhhEEEECCCChhhc-chHHHHHhhcCC-----CCCHHH----HHHHHHHcCcHHHHHhccccccchhhc-CCC
Confidence 234567999999988775 699999977531 112221 2233333333322111 1111 134
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ |+|||+++|++. .+ ..+|++++|++ |+
T Consensus 137 ~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~-~~~d~~~~l~~-g~ 212 (236)
T cd03253 137 KLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLS-TI-VNADKIIVLKD-GR 212 (236)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HH-HhCCEEEEEEC-CE
Confidence 6999999999999999999999999999999999999999999999876 999999999985 34 55999999986 78
Q ss_pred EEEeCCC
Q 000860 881 VIYGGKL 887 (1250)
Q Consensus 881 ~~~~g~~ 887 (1250)
++..|+.
T Consensus 213 i~~~~~~ 219 (236)
T cd03253 213 IVERGTH 219 (236)
T ss_pred EEeeCCH
Confidence 8887764
No 346
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=297.43 Aligned_cols=190 Identities=27% Similarity=0.315 Sum_probs=160.1
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc----cccceEEeecccc--ccCCCCCHHHHHHHHHHcc
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF----QVQRASAYIGQTD--NHIAELTVRETLDFAARCQ 75 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~--~~~~~~TV~e~l~f~~~~~ 75 (1250)
.+|+|+||||||||.++|+|+.+|. +|+|.++|.+.... ..++.+-+|+|++ .+-|..||++.|.-+.+..
T Consensus 36 lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~ 112 (252)
T COG1124 36 LGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH 112 (252)
T ss_pred EEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC
Confidence 6899999999999999999999875 99999999877543 3567899999996 7888999999997665443
Q ss_pred CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhH
Q 000860 76 GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
+.+.. ++++.++|+.+||++..-. +...+|||||||||+
T Consensus 113 ~~~~~-------------------------------------~~~i~~~L~~VgL~~~~l~----R~P~eLSGGQ~QRia 151 (252)
T COG1124 113 GLSKS-------------------------------------QQRIAELLDQVGLPPSFLD----RRPHELSGGQRQRIA 151 (252)
T ss_pred CccHH-------------------------------------HHHHHHHHHHcCCCHHHHh----cCchhcChhHHHHHH
Confidence 22110 1125678999999764322 234569999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||..+|++||||||||+||+..+.+|++.|.++.++++.|.+++ +|+..-+..+||||+||++|++++.++.+++.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~I-sHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFI-SHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEE-eCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 99999999999999999999999999999999999998888888876 67788888999999999999999999999986
Q ss_pred H
Q 000860 236 E 236 (1250)
Q Consensus 236 ~ 236 (1250)
.
T Consensus 231 ~ 231 (252)
T COG1124 231 S 231 (252)
T ss_pred c
Confidence 4
No 347
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-35 Score=301.52 Aligned_cols=190 Identities=25% Similarity=0.409 Sum_probs=167.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 000860 680 NVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQEDVHSPQVTI 752 (1250)
Q Consensus 680 ~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~yv~q~~~~~~~ltv 752 (1250)
++++..+.-.++||-|+||||||||+|+|+|... +.+|.|.+||..... ...+|++|||+||..+||++||
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~r--PdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tV 93 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTR--PDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTV 93 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCC--ccccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEE
Confidence 6778877767999999999999999999999876 458999999975321 2357889999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000860 753 EESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 832 (1250)
Q Consensus 753 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgL 832 (1250)
+.||.|+..-- .....+++.+.||++|..++...+ |||||||||+|+|||+++|++|+||||.++|
T Consensus 94 rgNL~YG~~~~---------~~~~fd~iv~lLGI~hLL~R~P~~-----LSGGEkQRVAIGRALLt~P~LLLmDEPLaSL 159 (352)
T COG4148 94 RGNLRYGMWKS---------MRAQFDQLVALLGIEHLLDRYPGT-----LSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred ecchhhhhccc---------chHhHHHHHHHhCcHHHHhhCCCc-----cCcchhhHHHHHHHHhcCCCeeeecCchhhc
Confidence 99999985321 233468899999999999998865 9999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 833 DARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 833 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|-....+++-.|.+++++ +..|+.++|.+. |+..++|+|++|++ |++...|+.
T Consensus 160 D~~RK~EilpylERL~~e~~IPIlYVSHS~~-Ev~RLAd~vV~le~-GkV~A~g~~ 213 (352)
T COG4148 160 DLPRKREILPYLERLRDEINIPILYVSHSLD-EVLRLADRVVVLEN-GKVKASGPL 213 (352)
T ss_pred ccchhhHHHHHHHHHHHhcCCCEEEEecCHH-HHHhhhheEEEecC-CeEEecCcH
Confidence 999999999999999876 789999999984 79999999999985 899999986
No 348
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=7.5e-34 Score=297.10 Aligned_cols=168 Identities=31% Similarity=0.496 Sum_probs=146.1
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. .++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 68 (173)
T cd03246 2 EVENVSFRYPG-----------AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLR--PTSGRVRLDGADISQ 68 (173)
T ss_pred EEEEEEEEcCC-----------CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCeEEECCEEccc
Confidence 57888887642 12458999999999999999999999999999999999866 357999999987643
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
..+++.++|++|++.+++ .||+||+ ||||||
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~l---------------------------------------------LS~G~~ 102 (173)
T cd03246 69 WDPNELGDHVGYLPQDDELFS-GSIAENI---------------------------------------------LSGGQR 102 (173)
T ss_pred CCHHHHHhheEEECCCCcccc-CcHHHHC---------------------------------------------cCHHHH
Confidence 234667999999988777 4999875 899999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. .+ ..+|++++|++ |+
T Consensus 103 qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 172 (173)
T cd03246 103 QRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPE-TL-ASADRILVLED-GR 172 (173)
T ss_pred HHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhCCEEEEEEC-CC
Confidence 9999999999999999999999999999999999999999777999999999974 34 68999999986 44
No 349
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=299.34 Aligned_cols=204 Identities=24% Similarity=0.351 Sum_probs=167.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccc----cceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQV----QRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+|+|+|.++|+ +|+|.++|++++.... +.-++.-+|...+|+++||.||+..+...+.
T Consensus 32 i~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~ 108 (250)
T COG0411 32 IVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARL 108 (250)
T ss_pred EEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhh
Confidence 58999999999999999999999975 9999999999975543 4457888999999999999999998865432
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.- .......+..+. ..+..+++.++|+.+||.+.+|++.|+ ||+|||||+.|
T Consensus 109 ~~----~~~l~~~~~~~~-------------------e~~~~e~A~~~Le~vgL~~~a~~~A~~-----LsyG~qR~LEI 160 (250)
T COG0411 109 GL----SGLLGRPRARKE-------------------EREARERARELLEFVGLGELADRPAGN-----LSYGQQRRLEI 160 (250)
T ss_pred hh----hhhhccccchhh-------------------HHHHHHHHHHHHHHcCCchhhcchhhc-----CChhHhHHHHH
Confidence 10 000000000000 001123467899999999999999987 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||||+++|++||||||.+||.+....++.+.|+++.++.|.|+++ |.|+..-+..+||||+||+.|+++.+|+|+++.+
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~till-IEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILL-IEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEE-EEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999999999999999998765677666 4788999999999999999999999999999864
No 350
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=6.4e-34 Score=355.72 Aligned_cols=210 Identities=29% Similarity=0.414 Sum_probs=175.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. ++++|+|+|++++|||+++|+|+||||||||+|+|+|..++ .+|+|.+||.++
T Consensus 334 ~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~i 399 (588)
T PRK13657 334 AVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTDI 399 (588)
T ss_pred eEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEEh
Confidence 5899999999852 23589999999999999999999999999999999998763 589999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
.. ..+++.++||||++.+++ .|++||+.++. | +.++++ +.++++..++.+ -.|+.+|+.
T Consensus 400 ~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~-~~~d~~----i~~al~~~~l~~~i~~lp~gldt~i~~~- 468 (588)
T PRK13657 400 RTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR----P-DATDEE----MRAAAERAQAHDFIERKPDGYDTVVGER- 468 (588)
T ss_pred hhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhCHHHHHHhCcccccchhcCC-
Confidence 53 457788999999998885 59999998752 1 233333 445555555443 356777653
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
+..||||||||++|||+|+++|+|++||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.+|++++|++
T Consensus 469 g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~--~~~~~D~ii~l~~- 544 (588)
T PRK13657 469 GRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLS--TVRNADRILVFDN- 544 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHH--HHHhCCEEEEEEC-
Confidence 35699999999999999999999999999999999999999999999874 4899999999974 5788999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 545 G~i~~~g~~ 553 (588)
T PRK13657 545 GRVVESGSF 553 (588)
T ss_pred CEEEEeCCH
Confidence 788888874
No 351
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.6e-34 Score=354.82 Aligned_cols=192 Identities=26% Similarity=0.442 Sum_probs=157.1
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+||+|+||||||||+|+|+|+++|. +|+|++||.|+.+. ..|+.+|||+|++.+| +.||+||+.++...
T Consensus 502 vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~p~---- 573 (709)
T COG2274 502 VAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGNPE---- 573 (709)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCCCC----
Confidence 7999999999999999999999975 99999999998654 4689999999996665 57999999875321
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.+ .++.++++...+- .+. ...++..+||.||+.+ .+||||||||++|||
T Consensus 574 ~~----------------------~e~i~~A~~~ag~-----~~f---I~~lP~gy~t~v~E~G-~~LSGGQrQrlalAR 622 (709)
T COG2274 574 AT----------------------DEEIIEAAQLAGA-----HEF---IENLPMGYDTPVGEGG-ANLSGGQRQRLALAR 622 (709)
T ss_pred CC----------------------HHHHHHHHHHhCc-----HHH---HHhcccccccccccCC-CCCCHHHHHHHHHHH
Confidence 11 0111111111110 112 3358889999999765 569999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|+||+||||||+||+.+++.|.+.|.++.+ |+|+|++.|+ ..+.+.+|||+||++|+++++|+++|+.+
T Consensus 623 aLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHR--l~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 623 ALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHR--LSTIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred HhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEcc--chHhhhccEEEEccCCceeccCCHHHHHH
Confidence 99999999999999999999999999999999864 6888887554 57889999999999999999999999876
No 352
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.8e-34 Score=324.76 Aligned_cols=191 Identities=27% Similarity=0.417 Sum_probs=162.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.++.++..
T Consensus 21 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 97 (302)
T TIGR01188 21 VFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLP 97 (302)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999865 99999999987432 34567999999999999999999999876543211
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + .+.+++++++.+||.+..++.++. |||||||||+||+
T Consensus 98 ~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~la~ 137 (302)
T TIGR01188 98 KD-----------E------------------------AEERAEELLELFELGEAADRPVGT-----YSGGMRRRLDIAA 137 (302)
T ss_pred HH-----------H------------------------HHHHHHHHHHHcCChhHhCCchhh-----CCHHHHHHHHHHH
Confidence 00 0 011256789999999888887765 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|+|++ +|+..++.+.||+|++|++|++++.|+++++.+
T Consensus 138 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvi~~-sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 138 SLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE-GVTILLT-THYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEE-CCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 999999999999999999999999999999998754 7888877 456788889999999999999999999998765
No 353
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3e-34 Score=354.70 Aligned_cols=187 Identities=27% Similarity=0.431 Sum_probs=157.7
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++|.|+. ++++|+|+|++++|||++||+||||||||||+|+|+|..+ +.+|+|.+||.++
T Consensus 334 ~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~--p~~G~I~i~g~~i 399 (529)
T TIGR02868 334 TLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLD--PLQGEVTLDGVSV 399 (529)
T ss_pred eEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEh
Confidence 5899999999852 2358999999999999999999999999999999999876 4589999999875
Q ss_pred C--cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCC
Q 000860 729 E--QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPGS 799 (1250)
Q Consensus 729 ~--~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~~ 799 (1250)
+ ...+++.++||||++.+|+ .|++||+.++. | +.+++ .++++++..++.+ -.||.+|+.+
T Consensus 400 ~~~~~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~----~-~~~~e----~i~~al~~a~l~~~i~~lp~GldT~ige~G- 468 (529)
T TIGR02868 400 SSLQDELRRRISVFAQDAHLFD-TTVRDNLRLGR----P-DATDE----ELWAALERVGLADWLRSLPDGLDTVLGEGG- 468 (529)
T ss_pred hhHHHHHHhheEEEccCccccc-ccHHHHHhccC----C-CCCHH----HHHHHHHHcCCHHHHHhCcccccchhcccc-
Confidence 5 3566789999999999885 59999998752 1 23333 3566666666543 4578888744
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCC
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQP 861 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 861 (1250)
..||||||||++|||||+++|+||+||||||+||++++..+++.|+++. +++|+|+++|++
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 4699999999999999999999999999999999999999999999863 589999999985
No 354
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.4e-33 Score=301.93 Aligned_cols=201 Identities=21% Similarity=0.306 Sum_probs=153.9
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..+-++||+|.|+ +.++++++++|-|.=-..+||+||||.||||||++|.|...+ ..|+..-
T Consensus 585 PvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RK---- 646 (807)
T KOG0066|consen 585 PVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRK---- 646 (807)
T ss_pred CeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhc----
Confidence 3578899998875 356789999999999999999999999999999999998764 3455432
Q ss_pred CCcccccceEEEEcCCC--CCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 728 KEQSTFARISGYVEQED--VHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 728 ~~~~~~~~~~~yv~q~~--~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
..+-+||+..|.. .+-...|..|.|.-..++ +. +.....+..+||...++|+- ...||||
T Consensus 647 ----nhrL~iG~FdQh~~E~L~~Eetp~EyLqr~FNl------py----q~ARK~LG~fGL~sHAHTik----ikdLSGG 708 (807)
T KOG0066|consen 647 ----NHRLRIGWFDQHANEALNGEETPVEYLQRKFNL------PY----QEARKQLGTFGLASHAHTIK----IKDLSGG 708 (807)
T ss_pred ----cceeeeechhhhhHHhhccccCHHHHHHHhcCC------Ch----HHHHHHhhhhhhhhccceEe----eeecCCc
Confidence 2334688888873 344566777776533222 22 22456788899999888863 2469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
||-||++|..-++.|+||||||||++||.++...+.+.|++. ...||+++|+.+. +.+--..+.|+.+.|.-.-.|
T Consensus 709 QKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdG 784 (807)
T KOG0066|consen 709 QKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDG 784 (807)
T ss_pred chHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhccc
Confidence 999999999999999999999999999999999999999876 4589999999653 444445677776656555555
Q ss_pred CCC
Q 000860 886 KLG 888 (1250)
Q Consensus 886 ~~~ 888 (1250)
..+
T Consensus 785 dFe 787 (807)
T KOG0066|consen 785 DFE 787 (807)
T ss_pred cHH
Confidence 543
No 355
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-34 Score=312.43 Aligned_cols=192 Identities=28% Similarity=0.380 Sum_probs=158.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 104 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLRE 104 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhh
Confidence 47999999999999999999999865 99999999887532 2356799999999999999999999886432
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
... ... .+ ...+++++++.+||.+..++.+++ |||||||||
T Consensus 105 ~~~-~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv 145 (235)
T cd03261 105 HTR-LSE---------EE------------------------IREIVLEKLEAVGLRGAEDLYPAE-----LSGGMKKRV 145 (235)
T ss_pred ccC-CCH---------HH------------------------HHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHH
Confidence 110 000 00 011256788999998777777654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|+++||||||+|||+.++..+.+.|++++++.++|+|++. |+..++.+++|++++|++|++++.|+++++
T Consensus 146 ~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vs-H~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 146 ALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVT-HDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-cCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999999999999999999998764577887764 556778889999999999999999998775
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 225 ~ 225 (235)
T cd03261 225 R 225 (235)
T ss_pred c
Confidence 3
No 356
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-34 Score=328.76 Aligned_cols=191 Identities=24% Similarity=0.339 Sum_probs=162.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-cccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++... ..++.+|||+|+..+|+++||.||+.|+.+.++...
T Consensus 47 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~ 123 (377)
T PRK11607 47 IFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPK 123 (377)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCH
Confidence 47999999999999999999999865 99999999987543 236789999999999999999999999865332110
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.+ .+++++++++.+||.+..+..+. +|||||||||+||||
T Consensus 124 -----------~~------------------------~~~~v~~~l~~l~L~~~~~~~~~-----~LSgGq~QRVaLARA 163 (377)
T PRK11607 124 -----------AE------------------------IASRVNEMLGLVHMQEFAKRKPH-----QLSGGQRQRVALARS 163 (377)
T ss_pred -----------HH------------------------HHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHH
Confidence 00 01236788999999887777665 499999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++||||||||+||+.++.++.+.|+++.++.+.|+|++ +|+..++..++|++++|++|+++..|+++++.
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~v-THd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMV-THDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-cCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999877668888876 56678899999999999999999999999874
No 357
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=304.50 Aligned_cols=192 Identities=22% Similarity=0.346 Sum_probs=169.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------c-cceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------V-QRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
|..|||-||||||||+++|.++.+|+ +|+|.++|.++.... . ++.++.|+|...++|+.||.||..|+.+
T Consensus 56 IfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe 132 (386)
T COG4175 56 IFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 132 (386)
T ss_pred EEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee
Confidence 57899999999999999999999975 999999999884332 2 4679999999999999999999999998
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.++.+... . ++++.+.|+..||....+..+. +||||+|||
T Consensus 133 v~Gv~~~e-----------r------------------------~~~a~~~l~~VgL~~~~~~yp~-----eLSGGMqQR 172 (386)
T COG4175 133 VQGVPKAE-----------R------------------------EERALEALELVGLEGYADKYPN-----ELSGGMQQR 172 (386)
T ss_pred ecCCCHHH-----------H------------------------HHHHHHHHHHcCchhhhhcCcc-----cccchHHHH
Confidence 88764321 1 1236778999999998887765 499999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|.|||||+.+|+|||+|||+|+|||--+.++.+.|.++.++.++|+|++ +|+.+|++++-|||.+|.+|+++..|+++|
T Consensus 173 VGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFi-tHDLdEAlriG~rIaimkdG~ivQ~Gtp~e 251 (386)
T COG4175 173 VGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFI-THDLDEALRIGDRIAIMKDGEIVQVGTPEE 251 (386)
T ss_pred HHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEE-ecCHHHHHhccceEEEecCCeEEEeCCHHH
Confidence 9999999999999999999999999999999999999988889999886 678999999999999999999999999999
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+..
T Consensus 252 Il~ 254 (386)
T COG4175 252 ILL 254 (386)
T ss_pred HHc
Confidence 864
No 358
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8e-34 Score=355.03 Aligned_cols=212 Identities=26% Similarity=0.400 Sum_probs=177.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+. .++++|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 330 ~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~--~~~G~I~i~g~~i 396 (571)
T TIGR02203 330 DVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYE--PDSGQILLDGHDL 396 (571)
T ss_pred eEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCeEEECCEeH
Confidence 5899999998853 13468999999999999999999999999999999999876 3579999999876
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+++.++||||++.+++ .|++||+.++. +.+.++ +.++++++.+|+.+ -.|+.+|+.
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~~l~~~~l~~~i~~lp~gldt~i~~~- 466 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQADR----AEIERALAAAYAQDFVDKLPLGLDTPIGEN- 466 (571)
T ss_pred HhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCCH----HHHHHHHHHcChHHHHHhCcCcccceecCC-
Confidence 43 456788999999998875 59999998652 112333 34566777776643 346777764
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
.+.||||||||++|||+++++|+|++||||||+||..+++.+++.|++++ +++|+|++||++ +..+.+|+|++|++
T Consensus 467 g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~--~~~~~~D~ii~l~~- 542 (571)
T TIGR02203 467 GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRL--STIEKADRIVVMDD- 542 (571)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhh--HHHHhCCEEEEEeC-
Confidence 35799999999999999999999999999999999999999999999874 579999999997 46788999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 543 g~i~~~g~~ 551 (571)
T TIGR02203 543 GRIVERGTH 551 (571)
T ss_pred CEEEeeCCH
Confidence 788888875
No 359
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=327.97 Aligned_cols=196 Identities=24% Similarity=0.386 Sum_probs=162.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++||+|+..+++++||+||+.|+.+......
T Consensus 30 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~ 106 (353)
T PRK10851 30 MVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRE 106 (353)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhccccc
Confidence 47999999999999999999999865 999999999885432 34679999999999999999999999764321000
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. ....+ .+++++++++.+||++..+..+.+ |||||||||+||||
T Consensus 107 ~-------~~~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~-----LSgGq~QRvalArA 150 (353)
T PRK10851 107 R-------PNAAA------------------------IKAKVTQLLEMVQLAHLADRYPAQ-----LSGGQKQRVALARA 150 (353)
T ss_pred C-------CCHHH------------------------HHHHHHHHHHHcCCchhhhCChhh-----CCHHHHHHHHHHHH
Confidence 0 00000 012367889999998887777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|+.+|++|||||||+|||+.++.++.+.|+++.++.+.|+|++ +|+..++..++|+|++|++|++++.|+++++.+
T Consensus 151 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~v-THd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 151 LAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFV-THDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999987667887776 566788999999999999999999999988743
No 360
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=292.37 Aligned_cols=217 Identities=27% Similarity=0.421 Sum_probs=181.5
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|++..+ ++++||+|+|.+|+|||..+|+|||||||||||++++|..++. +|.+.+.|+.
T Consensus 30 ~li~l~~v~v~r-------------~gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~ps--sg~~~~~G~~ 94 (257)
T COG1119 30 PLIELKNVSVRR-------------NGKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPS--SGDVTLLGRR 94 (257)
T ss_pred ceEEecceEEEE-------------CCEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCC--CCceeeeeee
Confidence 468999999876 3568999999999999999999999999999999999987643 7899999987
Q ss_pred CCc----ccccceEEEEcCC--CCCCCCCCHHHHHH--HHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000860 728 KEQ----STFARISGYVEQE--DVHSPQVTIEESLW--FSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGS 799 (1250)
Q Consensus 728 ~~~----~~~~~~~~yv~q~--~~~~~~ltv~e~l~--~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~ 799 (1250)
..+ .+.|+.||||.-+ ..+.+..+|+|-+. |.+..........++..+++..+++.+|+.+.+|+..+.
T Consensus 95 ~G~~~~~~elrk~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~la~r~~~~--- 171 (257)
T COG1119 95 FGKGETIFELRKRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKHLADRPFGS--- 171 (257)
T ss_pred ccCCcchHHHHHHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhhhccCchhh---
Confidence 533 4568899999744 33445778888653 222222222123456677889999999999999999876
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC--CCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT--GRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
||-|||||+-|||||+.+|.+||||||++|||...++.+.+.|.+++.. +.++|++||++. |+-..|++++++++
T Consensus 172 --LS~Ge~rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~e-Ei~~~~th~lll~~ 248 (257)
T COG1119 172 --LSQGEQRRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAE-EIPPCFTHRLLLKE 248 (257)
T ss_pred --cCHhHHHHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchh-hcccccceEEEeeC
Confidence 9999999999999999999999999999999999999999999999865 789999999985 78899999999985
Q ss_pred CcEEEEeCC
Q 000860 878 GGRVIYGGK 886 (1250)
Q Consensus 878 gg~~~~~g~ 886 (1250)
|+++++|.
T Consensus 249 -g~v~~~g~ 256 (257)
T COG1119 249 -GEVVAQGK 256 (257)
T ss_pred -Cceeeccc
Confidence 78988874
No 361
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=8.8e-34 Score=298.59 Aligned_cols=175 Identities=30% Similarity=0.463 Sum_probs=145.9
Q ss_pred EEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-
Q 000860 652 FHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ- 730 (1250)
Q Consensus 652 ~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~- 730 (1250)
++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~--~~~G~v~~~g~~~~~~ 66 (180)
T cd03214 2 VENLSVGYG-------------GRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLK--PSSGEILLDGKDLASL 66 (180)
T ss_pred eeEEEEEEC-------------CeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCcC
Confidence 567777663 2358999999999999999999999999999999999866 358999999987642
Q ss_pred --ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000860 731 --STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRK 808 (1250)
Q Consensus 731 --~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerq 808 (1250)
..+++.++|++| +++.+++.+..++.+. .|||||||
T Consensus 67 ~~~~~~~~i~~~~q-------------------------------------~l~~~gl~~~~~~~~~-----~LS~G~~q 104 (180)
T cd03214 67 SPKELARKIAYVPQ-------------------------------------ALELLGLAHLADRPFN-----ELSGGERQ 104 (180)
T ss_pred CHHHHHHHHhHHHH-------------------------------------HHHHcCCHhHhcCCcc-----cCCHHHHH
Confidence 123445677776 5556677665555543 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 809 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT-GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 809 r~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|+++ ++.+.+|++++|.+ |++.+.|
T Consensus 105 rl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~~~ 180 (180)
T cd03214 105 RVLLARALAQEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLN-LAARYADRVILLKD-GRIVAQG 180 (180)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998766 899999999985 56688999999985 6776543
No 362
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.07 Aligned_cols=191 Identities=28% Similarity=0.358 Sum_probs=162.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.+||++|++.+++.+||+||+.+.....+..
T Consensus 69 i~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 145 (340)
T PRK13536 69 CFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMS 145 (340)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999865 99999999987532 34678999999999999999999998755433211
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + ....++++++.+||++..++.+++ ||||||||++||+
T Consensus 146 ~~-----------~------------------------~~~~~~~ll~~~~L~~~~~~~~~~-----LS~G~kqrv~lA~ 185 (340)
T PRK13536 146 TR-----------E------------------------IEAVIPSLLEFARLESKADARVSD-----LSGGMKRRLTLAR 185 (340)
T ss_pred HH-----------H------------------------HHHHHHHHHHHcCCchhhCCChhh-----CCHHHHHHHHHHH
Confidence 00 0 001255678999999888888865 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|++|||||||+|||+.++.++++.|+++.+ .|+|+|++ +|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilis-SH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLT-THFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-CCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999876 48888887 456788999999999999999999999999864
No 363
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.6e-33 Score=298.18 Aligned_cols=191 Identities=19% Similarity=0.299 Sum_probs=158.5
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|++++++ ++.+++ +|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (195)
T PRK13541 2 LSLHQLQFNIE-------------QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQ--PSSGNIYYKNCNIN 65 (195)
T ss_pred eEEEEeeEEEC-------------CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCcccC
Confidence 67889998773 123555 999999999999999999999999999999866 35899999998765
Q ss_pred cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000860 730 QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKR 809 (1250)
Q Consensus 730 ~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr 809 (1250)
... ++.++|++|++.+++..||+||+.+..... . ..+.++++++.+++.+..++.++ .||||||||
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~---~-----~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~r 131 (195)
T PRK13541 66 NIA-KPYCTYIGHNLGLKLEMTVFENLKFWSEIY---N-----SAETLYAAIHYFKLHDLLDEKCY-----SLSSGMQKI 131 (195)
T ss_pred hhh-hhhEEeccCCcCCCccCCHHHHHHHHHHhc---c-----cHHHHHHHHHHcCCHhhhccChh-----hCCHHHHHH
Confidence 422 345899999987888899999998765332 1 13456788899999877777664 499999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcce
Q 000860 810 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDEL 872 (1250)
Q Consensus 810 ~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v 872 (1250)
++|||+|+.+|++++|||||+|||+.++..+.+.|++..++|+|||+++|+++ ....+|.+
T Consensus 132 l~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~i~~~~~~ 192 (195)
T PRK13541 132 VAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLES--SIKSAQIL 192 (195)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCcc--ccchhhee
Confidence 99999999999999999999999999999999999877677999999999985 34456654
No 364
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.4e-33 Score=301.67 Aligned_cols=198 Identities=25% Similarity=0.317 Sum_probs=159.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. .++.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~~-----------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 72 (207)
T cd03369 6 EIEVENLSVRYAP-----------DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLE--AEEGKIEIDGIDI 72 (207)
T ss_pred eEEEEEEEEEeCC-----------CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEh
Confidence 5789999988742 12358999999999999999999999999999999999866 3579999999875
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
.. ...++.++|++|++.+++ .||+||+.+.. ..+.+ .+.+.++ + +.. ...||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~~~l~~~~------~~~~~----~~~~~l~---~----~~~-----~~~LS~G 129 (207)
T cd03369 73 STIPLEDLRSSLTIIPQDPTLFS-GTIRSNLDPFD------EYSDE----EIYGALR---V----SEG-----GLNLSQG 129 (207)
T ss_pred HHCCHHHHHhhEEEEecCCcccC-ccHHHHhcccC------CCCHH----HHHHHhh---c----cCC-----CCcCCHH
Confidence 32 234567999999998776 59999986421 11221 1233333 1 222 2469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeC
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGG 885 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g 885 (1250)
|+||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. +|+|+|+++|++. ++ ..+|++++|++ |++...|
T Consensus 130 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~th~~~-~~-~~~d~v~~l~~-g~i~~~g 205 (207)
T cd03369 130 QRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEF-TNSTILTIAHRLR-TI-IDYDKILVMDA-GEVKEYD 205 (207)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999999985 4899999999975 34 45999999986 6887776
Q ss_pred C
Q 000860 886 K 886 (1250)
Q Consensus 886 ~ 886 (1250)
+
T Consensus 206 ~ 206 (207)
T cd03369 206 H 206 (207)
T ss_pred C
Confidence 5
No 365
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=327.77 Aligned_cols=191 Identities=26% Similarity=0.396 Sum_probs=161.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++||+|+..+++.+||+||+.|+...++...
T Consensus 31 ~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~ 107 (369)
T PRK11000 31 FVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKK 107 (369)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCCH
Confidence 47999999999999999999999865 999999999875432 34679999999999999999999999764332110
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. + .+.+++++++.+||.+..++.+++ |||||||||+||||
T Consensus 108 ~-----------~------------------------~~~~~~~~l~~lgL~~~~~~~~~~-----LSgGq~QRvaLAra 147 (369)
T PRK11000 108 E-----------E------------------------INQRVNQVAEVLQLAHLLDRKPKA-----LSGGQRQRVAIGRT 147 (369)
T ss_pred H-----------H------------------------HHHHHHHHHHHcCChhhhcCChhh-----CCHHHHHHHHHHHH
Confidence 0 0 011367789999998877777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++|||||||+|||+.++.++.+.|+++.++.+.|+|++. |+..++..++|+|++|++|+++..|+++++.
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vT-Hd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVT-HDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999998776578888764 5567888999999999999999999998874
No 366
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-33 Score=315.84 Aligned_cols=210 Identities=23% Similarity=0.341 Sum_probs=164.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. .++.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 19 ~i~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 85 (257)
T cd03288 19 EIKIHDLCVRYEN-----------NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVD--IFDGKIVIDGIDI 85 (257)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccC--CCCCeEEECCEEh
Confidence 5899999988742 12468999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHAL-------VGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-------v~~~~ 798 (1250)
.. ..+++.++|++|++.+++ .|++||+.... .... +.+.++++..++.+..+.. .+. .
T Consensus 86 ~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~------~~~~----~~~~~~l~~~~l~~~~~~~~~~l~~~~~~-~ 153 (257)
T cd03288 86 SKLPLHTLRSRLSIILQDPILFS-GSIRFNLDPEC------KCTD----DRLWEALEIAQLKNMVKSLPGGLDAVVTE-G 153 (257)
T ss_pred hhCCHHHHhhhEEEECCCCcccc-cHHHHhcCcCC------CCCH----HHHHHHHHHhCcHHHHhhcccccCcEecc-C
Confidence 43 245678999999998776 59999874211 1111 1233344444443322221 211 2
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.++++. ++.|||+++|++. ++. .+|++++|++
T Consensus 154 ~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~-~~dri~~l~~- 229 (257)
T cd03288 154 GENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAF-ADRTVVTIAHRVS-TIL-DADLVLVLSR- 229 (257)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhc-CCCEEEEEecChH-HHH-hCCEEEEEEC-
Confidence 34699999999999999999999999999999999999999999999874 5899999999986 344 5999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 230 G~i~~~g~~ 238 (257)
T cd03288 230 GILVECDTP 238 (257)
T ss_pred CEEEEeCCH
Confidence 789888875
No 367
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3.1e-33 Score=289.74 Aligned_cols=164 Identities=27% Similarity=0.381 Sum_probs=141.6
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 2 ~~~~~~~~~~~------------~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~---- 63 (166)
T cd03223 2 ELENLSLATPD------------GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWP--WGSGRIGMPEG---- 63 (166)
T ss_pred EEEEEEEEcCC------------CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCC----
Confidence 57888877631 2458999999999999999999999999999999999865 35799999873
Q ss_pred ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000860 731 STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRL 810 (1250)
Q Consensus 731 ~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~ 810 (1250)
+.++|++|++.++ ..||+||+.+. . ...||||||||+
T Consensus 64 ----~~i~~~~q~~~~~-~~tv~~nl~~~---------------------------------~-----~~~LS~G~~~rv 100 (166)
T cd03223 64 ----EDLLFLPQRPYLP-LGTLREQLIYP---------------------------------W-----DDVLSGGEQQRL 100 (166)
T ss_pred ----ceEEEECCCCccc-cccHHHHhhcc---------------------------------C-----CCCCCHHHHHHH
Confidence 5689999998764 67999998642 1 135999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcE
Q 000860 811 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGR 880 (1250)
Q Consensus 811 ~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~ 880 (1250)
+|||+|+.+|++++|||||+|||+.++..+.+.|+++ ++|+|+++|++. ....+|++++|+++|.
T Consensus 101 ~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~---~~tiiivsh~~~--~~~~~d~i~~l~~~~~ 165 (166)
T cd03223 101 AFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKEL---GITVISVGHRPS--LWKFHDRVLDLDGEGG 165 (166)
T ss_pred HHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHh---CCEEEEEeCChh--HHhhCCEEEEEcCCCC
Confidence 9999999999999999999999999999999999876 689999999974 4578999999998764
No 368
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=2.7e-33 Score=305.44 Aligned_cols=194 Identities=26% Similarity=0.387 Sum_probs=160.4
Q ss_pred EEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCC--CCCCHHHHHHHHH
Q 000860 683 GIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHS--PQVTIEESLWFSA 760 (1250)
Q Consensus 683 ~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~--~~ltv~e~l~~~~ 760 (1250)
+++++||+++|+||||||||||+++|+|..+ +.+|+|.+||.+.. ..++.++|++|++.++ ..+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPG--KGWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccch--HhhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4689999999999999999999999999866 35799999998753 2456799999998664 3479999998753
Q ss_pred hcCCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 000860 761 NLRLP-KEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 839 (1250)
Q Consensus 761 ~l~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~ 839 (1250)
..... ........+++++++++.+++.+..++.++ .||||||||++|||+|+.+|++++|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPVG-----ELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 001122334568899999999887777765 499999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 840 VMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 840 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
+.+.|++++++|+|||+++|++. ++.+.+|+++++ + |++++.|+.+
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999999877999999999985 577889999999 5 7888888864
No 369
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-33 Score=348.80 Aligned_cols=211 Identities=24% Similarity=0.388 Sum_probs=174.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. .++.+|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 313 ~I~~~~v~~~y~~-----------~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~--p~~G~i~~~g~~~ 379 (569)
T PRK10789 313 ELDVNIRQFTYPQ-----------TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFD--VSEGDIRFHDIPL 379 (569)
T ss_pred cEEEEEEEEECCC-----------CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEH
Confidence 5899999998742 13468999999999999999999999999999999999876 4589999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELD-------SLRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~v~~~~ 798 (1250)
.. ..+++.++||+|++.+++ .|++||+.++. + +.+++ .++++++..++. +-.|+.+|+.
T Consensus 380 ~~~~~~~~~~~i~~v~q~~~lf~-~ti~~Ni~~~~----~-~~~~~----~~~~~~~~~~l~~~i~~lp~gl~t~~~~~- 448 (569)
T PRK10789 380 TKLQLDSWRSRLAVVSQTPFLFS-DTVANNIALGR----P-DATQQ----EIEHVARLASVHDDILRLPQGYDTEVGER- 448 (569)
T ss_pred hhCCHHHHHhheEEEccCCeecc-ccHHHHHhcCC----C-CCCHH----HHHHHHHHcCCHHHHHhCcCcccceecCC-
Confidence 43 456788999999998886 59999997642 1 22333 344555555543 3346777664
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||||+++|+|++||||||+||+.++..+++.|+++. +|+|+|+++|+++ ....+|++++|++
T Consensus 449 g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tii~itH~~~--~~~~~d~i~~l~~- 524 (569)
T PRK10789 449 GVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG-EGRTVIISAHRLS--ALTEASEILVMQH- 524 (569)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchh--HHHcCCEEEEEeC-
Confidence 34699999999999999999999999999999999999999999999875 5899999999984 5678999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 525 G~i~~~g~~ 533 (569)
T PRK10789 525 GHIAQRGNH 533 (569)
T ss_pred CEEEEecCH
Confidence 799999885
No 370
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.3e-33 Score=348.96 Aligned_cols=200 Identities=31% Similarity=0.482 Sum_probs=167.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+. .++++|+|+|++++|||++||+||||||||||+|+|+|..+ +.+|+|.+||.++
T Consensus 320 ~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~I~~~g~~i 386 (529)
T TIGR02857 320 SLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVD--PTEGSIAVNGVPL 386 (529)
T ss_pred eEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeh
Confidence 5899999999853 12468999999999999999999999999999999999876 3579999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+++.++||+|++.+++ .|++||+.++. + ..++ +.++++++..++.+ -.||.+|+.+
T Consensus 387 ~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~~----~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g 456 (529)
T TIGR02857 387 ADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR----P-DASD----AEIRRALERAGLDEFVAALPQGLDTLIGEGG 456 (529)
T ss_pred hhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC----C-CCCH----HHHHHHHHHcCcHHHHHhCcccccchhcccc
Confidence 53 457788999999998885 59999998752 1 2233 33566667666654 3467777633
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeee
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLM 875 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l 875 (1250)
..||||||||++|||||+++|++++||||||+||+.+++.+++.|+++. +++|+|+++|+++ ..+.+|++++|
T Consensus 457 -~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~i~~l 529 (529)
T TIGR02857 457 -AGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLA--LAERADRIVVL 529 (529)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHH--HHHhCCEEEeC
Confidence 4699999999999999999999999999999999999999999999875 5899999999974 56789999875
No 371
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-34 Score=295.90 Aligned_cols=186 Identities=28% Similarity=0.439 Sum_probs=162.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+|||-|+||||||||+|+|+|+.+|+ +|.|.+||.-+.+. .-+|.+|||+|+-.+||++||+.||.|+..
T Consensus 26 vTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~ 102 (352)
T COG4148 26 ITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMW 102 (352)
T ss_pred eEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhc
Confidence 58999999999999999999999975 99999999876332 136889999999999999999999999753
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
... ....+++.+.||++|..+..... ||||||||
T Consensus 103 ~~~-----------------------------------------~~~fd~iv~lLGI~hLL~R~P~~-----LSGGEkQR 136 (352)
T COG4148 103 KSM-----------------------------------------RAQFDQLVALLGIEHLLDRYPGT-----LSGGEKQR 136 (352)
T ss_pred ccc-----------------------------------------hHhHHHHHHHhCcHHHHhhCCCc-----cCcchhhH
Confidence 110 00146788999999999887765 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|+|||++.|++|++|||.|.||-.-..+++-.|+++.++.+.-++-+ +|-..|+.+++|+|++|++|++...|+.++
T Consensus 137 VAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYV-SHS~~Ev~RLAd~vV~le~GkV~A~g~~e~ 215 (352)
T COG4148 137 VAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYV-SHSLDEVLRLADRVVVLENGKVKASGPLEE 215 (352)
T ss_pred HHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEE-ecCHHHHHhhhheEEEecCCeEEecCcHHH
Confidence 9999999999999999999999999999999999999998877777665 566899999999999999999999999998
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+.+
T Consensus 216 v~~ 218 (352)
T COG4148 216 VWG 218 (352)
T ss_pred Hhc
Confidence 743
No 372
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.4e-33 Score=342.82 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=173.1
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+ ++++|+|+|+++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~--p~~G~i~~~~~~~ 67 (490)
T PRK10938 3 SLQISQGTFRLS-------------DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELP--LLSGERQSQFSHI 67 (490)
T ss_pred eEEEEeEEEEcC-------------CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCceEEECCccc
Confidence 478999998873 2358999999999999999999999999999999999865 3579999998764
Q ss_pred Cc---ccccceEEEEcCCCCC--C------CCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000860 729 EQ---STFARISGYVEQEDVH--S------PQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSP 797 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~--~------~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~ 797 (1250)
.. ...++.++|++|++.. + ..+||+|++.+. .+.+++++++++.+||.+..++.++.
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~~~~~~~~~- 135 (490)
T PRK10938 68 TRLSFEQLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE-----------VKDPARCEQLAQQFGITALLDRRFKY- 135 (490)
T ss_pred ccCCHHHHHHHhceeccCcchhhcccchhhccccHHHhcccc-----------hhHHHHHHHHHHHcCCHhhhhCCccc-
Confidence 32 2234568999998642 1 146888876431 12345688999999999888887765
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 798 GSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 798 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|++
T Consensus 136 ----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~-~~~~~~d~v~~l~~ 210 (490)
T PRK10938 136 ----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFD-EIPDFVQFAGVLAD 210 (490)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHH-HHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999877999999999985 57788999999985
Q ss_pred CcEEEEeCCC
Q 000860 878 GGRVIYGGKL 887 (1250)
Q Consensus 878 gg~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 211 -G~i~~~~~~ 219 (490)
T PRK10938 211 -CTLAETGER 219 (490)
T ss_pred -CEEEEeCCH
Confidence 788888875
No 373
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=4e-33 Score=346.50 Aligned_cols=210 Identities=27% Similarity=0.336 Sum_probs=171.5
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+. ++++|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 334 ~i~~~~v~~~y~~------------~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~--~~~G~i~~~g~~~ 399 (585)
T TIGR01192 334 AVEFRHITFEFAN------------SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYD--PTVGQILIDGIDI 399 (585)
T ss_pred eEEEEEEEEECCC------------CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCC--CCCCEEEECCEEh
Confidence 5899999998742 2358999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCC-------cccccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVEL-------DSLRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l-------~~~~~~~v~~~~ 798 (1250)
.. ..+++.++||+|++.+++ .|++||+.++. + +.++++. .++++..++ .+..|+.+|+.
T Consensus 400 ~~~~~~~~~~~i~~v~q~~~lf~-~ti~~Ni~~~~----~-~~~~~~~----~~a~~~~~~~~~i~~l~~g~~t~~~~~- 468 (585)
T TIGR01192 400 NTVTRESLRKSIATVFQDAGLFN-RSIRENIRLGR----E-GATDEEV----YEAAKAAAAHDFILKRSNGYDTLVGER- 468 (585)
T ss_pred hhCCHHHHHhheEEEccCCccCc-ccHHHHHhcCC----C-CCCHHHH----HHHHHHhCcHHHHHhccccccchhcCC-
Confidence 43 456788999999998875 69999998752 1 2334333 233333333 23345666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||+|+++|++++|||||||||+.++..+.+.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 469 ~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~-~~~tvI~isH~~~--~~~~~d~i~~l~~- 544 (585)
T TIGR01192 469 GNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR-KNRTTFIIAHRLS--TVRNADLVLFLDQ- 544 (585)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh-CCCEEEEEEcChH--HHHcCCEEEEEEC-
Confidence 34699999999999999999999999999999999999999999999874 5899999999984 4577999999985
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 545 G~i~~~g~~ 553 (585)
T TIGR01192 545 GRLIEKGSF 553 (585)
T ss_pred CEEEEECCH
Confidence 788888874
No 374
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.1e-33 Score=313.49 Aligned_cols=216 Identities=24% Similarity=0.336 Sum_probs=190.2
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++++++.++ ...+++|||++|++||+.||+|.||||||||+++|.|... +.+|+|.+||++.
T Consensus 4 ~l~~~~itK~f~-------------~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~--P~~GeI~v~G~~v 68 (501)
T COG3845 4 ALEMRGITKRFP-------------GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQ--PDSGEIRVDGKEV 68 (501)
T ss_pred eEEEeccEEEcC-------------CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCccc--CCcceEEECCEEe
Confidence 578899998874 3568999999999999999999999999999999999877 4689999999985
Q ss_pred Cc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.- ...+.-||+|.|+..+.|++||.||+..+..-......+.++.+++++++.+..||.--.|.++++ ||-
T Consensus 69 ~~~sP~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~d-----LsV 143 (501)
T COG3845 69 RIKSPRDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVAD-----LSV 143 (501)
T ss_pred ccCCHHHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceeec-----CCc
Confidence 42 234567999999999999999999999886432222345677788899999999999888999976 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
||||||.|-++|.++|++|+|||||+-|-|....++.++|++++++|+|||++||... |+.+.+||+.||.+ |+++-.
T Consensus 144 G~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt 221 (501)
T COG3845 144 GEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGT 221 (501)
T ss_pred chhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEee
Confidence 9999999999999999999999999999999999999999999999999999999985 79999999999986 676655
Q ss_pred CC
Q 000860 885 GK 886 (1250)
Q Consensus 885 g~ 886 (1250)
-+
T Consensus 222 ~~ 223 (501)
T COG3845 222 VD 223 (501)
T ss_pred ec
Confidence 44
No 375
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-33 Score=326.07 Aligned_cols=186 Identities=32% Similarity=0.426 Sum_probs=154.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
.+||+|+||||||||+++|+|+.+|+ +|+|.+||.+.++. .++++++||+|++.+|+ .|+||||.++...
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~~~--- 421 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLARPD--- 421 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccCCc---
Confidence 38999999999999999999999865 99999999987654 57899999999977665 6999999886311
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCC------ccccccccCCCccccCccccc
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGL------DLCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~~t~vg~~~~~~LSGGqk 151 (1250)
.+. . .+.++++..|| ++..||.+|++ +++|||||+
T Consensus 422 -~s~----e---------------------------------~i~~al~~a~l~~~v~~p~GLdt~ige~-G~~LSgGQ~ 462 (559)
T COG4988 422 -ASD----E---------------------------------EIIAALDQAGLLEFVPKPDGLDTVIGEG-GAGLSGGQA 462 (559)
T ss_pred -CCH----H---------------------------------HHHHHHHHhcHHHhhcCCCcccchhccC-CCCCCHHHH
Confidence 110 0 12223333333 45779999975 567999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||++||||+++++++++||||++||.+++..|.+.|.++++ ++|++++.| +.+....+|+|++|++|++++.|.+
T Consensus 463 QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itH--rl~~~~~~D~I~vld~G~l~~~g~~ 538 (559)
T COG4988 463 QRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITH--RLEDAADADRIVVLDNGRLVEQGTH 538 (559)
T ss_pred HHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEc--ChHHHhcCCEEEEecCCceeccCCH
Confidence 999999999999999999999999999999999999999986 588888755 4567778999999999999999999
Q ss_pred hhHHH
Q 000860 232 AEVLE 236 (1250)
Q Consensus 232 ~~~~~ 236 (1250)
+++.+
T Consensus 539 ~~L~~ 543 (559)
T COG4988 539 EELSE 543 (559)
T ss_pred HHHhh
Confidence 99854
No 376
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-33 Score=323.05 Aligned_cols=191 Identities=25% Similarity=0.361 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------ccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------VQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 33 i~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~ 109 (343)
T PRK11153 33 IFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLEL 109 (343)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999865 999999999875421 256799999999999999999999987543
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.... + .+.+++++++.+||.+..++.+++ |||||||||
T Consensus 110 ~~~~~~-----------~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGq~qRv 149 (343)
T PRK11153 110 AGTPKA-----------E------------------------IKARVTELLELVGLSDKADRYPAQ-----LSGGQKQRV 149 (343)
T ss_pred cCCCHH-----------H------------------------HHHHHHHHHHHcCCchhhhCChhh-----CCHHHHHHH
Confidence 321100 0 011256789999998877777654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.++||++++|++|++++.|+++++
T Consensus 150 ~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvt-H~~~~i~~~~d~v~~l~~G~i~~~g~~~~~ 228 (343)
T PRK11153 150 AIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLIT-HEMDVVKRICDRVAVIDAGRLVEQGTVSEV 228 (343)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999999999999765578888775 556778889999999999999999998887
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 229 ~ 229 (343)
T PRK11153 229 F 229 (343)
T ss_pred H
Confidence 4
No 377
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-33 Score=304.54 Aligned_cols=190 Identities=28% Similarity=0.393 Sum_probs=157.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc--ccccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE--FQVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~--~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.. ...++.++|++|++.+++.+||+||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 104 (220)
T cd03265 28 IFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVP 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999864 9999999987643 133567999999998999999999998865432210
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + .+..++++++.+||++..++.+++ ||||||||++||+
T Consensus 105 ~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr~~la~ 144 (220)
T cd03265 105 GA-----------E------------------------RRERIDELLDFVGLLEAADRLVKT-----YSGGMRRRLEIAR 144 (220)
T ss_pred HH-----------H------------------------HHHHHHHHHHHcCCHHHhhCChhh-----CCHHHHHHHHHHH
Confidence 00 0 011256789999998877877765 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
|++.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++ +|+.+++.+.+|++++|++|++++.|+++++
T Consensus 145 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~-tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 145 SLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLT-THYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999999999999876557787776 4557788889999999999999999887653
No 378
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=5.5e-32 Score=338.54 Aligned_cols=217 Identities=23% Similarity=0.345 Sum_probs=184.8
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++.. .+.+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 4 ~l~~~nl~~~y~~~---------~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~i 72 (648)
T PRK10535 4 LLELKDIRRSYPSG---------EEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDK--PTSGTYRVAGQDV 72 (648)
T ss_pred EEEEeeEEEEeCCC---------CCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEc
Confidence 58999999987421 113469999999999999999999999999999999999876 3589999999886
Q ss_pred Ccc---c----ccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000860 729 EQS---T----FARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFG 801 (1250)
Q Consensus 729 ~~~---~----~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~ 801 (1250)
... . .++.++|++|++.+++.+|+.||+.+..... ....++.++++.++++.+||.+..|+.++.
T Consensus 73 ~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~----- 144 (648)
T PRK10535 73 ATLDADALAQLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYA---GLERKQRLLRAQELLQRLGLEDRVEYQPSQ----- 144 (648)
T ss_pred CcCCHHHHHHHHhccEEEEeCCcccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhhhcCCccc-----
Confidence 531 1 1467999999999999999999998765322 223455567789999999999887777754
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEE
Q 000860 802 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRV 881 (1250)
Q Consensus 802 lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~ 881 (1250)
|||||+||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|+|+++|++. ..+.+|++++|.+ |++
T Consensus 145 LS~Gq~qrv~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~--~~~~~d~i~~l~~-G~i 221 (648)
T PRK10535 145 LSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQ--VAAQAERVIEIRD-GEI 221 (648)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHH--HHHhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999998777999999999974 4567999999985 789
Q ss_pred EEeCCC
Q 000860 882 IYGGKL 887 (1250)
Q Consensus 882 ~~~g~~ 887 (1250)
++.|+.
T Consensus 222 ~~~g~~ 227 (648)
T PRK10535 222 VRNPPA 227 (648)
T ss_pred EeecCc
Confidence 988876
No 379
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.6e-33 Score=350.49 Aligned_cols=212 Identities=26% Similarity=0.401 Sum_probs=174.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.|+.. .++.+|+|+|++++|||.++|+|+||||||||+|+|+|..+ +.+|+|.+||.++
T Consensus 337 ~i~~~~v~f~y~~~----------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~--p~~G~I~i~g~~i 404 (576)
T TIGR02204 337 EIEFEQVNFAYPAR----------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYD--PQSGRILLDGVDL 404 (576)
T ss_pred eEEEEEEEEECCCC----------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCEEEECCEEH
Confidence 58999999988531 12569999999999999999999999999999999999876 3579999999886
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDS-------LRHALVGSPG 798 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~v~~~~ 798 (1250)
++ ..+++.++|+||++.+++ .|++||+.++. | +.++ +.++++++..++.+ -.|+.+|+.
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~-~Ti~~Ni~~~~----~-~~~~----~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~- 473 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFA-ASVMENIRYGR----P-DATD----EEVEAAARAAHAHEFISALPEGYDTYLGER- 473 (576)
T ss_pred HhcCHHHHHHhceEEccCCcccc-ccHHHHHhcCC----C-CCCH----HHHHHHHHHcCcHHHHHhCCCCCCceeCCC-
Confidence 53 456788999999998875 69999997642 1 1232 33556666666543 235566653
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
...||||||||++|||+++++|++++||||||+||+.+++.+++.|+++. +++|+|++||+++ ....+|++++|++
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~-~~~t~IiitH~~~--~~~~~d~vi~l~~- 549 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM-KGRTTLIIAHRLA--TVLKADRIVVMDQ- 549 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 35699999999999999999999999999999999999999999999985 5899999999974 5678999999986
Q ss_pred cEEEEeCCC
Q 000860 879 GRVIYGGKL 887 (1250)
Q Consensus 879 g~~~~~g~~ 887 (1250)
|+++..|+.
T Consensus 550 g~~~~~g~~ 558 (576)
T TIGR02204 550 GRIVAQGTH 558 (576)
T ss_pred CEEEeeecH
Confidence 788888875
No 380
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=7.1e-33 Score=286.12 Aligned_cols=158 Identities=28% Similarity=0.423 Sum_probs=137.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.++ ++++|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~-------------~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 65 (163)
T cd03216 1 LELRGITKRFG-------------GVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYK--PDSGEILVDGKEVS 65 (163)
T ss_pred CEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEECC
Confidence 36788888773 2358999999999999999999999999999999999876 35799999998764
Q ss_pred cc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 730 QS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 730 ~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
.. ..++.++|++| ||||
T Consensus 66 ~~~~~~~~~~~i~~~~q-----------------------------------------------------------LS~G 86 (163)
T cd03216 66 FASPRDARRAGIAMVYQ-----------------------------------------------------------LSVG 86 (163)
T ss_pred cCCHHHHHhcCeEEEEe-----------------------------------------------------------cCHH
Confidence 31 23456788887 8999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEE
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIY 883 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~ 883 (1250)
||||++|||+|+.+|++++|||||+|||..++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 87 ~~qrl~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~~~~l~~-g~i~~ 162 (163)
T cd03216 87 ERQMVEIARALARNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLD-EVFEIADRVTVLRD-GRVVG 162 (163)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEe
Confidence 999999999999999999999999999999999999999999777999999999974 46778999999986 67654
No 381
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=323.72 Aligned_cols=191 Identities=21% Similarity=0.322 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-------ccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-------VQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|+..+++++||+||+.++..
T Consensus 56 i~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~ 132 (400)
T PRK10070 56 IFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGME 132 (400)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999865 999999999875432 13579999999999999999999998765
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.++.... + ...+++++++.+||.+..++.+.+ ||||||||
T Consensus 133 ~~~~~~~-----------~------------------------~~~~~~e~L~~~gL~~~~~~~~~~-----LSgGq~QR 172 (400)
T PRK10070 133 LAGINAE-----------E------------------------RREKALDALRQVGLENYAHSYPDE-----LSGGMRQR 172 (400)
T ss_pred hcCCCHH-----------H------------------------HHHHHHHHHHHcCCChhhhcCccc-----CCHHHHHH
Confidence 4321100 0 001256789999998877776654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|++|||||||+|||+.++.++.+.|+++.++.++|+|++. |+.+++.+++|+|++|++|+++..|++++
T Consensus 173 v~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivT-Hd~~~~~~~~Dri~vL~~G~i~~~g~~~~ 251 (400)
T PRK10070 173 VGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFIS-HDLDEAMRIGDRIAIMQNGEVVQVGTPDE 251 (400)
T ss_pred HHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEE-CCHHHHHHhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999998765678888774 55778889999999999999999999888
Q ss_pred HH
Q 000860 234 VL 235 (1250)
Q Consensus 234 ~~ 235 (1250)
+.
T Consensus 252 l~ 253 (400)
T PRK10070 252 IL 253 (400)
T ss_pred HH
Confidence 64
No 382
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.6e-33 Score=298.72 Aligned_cols=195 Identities=23% Similarity=0.402 Sum_probs=149.6
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|+++.+.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|
T Consensus 1 l~~~~l~~~~~~~~--------~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~--~~~G~i~~~g---- 66 (204)
T cd03250 1 ISVEDASFTWDSGE--------QETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELE--KLSGSVSVPG---- 66 (204)
T ss_pred CEEeEEEEecCCCC--------ccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCCeEEEcC----
Confidence 36788888764210 001369999999999999999999999999999999999866 4589999998
Q ss_pred cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccc-------ccccCCCCCcC
Q 000860 730 QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRH-------ALVGSPGSFGL 802 (1250)
Q Consensus 730 ~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~-------~~v~~~~~~~l 802 (1250)
.++|++|++.++ ..|++||+.+... ...+ ...++.+.+++.+..+ +.... ....|
T Consensus 67 ------~i~~~~q~~~l~-~~t~~enl~~~~~------~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l 128 (204)
T cd03250 67 ------SIAYVSQEPWIQ-NGTIRENILFGKP------FDEE----RYEKVIKACALEPDLEILPDGDLTEIGE-KGINL 128 (204)
T ss_pred ------EEEEEecCchhc-cCcHHHHhccCCC------cCHH----HHHHHHHHcCcHHHHHhccCcccceecC-CCCcC
Confidence 489999999887 5699999977421 1111 1233344444432221 11221 23469
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHH-HHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 803 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR-AVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 803 SgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~-~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
|||||||++|||+|+.+|++++|||||+|||+.+...+.+ +++++.++|+|||+++|++. .+.. +|++++|.+|
T Consensus 129 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~-~~~~-~d~i~~l~~G 203 (204)
T cd03250 129 SGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQ-LLPH-ADQIVVLDNG 203 (204)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHH-HHhh-CCEEEEEeCC
Confidence 9999999999999999999999999999999999999988 56766666899999999975 3444 9999999863
No 383
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-33 Score=302.10 Aligned_cols=185 Identities=25% Similarity=0.396 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-cccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....+...
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~ 104 (213)
T cd03259 28 FLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGVPK 104 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCCCH
Confidence 47999999999999999999999864 99999999987532 234679999999888989999999988643221100
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.. .+.+++++++.+||.+..++.+++ ||||||||++||||
T Consensus 105 -----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrl~la~a 144 (213)
T cd03259 105 -----------AE------------------------IRARVRELLELVGLEGLLNRYPHE-----LSGGQQQRVALARA 144 (213)
T ss_pred -----------HH------------------------HHHHHHHHHHHcCChhhhhcChhh-----CCHHHHHHHHHHHH
Confidence 00 001256788999998877777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++. |+..++.+.+|++++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s-H~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVT-HDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-cCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998765577887764 5567788899999999999998765
No 384
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-33 Score=318.93 Aligned_cols=191 Identities=26% Similarity=0.376 Sum_probs=156.1
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+||+|+|||||||++|+|.++.+ . +|+|.+||+++++. ..|+.+|||||+..+|. .||.+||.||..- .
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn~s--a- 452 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGNPS--A- 452 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCCCC--c-
Confidence 79999999999999999999997 3 99999999998654 46889999999866665 6999999997321 1
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + .....+++.. ..++ ...++++++|.||+++.. |||||||||++||
T Consensus 453 -s~-e--eV~e~~k~a~-------------------------~hd~--i~~l~~GY~T~VGerG~~-LSGGekQrvslaR 500 (591)
T KOG0057|consen 453 -SD-E--EVVEACKRAG-------------------------LHDV--ISRLPDGYQTLVGERGLM-LSGGEKQRVSLAR 500 (591)
T ss_pred -CH-H--HHHHHHHHcC-------------------------cHHH--HHhccccchhhHhhcccc-cccchHHHHHHHH
Confidence 11 1 1111111110 1111 235788999999997765 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|++.+|+|+++|||||+||.+++.++++.+.+.. .++|+|++.|. ......||+|++|++|++.+.|+++|+..
T Consensus 501 a~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~IvH~--l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 501 AFLKDAPILLLDEATSALDSETEREILDMIMDVM--SGRTVIMIVHR--LDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HHhcCCCeEEecCcccccchhhHHHHHHHHHHhc--CCCeEEEEEec--chhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 9999999999999999999999999999999853 48999998765 47788999999999999999999999875
No 385
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=8.1e-33 Score=342.12 Aligned_cols=208 Identities=21% Similarity=0.287 Sum_probs=166.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++|+. ++++|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 322 ~i~~~~v~f~y~~------------~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--~~~G~i~~~g~~~ 387 (547)
T PRK10522 322 TLELRNVTFAYQD------------NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ--PQSGEILLDGKPV 387 (547)
T ss_pred eEEEEEEEEEeCC------------CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEC
Confidence 6899999999852 2358999999999999999999999999999999999876 4589999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000860 729 EQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTE 805 (1250)
Q Consensus 729 ~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgG 805 (1250)
.. ..+++.++||+|++.+++ .|++|| . .. ..++.++++++.+++....+...+...+.+||||
T Consensus 388 ~~~~~~~~~~~i~~v~q~~~lf~-~ti~~n---~------~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgG 453 (547)
T PRK10522 388 TAEQPEDYRKLFSAVFTDFHLFD-QLLGPE---G------KP----ANPALVEKWLERLKMAHKLELEDGRISNLKLSKG 453 (547)
T ss_pred CCCCHHHHhhheEEEecChhHHH-Hhhccc---c------Cc----hHHHHHHHHHHHcCCchhhhccccCCCCCCCCHH
Confidence 53 356788999999998775 477775 0 11 2234567888888887644321111113579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 806 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 806 erqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
||||++||||++++|++|+||||||+||+.++..+.+.+.+..+ .|+|+|+++|++ +....+|++++|++|+.+.+.
T Consensus 454 q~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~--~~~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 454 QKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDD--HYFIHADRLLEMRNGQLSELT 531 (547)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEech--HHHHhCCEEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999876543 589999999997 467899999999874444443
Q ss_pred CC
Q 000860 885 GK 886 (1250)
Q Consensus 885 g~ 886 (1250)
|.
T Consensus 532 ~~ 533 (547)
T PRK10522 532 GE 533 (547)
T ss_pred CC
Confidence 43
No 386
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.8e-31 Score=342.29 Aligned_cols=224 Identities=25% Similarity=0.371 Sum_probs=197.3
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.+..+|+++.++.. ++ +++++|+.|++||+.|++|+|||||||++|+|.|..+ +.+|++.++|.++
T Consensus 564 ~~~~~~L~k~y~~~-----------~~-Av~~ls~~V~~gecfgLLG~NGAGKtT~f~mltG~~~--~t~G~a~i~g~~i 629 (885)
T KOG0059|consen 564 ALVLNNLSKVYGGK-----------DG-AVRGLSFAVPPGECFGLLGVNGAGKTTTFKMLTGETK--PTSGEALIKGHDI 629 (885)
T ss_pred eEEEcceeeeecch-----------hh-hhcceEEEecCCceEEEecCCCCCchhhHHHHhCCcc--CCcceEEEecCcc
Confidence 46677777766431 12 8999999999999999999999999999999999876 4589999999987
Q ss_pred Cc----ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000860 729 EQ----STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLST 804 (1250)
Q Consensus 729 ~~----~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSg 804 (1250)
.. ...++.+|||||+|.+++.+|.||++.+.++++ +.+..+.++.++.+++.++|.+.+++.++. +||
T Consensus 630 ~~~~~~~~~~~~iGyCPQ~d~l~~~lT~rEhL~~~arlr---G~~~~di~~~v~~ll~~~~L~~~~~~~~~~-----ySg 701 (885)
T KOG0059|consen 630 TVSTDFQQVRKQLGYCPQFDALWEELTGREHLEFYARLR---GLPRSDIGSAIEKLLRLVGLGPYANKQVRT-----YSG 701 (885)
T ss_pred ccccchhhhhhhcccCCchhhhhhhccHHHHHHHHHHHc---CCChhHHHHHHHHHHHHcCChhhhccchhh-----CCC
Confidence 54 236778999999999999999999999999987 456667777899999999999999999876 999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEe
Q 000860 805 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYG 884 (1250)
Q Consensus 805 Gerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~ 884 (1250)
|+|||+++|.||+.+|++++|||||+|+||.+++.++++++++.+.|+.||.|+|..+ |.-.+|||+.+|.+ |+..--
T Consensus 702 G~kRkLs~aialig~p~vi~LDEPstGmDP~arr~lW~ii~~~~k~g~aiiLTSHsMe-E~EaLCtR~aImv~-G~l~ci 779 (885)
T KOG0059|consen 702 GNKRRLSFAIALIGDPSVILLDEPSTGLDPKARRHLWDIIARLRKNGKAIILTSHSME-EAEALCTRTAIMVI-GQLRCI 779 (885)
T ss_pred cchhhHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHHhhhhheeec-CeeEEe
Confidence 9999999999999999999999999999999999999999999888889999999874 67789999999986 788888
Q ss_pred CCCCccchhHHHHhhh
Q 000860 885 GKLGVHSQIMIDYFQG 900 (1250)
Q Consensus 885 g~~~~~~~~~~~yf~~ 900 (1250)
|++ +++...|.+
T Consensus 780 Gs~----q~LKsrfG~ 791 (885)
T KOG0059|consen 780 GSP----QELKSRYGS 791 (885)
T ss_pred cCh----HHHHhhcCC
Confidence 886 677777754
No 387
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-33 Score=309.99 Aligned_cols=191 Identities=24% Similarity=0.352 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-------ccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-------VQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 52 ~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 128 (269)
T cd03294 52 IFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999864 999999998875321 13579999999989989999999988654
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
..+... .+ ...+++++++.+||.+..++.+++ ||||||||
T Consensus 129 ~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Gq~qr 168 (269)
T cd03294 129 VQGVPR-----------AE------------------------REERAAEALELVGLEGWEHKYPDE-----LSGGMQQR 168 (269)
T ss_pred hcCCCH-----------HH------------------------HHHHHHHHHHHcCCHhHhhCCccc-----CCHHHHHH
Confidence 321100 00 001256788999998877877765 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.|+|+|++. |+..++.+.+|++++|++|++++.|++++
T Consensus 169 v~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~t-H~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 247 (269)
T cd03294 169 VGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFIT-HDLDEALRLGDRIAIMKDGRLVQVGTPEE 247 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998765578888775 45667788999999999999999999887
Q ss_pred HH
Q 000860 234 VL 235 (1250)
Q Consensus 234 ~~ 235 (1250)
+.
T Consensus 248 ~~ 249 (269)
T cd03294 248 IL 249 (269)
T ss_pred HH
Confidence 64
No 388
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-33 Score=289.02 Aligned_cols=166 Identities=33% Similarity=0.533 Sum_probs=142.4
Q ss_pred EEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc
Q 000860 651 TFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 730 (1250)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~ 730 (1250)
+++|+++.++. ++.++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~--~~~G~i~~~g~~~~~ 68 (171)
T cd03228 2 EFKNVSFSYPG-----------RPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYD--PTSGEILIDGVDLRD 68 (171)
T ss_pred EEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCCEEEECCEEhhh
Confidence 57788877632 11358999999999999999999999999999999999866 357999999987542
Q ss_pred ---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000860 731 ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQR 807 (1250)
Q Consensus 731 ---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGer 807 (1250)
..+++.++|++|++.+++ .|+.||+ ||||||
T Consensus 69 ~~~~~~~~~i~~~~~~~~~~~-~t~~e~l---------------------------------------------LS~G~~ 102 (171)
T cd03228 69 LDLESLRKNIAYVPQDPFLFS-GTIRENI---------------------------------------------LSGGQR 102 (171)
T ss_pred cCHHHHHhhEEEEcCCchhcc-chHHHHh---------------------------------------------hCHHHH
Confidence 234567999999987765 5888765 899999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 808 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 808 qr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.. +|++++|++|
T Consensus 103 ~rl~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~-~d~~~~l~~g 170 (171)
T cd03228 103 QRIAIARALLRDPPILILDEATSALDPETEALILEALRALAK-GKTVIVIAHRLS-TIRD-ADRIIVLDDG 170 (171)
T ss_pred HHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HHHh-CCEEEEEcCC
Confidence 999999999999999999999999999999999999999854 799999999985 4544 9999999863
No 389
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-33 Score=305.67 Aligned_cols=195 Identities=26% Similarity=0.403 Sum_probs=157.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....+...
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~ 106 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSE 106 (239)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccc
Confidence 47999999999999999999999864 999999999875332 24579999999888888999999988643221100
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.. ...+ ....++++++.+||.+..++.+++ |||||||||+||||
T Consensus 107 ~~-------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~la~a 150 (239)
T cd03296 107 RP-------PEAE------------------------IRAKVHELLKLVQLDWLADRYPAQ-----LSGGQRQRVALARA 150 (239)
T ss_pred cC-------CHHH------------------------HHHHHHHHHHHcCChhhhhcChhh-----CCHHHHHHHHHHHH
Confidence 00 0000 001256788999998777776654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++|+|||||+|||+.++..+.+.|++++++.++|+|++.| +..++.+.+|++++|++|++++.|+++++.
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH-~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 151 LAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTH-DQEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 999999999999999999999999999999987655788887754 467778899999999999999999988763
No 390
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=311.50 Aligned_cols=192 Identities=26% Similarity=0.405 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-----cccceEEeecccc-ccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-----QVQRASAYIGQTD-NHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~-~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.+|||+|++ ..+...||+||+.|+...
T Consensus 35 ~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 111 (287)
T PRK13637 35 FVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPIN 111 (287)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHH
Confidence 47999999999999999999999865 99999999988542 3457899999985 244457999999986533
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc--cccccccCCCccccCccccch
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD--LCSDTVVGSEMLRGVSGGQKK 152 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~vg~~~~~~LSGGqkq 152 (1250)
.+... .+ ...+++++++.+||. +..|+.+. .|||||||
T Consensus 112 ~~~~~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~~-----~LSgGq~q 151 (287)
T PRK13637 112 LGLSE-----------EE------------------------IENRVKRAMNIVGLDYEDYKDKSPF-----ELSGGQKR 151 (287)
T ss_pred CCCCH-----------HH------------------------HHHHHHHHHHHcCCCchhhccCCcc-----cCCHHHHH
Confidence 21110 00 011366789999996 55666654 49999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChh
Q 000860 153 RVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRA 232 (1250)
Q Consensus 153 Rv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~ 232 (1250)
|++|||||+.+|++|||||||+|||+.++.++.+.|++++++.++|+|+++ |+..++.++||+|++|++|++++.|+++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vt-Hd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVS-HSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999999765578888775 4567778899999999999999999998
Q ss_pred hHHH
Q 000860 233 EVLE 236 (1250)
Q Consensus 233 ~~~~ 236 (1250)
++.+
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8743
No 391
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.8e-33 Score=315.64 Aligned_cols=191 Identities=29% Similarity=0.364 Sum_probs=159.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 32 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 108 (303)
T TIGR01288 32 CFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMS 108 (303)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999865 99999999887432 24567999999998899999999998654322110
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + ...+++++++.+||++..++.+++ ||||||||++|||
T Consensus 109 ~~-----------~------------------------~~~~~~~ll~~~~l~~~~~~~~~~-----LSgG~~qrv~la~ 148 (303)
T TIGR01288 109 TR-----------E------------------------IEAVIPSLLEFARLESKADVRVAL-----LSGGMKRRLTLAR 148 (303)
T ss_pred HH-----------H------------------------HHHHHHHHHHHCCChhHhcCchhh-----CCHHHHHHHHHHH
Confidence 00 0 001245678899999888888765 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+.+|++|||||||+|||+.++..+++.|+++++ .|+|+|++ +|+..++.++||++++|++|++++.|+++++.+
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~-sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLT-THFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEE-CCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999875 47888876 455778888999999999999999999988754
No 392
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.5e-32 Score=299.20 Aligned_cols=187 Identities=28% Similarity=0.385 Sum_probs=147.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCC
Q 000860 675 LQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQEDVHS 747 (1250)
Q Consensus 675 ~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~yv~q~~~~~ 747 (1250)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.++
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (218)
T cd03290 14 LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQ--TLEGKVHWSNKNESEPSFEATRSRNRYSVAYAAQKPWLL 91 (218)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCcccccccccccchhhcceEEEEcCCCccc
Confidence 468999999999999999999999999999999999875 357999999986532 12346799999998877
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCcCCHHHHHHHHHHHHHhhCC
Q 000860 748 PQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHA-------LVGSPGSFGLSTEQRKRLTIAVELVANP 820 (1250)
Q Consensus 748 ~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~v~~~~~~~lSgGerqr~~ia~~l~~~p 820 (1250)
..|++||+.+... ... +...++++.+++.+..+. ..+. ....||||||||++|||+|+.+|
T Consensus 92 -~~t~~~nl~~~~~------~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 92 -NATVEENITFGSP------FNK----QRYKAVTDACSLQPDIDLLPFGDQTEIGE-RGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred -cccHHHHHhhcCc------CCH----HHHHHHHHHhCcHHHHHhCcCccccCccc-CCCcCCHHHHHHHHHHHHHhhCC
Confidence 5799999976421 111 123455566666443221 1111 23469999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHH--HHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeec
Q 000860 821 SIIFMDEPTSGLDARAAAIVMR--AVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKR 877 (1250)
Q Consensus 821 ~il~lDEPTsgLD~~~~~~i~~--~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~ 877 (1250)
++++|||||+|||+.+...+++ .++.+.+.|+|+|+++|+++ .+ ..+|++++|.+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~ 216 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQ-YL-PHADWIIAMKD 216 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChH-HH-hhCCEEEEecC
Confidence 9999999999999999999998 66666666899999999985 34 57999999975
No 393
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=1.1e-32 Score=316.15 Aligned_cols=184 Identities=29% Similarity=0.429 Sum_probs=159.2
Q ss_pred EEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHH
Q 000860 693 LVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKD 771 (1250)
Q Consensus 693 i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~ 771 (1250)
|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+||+||+.|....+ ..+.+
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~--p~~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~---~~~~~ 75 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQ--PDSGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMR---KVPRA 75 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhc---CCCHH
Confidence 689999999999999999876 358999999987643 224567999999999999999999999876532 23344
Q ss_pred HHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhC-
Q 000860 772 QRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDT- 850 (1250)
Q Consensus 772 ~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~- 850 (1250)
+.+++++++++.++|.+..++.+. .||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++
T Consensus 76 ~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~ 150 (325)
T TIGR01187 76 EIKPRVLEALRLVQLEEFADRKPH-----QLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQL 150 (325)
T ss_pred HHHHHHHHHHHHcCCcchhcCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc
Confidence 556778999999999988887765 49999999999999999999999999999999999999999999998765
Q ss_pred CCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCC
Q 000860 851 GRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLG 888 (1250)
Q Consensus 851 g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~ 888 (1250)
|+|||++||++. ++...+|++++|++ |+++..|+.+
T Consensus 151 g~tiiivTHd~~-e~~~~~d~i~vl~~-G~i~~~g~~~ 186 (325)
T TIGR01187 151 GITFVFVTHDQE-EAMTMSDRIAIMRK-GKIAQIGTPE 186 (325)
T ss_pred CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 899999999985 67889999999985 7898888863
No 394
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-32 Score=300.78 Aligned_cols=186 Identities=26% Similarity=0.340 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||+++|+|+.+|. +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++...++...
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~- 105 (220)
T cd03293 32 FVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLDNVALGLELQGVPK- 105 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHHHHHHHHHHHcCCCH-
Confidence 47999999999999999999999864 9999999988753 35679999999888888999999988654322100
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
.. ....++++++.+||.+..++.+++ ||||||||++|||||
T Consensus 106 ----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrl~la~al 146 (220)
T cd03293 106 ----------AE------------------------ARERAEELLELVGLSGFENAYPHQ-----LSGGMRQRVALARAL 146 (220)
T ss_pred ----------HH------------------------HHHHHHHHHHHcCChhhhhCCccc-----CCHHHHHHHHHHHHH
Confidence 00 001256788999998777776654 999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEec--CCeEEeecChh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLS--DGYLVYQGPRA 232 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~--~G~i~~~G~~~ 232 (1250)
+.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+.+|++++|+ +|++++.++.+
T Consensus 147 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 147 AVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVT-HDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEe-cCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9999999999999999999999999999998665577888765 45667888999999999 79999887653
No 395
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-32 Score=304.13 Aligned_cols=200 Identities=24% Similarity=0.343 Sum_probs=157.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~ 104 (236)
T cd03219 28 IHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQART 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcc
Confidence 47999999999999999999999864 999999999875432 13569999999999999999999988754321
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... ........... .....++++++.+||++..++.+++ |||||||||+|
T Consensus 105 ~~~-~~~~~~~~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~l 154 (236)
T cd03219 105 GSG-LLLARARREER------------------------EARERAEELLERVGLADLADRPAGE-----LSYGQQRRLEI 154 (236)
T ss_pred ccc-cccccccccHH------------------------HHHHHHHHHHHHcCccchhhCChhh-----CCHHHHHHHHH
Confidence 100 00000000000 0012367789999998877776654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++. |+..++.+++|++++|++|++++.|+++++.
T Consensus 155 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vs-H~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 155 ARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVE-HDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-cCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 9999999999999999999999999999999999876 578887764 5567788899999999999999999988763
No 396
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-32 Score=303.43 Aligned_cols=191 Identities=26% Similarity=0.354 Sum_probs=157.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+|++||+.++...
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~ 109 (233)
T cd03258 33 IFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEI 109 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999865 99999999987532 1256799999999999899999999886543
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
++... .. ....++++++.+||.+..+..+. .|||||||||
T Consensus 110 ~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 149 (233)
T cd03258 110 AGVPK-----------AE------------------------IEERVLELLELVGLEDKADAYPA-----QLSGGQKQRV 149 (233)
T ss_pred cCCCH-----------HH------------------------HHHHHHHHHHHCCChhhhhcChh-----hCCHHHHHHH
Confidence 21100 00 00125678899999877776664 4999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.| +.+++.+.+|++++|++|++++.|+.+++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH-~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 150 GIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITH-EMEVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred HHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999999987655788887755 46677889999999999999999988775
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 229 ~ 229 (233)
T cd03258 229 F 229 (233)
T ss_pred h
Confidence 3
No 397
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=3.1e-32 Score=299.85 Aligned_cols=200 Identities=21% Similarity=0.240 Sum_probs=159.8
Q ss_pred eeeceEEEEe-----CCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCC
Q 000860 677 LLSNVSGIFS-----PGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQEDVHSPQVT 751 (1250)
Q Consensus 677 iL~~vs~~i~-----~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~q~~~~~~~lt 751 (1250)
.++|++++++ +||+++|+||||||||||+++|+|..+ +.+|+|.++|. .++|++|+....+.+|
T Consensus 9 ~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~--p~~G~i~~~g~---------~i~~~~q~~~~~~~~t 77 (246)
T cd03237 9 TLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLK--PDEGDIEIELD---------TVSYKPQYIKADYEGT 77 (246)
T ss_pred ccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCc---------eEEEecccccCCCCCC
Confidence 5667777765 799999999999999999999999876 35799999884 4899999987777899
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000860 752 IEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 831 (1250)
Q Consensus 752 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsg 831 (1250)
|+|++.+...... . .....+++++.+++.+..++.++. ||||||||++||++|+.+|++++|||||++
T Consensus 78 v~e~l~~~~~~~~----~---~~~~~~~~l~~l~l~~~~~~~~~~-----LSgGe~qrv~iaraL~~~p~llllDEPt~~ 145 (246)
T cd03237 78 VRDLLSSITKDFY----T---HPYFKTEIAKPLQIEQILDREVPE-----LSGGELQRVAIAACLSKDADIYLLDEPSAY 145 (246)
T ss_pred HHHHHHHHhhhcc----c---cHHHHHHHHHHcCCHHHhhCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999876432110 1 122357889999998877777654 999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEE--EeCCCCccchhHHHHhhhC
Q 000860 832 LDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI--YGGKLGVHSQIMIDYFQGL 901 (1250)
Q Consensus 832 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~--~~g~~~~~~~~~~~yf~~~ 901 (1250)
||+.++..+.+.|+++++ .|+|||+++|++. .+...+|++++|.. +..+ ..+++....+.+..|++..
T Consensus 146 LD~~~~~~l~~~l~~~~~~~~~tiiivsHd~~-~~~~~~d~i~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 216 (246)
T cd03237 146 LDVEQRLMASKVIRRFAENNEKTAFVVEHDII-MIDYLADRLIVFEG-EPSVNGVANPPQSLRSGMNRFLKNL 216 (246)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEcC-CCeeEEEeCCchHHHHHHHHHHHHC
Confidence 999999999999999875 4899999999974 56678999999963 3333 2233332234567777765
No 398
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=271.20 Aligned_cols=190 Identities=25% Similarity=0.348 Sum_probs=162.4
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcch
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDSF 81 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~~ 81 (1250)
++++||||||||||||+++|+.+|. .|.|.+||+++... -...|.|.|++.++|=+||.||++|+.++++.++..
T Consensus 34 vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~ 108 (259)
T COG4525 34 VVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQ 108 (259)
T ss_pred EEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHHHHHHHHHHhcCCCHHH
Confidence 6899999999999999999999865 99999999988543 234689999999999999999999999998765321
Q ss_pred hhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHHh
Q 000860 82 AAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMIV 161 (1250)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al~ 161 (1250)
+ .+++.+.+...||++..+..| -+|||||||||.|||||.
T Consensus 109 --------R---------------------------~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa 148 (259)
T COG4525 109 --------R---------------------------REIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALA 148 (259)
T ss_pred --------H---------------------------HHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhh
Confidence 0 123667899999998777665 459999999999999999
Q ss_pred cCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEec--CCeEEeecChhhHHHH
Q 000860 162 GPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLS--DGYLVYQGPRAEVLEF 237 (1250)
Q Consensus 162 ~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~--~G~i~~~G~~~~~~~~ 237 (1250)
.+|++|+||||+++||+.+++++.+.|.++.+..|+.++++ +|+.++..-+++++++|+ .|+|+..-+++-.+.|
T Consensus 149 ~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lli-TH~ieEAlflatrLvvlsp~pgRvv~~~~~df~rR~ 225 (259)
T COG4525 149 VEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLI-THDIEEALFLATRLVVLSPGPGRVVERLPLDFARRY 225 (259)
T ss_pred cCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEE-eccHHHHHhhhheeEEecCCCceeeEecCCCHHHHh
Confidence 99999999999999999999999999999888888887775 567889999999999998 5899988777754443
No 399
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.2e-32 Score=313.43 Aligned_cols=190 Identities=26% Similarity=0.409 Sum_probs=161.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.+||++|++.+++.+||.||+.+.+.+.+..
T Consensus 30 i~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~ 106 (301)
T TIGR03522 30 IVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMK 106 (301)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999865 99999999987532 34567999999999999999999999876543211
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + ...+++++++.+||++..++.++. ||||||||++||+
T Consensus 107 ~~-----------~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv~la~ 146 (301)
T TIGR03522 107 GQ-----------L------------------------LKQRVEEMIELVGLRPEQHKKIGQ-----LSKGYRQRVGLAQ 146 (301)
T ss_pred HH-----------H------------------------HHHHHHHHHHHCCCchHhcCchhh-----CCHHHHHHHHHHH
Confidence 00 0 001256789999999888887765 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|++|+|||||+|||+.++..+++.|+++.+ ++|+|++ +|+.+++.++||||++|++|++++.|+.+++.+
T Consensus 147 al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~-sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 147 ALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILS-THIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEE-cCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999853 6787776 566788999999999999999999999998765
No 400
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=319.65 Aligned_cols=186 Identities=26% Similarity=0.413 Sum_probs=158.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++|++|+..+++.+||+||+.|+.+
T Consensus 26 ~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 102 (352)
T PRK11144 26 ITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA 102 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh
Confidence 47999999999999999999999865 99999999887431 235679999999999999999999988532
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.. . +.+++++++.+||.+..+..+++ ||||||||
T Consensus 103 ~~----------------~-------------------------~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qR 136 (352)
T PRK11144 103 KS----------------M-------------------------VAQFDKIVALLGIEPLLDRYPGS-----LSGGEKQR 136 (352)
T ss_pred hh----------------h-------------------------HHHHHHHHHHcCCchhhhCCccc-----CCHHHHHH
Confidence 00 0 01256788999998877777654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+++|++++|++|+++..|++++
T Consensus 137 valaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vT-Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~ 215 (352)
T PRK11144 137 VAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVS-HSLDEILRLADRVVVLEQGKVKAFGPLEE 215 (352)
T ss_pred HHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEe-cCHHHHHHhCCEEEEEeCCEEEEecCHHH
Confidence 99999999999999999999999999999999999998876578887764 55678889999999999999999999988
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+.+
T Consensus 216 i~~ 218 (352)
T PRK11144 216 VWA 218 (352)
T ss_pred HHh
Confidence 743
No 401
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-33 Score=307.05 Aligned_cols=217 Identities=28% Similarity=0.400 Sum_probs=179.8
Q ss_pred CCeeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECC
Q 000860 646 HPLTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISG 725 (1250)
Q Consensus 646 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g 725 (1250)
.+..+.|.++++.|.. ++++|+++|+++++|+++|++||||+||||++++|..... ..+|.|.+||
T Consensus 259 ~~g~v~F~~V~F~y~~------------~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD--~~sG~I~id~ 324 (497)
T COG5265 259 RLGAVAFINVSFAYDP------------RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD--VNSGSITIDG 324 (497)
T ss_pred ccceEEEEEEEeeccc------------cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC--CcCceEEEcc
Confidence 3456899999998853 5689999999999999999999999999999999998665 4589999999
Q ss_pred ccCC---cccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH---HcCCcccccccccCCCC
Q 000860 726 YPKE---QSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMS---LVELDSLRHALVGSPGS 799 (1250)
Q Consensus 726 ~~~~---~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~---~l~l~~~~~~~v~~~~~ 799 (1250)
+++. ....|+.||.||||..|| +.|+..|+.|+.. ..+.+++.+.++..-. .-.+.+..++.||+.+.
T Consensus 325 qdir~vtq~slR~aIg~VPQDtvLF-NDti~yni~ygr~-----~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 325 QDIRDVTQQSLRRAIGIVPQDTVLF-NDTIAYNIKYGRP-----DATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred hhHHHhHHHHHHHHhCcCcccceeh-hhhHHHHHhccCc-----cccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 9864 356788999999999888 5699999987632 3345544433332110 11356667888988554
Q ss_pred CcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 800 FGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 800 ~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.|||||||||+|||+++.+|+||++||+||+||..+++.++..|++.+ +|+|.+++.|+.| +.-.+|.|++|++ |
T Consensus 399 -klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~-~~rttlviahrls--ti~~adeiivl~~-g 473 (497)
T COG5265 399 -KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS-AGRTTLVIAHRLS--TIIDADEIIVLDN-G 473 (497)
T ss_pred -eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh-CCCeEEEEeehhh--hccCCceEEEeeC-C
Confidence 399999999999999999999999999999999999999999999986 6999999999986 4567899999985 8
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+-
T Consensus 474 ~i~erg~h 481 (497)
T COG5265 474 RIVERGTH 481 (497)
T ss_pred EEEecCcH
Confidence 99999985
No 402
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-32 Score=316.98 Aligned_cols=192 Identities=23% Similarity=0.350 Sum_probs=160.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCe----ecCcc---c---c-cceEEeeccccccCCCCCHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGW----ELDEF---Q---V-QRASAYIGQTDNHIAELTVRETLD 69 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~----~~~~~---~---~-~~~~~yv~Q~~~~~~~~TV~e~l~ 69 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|. ++... . . ++.++||+|+..+++.+||+||+.
T Consensus 52 i~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~ 128 (382)
T TIGR03415 52 ICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVA 128 (382)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHH
Confidence 47999999999999999999999865 999999996 33221 1 1 257999999999999999999999
Q ss_pred HHHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccc
Q 000860 70 FAARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGG 149 (1250)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 149 (1250)
|+....+.... +. +.+++++++.+||.+..+..+++ ||||
T Consensus 129 ~~~~~~g~~~~-----------~~------------------------~~~a~e~le~vgL~~~~~~~~~~-----LSgG 168 (382)
T TIGR03415 129 FGLEMQGMPEA-----------ER------------------------RKRVDEQLELVGLAQWADKKPGE-----LSGG 168 (382)
T ss_pred HHHHhcCCCHH-----------HH------------------------HHHHHHHHHHcCCchhhcCChhh-----CCHH
Confidence 98644321110 00 11356789999998887777654 9999
Q ss_pred cchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 150 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 150 qkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.++.++|+|++. |+.+++.+++|+|++|++|+++..|
T Consensus 169 q~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iT-Hdl~e~~~l~DrI~vl~~G~iv~~g 247 (382)
T TIGR03415 169 MQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVS-HDLDEALKIGNRIAIMEGGRIIQHG 247 (382)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEec
Confidence 999999999999999999999999999999999999999998776678888874 5577888999999999999999999
Q ss_pred ChhhHHH
Q 000860 230 PRAEVLE 236 (1250)
Q Consensus 230 ~~~~~~~ 236 (1250)
+++++.+
T Consensus 248 ~~~ei~~ 254 (382)
T TIGR03415 248 TPEEIVL 254 (382)
T ss_pred CHHHHhh
Confidence 9988753
No 403
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.7e-32 Score=302.17 Aligned_cols=190 Identities=23% Similarity=0.369 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG 104 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC
Confidence 47999999999999999999999865 999999998874322 23569999999999999999999988643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ ....++++++.+|+.+..++.+++ ||||||||++|
T Consensus 105 ~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~l 144 (232)
T cd03218 105 LSK-----------KE------------------------REEKLEELLEEFHITHLRKSKASS-----LSGGERRRVEI 144 (232)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHcCChhhhhCChhh-----CCHHHHHHHHH
Confidence 100 00 001256788899998877777654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .++|+|++. |+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 145 a~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~s-H~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 145 ARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITD-HNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999999999999999999999875 477877764 5567888999999999999999999987753
No 404
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1e-32 Score=300.19 Aligned_cols=180 Identities=26% Similarity=0.349 Sum_probs=148.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~ 107 (216)
T TIGR00960 31 MVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRI 107 (216)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHh
Confidence 47999999999999999999999864 99999999987432 1356799999999899999999999887543
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+... .+ .+.+++++++.+||.+..++.+++ |||||||||
T Consensus 108 ~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv 147 (216)
T TIGR00960 108 IGVPP-----------RD------------------------ANERVSAALEKVGLEGKAHALPMQ-----LSGGEQQRV 147 (216)
T ss_pred cCCCH-----------HH------------------------HHHHHHHHHHHcCChhhhhCChhh-----CCHHHHHHH
Confidence 21100 00 011256788999998877777654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeE
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYL 225 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i 225 (1250)
+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++. |+.+.+.+++|++++|++|++
T Consensus 148 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vs-H~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 148 AIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVAT-HDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999999865 477877764 556777789999999999974
No 405
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-32 Score=303.97 Aligned_cols=199 Identities=28% Similarity=0.360 Sum_probs=157.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 105 (241)
T cd03256 29 FVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLG 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcc
Confidence 47999999999999999999999864 99999999987532 2356799999998889999999999875321
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.. ......... ... ....+++++++.+||.+..++.++ +|||||||||
T Consensus 106 ~~---~~~~~~~~~----------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 153 (241)
T cd03256 106 RR---STWRSLFGL----------FPK--------------EEKQRALAALERVGLLDKAYQRAD-----QLSGGQQQRV 153 (241)
T ss_pred cc---hhhhhhccc----------CcH--------------HHHHHHHHHHHHcCChhhhCCCcc-----cCCHHHHHHH
Confidence 00 000000000 000 001235678899999877676654 4999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++|||||||+|||+.++..+.+.|++++++.++|+|++. |+.+++.+++|++++|++|++++.|+++++
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~t-H~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSL-HQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 9999999999999999999999999999999999998765578887764 556778889999999999999999998876
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 233 ~ 233 (241)
T cd03256 233 T 233 (241)
T ss_pred h
Confidence 3
No 406
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.3e-32 Score=319.45 Aligned_cols=190 Identities=29% Similarity=0.465 Sum_probs=159.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.|+..
T Consensus 25 i~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 101 (354)
T TIGR02142 25 VTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMK 101 (354)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhh
Confidence 47999999999999999999999864 99999999987421 235679999999999999999999988643
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
... . .+ .+.+++++++.+||.+..++.+.+ ||||||||
T Consensus 102 ~~~--~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGqkqR 139 (354)
T TIGR02142 102 RAR--P-----------SE------------------------RRISFERVIELLGIGHLLGRLPGR-----LSGGEKQR 139 (354)
T ss_pred ccC--h-----------hH------------------------HHHHHHHHHHHcCChhHhcCChhh-----CCHHHHHH
Confidence 110 0 00 011256789999998877877654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |+.+++..++|++++|++|+++..|++++
T Consensus 140 valAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivt-H~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 218 (354)
T TIGR02142 140 VAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVS-HSLQEVLRLADRVVVLEDGRVAAAGPIAE 218 (354)
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEeCCEEEEECCHHH
Confidence 99999999999999999999999999999999999998775578887775 55678888999999999999999999888
Q ss_pred HHH
Q 000860 234 VLE 236 (1250)
Q Consensus 234 ~~~ 236 (1250)
+.+
T Consensus 219 ~~~ 221 (354)
T TIGR02142 219 VWA 221 (354)
T ss_pred Hhc
Confidence 643
No 407
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-32 Score=309.87 Aligned_cols=191 Identities=22% Similarity=0.339 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc-------ccccceEEeecccc-ccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE-------FQVQRASAYIGQTD-NHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~-------~~~~~~~~yv~Q~~-~~~~~~TV~e~l~f~~ 72 (1250)
+++|+||||||||||+++|+|+.+|+ +|+|.++|+++.. ...++.++||+|++ ..+...||+||+.|+.
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~ 111 (290)
T PRK13634 35 YVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGP 111 (290)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHH
Confidence 47999999999999999999999865 9999999998742 12356799999985 2344579999999875
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
...+.... + ..++++++++.+||. +..++.+.. ||||||
T Consensus 112 ~~~~~~~~-----------~------------------------~~~~~~~~l~~~gL~~~~~~~~~~~-----LSgGq~ 151 (290)
T PRK13634 112 MNFGVSEE-----------D------------------------AKQKAREMIELVGLPEELLARSPFE-----LSGGQM 151 (290)
T ss_pred HHcCCCHH-----------H------------------------HHHHHHHHHHHCCCChhhhhCCccc-----CCHHHH
Confidence 43221100 0 011367789999996 556766654 999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||+|||||+.+|++|||||||+|||+.++.++.+.|++++++.|.|+|++. |+..++.+.+|||++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiit-Hd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVT-HSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999999776678888774 556778889999999999999999998
Q ss_pred hhHH
Q 000860 232 AEVL 235 (1250)
Q Consensus 232 ~~~~ 235 (1250)
+++.
T Consensus 231 ~~~~ 234 (290)
T PRK13634 231 REIF 234 (290)
T ss_pred HHHh
Confidence 8764
No 408
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.2e-33 Score=321.33 Aligned_cols=194 Identities=27% Similarity=0.423 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||||+|+|+++|. +|+|.++|.++... ..++.++||+|+..+++.+||+||+.++......
T Consensus 31 iv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~ 107 (402)
T PRK09536 31 LVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRS 107 (402)
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcc
Confidence 47999999999999999999999865 99999999987542 3467899999998888899999999885321100
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
... .... ....+++++++.+||.+..++.+.+ |||||||||+||
T Consensus 108 ~~~------~~~~-------------------------~~~~~v~~~le~vgl~~~~~~~~~~-----LSgGerQRv~IA 151 (402)
T PRK09536 108 RFD------TWTE-------------------------TDRAAVERAMERTGVAQFADRPVTS-----LSGGERQRVLLA 151 (402)
T ss_pred ccc------CCCH-------------------------HHHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHHHHH
Confidence 000 0000 0012367889999999888877654 999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||+++|++|||||||+|||+.++.++++.|+++++ .++|+|++ +|+.+++.+++||+++|++|++++.|+++++.
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIiv-sHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAA-IHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEE-ECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999986 47888876 45678888999999999999999999998864
No 409
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=1.7e-32 Score=314.69 Aligned_cols=188 Identities=26% Similarity=0.353 Sum_probs=158.3
Q ss_pred EeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCcchh
Q 000860 4 LLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGANDSFA 82 (1250)
Q Consensus 4 ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~~~ 82 (1250)
|+|||||||||||++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.|+.+.++....
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~---~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~-- 75 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPD---SGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVPRA-- 75 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCCHH--
Confidence 68999999999999999999865 999999999875432 356799999999999999999999997543211100
Q ss_pred hHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHHhc
Q 000860 83 AYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMIVG 162 (1250)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al~~ 162 (1250)
+ .+.+++++++.+||.+..++.+. +|||||||||+|||||+.
T Consensus 76 ---------~------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qRvalaraL~~ 117 (325)
T TIGR01187 76 ---------E------------------------IKPRVLEALRLVQLEEFADRKPH-----QLSGGQQQRVALARALVF 117 (325)
T ss_pred ---------H------------------------HHHHHHHHHHHcCCcchhcCChh-----hCCHHHHHHHHHHHHHHh
Confidence 0 00125678999999887777665 499999999999999999
Q ss_pred CCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 163 PRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 163 ~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
+|+++||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+++|+|++|++|+++..|+++++.
T Consensus 118 ~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tiiivT-Hd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~ 189 (325)
T TIGR01187 118 KPKILLLDEPLSALDKKLRDQMQLELKTIQEQLGITFVFVT-HDQEEAMTMSDRIAIMRKGKIAQIGTPEEIY 189 (325)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999998776678888774 5567888999999999999999999998874
No 410
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-32 Score=296.84 Aligned_cols=185 Identities=25% Similarity=0.384 Sum_probs=153.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++..||+||+.++....+...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~ 104 (213)
T cd03301 28 FVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVPK 104 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCCCH
Confidence 47899999999999999999999864 999999999875322 24579999999888888999999988653321100
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.+ .+++++++++.+||.+..+..+++ ||||||||++||||
T Consensus 105 -----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr~~lara 144 (213)
T cd03301 105 -----------DE------------------------IDERVREVAELLQIEHLLDRKPKQ-----LSGGQRQRVALGRA 144 (213)
T ss_pred -----------HH------------------------HHHHHHHHHHHcCCHHHHhCChhh-----CCHHHHHHHHHHHH
Confidence 00 011256788999998877777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.| +..++.+.+|++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH-~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTH-DQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999987655788888754 467778899999999999998876
No 411
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-32 Score=296.86 Aligned_cols=177 Identities=25% Similarity=0.352 Sum_probs=146.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccc-cCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDN-HIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++.....++.++|++|++. .+...||+||+.++..... .
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~--~ 102 (205)
T cd03226 28 IIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD--A 102 (205)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcC--c
Confidence 47999999999999999999999864 9999999998754344567999999863 3456799999987532110 0
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.+.+++++++.+||.+..++.+++ ||||||||++||||
T Consensus 103 -------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~lara 140 (205)
T cd03226 103 -------------------------------------GNEQAETVLKDLDLYALKERHPLS-----LSGGQKQRLAIAAA 140 (205)
T ss_pred -------------------------------------cHHHHHHHHHHcCCchhcCCCchh-----CCHHHHHHHHHHHH
Confidence 001256788999998877777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEE
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLV 226 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~ 226 (1250)
|+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++. |+..++.+++|++++|++|+++
T Consensus 141 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~s-H~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 141 LLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVIT-HDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999999999875 478888775 4566777899999999999874
No 412
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-32 Score=309.74 Aligned_cols=202 Identities=23% Similarity=0.339 Sum_probs=159.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc-------ccccceEEeecccc-ccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE-------FQVQRASAYIGQTD-NHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~-------~~~~~~~~yv~Q~~-~~~~~~TV~e~l~f~~ 72 (1250)
+++|+||||||||||+++|+|+++|+ +|+|+++|.++.. ...++.++||+|++ ..+...||.||+.|+.
T Consensus 34 ~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~ 110 (288)
T PRK13643 34 YTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGP 110 (288)
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHH
Confidence 47999999999999999999999865 9999999998742 12466799999985 2333469999999875
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
...+... .+ .+.++.++++.+||. +..++.+. .||||||
T Consensus 111 ~~~~~~~-----------~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~-----~LSgGqk 150 (288)
T PRK13643 111 QNFGIPK-----------EK------------------------AEKIAAEKLEMVGLADEFWEKSPF-----ELSGGQM 150 (288)
T ss_pred HHcCCCH-----------HH------------------------HHHHHHHHHHHcCCChhhccCCcc-----cCCHHHH
Confidence 4322110 00 011356788899995 45565554 4999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ .|.|+|+++ |+..++.+++|+|++|++|+++++|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vt-Hd~~~~~~~~dri~~l~~G~i~~~g~~ 228 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVT-HLMDDVADYADYVYLLEKGHIISCGTP 228 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-cCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999875 478888775 456778889999999999999999999
Q ss_pred hhHHH---HHHhCCCCCCC
Q 000860 232 AEVLE---FFESLGFRLPP 247 (1250)
Q Consensus 232 ~~~~~---~f~~lG~~~~~ 247 (1250)
+++.+ .+...|+.+|.
T Consensus 229 ~~~~~~~~~~~~~~~~~p~ 247 (288)
T PRK13643 229 SDVFQEVDFLKAHELGVPK 247 (288)
T ss_pred HHHHcCHHHHHHcCCCCCh
Confidence 98743 33445555444
No 413
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.6e-32 Score=296.92 Aligned_cols=180 Identities=26% Similarity=0.388 Sum_probs=150.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-cccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+.+|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~-- 102 (208)
T cd03268 28 IYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI-- 102 (208)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC--
Confidence 47999999999999999999999864 99999999877432 2356799999998889899999999886432110
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.+.+++++++.+||.+..++.+++ |||||||||+||||
T Consensus 103 -------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~la~a 140 (208)
T cd03268 103 -------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG-----FSLGMKQRLGIALA 140 (208)
T ss_pred -------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----CCHHHHHHHHHHHH
Confidence 001256678899998877776654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++.+.+|++++|++|++++.|
T Consensus 141 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~t-H~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 141 LLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISS-HLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEc-CCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999876 578887774 5567777899999999999998765
No 414
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-32 Score=302.15 Aligned_cols=191 Identities=26% Similarity=0.389 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 105 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKW 105 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999864 99999999887532 2356799999999999899999999886543211
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcc--ccccccCCCccccCccccchhhH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDL--CSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
.. .+ ....++++++.+||.+ ..++.+. .|||||||||+
T Consensus 106 ~~-----------~~------------------------~~~~~~~~l~~l~l~~~~~~~~~~~-----~LS~G~~qrv~ 145 (242)
T cd03295 106 PK-----------EK------------------------IRERADELLALVGLDPAEFADRYPH-----ELSGGQQQRVG 145 (242)
T ss_pred CH-----------HH------------------------HHHHHHHHHHHcCCCcHHHHhcChh-----hCCHHHHHHHH
Confidence 00 00 0112567889999975 5555544 49999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.| +..++.+.+|++++|++|++++.|+++++.
T Consensus 146 laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH-~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 146 VARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTH-DIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEec-CHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999999999987655788887755 456778899999999999999999887763
No 415
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.5e-33 Score=345.79 Aligned_cols=192 Identities=28% Similarity=0.412 Sum_probs=153.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
.+||+||||||||||+++|+|++ |. +|+|.+||.++++. ..++.++||+|++.+|. .|++|||.++..
T Consensus 378 ~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~~---- 448 (588)
T PRK11174 378 RIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGNP---- 448 (588)
T ss_pred EEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCCC----
Confidence 37999999999999999999999 65 89999999988654 46789999999977765 699999988621
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
+... .++... .+.+ ..++.+ -.|+++.||.||+++ ..||||||||++||
T Consensus 449 ~~~~----eei~~a---------------l~~a---------~l~~~i--~~lp~G~dT~vge~G-~~LSGGQrQRialA 497 (588)
T PRK11174 449 DASD----EQLQQA---------------LENA---------WVSEFL--PLLPQGLDTPIGDQA-AGLSVGQAQRLALA 497 (588)
T ss_pred CCCH----HHHHHH---------------HHHh---------CHHHHH--HhcccccccccccCC-CCCCHHHHHHHHHH
Confidence 1111 011000 0000 011222 236778899999875 45999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|||+++|+||+||||||+||+.++.+|.+.|+++.+ ++|+|++.|++ +..+.+|+|++|++|++++.|+++++.+
T Consensus 498 RAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiItHrl--~~i~~aD~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 498 RALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMVTHQL--EDLAQWDQIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEEecCh--HHHHhCCEEEEEeCCeEeecCCHHHHHh
Confidence 999999999999999999999999999999998753 68888876664 6678899999999999999999999864
No 416
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=296.51 Aligned_cols=183 Identities=24% Similarity=0.360 Sum_probs=151.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.. ..++.++|++|++.+++.+||+||+.+....++....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~ 103 (210)
T cd03269 28 IFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLKKE 103 (210)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCChH
Confidence 47999999999999999999999864 9999999987753 3456799999999889999999999886543221100
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
+ .+..++++++.+||++..++.+++ ||||||||++||+||
T Consensus 104 -----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~la~al 143 (210)
T cd03269 104 -----------E------------------------ARRRIDEWLERLELSEYANKRVEE-----LSKGNQQKVQFIAAV 143 (210)
T ss_pred -----------H------------------------HHHHHHHHHHHcCChHHHhCcHhh-----CCHHHHHHHHHHHHH
Confidence 0 011256788999998777776654 999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
+.+|++++|||||+|||+.++..+.+.|+++.++ ++|+|++ +|+..++.+++|++++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~-~~tii~~-sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARA-GKTVILS-THQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEE-CCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999999999998754 7788776 45567778899999999999998764
No 417
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.8e-32 Score=298.97 Aligned_cols=180 Identities=26% Similarity=0.390 Sum_probs=147.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-------ccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-------VQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 108 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLL 108 (218)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHh
Confidence 47999999999999999999999864 999999999875321 24579999999989999999999998754
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.++... .+ .+..++++++.+||.+..++.+++ ||||||||
T Consensus 109 ~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr 148 (218)
T cd03255 109 LAGVPK-----------KE------------------------RRERAEELLERVGLGDRLNHYPSE-----LSGGQQQR 148 (218)
T ss_pred hcCCCH-----------HH------------------------HHHHHHHHHHHcCCchhhhcChhh-----cCHHHHHH
Confidence 322100 00 011256788999998777776654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeE
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYL 225 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i 225 (1250)
|+|||||+.+|++|||||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++. .+|++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHD-PELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECC-HHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999999999999999876457888887655 45554 8999999999974
No 418
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.6e-31 Score=299.11 Aligned_cols=197 Identities=23% Similarity=0.375 Sum_probs=154.9
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|+++. .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|
T Consensus 38 ~~l~i~nls~~---------------~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~--p~~G~I~i~g-- 98 (282)
T cd03291 38 NNLFFSNLCLV---------------GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELE--PSEGKIKHSG-- 98 (282)
T ss_pred CeEEEEEEEEe---------------cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECC--
Confidence 35899999873 1248999999999999999999999999999999999876 3579999987
Q ss_pred CCcccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccc-------ccccCCCCC
Q 000860 728 KEQSTFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRH-------ALVGSPGSF 800 (1250)
Q Consensus 728 ~~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~-------~~v~~~~~~ 800 (1250)
.++|++|++.+++. ||+||+.+.... .. ..+.++++.+++.+..+ +.++. ...
T Consensus 99 --------~i~yv~q~~~l~~~-tv~enl~~~~~~------~~----~~~~~~l~~~~l~~~l~~~~~~~~~~~~~-~~~ 158 (282)
T cd03291 99 --------RISFSSQFSWIMPG-TIKENIIFGVSY------DE----YRYKSVVKACQLEEDITKFPEKDNTVLGE-GGI 158 (282)
T ss_pred --------EEEEEeCccccccc-CHHHHhhccccc------CH----HHHHHHHHHhCCHHHHHhccccccceecC-CCC
Confidence 28999999887774 999999764211 11 11233444444433222 22221 224
Q ss_pred cCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHH-HHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCc
Q 000860 801 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAV-RNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGG 879 (1250)
Q Consensus 801 ~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l-~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg 879 (1250)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.+ +++. ++.|||+++|++. .+ ..+|++++|++ |
T Consensus 159 ~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~-~~~tIiiisH~~~-~~-~~~d~i~~l~~-G 234 (282)
T cd03291 159 TLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLM-ANKTRILVTSKME-HL-KKADKILILHE-G 234 (282)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhh-CCCEEEEEeCChH-HH-HhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999998864 5554 5799999999985 34 68999999985 7
Q ss_pred EEEEeCCC
Q 000860 880 RVIYGGKL 887 (1250)
Q Consensus 880 ~~~~~g~~ 887 (1250)
++++.|+.
T Consensus 235 ~i~~~g~~ 242 (282)
T cd03291 235 SSYFYGTF 242 (282)
T ss_pred EEEEECCH
Confidence 88888875
No 419
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.1e-32 Score=335.70 Aligned_cols=210 Identities=17% Similarity=0.248 Sum_probs=168.5
Q ss_pred eeEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCcc
Q 000860 648 LTMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 727 (1250)
Q Consensus 648 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~ 727 (1250)
..++++|+++.|+... ..++++|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 336 ~~i~~~~v~f~y~~~~--------~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~--p~~G~i~~~g~~ 405 (555)
T TIGR01194 336 DSIELKDVHMNPKAPE--------GSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYI--PQEGEILLDGAA 405 (555)
T ss_pred ceEEEEEEEEEeCCCC--------CCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 3689999999985321 012468999999999999999999999999999999999776 458999999998
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCccccccccc-CCCCCcCC
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVG-SPGSFGLS 803 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~-~~~~~~lS 803 (1250)
+.. ..+++.++||+|++.++. .|+++|+ . + +..++.++++++.+++.+..+.... ......||
T Consensus 406 i~~~~~~~~~~~i~~v~q~~~lf~-~ti~~n~------~-~-----~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~~~LS 472 (555)
T TIGR01194 406 VSADSRDDYRDLFSAIFADFHLFD-DLIGPDE------G-E-----HASLDNAQQYLQRLEIADKVKIEDGGFSTTTALS 472 (555)
T ss_pred CCCCCHHHHHhhCcEEccChhhhh-hhhhccc------c-c-----chhHHHHHHHHHHcCCchhhcccccccCCcccCC
Confidence 754 356788999999988775 4788763 1 1 1223457788899998776544322 11224699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHH-HHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEE
Q 000860 804 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVR-NTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVI 882 (1250)
Q Consensus 804 gGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~-~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~ 882 (1250)
||||||++|||+|+++|+|++||||||+||+.++..+.+.+. .+...|+|+|+++|+++ ..+.+|+|++|++ |+++
T Consensus 473 gGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~--~~~~~d~i~~l~~-G~i~ 549 (555)
T TIGR01194 473 TGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQ--YFELADQIIKLAA-GCIV 549 (555)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH--HHHhCCEEEEEEC-CEEE
Confidence 999999999999999999999999999999999999988664 45556899999999974 5689999999986 6766
Q ss_pred E
Q 000860 883 Y 883 (1250)
Q Consensus 883 ~ 883 (1250)
.
T Consensus 550 ~ 550 (555)
T TIGR01194 550 K 550 (555)
T ss_pred E
Confidence 4
No 420
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.6e-32 Score=298.04 Aligned_cols=188 Identities=30% Similarity=0.446 Sum_probs=155.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++..||+||+.+.....+..
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~ 106 (220)
T cd03263 30 IFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLP 106 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999864 99999999987432 34567999999988888999999998865432211
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + .+..++++++.+||.+..++.+++ ||||||||++|||
T Consensus 107 ~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~la~ 146 (220)
T cd03263 107 KS-----------E------------------------IKEEVELLLRVLGLTDKANKRART-----LSGGMKRKLSLAI 146 (220)
T ss_pred HH-----------H------------------------HHHHHHHHHHHcCCHHHHhChhhh-----CCHHHHHHHHHHH
Confidence 00 0 001256788999998877777654 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++ +|+...+.+.+|++++|++|++++.|+++++
T Consensus 147 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~-sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 147 ALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILT-THSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEE-cCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999999864 4777776 4556677789999999999999999987764
No 421
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.98 E-value=4.3e-32 Score=310.75 Aligned_cols=194 Identities=22% Similarity=0.244 Sum_probs=157.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeecccc--ccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTD--NHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~--~~~~~~TV~e~l~f~~ 72 (1250)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... ..++.++||+|++ .+++.+||.||+.+..
T Consensus 49 ~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l 125 (331)
T PRK15079 49 TLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 125 (331)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999864 99999999987543 1356799999996 5888999999998865
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
........ ..+ .++.++++++.+||. +..++.+ .+||||||
T Consensus 126 ~~~~~~~~---------~~~------------------------~~~~~~~~l~~vgl~~~~~~~~p-----~~LSgG~~ 167 (331)
T PRK15079 126 RTYHPKLS---------RQE------------------------VKDRVKAMMLKVGLLPNLINRYP-----HEFSGGQC 167 (331)
T ss_pred HHhccCCC---------HHH------------------------HHHHHHHHHHHcCCChHHhcCCc-----ccCCHHHH
Confidence 43210000 000 011356789999994 4455554 45999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||+|||||+.+|++||+||||+|||+.++.++++.|+++.++.+.|+|++ +|+...+.+++|+|++|.+|++++.|+.
T Consensus 168 QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~i-THdl~~~~~~~dri~vl~~G~ive~g~~ 246 (331)
T PRK15079 168 QRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFI-AHDLAVVKHISDRVLVMYLGHAVELGTY 246 (331)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 999999999999999999999999999999999999999977667787776 5667888889999999999999999999
Q ss_pred hhHHH
Q 000860 232 AEVLE 236 (1250)
Q Consensus 232 ~~~~~ 236 (1250)
+++.+
T Consensus 247 ~~i~~ 251 (331)
T PRK15079 247 DEVYH 251 (331)
T ss_pred HHHHc
Confidence 88753
No 422
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.6e-32 Score=306.36 Aligned_cols=190 Identities=23% Similarity=0.354 Sum_probs=157.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeecccc-ccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTD-NHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~-~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++ ..++..||+|||.|+....+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 35 WLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 47999999999999999999999865 99999999987532 2456799999986 46778899999988653221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.... + ..++++++++.+||.+..+..+++ ||||||||++|
T Consensus 112 ~~~~-----------~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LSgGq~qrv~l 151 (279)
T PRK13650 112 IPHE-----------E------------------------MKERVNEALELVGMQDFKEREPAR-----LSGGQKQRVAI 151 (279)
T ss_pred CCHH-----------H------------------------HHHHHHHHHHHCCCHhHhhCCccc-----CCHHHHHHHHH
Confidence 1100 0 011356789999998877777654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|+|||||+|||+.++..+++.|++++++.|+|+|++.|+ ..++ ..+|++++|++|+++..|+++++.
T Consensus 152 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~-~~~~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 152 AGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHD-LDEV-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999976558898887655 4555 579999999999999999988765
No 423
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.2e-32 Score=299.68 Aligned_cols=186 Identities=21% Similarity=0.294 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------c-cceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------V-QRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... . ++.++|++|++.+++.+||+||+.+...
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 37 MMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 47999999999999999999999864 999999999875432 1 2569999999888999999999988653
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
..+... .+ .+.+++++++.+||++..++.++ .||||||||
T Consensus 114 ~~~~~~-----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG~~qr 153 (233)
T PRK11629 114 IGKKKP-----------AE------------------------INSRALEMLAAVGLEHRANHRPS-----ELSGGERQR 153 (233)
T ss_pred hcCCCH-----------HH------------------------HHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHH
Confidence 221100 00 01135678999999877776654 499999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
++|||||+.+|++|||||||+|||+.++..+.+.|++++++.|+|+|++.|+ .+++.. +|++++|++|++++.|+.
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~-~~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHD-LQLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCC-HHHHHh-hCEEEEEECCEEEEEecc
Confidence 9999999999999999999999999999999999999876557888887554 455554 589999999999988763
No 424
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.98 E-value=2.6e-32 Score=302.95 Aligned_cols=198 Identities=24% Similarity=0.323 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 106 (243)
T TIGR02315 30 FVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLG 106 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccc
Confidence 47999999999999999999999864 99999999887432 1356799999998899999999999775311
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.. ... ........ . ..+.+++++++.+||.+..+..+. .|||||||||
T Consensus 107 ~~--~~~-~~~~~~~~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv 154 (243)
T TIGR02315 107 YK--PTW-RSLLGRFS----------E--------------EDKERALSALERVGLADKAYQRAD-----QLSGGQQQRV 154 (243)
T ss_pred cc--cch-hhhhcccc----------H--------------HHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHH
Confidence 00 000 00000000 0 001235678899999877776654 4999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++.++|+|++. |+...+.+++|++++|++|++++.|+++++
T Consensus 155 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~t-H~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 155 AIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINL-HQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999999999999998765577887764 556777789999999999999999988765
No 425
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.4e-32 Score=304.84 Aligned_cols=189 Identities=24% Similarity=0.298 Sum_probs=155.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccc-cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDN-HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++. .++..||.||+.|+....+
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 109 (274)
T PRK13647 33 KTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMG 109 (274)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcC
Confidence 47999999999999999999999865 99999999987532 23567999999852 4566899999988643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ .+.+++++++.+||.+..++.+.+ |||||||||+|
T Consensus 110 ~~~-----------~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~-----LSgG~~qrv~l 149 (274)
T PRK13647 110 LDK-----------DE------------------------VERRVEEALKAVRMWDFRDKPPYH-----LSYGQKKRVAI 149 (274)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHCCCHHHhcCChhh-----CCHHHHHHHHH
Confidence 100 00 011256789999998877877754 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
||||+.+|++|||||||+|||+.++.++.+.|++++++ +.|+|++. |+.+.+.+.+|++++|++|++++.|+++++
T Consensus 150 araL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g~tili~t-H~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 150 AGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-GKTVIVAT-HDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999999998764 78888774 556777889999999999999999998654
No 426
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.98 E-value=4.3e-32 Score=304.55 Aligned_cols=192 Identities=20% Similarity=0.339 Sum_probs=157.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++... ..++.++|++|+..+++.+||.||+.++...
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~ 111 (269)
T PRK11831 35 ITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLRE 111 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHH
Confidence 47999999999999999999999864 99999999887532 1345799999998889989999999876422
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.... . ..+ .+..++++++.+||.+..++.+++ |||||||||
T Consensus 112 ~~~~-~---------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv 152 (269)
T PRK11831 112 HTQL-P---------APL------------------------LHSTVMMKLEAVGLRGAAKLMPSE-----LSGGMARRA 152 (269)
T ss_pred ccCC-C---------HHH------------------------HHHHHHHHHHHcCChhhhhCChhh-----CCHHHHHHH
Confidence 1000 0 000 001256678999998877777654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+.+|++++|++|++++.|+++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivs-H~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVS-HDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-cCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998765577888775 556778889999999999999999998876
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 232 ~ 232 (269)
T PRK11831 232 Q 232 (269)
T ss_pred h
Confidence 4
No 427
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.98 E-value=2.7e-32 Score=298.44 Aligned_cols=188 Identities=27% Similarity=0.432 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~ 104 (222)
T cd03224 28 IVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR 104 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC
Confidence 47999999999999999999999865 999999998875322 24569999999999999999999988643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHh-CCccccccccCCCccccCccccchhhH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVL-GLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
.. + . ...++.+++.+ ++++..++.+.+ ||||||||++
T Consensus 105 --~~------~---~--------------------------~~~~~~~l~~~~~l~~~~~~~~~~-----LS~G~~qrv~ 142 (222)
T cd03224 105 --RA------K---R--------------------------KARLERVYELFPRLKERRKQLAGT-----LSGGEQQMLA 142 (222)
T ss_pred --ch------h---H--------------------------HHHHHHHHHHHHhhhhhhhCchhh-----CCHHHHHHHH
Confidence 00 0 0 01134556666 466666666544 9999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|++++|||||+|||+.++..+++.|+++.+ .++|+|++. |+..++.+.+|++++|++|++++.|+.+++.
T Consensus 143 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 143 IARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVE-QNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999999999999999875 477888775 5567788899999999999999999887653
No 428
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.98 E-value=2.8e-32 Score=297.41 Aligned_cols=184 Identities=29% Similarity=0.453 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 109 (218)
T cd03266 33 VTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLK 109 (218)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999865 99999999987532 34567999999998899899999998764332110
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
. .+ ...+++++++.+||.+..+..+++ ||||||||++|||
T Consensus 110 ~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~lar 149 (218)
T cd03266 110 G-----------DE------------------------LTARLEELADRLGMEELLDRRVGG-----FSTGMRQKVAIAR 149 (218)
T ss_pred H-----------HH------------------------HHHHHHHHHHHcCCHHHHhhhhhh-----cCHHHHHHHHHHH
Confidence 0 00 011356789999998877776654 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
||+.+|++|+|||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++...+|++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~t-H~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFST-HIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhcCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999865 478888775 4567788899999999999998754
No 429
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=99.98 E-value=2.3e-32 Score=299.83 Aligned_cols=189 Identities=23% Similarity=0.330 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCC-----CCCCceeeEEEECCeecCcc-----cccceEEeeccccccCCCCCHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKL-----DGNLNKSGSITYNGWELDEF-----QVQRASAYIGQTDNHIAELTVRETLDF 70 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~-----~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~~TV~e~l~f 70 (1250)
+++|+||||||||||+++|+|++ +| .+|+|.++|.++... ..++.++|++|++.++ .+||+||+.+
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~---~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~ 103 (227)
T cd03260 28 ITALIGPSGCGKSTLLRLLNRLNDLIPGAP---DEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAY 103 (227)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCC---CCeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHh
Confidence 47999999999999999999998 64 499999999987432 2356799999998877 7999999988
Q ss_pred HHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCcccc
Q 000860 71 AARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQ 150 (1250)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 150 (1250)
+....+.... .+ .+.+++++++.+||.+..+..+. ..+|||||
T Consensus 104 ~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~ 146 (227)
T cd03260 104 GLRLHGIKLK----------EE------------------------LDERVEEALRKAALWDEVKDRLH---ALGLSGGQ 146 (227)
T ss_pred HHHhcCCCcH----------HH------------------------HHHHHHHHHHHcCCChHHhccCC---cccCCHHH
Confidence 6543211000 00 01125678899999876565531 23599999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 151 KKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 151 kqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
|||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ +|+|++. |+..++.+.+|++++|++|++++.|+
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~s-H~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIVT-HNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEEe-ccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999999999998753 6777664 55677888999999999999999998
Q ss_pred hhh
Q 000860 231 RAE 233 (1250)
Q Consensus 231 ~~~ 233 (1250)
+++
T Consensus 224 ~~~ 226 (227)
T cd03260 224 TEQ 226 (227)
T ss_pred ccc
Confidence 765
No 430
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=2.5e-32 Score=269.04 Aligned_cols=217 Identities=23% Similarity=0.362 Sum_probs=184.9
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECC-cc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISG-YP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g-~~ 727 (1250)
.++.+|++.+++ ..++|+++||++.|||+-+|+|||||||||+|++|+|... +..|+++++| .+
T Consensus 5 iL~~~~vsVsF~-------------GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtr--p~~G~v~f~g~~d 69 (249)
T COG4674 5 ILYLDGVSVSFG-------------GFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTR--PQEGEVLFDGDTD 69 (249)
T ss_pred eEEEeceEEEEc-------------ceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCC--CCcceEEEcCchh
Confidence 578888888764 4568999999999999999999999999999999999876 3579999999 56
Q ss_pred CCcc----cccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCC-----CCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000860 728 KEQS----TFARISGYVEQEDVHSPQVTIEESLWFSANLRLPK-----EISKDQRHEFVEEVMSLVELDSLRHALVGSPG 798 (1250)
Q Consensus 728 ~~~~----~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~-----~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~ 798 (1250)
+... ..+.-||--+|.|..|+.+||+|||..+.+-+.+- .....+.+++++++++..||.+.+|...+.
T Consensus 70 l~~~~e~~IAr~GIGRKFQ~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~~-- 147 (249)
T COG4674 70 LTKLPEHRIARAGIGRKFQKPTVFENLTVRENLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAAL-- 147 (249)
T ss_pred hccCCHHHHHHhccCccccCCeehhhccHHHHHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhhh--
Confidence 5431 23456788899999999999999999986543210 011244567899999999999999988876
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 799 SFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 799 ~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
||.||||++-|++.++.+|++|+||||++|+--+.....-++|++++. +++|+++-||.. -+-+.+|+|.+|++
T Consensus 148 ---LSHGqKQwLEIGMll~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~-~hsilVVEHDM~-Fvr~~A~~VTVlh~- 221 (249)
T COG4674 148 ---LSHGQKQWLEIGMLLAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAG-KHSILVVEHDMG-FVREIADKVTVLHE- 221 (249)
T ss_pred ---hccchhhhhhhheeeccCCcEEEecCccCCCcHHHHHHHHHHHHHHhc-CceEEEEeccHH-HHHHhhheeEEEec-
Confidence 999999999999999999999999999999999999999999999974 689999999985 47889999999986
Q ss_pred cEEEEeCCCC
Q 000860 879 GRVIYGGKLG 888 (1250)
Q Consensus 879 g~~~~~g~~~ 888 (1250)
|.+...|+.+
T Consensus 222 G~VL~EGsld 231 (249)
T COG4674 222 GSVLAEGSLD 231 (249)
T ss_pred cceeecccHH
Confidence 7999999864
No 431
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.2e-32 Score=295.16 Aligned_cols=183 Identities=30% Similarity=0.463 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 27 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 103 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIP 103 (211)
T ss_pred cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCC
Confidence 47999999999999999999999865 99999999877432 23567999999998999999999998865432110
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.. + .+..++++++.+||++..++.+++ ||||||||++|||
T Consensus 104 ~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~la~ 143 (211)
T cd03264 104 SK-----------E------------------------VKARVDEVLELVNLGDRAKKKIGS-----LSGGMRRRVGIAQ 143 (211)
T ss_pred HH-----------H------------------------HHHHHHHHHHHCCCHHHHhCchhh-----CCHHHHHHHHHHH
Confidence 00 0 011256788999998877777654 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
||+.+|+++||||||+|||+.++..+.+.|+++++ +.|+|++ +|+...+.+.+|++++|++|++++.|
T Consensus 144 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~v-sH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 144 ALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILS-THIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEE-cCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999864 4677666 45667777899999999999998765
No 432
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.98 E-value=6.6e-32 Score=295.69 Aligned_cols=191 Identities=34% Similarity=0.551 Sum_probs=153.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||+++|+|++++..+.+|+|.++|.++.....++.++|++|++.+++.+||+||+.++.........
T Consensus 35 ~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~ 114 (226)
T cd03234 35 VMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKS 114 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhccccc
Confidence 47999999999999999999999722234999999999876445577899999999999999999999987543211100
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHH-HHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDY-VLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. .... ...++. .++.+++.+..++.++ .||||||||++||||
T Consensus 115 ~--------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~lara 157 (226)
T cd03234 115 S--------DAIR------------------------KKRVEDVLLRDLALTRIGGNLVK-----GISGGERRRVSIAVQ 157 (226)
T ss_pred c--------hHHH------------------------HHHHHHHHHHhhcchhhhccccc-----CcCHHHHHHHHHHHH
Confidence 0 0000 001233 6788888776666554 499999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|+.+|+++||||||+|||+.++..+.+.|+++.++ +.|+|++.|+...++.+.+|++++|++|++++.|
T Consensus 158 l~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 158 LLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999998654 7888888776556899999999999999998765
No 433
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.8e-32 Score=309.24 Aligned_cols=189 Identities=22% Similarity=0.385 Sum_probs=152.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------------------cccceEEeecccc--ccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------------------QVQRASAYIGQTD--NHI 59 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------------------~~~~~~~yv~Q~~--~~~ 59 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++||+|++ .++
T Consensus 54 ~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~ 130 (320)
T PRK13631 54 IYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF 130 (320)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhccc
Confidence 47999999999999999999999865 99999999886431 2467799999985 355
Q ss_pred CCCCHHHHHHHHHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-ccccccc
Q 000860 60 AELTVRETLDFAARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVV 138 (1250)
Q Consensus 60 ~~~TV~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~v 138 (1250)
+ .||+||+.|+....+... .+ ...+++++++.+||+ +..++.+
T Consensus 131 ~-~tv~eni~~~~~~~~~~~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~ 174 (320)
T PRK13631 131 K-DTIEKDIMFGPVALGVKK-----------SE------------------------AKKLAKFYLNKMGLDDSYLERSP 174 (320)
T ss_pred c-chHHHHHHhhHHhcCCCH-----------HH------------------------HHHHHHHHHHHcCCChhHhcCCc
Confidence 4 699999988753221100 00 001356788999996 4555544
Q ss_pred CCCccccCccccchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceE
Q 000860 139 GSEMLRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLV 218 (1250)
Q Consensus 139 g~~~~~~LSGGqkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~ 218 (1250)
.+|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++. |+.+++.+.+|+|+
T Consensus 175 -----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~Tiiivt-Hd~~~~~~~adri~ 247 (320)
T PRK13631 175 -----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVIT-HTMEHVLEVADEVI 247 (320)
T ss_pred -----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-cCHHHHHHhCCEEE
Confidence 44999999999999999999999999999999999999999999999865 478888774 45667778999999
Q ss_pred EecCCeEEeecChhhHH
Q 000860 219 LLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 219 ~l~~G~i~~~G~~~~~~ 235 (1250)
+|++|++++.|+++++.
T Consensus 248 vl~~G~i~~~g~~~~~~ 264 (320)
T PRK13631 248 VMDKGKILKTGTPYEIF 264 (320)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999998764
No 434
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.2e-32 Score=310.20 Aligned_cols=190 Identities=22% Similarity=0.330 Sum_probs=154.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc---------------------------ccccceEEeec
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE---------------------------FQVQRASAYIG 53 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~---------------------------~~~~~~~~yv~ 53 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.+... ...++.+|||+
T Consensus 35 ~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 35 FIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 47999999999999999999999865 8999999876421 12356799999
Q ss_pred ccc-ccCCCCCHHHHHHHHHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-
Q 000860 54 QTD-NHIAELTVRETLDFAARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD- 131 (1250)
Q Consensus 54 Q~~-~~~~~~TV~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~- 131 (1250)
|++ ..+...||+|||.|+....+.... + ...+++++++.+||.
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~~~~-----------~------------------------~~~~~~~~l~~~gL~~ 156 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGVSKE-----------E------------------------AKKRAAKYIELVGLDE 156 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCCCHH-----------H------------------------HHHHHHHHHHHcCCCh
Confidence 984 345567999999987543221100 0 011356789999996
Q ss_pred cccccccCCCccccCccccchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHH
Q 000860 132 LCSDTVVGSEMLRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETF 211 (1250)
Q Consensus 132 ~~~~t~vg~~~~~~LSGGqkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~ 211 (1250)
+..++.+.+ |||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|+|++ +|+.+.+.
T Consensus 157 ~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiiv-tHd~~~~~ 229 (305)
T PRK13651 157 SYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGKTIILV-THDLDNVL 229 (305)
T ss_pred hhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eeCHHHHH
Confidence 566766554 999999999999999999999999999999999999999999999875 47888776 45567788
Q ss_pred hhccceEEecCCeEEeecChhhHH
Q 000860 212 ELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 212 ~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
+.+|||++|++|++++.|+++++.
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999998864
No 435
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.1e-32 Score=295.29 Aligned_cols=185 Identities=27% Similarity=0.403 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..... ..
T Consensus 26 ~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~ 101 (211)
T cd03298 26 ITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL-KL 101 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhccccccc-Cc
Confidence 47999999999999999999999864 999999999875432 34679999999988999999999987532110 00
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. .. .+.+++++++.+||.+..++.+.+ ||||||||++||||
T Consensus 102 ~---------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~ia~a 142 (211)
T cd03298 102 T---------AE-------------------------DRQAIEVALARVGLAGLEKRLPGE-----LSGGERQRVALARV 142 (211)
T ss_pred c---------HH-------------------------HHHHHHHHHHHcCCHHHHhCCccc-----CCHHHHHHHHHHHH
Confidence 0 00 011256789999998777777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|+.+|++++|||||+|||+.++..+.+.|+++.++.+.|+|++ +|+..++.+.+|++++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~-sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMV-THQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-ecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999876557888876 45567788899999999999998654
No 436
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.98 E-value=7.8e-32 Score=297.19 Aligned_cols=191 Identities=28% Similarity=0.368 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ...+.++|++|++.+++.+|++||+.+....++..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~ 105 (236)
T TIGR03864 29 FVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLS 105 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCC
Confidence 47999999999999999999999865 99999999887432 22357999999988888999999998764332110
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
. .+ ....++++++.+||++..++.+++ ||||||||++|||
T Consensus 106 ~-----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrl~lar 145 (236)
T TIGR03864 106 R-----------AE------------------------ARERIAALLARLGLAERADDKVRE-----LNGGHRRRVEIAR 145 (236)
T ss_pred H-----------HH------------------------HHHHHHHHHHHcCChhhhcCChhh-----CCHHHHHHHHHHH
Confidence 0 00 001256788899998877777654 9999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+.+|+++||||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++. .+|++++|++|++++.|+++++.+
T Consensus 146 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~-~~~~~-~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 146 ALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHL-VDEIE-ADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecC-hhhHh-hCCEEEEEeCCeEEEeCCHHHHHH
Confidence 99999999999999999999999999999999875457888877554 45554 599999999999999999887653
No 437
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.98 E-value=5.8e-32 Score=296.40 Aligned_cols=189 Identities=27% Similarity=0.316 Sum_probs=153.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++..... ..+|++|++.+++.+||+||+.++.........
T Consensus 13 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~ 87 (230)
T TIGR01184 13 FISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIALAVDRVLPDLS 87 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHHHHHHhcccCCC
Confidence 47999999999999999999999864 9999999998754322 248999999999999999999886321000000
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
..+ .+..++++++.+||++..++.+++ ||||||||++|||||
T Consensus 88 ---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~la~al 129 (230)
T TIGR01184 88 ---------KSE------------------------RRAIVEEHIALVGLTEAADKRPGQ-----LSGGMKQRVAIARAL 129 (230)
T ss_pred ---------HHH------------------------HHHHHHHHHHHcCCHHHHcCChhh-----CCHHHHHHHHHHHHH
Confidence 000 011256788999998877777654 999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
+.+|+++||||||+|||+.++..+.+.|++++++.++|+|++. |+..++.+.+|++++|++|++++.|+..+
T Consensus 130 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~s-H~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 201 (230)
T TIGR01184 130 SIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVT-HDVDEALLLSDRVVMLTNGPAANIGQILE 201 (230)
T ss_pred HcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhcCEEEEEeCCcEecccCcee
Confidence 9999999999999999999999999999998765578888774 55677888999999999999998886554
No 438
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.4e-32 Score=306.81 Aligned_cols=191 Identities=20% Similarity=0.292 Sum_probs=155.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeecccc--ccCCCCCHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTD--NHIAELTVRETLDFA 71 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~--~~~~~~TV~e~l~f~ 71 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.+|||+|++ .+++ .||.||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~ 110 (286)
T PRK13646 35 YYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFG 110 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhh
Confidence 47999999999999999999999865 99999999987431 2467899999985 3444 6999999987
Q ss_pred HHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCcccc
Q 000860 72 ARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQ 150 (1250)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGq 150 (1250)
....+.... + ...+++++++.+||. +..++.+. .|||||
T Consensus 111 ~~~~~~~~~-----------~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq 150 (286)
T PRK13646 111 PKNFKMNLD-----------E------------------------VKNYAHRLLMDLGFSRDVMSQSPF-----QMSGGQ 150 (286)
T ss_pred HHHcCCCHH-----------H------------------------HHHHHHHHHHHcCCChhhhhCCcc-----cCCHHH
Confidence 532211100 0 011256788999996 56666654 499999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 151 KKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 151 kqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
|||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++.|.|+|++. |+.+++.+.+|++++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vt-H~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVS-HDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEe-cCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999765578888875 55677888999999999999999999
Q ss_pred hhhHHH
Q 000860 231 RAEVLE 236 (1250)
Q Consensus 231 ~~~~~~ 236 (1250)
++++.+
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 887643
No 439
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.98 E-value=2.3e-32 Score=273.35 Aligned_cols=192 Identities=27% Similarity=0.413 Sum_probs=157.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
|++|+||||||||||||.|+|++.|+ +|++.+||.+++.. +..+..+..||+..+-+..||+|-+.+|..-.+.
T Consensus 29 v~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~ 105 (259)
T COG4559 29 VLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS 105 (259)
T ss_pred EEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc
Confidence 58999999999999999999999865 99999999998654 3467789999998777778999999998644322
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
..+. .+.++.++++|...++.+.....+ ..|||||||||.+|
T Consensus 106 g~~~---------------------------------~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlA 147 (259)
T COG4559 106 GREP---------------------------------EEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLA 147 (259)
T ss_pred CCCc---------------------------------hhhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHH
Confidence 1110 001123567788888887665544 45999999999999
Q ss_pred HHHhc------CCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 158 EMIVG------PRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 158 ~al~~------~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|.|+. ++++|+||||||+||...+..+++..++++++ |..|+++ .|+.+-...++|||++|.+|+++..|++
T Consensus 148 RvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~~V~~V-LHDLNLAA~YaDrivll~~Grv~a~g~p 225 (259)
T COG4559 148 RVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GGAVLAV-LHDLNLAAQYADRIVLLHQGRVIASGSP 225 (259)
T ss_pred HHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CCcEEEE-EccchHHHHhhheeeeeeCCeEeecCCH
Confidence 99975 44589999999999999999999999999986 5666655 5778999999999999999999999999
Q ss_pred hhHH
Q 000860 232 AEVL 235 (1250)
Q Consensus 232 ~~~~ 235 (1250)
+++.
T Consensus 226 ~~vl 229 (259)
T COG4559 226 QDVL 229 (259)
T ss_pred HHhc
Confidence 9875
No 440
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=99.98 E-value=7.5e-32 Score=291.17 Aligned_cols=194 Identities=19% Similarity=0.229 Sum_probs=155.6
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEE-ECCccCCcccccceEEEEcCCCCCCCCCCHHHH
Q 000860 677 LLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIK-ISGYPKEQSTFARISGYVEQEDVHSPQVTIEES 755 (1250)
Q Consensus 677 iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~-~~g~~~~~~~~~~~~~yv~q~~~~~~~ltv~e~ 755 (1250)
+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|. ++|... .+.+++.++|.+|++||
T Consensus 2 vl~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--~~sG~i~~~~~~~~----------~~~~~~~l~~~ltv~en 69 (213)
T PRK15177 2 VLDKTDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDA--PDEGDFIGLRGDAL----------PLGANSFILPGLTGEEN 69 (213)
T ss_pred eeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcc--CCCCCEEEecCcee----------ccccccccCCcCcHHHH
Confidence 7999999999999999999999999999999999865 3579986 776432 13345667889999999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 000860 756 LWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 835 (1250)
Q Consensus 756 l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~ 835 (1250)
+.+..... +.+.++. .+.+.+.+++....++.++. ||||||||++||++|+.+|++++|||||++||+.
T Consensus 70 l~~~~~~~---~~~~~~~---~~~~~~~~~l~~~~~~~~~~-----lS~G~~qrv~la~al~~~p~llllDEP~~~lD~~ 138 (213)
T PRK15177 70 ARMMASLY---GLDGDEF---SHFCYQLTQLEQCYTDRVSE-----YSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNA 138 (213)
T ss_pred HHHHHHHc---CCCHHHH---HHHHHHHhChhHHhhchHhh-----cCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHH
Confidence 99876543 1222222 23344567787777777754 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCCCccchhHHHHhhh
Q 000860 836 AAAIVMRAVRNTVDTGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKLGVHSQIMIDYFQG 900 (1250)
Q Consensus 836 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~ 900 (1250)
++..+.+.+.+..+ ++|+|+++|++. ++...+|++++|.+ |++++.|+. +.+.++|..
T Consensus 139 ~~~~~~~~l~~~~~-~~~ii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~----~~~~~~~~~ 196 (213)
T PRK15177 139 TQLRMQAALACQLQ-QKGLIVLTHNPR-LIKEHCHAFGVLLH-GKITMCEDL----AQATALFEQ 196 (213)
T ss_pred HHHHHHHHHHHHhh-CCcEEEEECCHH-HHHHhcCeeEEEEC-CeEEEeCCH----HHHHHHHHH
Confidence 99999998865433 578999999985 56678999999985 899999987 455566543
No 441
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.98 E-value=8.5e-32 Score=299.98 Aligned_cols=191 Identities=21% Similarity=0.316 Sum_probs=155.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-----------cccceEEeeccccccCCCCCHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-----------QVQRASAYIGQTDNHIAELTVRETLD 69 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-----------~~~~~~~yv~Q~~~~~~~~TV~e~l~ 69 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++..||+||+.
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~ 107 (250)
T PRK11264 31 VVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENII 107 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHH
Confidence 47999999999999999999999864 99999999887421 23567999999988888899999998
Q ss_pred HHHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccc
Q 000860 70 FAARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGG 149 (1250)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 149 (1250)
++....... . ..+ ....++++++.+||.+..++.+++ ||||
T Consensus 108 ~~~~~~~~~-~---------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G 148 (250)
T PRK11264 108 EGPVIVKGE-P---------KEE------------------------ATARARELLAKVGLAGKETSYPRR-----LSGG 148 (250)
T ss_pred HHHHHhcCC-C---------HHH------------------------HHHHHHHHHHHcCCcchhhCChhh-----CChH
Confidence 753211000 0 000 011256788899998777766544 9999
Q ss_pred cchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 150 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 150 qkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++.+++|++++|++|++++.|
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~t-H~~~~~~~~~d~i~~l~~G~i~~~~ 226 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKRTMVIVT-HEMSFARDVADRAIFMDQGRIVEQG 226 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCCEEEEEe-CCHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999875 377887764 5567788899999999999999999
Q ss_pred ChhhHH
Q 000860 230 PRAEVL 235 (1250)
Q Consensus 230 ~~~~~~ 235 (1250)
+++++.
T Consensus 227 ~~~~~~ 232 (250)
T PRK11264 227 PAKALF 232 (250)
T ss_pred CHHHHh
Confidence 988764
No 442
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=99.98 E-value=6.8e-32 Score=360.32 Aligned_cols=214 Identities=24% Similarity=0.375 Sum_probs=171.4
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEEC-Ccc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS-GYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~-g~~ 727 (1250)
.++++||++.|+.. +++++|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.+| |.+
T Consensus 382 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~i~~g~~ 449 (1466)
T PTZ00265 382 KIQFKNVRFHYDTR----------KDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYD--PTEGDIIINDSHN 449 (1466)
T ss_pred cEEEEEEEEEcCCC----------CCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhcc--CCCCeEEEeCCcc
Confidence 68999999998531 13469999999999999999999999999999999999876 458999994 676
Q ss_pred CCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHHhc-CC---------CC-----C----------------------
Q 000860 728 KEQ---STFARISGYVEQEDVHSPQVTIEESLWFSANL-RL---------PK-----E---------------------- 767 (1250)
Q Consensus 728 ~~~---~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l-~~---------~~-----~---------------------- 767 (1250)
+.. ..+|+.+|||+|++.+|+ .||+||+.++... +. +. .
T Consensus 450 i~~~~~~~lr~~Ig~V~Q~~~LF~-~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1466)
T PTZ00265 450 LKDINLKWWRSKIGVVSQDPLLFS-NSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNT 528 (1466)
T ss_pred hhhCCHHHHHHhccEecccccchh-ccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccc
Confidence 543 346788999999999987 5999999986310 00 00 0
Q ss_pred --C---------CHHHHHHHHHHHHHHcCCccc-------ccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000860 768 --I---------SKDQRHEFVEEVMSLVELDSL-------RHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPT 829 (1250)
Q Consensus 768 --~---------~~~~~~~~v~~~l~~l~l~~~-------~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPT 829 (1250)
. .....++.+.++++.+++.+. .||.+|.. +..||||||||++|||||+++|+||+|||||
T Consensus 529 ~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~-g~~LSGGQkQRiaIARAll~~P~ILlLDEpT 607 (1466)
T PTZ00265 529 TDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSN-ASKLSGGQKQRISIARAIIRNPKILILDEAT 607 (1466)
T ss_pred cchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 0 001123456777777766543 46667664 3469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecC
Q 000860 830 SGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRG 878 (1250)
Q Consensus 830 sgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~g 878 (1250)
|+||+.++..+++.|+++++ +|+|+|+++|+++ ..+.+|+|++|++|
T Consensus 608 SaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls--~i~~aD~Iivl~~g 655 (1466)
T PTZ00265 608 SSLDNKSEYLVQKTINNLKGNENRITIIIAHRLS--TIRYANTIFVLSNR 655 (1466)
T ss_pred cccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHH--HHHhCCEEEEEeCC
Confidence 99999999999999999875 5899999999985 45789999999873
No 443
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=99.98 E-value=1.6e-31 Score=330.08 Aligned_cols=206 Identities=28% Similarity=0.386 Sum_probs=168.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|+++.++. ++++|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 6 ~l~i~~l~~~y~~------------~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~--p~~G~i~~~~~-- 69 (556)
T PRK11819 6 IYTMNRVSKVVPP------------KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDK--EFEGEARPAPG-- 69 (556)
T ss_pred EEEEeeEEEEeCC------------CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEecCC--
Confidence 6899999998741 2469999999999999999999999999999999999876 35799998752
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHh-c--------------CCCCC-CC-----------------HHHHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSAN-L--------------RLPKE-IS-----------------KDQRHE 775 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~-l--------------~~~~~-~~-----------------~~~~~~ 775 (1250)
..+|||+|++.+++.+||.|++.+... . ..+.. .. ..+..+
T Consensus 70 ------~~i~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (556)
T PRK11819 70 ------IKVGYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDS 143 (556)
T ss_pred ------CEEEEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHH
Confidence 358999999999999999999987521 0 00000 00 001245
Q ss_pred HHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEE
Q 000860 776 FVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVV 855 (1250)
Q Consensus 776 ~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 855 (1250)
+++++++.+|+.. .++.++ .|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||
T Consensus 144 ~~~~~l~~~gl~~-~~~~~~-----~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~---~~tvi 214 (556)
T PRK11819 144 QLEIAMDALRCPP-WDAKVT-----KLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDY---PGTVV 214 (556)
T ss_pred HHHHHHHhCCCCc-ccCchh-----hcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhC---CCeEE
Confidence 6788899999964 566665 49999999999999999999999999999999999999999999986 35999
Q ss_pred EEecCCCHHHHHhhcceeeeecCcEEE-EeCCC
Q 000860 856 CTIHQPSIEIFEAFDELLLMKRGGRVI-YGGKL 887 (1250)
Q Consensus 856 ~~~H~~~~~~~~~~d~v~~l~~gg~~~-~~g~~ 887 (1250)
+++|++. .+...+|++++|.+ |+++ +.|+.
T Consensus 215 iisHd~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 245 (556)
T PRK11819 215 AVTHDRY-FLDNVAGWILELDR-GRGIPWEGNY 245 (556)
T ss_pred EEeCCHH-HHHhhcCeEEEEeC-CEEEEecCCH
Confidence 9999985 57788999999986 5654 78875
No 444
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.98 E-value=9.8e-32 Score=297.38 Aligned_cols=190 Identities=21% Similarity=0.340 Sum_probs=156.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-----cccceEEeeccccccCCCCCHHHHHHHHHHc-
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-----QVQRASAYIGQTDNHIAELTVRETLDFAARC- 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~- 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 105 (240)
T PRK09493 29 VVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999864 99999999987532 2356799999998888889999999875321
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.. ..+ ....++++++.+||++..+..+.+ ||||||||+
T Consensus 106 ~~~~-----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv 145 (240)
T PRK09493 106 RGAS-----------KEE------------------------AEKQARELLAKVGLAERAHHYPSE-----LSGGQQQRV 145 (240)
T ss_pred cCCC-----------HHH------------------------HHHHHHHHHHHcCChHHHhcChhh-----cCHHHHHHH
Confidence 1100 000 011256788999998777766644 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++.+.+|++++|++|++++.|+.+++
T Consensus 146 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 146 AIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVT-HEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 999999999999999999999999999999999999865 478888775 456777789999999999999999998876
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 224 ~ 224 (240)
T PRK09493 224 I 224 (240)
T ss_pred h
Confidence 4
No 445
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.2e-32 Score=296.64 Aligned_cols=192 Identities=26% Similarity=0.391 Sum_probs=157.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++.... ...
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~-~~~ 102 (232)
T PRK10771 27 RVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG-LKL 102 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccc-cCC
Confidence 47999999999999999999999864 999999999875332 2457999999998999899999997753210 000
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. .. .+.+++++++.+||++..++.+.. ||||||||++||||
T Consensus 103 ~---------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv~lara 143 (232)
T PRK10771 103 N---------AA-------------------------QREKLHAIARQMGIEDLLARLPGQ-----LSGGQRQRVALARC 143 (232)
T ss_pred C---------HH-------------------------HHHHHHHHHHHcCcHHHHhCCccc-----CCHHHHHHHHHHHH
Confidence 0 00 011367789999998877877754 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
++.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+.+|++++|++|++++.|+++++.+
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVS-HSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEE-CCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999998765577888764 55677788999999999999999999887643
No 446
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=5.7e-32 Score=293.73 Aligned_cols=183 Identities=30% Similarity=0.439 Sum_probs=150.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+...
T Consensus 25 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~ 101 (214)
T cd03297 25 VTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLK 101 (214)
T ss_pred eEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHh
Confidence 47999999999999999999999864 99999999886421 235679999999888889999999987642
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.. .. ... +.+++++++.+||++..++.+++ ||||||||
T Consensus 102 ~~---~~----------~~~------------------------~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr 139 (214)
T cd03297 102 RK---RN----------RED------------------------RISVDELLDLLGLDHLLNRYPAQ-----LSGGEKQR 139 (214)
T ss_pred hC---CH----------HHH------------------------HHHHHHHHHHcCCHhHhhcCccc-----CCHHHHHH
Confidence 11 00 000 01256788899998766766654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
++|||||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++. |+..++.+.+|++++|++|++++.|
T Consensus 140 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 140 VALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVT-HDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEe-cCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999998765577877764 5567777899999999999998765
No 447
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.97 E-value=1.3e-31 Score=294.16 Aligned_cols=194 Identities=24% Similarity=0.267 Sum_probs=154.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeeEEEECCeecCcccc-cceEEeeccccc--cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGN-LNKSGSITYNGWELDEFQV-QRASAYIGQTDN--HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~-~~~~G~v~~~g~~~~~~~~-~~~~~yv~Q~~~--~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. .+.+|+|.++|.++..... ++.++|++|++. +.+.+|+.||+.+.....+
T Consensus 14 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~ 93 (230)
T TIGR02770 14 VLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLRSLG 93 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHHHcC
Confidence 47999999999999999999999861 0149999999998754433 357999999974 5567899999977543211
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcc---ccccccCCCccccCccccchh
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDL---CSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~vg~~~~~~LSGGqkqR 153 (1250)
... . + ...+++++++.+||++ ..++.++ .||||||||
T Consensus 94 ~~~----------~-~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~-----~LS~G~~qr 133 (230)
T TIGR02770 94 KLS----------K-Q------------------------ARALILEALEAVGLPDPEEVLKKYPF-----QLSGGMLQR 133 (230)
T ss_pred ccH----------H-H------------------------HHHHHHHHHHHcCCCchHHHHhCChh-----hcCHHHHHH
Confidence 000 0 0 0112567889999973 4455554 499999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
|+|||||+.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++. |+.+++...+|++++|++|+++..|++++
T Consensus 134 v~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 212 (230)
T TIGR02770 134 VMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLIT-HDLGVVARIADEVAVMDDGRIVERGTVKE 212 (230)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998765577888774 55667888999999999999999999887
Q ss_pred HH
Q 000860 234 VL 235 (1250)
Q Consensus 234 ~~ 235 (1250)
+.
T Consensus 213 ~~ 214 (230)
T TIGR02770 213 IF 214 (230)
T ss_pred HH
Confidence 64
No 448
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.97 E-value=1.3e-31 Score=294.48 Aligned_cols=187 Identities=25% Similarity=0.307 Sum_probs=147.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeecccc--ccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTD--NHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~--~~~~~~TV~e~l~f~~ 72 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++... ..++.++|++|++ .+++.+||+||+.++.
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~ 109 (228)
T cd03257 33 TLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPL 109 (228)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHH
Confidence 47999999999999999999999864 99999999987532 2356799999997 4667899999998865
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
...+..... ... +..++++++.+|+. +..+..+++ ||||||
T Consensus 110 ~~~~~~~~~---------~~~------------------------~~~~~~~l~~~~l~~~~~~~~~~~-----LS~G~~ 151 (228)
T cd03257 110 RIHGKLSKK---------EAR------------------------KEAVLLLLVGVGLPEEVLNRYPHE-----LSGGQR 151 (228)
T ss_pred HhccCCcHH---------HHH------------------------HHHHHHHHHHCCCChhHhhCCchh-----cCHHHH
Confidence 332110000 000 00124577888885 455665544 999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
|||+|||||+.+|++|||||||+|||+.++..+.+.|++++++.++|+|++.| +..++.+.+|++++|++|+++..|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH-~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITH-DLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999999987654778887754 466777799999999999998764
No 449
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.97 E-value=7.1e-32 Score=299.04 Aligned_cols=180 Identities=22% Similarity=0.292 Sum_probs=151.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++. ..++.++|++|++.+++.+||+||+.++.. . .
T Consensus 40 ~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~--~---~ 109 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLA--EAREDTRLMFQDARLLPWKKVIDNVGLGLK--G---Q 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHH--HhhCceEEEecCccCCCCCcHHHHHHhccc--c---h
Confidence 47999999999999999999999864 999999998763 235679999999888888999999987421 0 0
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
. +.+++++++.+||.+..+..++ .||||||||++|||||
T Consensus 110 ----------~--------------------------~~~~~~~l~~~gl~~~~~~~~~-----~LSgGqkqrl~laraL 148 (257)
T PRK11247 110 ----------W--------------------------RDAALQALAAVGLADRANEWPA-----ALSGGQKQRVALARAL 148 (257)
T ss_pred ----------H--------------------------HHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHH
Confidence 0 0124567888999877676654 4999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRA 232 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~ 232 (1250)
+.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++. |+...+.+.+|++++|++|+++++|+.+
T Consensus 149 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivs-Hd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 149 IHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVT-HDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999999998765578887764 5566778899999999999999988754
No 450
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.2e-32 Score=303.71 Aligned_cols=192 Identities=27% Similarity=0.374 Sum_probs=156.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc-----ccccceEEeeccccc-cCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE-----FQVQRASAYIGQTDN-HIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~-----~~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.. ...++.++|++|++. .+...||+||+.++...
T Consensus 34 ~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 110 (283)
T PRK13636 34 VTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVN 110 (283)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHH
Confidence 47999999999999999999999864 9999999998731 134567999999862 34567999999886432
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+... .+ ...+++++++.+||.+..++.+++ ||||||||+
T Consensus 111 ~~~~~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LS~G~~qrl 150 (283)
T PRK13636 111 LKLPE-----------DE------------------------VRKRVDNALKRTGIEHLKDKPTHC-----LSFGQKKRV 150 (283)
T ss_pred cCCCH-----------HH------------------------HHHHHHHHHHHCCChhhhhCCccc-----CCHHHHHHH
Confidence 21110 00 001256788999998877777654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++|||||||+|||+.++..+.+.|++++++.|+|+|++. |+.+++.+.+|++++|++|++++.|+++++
T Consensus 151 ~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvs-H~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 229 (283)
T PRK13636 151 AIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIAT-HDIDIVPLYCDNVFVMKEGRVILQGNPKEV 229 (283)
T ss_pred HHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEe-cCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999765578888774 556777789999999999999999999886
Q ss_pred HH
Q 000860 235 LE 236 (1250)
Q Consensus 235 ~~ 236 (1250)
.+
T Consensus 230 ~~ 231 (283)
T PRK13636 230 FA 231 (283)
T ss_pred hc
Confidence 53
No 451
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.3e-31 Score=297.63 Aligned_cols=186 Identities=25% Similarity=0.352 Sum_probs=152.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++.. ..+.++|++|++.+++..||+||+.++....+...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~- 102 (255)
T PRK11248 29 LLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVEK- 102 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCCH-
Confidence 47999999999999999999999864 9999999998753 23458999999888888999999987643221100
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
.+ ....++++++.+||.+..++.+++ ||||||||++|||||
T Consensus 103 ----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrl~laral 143 (255)
T PRK11248 103 ----------MQ------------------------RLEIAHQMLKKVGLEGAEKRYIWQ-----LSGGQRQRVGIARAL 143 (255)
T ss_pred ----------HH------------------------HHHHHHHHHHHcCChhHhhCChhh-----CCHHHHHHHHHHHHH
Confidence 00 001256788999998777766554 999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEec--CCeEEeecChh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLS--DGYLVYQGPRA 232 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~--~G~i~~~G~~~ 232 (1250)
+.+|++|||||||+|||+.++..+.+.|++++++.++|+|++. |+..++.+.+|++++|+ +|+++..++.+
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivs-H~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLIT-HDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999999999998654578887764 55678888999999998 59999887754
No 452
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=5.2e-32 Score=280.92 Aligned_cols=202 Identities=26% Similarity=0.396 Sum_probs=172.5
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC--cccccceEEEEc-CCCCCCCCC
Q 000860 674 KLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE--QSTFARISGYVE-QEDVHSPQV 750 (1250)
Q Consensus 674 ~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~--~~~~~~~~~yv~-q~~~~~~~l 750 (1250)
...+++|+||+|++|++++++|||||||||+||+|+|... +.+|.|.++|.+.- +..+-+.+++|+ |--.+.-.+
T Consensus 36 ~~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~--p~~G~v~V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdl 113 (325)
T COG4586 36 SIEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLL--PTSGKVRVNGKDPFRRREEYLRSIGLVMGQKLQLWWDL 113 (325)
T ss_pred hhhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccc--cCCCeEEecCcCcchhHHHHHHHHHHHhhhhheeeeec
Confidence 3457899999999999999999999999999999999876 45899999998632 233445566665 334455566
Q ss_pred CHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000860 751 TIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTS 830 (1250)
Q Consensus 751 tv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTs 830 (1250)
.+.|++.....+. ++++++-+++.+...+.|+|+...+..+. .||-|||.|+-||.+|+++|+||||||||-
T Consensus 114 p~~ds~~v~~~Iy---~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr-----~LSlGqRmraeLaaaLLh~p~VLfLDEpTv 185 (325)
T COG4586 114 PALDSLEVLKLIY---EIPDDEFAERLDFLTEILDLEGFLKWPVR-----KLSLGQRMRAELAAALLHPPKVLFLDEPTV 185 (325)
T ss_pred hhhhhHHHHHHHH---hCCHHHHHHHHHHHHHHhcchhhhhhhhh-----hccchHHHHHHHHHHhcCCCcEEEecCCcc
Confidence 7888776655443 56778888999999999999988888774 499999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhh-CCCEEEEEecCCCHHHHHhhcceeeeecCcEEEEeCCC
Q 000860 831 GLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIEIFEAFDELLLMKRGGRVIYGGKL 887 (1250)
Q Consensus 831 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~v~~l~~gg~~~~~g~~ 887 (1250)
|||..++..|.+.|++..+ .+.||+.+||..+ ++..+||||++++. |+++|+|+.
T Consensus 186 gLDV~aq~~ir~Flke~n~~~~aTVllTTH~~~-di~~lc~rv~~I~~-Gqlv~dg~l 241 (325)
T COG4586 186 GLDVNAQANIREFLKEYNEERQATVLLTTHIFD-DIATLCDRVLLIDQ-GQLVFDGTL 241 (325)
T ss_pred CcchhHHHHHHHHHHHHHHhhCceEEEEecchh-hHHHhhhheEEeeC-CcEeecccH
Confidence 9999999999999999864 4899999999986 79999999999986 899999997
No 453
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2e-31 Score=328.38 Aligned_cols=205 Identities=21% Similarity=0.358 Sum_probs=166.9
Q ss_pred EEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccCC
Q 000860 650 MTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 729 (1250)
Q Consensus 650 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~~ 729 (1250)
++++|++++++ ++++|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.
T Consensus 2 l~i~~ls~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~~--- 63 (530)
T PRK15064 2 LSTANITMQFG-------------AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLE--PSAGNVSLDPN--- 63 (530)
T ss_pred EEEEEEEEEeC-------------CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEecCC---
Confidence 67899998873 2469999999999999999999999999999999999765 35799999873
Q ss_pred cccccceEEEEcCCCCCCCCCCHHHHHHHHHh-c-----------CCCC---C--------------CCHHHHHHHHHHH
Q 000860 730 QSTFARISGYVEQEDVHSPQVTIEESLWFSAN-L-----------RLPK---E--------------ISKDQRHEFVEEV 780 (1250)
Q Consensus 730 ~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~-l-----------~~~~---~--------------~~~~~~~~~v~~~ 780 (1250)
+.+||++|++.+++.+||+|++.++.. . ..+. . ....+.+++++++
T Consensus 64 -----~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (530)
T PRK15064 64 -----ERLGKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGEL 138 (530)
T ss_pred -----CEEEEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 348999999988899999999986421 0 0000 0 0001234568889
Q ss_pred HHHcCCcccc-cccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEec
Q 000860 781 MSLVELDSLR-HALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIH 859 (1250)
Q Consensus 781 l~~l~l~~~~-~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 859 (1250)
++.+|+.+.. +..++ .||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++ .|.|||+++|
T Consensus 139 l~~~gl~~~~~~~~~~-----~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tiiivsH 210 (530)
T PRK15064 139 LLGVGIPEEQHYGLMS-----EVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE---RNSTMIIISH 210 (530)
T ss_pred HHhCCCChhHhcCchh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh---CCCeEEEEeC
Confidence 9999997643 34454 4999999999999999999999999999999999999999999864 5899999999
Q ss_pred CCCHHHHHhhcceeeeecCcEE-EEeCCC
Q 000860 860 QPSIEIFEAFDELLLMKRGGRV-IYGGKL 887 (1250)
Q Consensus 860 ~~~~~~~~~~d~v~~l~~gg~~-~~~g~~ 887 (1250)
++. .+...+|++++|++ |++ ++.|+.
T Consensus 211 d~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 237 (530)
T PRK15064 211 DRH-FLNSVCTHMADLDY-GELRVYPGNY 237 (530)
T ss_pred CHH-HHHhhcceEEEEeC-CEEEEecCCH
Confidence 985 57788999999986 676 577775
No 454
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.97 E-value=1.2e-31 Score=292.93 Aligned_cols=181 Identities=22% Similarity=0.342 Sum_probs=146.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------cc-ceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------VQ-RASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~-~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++.... .+ +.++|++|++.+++.+||+||+.+...
T Consensus 33 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 109 (221)
T TIGR02211 33 IVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLL 109 (221)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999864 999999999875321 12 569999999888889999999988643
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.+.... .+ ...++.++++.+||.+..++.++. ||||||||
T Consensus 110 ~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qr 149 (221)
T TIGR02211 110 IGKKSV-----------KE------------------------AKERAYEMLEKVGLEHRINHRPSE-----LSGGERQR 149 (221)
T ss_pred hcCCCH-----------HH------------------------HHHHHHHHHHHcCChhhhhCChhh-----CCHHHHHH
Confidence 221100 00 001256788999998777776654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEE
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLV 226 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~ 226 (1250)
|+|||||+.+|++|||||||+|||+.++..+.+.|++++++.++|+|++.|+ ...+ ..+|++++|++|+++
T Consensus 150 v~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~-~~~~-~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 150 VAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHD-LELA-KKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHH-hhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999999999876557888887655 4455 457999999999875
No 455
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=303.49 Aligned_cols=190 Identities=24% Similarity=0.355 Sum_probs=154.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeeccccc-cCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTDN-HIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~ 72 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++. .+..+||+||+.|+.
T Consensus 35 ~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 35 FVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 47999999999999999999999865 99999999987421 23467999999852 333589999998865
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
...+... .+ ...+++++++.+||. +..++.+++ ||||||
T Consensus 112 ~~~~~~~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~~-----LSgGq~ 151 (287)
T PRK13641 112 KNFGFSE-----------DE------------------------AKEKALKWLKKVGLSEDLISKSPFE-----LSGGQM 151 (287)
T ss_pred HHcCCCH-----------HH------------------------HHHHHHHHHHHcCCChhHhhCCccc-----CCHHHH
Confidence 3221100 00 011256789999996 566777655 999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ .|.|+|++ +|+...+.+.+|++++|++|++++.|++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvliv-sH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILV-THNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999865 47888776 4567788899999999999999999998
Q ss_pred hhHH
Q 000860 232 AEVL 235 (1250)
Q Consensus 232 ~~~~ 235 (1250)
+++.
T Consensus 230 ~~~~ 233 (287)
T PRK13641 230 KEIF 233 (287)
T ss_pred HHHh
Confidence 8764
No 456
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=1.1e-31 Score=295.11 Aligned_cols=187 Identities=27% Similarity=0.339 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (230)
T TIGR03410 28 VTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP 104 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC
Confidence 47999999999999999999999864 999999998875322 24579999999999998999999988643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhC-CccccccccCCCccccCccccchhhH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLG-LDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
.. . ....+++++.++ +.+..++.++ .||||||||++
T Consensus 105 ~~--~------------------------------------~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrv~ 141 (230)
T TIGR03410 105 RR--S------------------------------------RKIPDEIYELFPVLKEMLGRRGG-----DLSGGQQQQLA 141 (230)
T ss_pred cc--h------------------------------------HHHHHHHHHHHHhHHHHhhCChh-----hCCHHHHHHHH
Confidence 00 0 001244566665 4555555554 49999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
|||||+.+|++++|||||+|||+.++.++.+.|+++.++.++|+|++. |+..++.+.+|++++|++|++++.|+.+++
T Consensus 142 la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s-H~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 142 IARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVE-QYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEe-CCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 999999999999999999999999999999999998764477888775 446778789999999999999999998875
No 457
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=9.6e-33 Score=272.37 Aligned_cols=194 Identities=28% Similarity=0.384 Sum_probs=165.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+|+++|||||||||||.+++++++. .+|+|+++|.++... .+.+.++.+-|++..-..+||+|-+.||.--.
T Consensus 29 iTs~IGPNGAGKSTLLS~~sRL~~~---d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPY-- 103 (252)
T COG4604 29 ITSIIGPNGAGKSTLLSMMSRLLKK---DSGEITIDGLELTSTPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPY-- 103 (252)
T ss_pred eeEEECCCCccHHHHHHHHHHhccc---cCceEEEeeeecccCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcc--
Confidence 6899999999999999999999985 499999999998543 45677889999988888999999999973211
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
+. .++. .+.+..++++++.+.|++..|.... +||||||||.-||
T Consensus 104 --Sq---------------GRlt--------------~eD~~~I~~aieyl~L~~l~dryLd-----~LSGGQrQRAfIA 147 (252)
T COG4604 104 --SQ---------------GRLT--------------KEDRRIINEAIEYLHLEDLSDRYLD-----ELSGGQRQRAFIA 147 (252)
T ss_pred --cC---------------CCCc--------------hHHHHHHHHHHHHhcccchHHHhHH-----hcccchhhhhhhh
Confidence 00 0000 1112358889999999998886654 4999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
+.++.+.+.++||||.++||-..+.++++.|++++++.|+|+|+++| +.+.+..++|+|+.|.+|+++.+|+++++.+
T Consensus 148 MVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlH-DINfAS~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 148 MVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLH-DINFASCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEe-cccHHHhhhhheeeecCCEEEecCCHHHhcC
Confidence 99999999999999999999999999999999999999999999864 5788888999999999999999999999864
No 458
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.3e-31 Score=301.48 Aligned_cols=190 Identities=26% Similarity=0.355 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeecccc-ccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTD-NHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~-~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|+++... ..++.++|++|++ ..++..||.||+.++....+
T Consensus 35 ~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~ 111 (279)
T PRK13635 35 WVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIG 111 (279)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCC
Confidence 47999999999999999999999865 99999999987542 2356799999986 36777899999988653321
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ ...+++++++.+||.+..++.++. |||||||||+|
T Consensus 112 ~~~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LS~G~~qrv~l 151 (279)
T PRK13635 112 VPR-----------EE------------------------MVERVDQALRQVGMEDFLNREPHR-----LSGGQKQRVAI 151 (279)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHcCChhhhhCCccc-----CCHHHHHHHHH
Confidence 100 00 011367789999998888877764 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|||||||+|||+.++..+++.|++++++.++|+|++.|+ ..++. .+|++++|++|++++.|+.+++.
T Consensus 152 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~-~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 152 AGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHD-LDEAA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecC-HHHHH-cCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999999986557888887655 45554 59999999999999999988764
No 459
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.97 E-value=1.3e-31 Score=291.28 Aligned_cols=180 Identities=26% Similarity=0.365 Sum_probs=147.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+|++||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~ 105 (214)
T cd03292 29 FVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEV 105 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999864 99999999987532 2356799999999999999999999886543
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
++... .+ .+.+++++++.+||++..++.+++ ||||||||+
T Consensus 106 ~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv 145 (214)
T cd03292 106 TGVPP-----------RE------------------------IRKRVPAALELVGLSHKHRALPAE-----LSGGEQQRV 145 (214)
T ss_pred cCCCH-----------HH------------------------HHHHHHHHHHHcCCHHHhhCChhh-----cCHHHHHHH
Confidence 21100 00 001256788899998777776654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeE
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYL 225 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i 225 (1250)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.+ .++|+|++. |+...+.+.+|++++|++|++
T Consensus 146 ~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tiiivt-H~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 146 AIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AGTTVVVAT-HAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999999865 477877775 456777788999999999974
No 460
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.97 E-value=1.5e-31 Score=290.83 Aligned_cols=179 Identities=24% Similarity=0.374 Sum_probs=147.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (214)
T TIGR02673 30 FLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEV 106 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999864 99999999987532 2356799999999888899999999886543
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.... . .+.+++++++.+||.+..++.+.+ ||||||||+
T Consensus 107 ~~~~~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl 146 (214)
T TIGR02673 107 RGKKER-----------E------------------------IQRRVGAALRQVGLEHKADAFPEQ-----LSGGEQQRV 146 (214)
T ss_pred cCCCHH-----------H------------------------HHHHHHHHHHHcCChhhhhCChhh-----CCHHHHHHH
Confidence 211000 0 001256788999998766766654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCe
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGY 224 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~ 224 (1250)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++..++|++++|++|+
T Consensus 147 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~t-H~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 147 AIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVAT-HDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999999865 478887775 55678888999999999985
No 461
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.9e-31 Score=295.32 Aligned_cols=191 Identities=20% Similarity=0.362 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+......
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 107 (241)
T PRK10895 31 IVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD 107 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc
Confidence 47999999999999999999999864 999999999875322 34679999999888988999999987543211
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.. . ..+ .+..++++++.+||.+..+..++ .|||||||||+|
T Consensus 108 ~~-~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~l 148 (241)
T PRK10895 108 DL-S---------AEQ------------------------REDRANELMEEFHIEHLRDSMGQ-----SLSGGERRRVEI 148 (241)
T ss_pred cc-C---------HHH------------------------HHHHHHHHHHHcCCHHHhhcchh-----hCCHHHHHHHHH
Confidence 00 0 000 01125678889999876666654 499999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++.+.+|++++|++|++++.|+++++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~s-H~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 149 ARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITD-HNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEE-cCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 9999999999999999999999999999999999865 478888775 4567788899999999999999999988763
No 462
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.9e-31 Score=300.54 Aligned_cols=191 Identities=25% Similarity=0.382 Sum_probs=156.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccc-cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDN-HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++. .+...||.||+.++....+
T Consensus 32 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~ 108 (277)
T PRK13652 32 RIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLG 108 (277)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcC
Confidence 47999999999999999999999865 99999999987532 33567999999863 3446899999987643211
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ ....++++++.+||.+..++.+.. ||||||||++|
T Consensus 109 ~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Gq~qrl~l 148 (277)
T PRK13652 109 LDE-----------ET------------------------VAHRVSSALHMLGLEELRDRVPHH-----LSGGEKKRVAI 148 (277)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHCCChhHhcCCccc-----CCHHHHHHHHH
Confidence 100 00 001256789999998877777654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|||||||+|||+.++..+.+.|+++.++.+.|+|++. |+.+++.+.+|++++|++|++++.|+++++.
T Consensus 149 araL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~t-H~~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 149 AGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFST-HQLDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 99999999999999999999999999999999998765578888775 5567788899999999999999999998874
No 463
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.5e-31 Score=304.32 Aligned_cols=193 Identities=18% Similarity=0.219 Sum_probs=158.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeecccc--ccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTD--NHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~--~~~~~~TV~e~l~f~~ 72 (1250)
+++|+|+||||||||+++|+|+++|. +|+|.++|.++... ..++.++||+|++ .+.+.+||.+++....
T Consensus 43 ~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~ 119 (327)
T PRK11308 43 TLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPL 119 (327)
T ss_pred EEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHH
Confidence 47999999999999999999999864 99999999987532 2356799999986 5888899999997754
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
...... ...+ ...++.++|+.+||. ...++.+. +||||||
T Consensus 120 ~~~~~~----------~~~~------------------------~~~~~~~~l~~~gL~~~~~~~~p~-----~LSgGq~ 160 (327)
T PRK11308 120 LINTSL----------SAAE------------------------RREKALAMMAKVGLRPEHYDRYPH-----MFSGGQR 160 (327)
T ss_pred HHccCC----------CHHH------------------------HHHHHHHHHHHCCCChHHhcCCCc-----cCCHHHH
Confidence 332100 0000 012367889999996 35566554 4999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||+|||||+.+|++||+||||++||..++.++++.|+++.++.+.|+|++ +|+...+.+++|+|++|++|++++.|+.
T Consensus 161 QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~i-THdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 161 QRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFI-SHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999987667887776 4667777789999999999999999999
Q ss_pred hhHHH
Q 000860 232 AEVLE 236 (1250)
Q Consensus 232 ~~~~~ 236 (1250)
+++.+
T Consensus 240 ~~~~~ 244 (327)
T PRK11308 240 EQIFN 244 (327)
T ss_pred HHHhc
Confidence 88753
No 464
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.97 E-value=2.8e-31 Score=304.32 Aligned_cols=199 Identities=22% Similarity=0.258 Sum_probs=157.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------cc-ceEEeecccc--ccCCCCCHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------VQ-RASAYIGQTD--NHIAELTVRETLDFA 71 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~-~~~~yv~Q~~--~~~~~~TV~e~l~f~ 71 (1250)
+++|+|+||||||||+++|+|+++|....+|+|.++|.++.... .+ +.++||+|++ .+.+.+|+.+++.+.
T Consensus 44 ~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~ 123 (330)
T PRK09473 44 TLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 123 (330)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH
Confidence 47999999999999999999999863224999999999875421 12 4799999997 688899999999775
Q ss_pred HHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccc
Q 000860 72 ARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqk 151 (1250)
....... . ..+ ...++.++|+.+||++..+. . +...++||||||
T Consensus 124 ~~~~~~~-~---------~~~------------------------~~~~~~~~L~~vgL~~~~~~-~-~~~p~~LSgG~~ 167 (330)
T PRK09473 124 LMLHKGM-S---------KAE------------------------AFEESVRMLDAVKMPEARKR-M-KMYPHEFSGGMR 167 (330)
T ss_pred HHHhcCC-C---------HHH------------------------HHHHHHHHHHHcCCCChHHH-h-cCCcccCCHHHH
Confidence 4332100 0 000 01135677889999754322 2 234567999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||+|||||+.+|++||+||||+|||+.++.++++.|+++.++.+.|+|++ +|+...+.+++|+|++|++|++++.|+.
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~i-THdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMI-THDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-ECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999987667888776 4556777889999999999999999999
Q ss_pred hhHHH
Q 000860 232 AEVLE 236 (1250)
Q Consensus 232 ~~~~~ 236 (1250)
+++.+
T Consensus 247 ~~i~~ 251 (330)
T PRK09473 247 RDVFY 251 (330)
T ss_pred HHHHh
Confidence 98753
No 465
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=2.3e-31 Score=296.81 Aligned_cols=191 Identities=29% Similarity=0.467 Sum_probs=155.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||+++|+|+.+|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++......
T Consensus 30 ~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 106 (258)
T PRK13548 30 VVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGL 106 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCC
Confidence 47999999999999999999999864 99999999887432 2346799999998887889999999885421110
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
... + .+..++++++.+||.+..++.+++ |||||||||+||
T Consensus 107 ~~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgGe~qrv~la 146 (258)
T PRK13548 107 SRA-----------E------------------------DDALVAAALAQVDLAHLAGRDYPQ-----LSGGEQQRVQLA 146 (258)
T ss_pred CcH-----------H------------------------HHHHHHHHHHHcCCHhHhcCCccc-----CCHHHHHHHHHH
Confidence 000 0 011256788999998777777654 999999999999
Q ss_pred HHHh------cCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 158 EMIV------GPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 158 ~al~------~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||+ .+|++|+|||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+++|++++|++|++++.|++
T Consensus 147 ~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (258)
T PRK13548 147 RVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVL-HDLNLAARYADRIVLLHQGRLVADGTP 225 (258)
T ss_pred HHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEE-CCHHHHHHhcCEEEEEECCEEEeeCCH
Confidence 9999 599999999999999999999999999998744578887775 556778889999999999999999998
Q ss_pred hhHH
Q 000860 232 AEVL 235 (1250)
Q Consensus 232 ~~~~ 235 (1250)
+++.
T Consensus 226 ~~~~ 229 (258)
T PRK13548 226 AEVL 229 (258)
T ss_pred HHHh
Confidence 7764
No 466
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.97 E-value=2.3e-31 Score=291.01 Aligned_cols=183 Identities=28% Similarity=0.372 Sum_probs=152.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcccccceEEeeccccccCCCCCHHHHHHHHHHccCCCcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQVQRASAYIGQTDNHIAELTVRETLDFAARCQGANDS 80 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~~ 80 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .+.++|++|++.+++.+|++||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~~-- 101 (223)
T TIGR03740 28 VYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARENLKVHTTLLGLP-- 101 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999864 999999998875332 357999999988888899999998764322100
Q ss_pred hhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHHH
Q 000860 81 FAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEMI 160 (1250)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~al 160 (1250)
+..+.++++.+||.+..+..+++ ||||||||++||||+
T Consensus 102 -------------------------------------~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~~rv~laral 139 (223)
T TIGR03740 102 -------------------------------------DSRIDEVLNIVDLTNTGKKKAKQ-----FSLGMKQRLGIAIAL 139 (223)
T ss_pred -------------------------------------HHHHHHHHHHcCCcHHHhhhHhh-----CCHHHHHHHHHHHHH
Confidence 01245678889998777766654 999999999999999
Q ss_pred hcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhh
Q 000860 161 VGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAE 233 (1250)
Q Consensus 161 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~ 233 (1250)
+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.| +..++.+.+|++++|++|++++.|++.+
T Consensus 140 ~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH-~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 140 LNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSH-ILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred hcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcC-CHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 999999999999999999999999999999865 4778877754 4667788999999999999999998653
No 467
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.97 E-value=2.1e-31 Score=288.89 Aligned_cols=186 Identities=25% Similarity=0.346 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-cccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+..... ...
T Consensus 26 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~-~~~ 101 (213)
T TIGR01277 26 IVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPG-LKL 101 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhcc-CCc
Confidence 47999999999999999999999865 99999999987532 24567999999999998899999998753211 000
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
. .. .+.+++++++.+||.+..++.+.+ ||||||||++||||
T Consensus 102 ~---------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~lara 142 (213)
T TIGR01277 102 N---------AE-------------------------QQEKVVDAAQQVGIADYLDRLPEQ-----LSGGQRQRVALARC 142 (213)
T ss_pred c---------HH-------------------------HHHHHHHHHHHcCcHHHhhCCccc-----CCHHHHHHHHHHHH
Confidence 0 00 011256788999998777776654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
|+.+|++++|||||+|||+.++..+.+.|+++.++.+.|+|++. |+..++.+.+|++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vs-h~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVT-HHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHhhcCeEEEEECCeEEEecC
Confidence 99999999999999999999999999999998765577888764 45667778999999999999998874
No 468
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=4.9e-32 Score=262.59 Aligned_cols=191 Identities=21% Similarity=0.297 Sum_probs=154.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc----------------cccceEEeeccccccCCCCCH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF----------------QVQRASAYIGQTDNHIAELTV 64 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~~TV 64 (1250)
++.|+|.|||||||+|+||.=+..|+ .|.|.+||..+... .+|...+.|.|+..++..+||
T Consensus 34 VisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtv 110 (256)
T COG4598 34 VISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTV 110 (256)
T ss_pred EEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHH
Confidence 36899999999999999999888765 99999999876311 124567999999999999999
Q ss_pred HHHHHHHHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccc
Q 000860 65 RETLDFAARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLR 144 (1250)
Q Consensus 65 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 144 (1250)
.||+.-+.. + .....+.+ ..++.+..|+..||.+..|....
T Consensus 111 LeNViEaPv-h---------VLg~~k~e------------------------a~e~Ae~~L~kVGi~ek~~~YP~----- 151 (256)
T COG4598 111 LENVIEAPV-H---------VLGVSKAE------------------------AIERAEKYLAKVGIAEKADAYPA----- 151 (256)
T ss_pred HHHHHhcch-H---------hhcCCHHH------------------------HHHHHHHHHHHhCchhhhhcCcc-----
Confidence 999864321 0 00001100 11236678999999888876544
Q ss_pred cCccccchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCe
Q 000860 145 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGY 224 (1250)
Q Consensus 145 ~LSGGqkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~ 224 (1250)
.|||||+||++|||||+.+|+++++|||||+|||.-.-++++.+++++++ |+|.++++| .....-+...+|+.|.+|.
T Consensus 152 ~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeE-grTMv~VTH-EM~FAR~Vss~v~fLh~G~ 229 (256)
T COG4598 152 HLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEE-GRTMVVVTH-EMGFARDVSSHVIFLHQGK 229 (256)
T ss_pred ccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHh-CCeEEEEee-ehhHHHhhhhheEEeecce
Confidence 49999999999999999999999999999999999999999999999975 889888754 4666667889999999999
Q ss_pred EEeecChhhHH
Q 000860 225 LVYQGPRAEVL 235 (1250)
Q Consensus 225 i~~~G~~~~~~ 235 (1250)
|-++|+|+++.
T Consensus 230 iEE~G~P~qvf 240 (256)
T COG4598 230 IEEEGPPEQVF 240 (256)
T ss_pred ecccCChHHHh
Confidence 99999999874
No 469
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.97 E-value=2.7e-31 Score=294.98 Aligned_cols=192 Identities=23% Similarity=0.359 Sum_probs=153.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCeecCcc-----cccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGN--LNKSGSITYNGWELDEF-----QVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. .+.+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~ 107 (247)
T TIGR00972 29 VTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPR 107 (247)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHH
Confidence 47999999999999999999999752 11289999999987531 23567999999988888 999999988654
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc----cccccccCCCccccCccc
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD----LCSDTVVGSEMLRGVSGG 149 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGG 149 (1250)
.++.... .+ ....++.+++.+||. +..++.++ .||||
T Consensus 108 ~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~~-----~LSgG 148 (247)
T TIGR00972 108 LHGIKDK----------KE------------------------LDEIVEESLKKAALWDEVKDRLHDSAL-----GLSGG 148 (247)
T ss_pred hcCCCCH----------HH------------------------HHHHHHHHHHHcCCCcchhhHhhCCcc-----cCCHH
Confidence 3211000 00 001256778889997 55555554 49999
Q ss_pred cchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 150 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 150 qkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
||||++|||||+.+|+++||||||+|||+.++..+.+.|+++.+ ++|+|++. |+..++.+.+|++++|++|++++.|
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivs-H~~~~~~~~~d~i~~l~~G~i~~~~ 225 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVT-HNMQQAARISDRTAFFYDGELVEYG 225 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEe-cCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999865 36777764 5567788899999999999999999
Q ss_pred ChhhHH
Q 000860 230 PRAEVL 235 (1250)
Q Consensus 230 ~~~~~~ 235 (1250)
+++++.
T Consensus 226 ~~~~~~ 231 (247)
T TIGR00972 226 PTEQIF 231 (247)
T ss_pred CHHHHH
Confidence 988764
No 470
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.5e-31 Score=297.08 Aligned_cols=206 Identities=20% Similarity=0.291 Sum_probs=157.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .+..++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 109 (255)
T PRK11300 33 IVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQL 109 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccc
Confidence 47999999999999999999999864 999999999875422 23458999999999999999999998643110
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.. .. ....... ....... .+....+++.++.+||.+..++.+++ ||||||||++|
T Consensus 110 ~~-~~---~~~~~~~---~~~~~~~-------------~~~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv~l 164 (255)
T PRK11300 110 KT-GL---FSGLLKT---PAFRRAE-------------SEALDRAATWLERVGLLEHANRQAGN-----LAYGQQRRLEI 164 (255)
T ss_pred cc-hh---hhhhccc---cccccch-------------hHHHHHHHHHHHhCChhhhhhCChhh-----CCHHHHHHHHH
Confidence 00 00 0000000 0000000 00012356778999998777777654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |+..++.+.+|++++|++|++++.|+++++.
T Consensus 165 a~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~s-H~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 165 ARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIE-HDMKLVMGISDRIYVVNQGTPLANGTPEEIR 242 (255)
T ss_pred HHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEe-CCHHHHHHhCCEEEEEECCeEEecCCHHHHh
Confidence 99999999999999999999999999999999998765477888775 5567788899999999999999999988763
No 471
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2.2e-31 Score=285.48 Aligned_cols=166 Identities=44% Similarity=0.776 Sum_probs=140.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+++|+||||||||||+++|+|+++|..+.+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--- 111 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--- 111 (202)
T ss_pred EEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc---
Confidence 4799999999999999999999984334599999999987543 34567999999999999999999998753210
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.+..+ ..||||||||++|||
T Consensus 112 -------------------------------------------------------~~~~~-----~~LS~Ge~qrl~lar 131 (202)
T cd03233 112 -------------------------------------------------------GNEFV-----RGISGGERKRVSIAE 131 (202)
T ss_pred -------------------------------------------------------cccch-----hhCCHHHHHHHHHHH
Confidence 01222 349999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
||+.+|+++||||||+|||+.++..+.+.|+++.++.+.|+|+++||+.+++.+.+|++++|++|++++.|
T Consensus 132 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 132 ALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999876546788887788778899999999999999998764
No 472
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.5e-31 Score=297.48 Aligned_cols=190 Identities=21% Similarity=0.303 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccc-cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDN-HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++. +++..|+++|+.++....+
T Consensus 37 ~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~ 113 (269)
T PRK13648 37 WTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHA 113 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcC
Confidence 47999999999999999999999864 99999999987432 34567999999864 6788899999988643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
.... + ....++++++.+|+.+..++.++ .||||||||++|
T Consensus 114 ~~~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~l 153 (269)
T PRK13648 114 VPYD-----------E------------------------MHRRVSEALKQVDMLERADYEPN-----ALSGGQKQRVAI 153 (269)
T ss_pred CCHH-----------H------------------------HHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHH
Confidence 1000 0 00125678899999877776654 499999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||++.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++.|+ ..++.. +|++++|++|++++.|+++++.
T Consensus 154 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~-~~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 154 AGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHD-LSEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-chHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999876557888887655 455654 9999999999999999988764
No 473
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.7e-31 Score=294.87 Aligned_cols=188 Identities=23% Similarity=0.396 Sum_probs=151.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++..||+||+.++....
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~- 108 (237)
T PRK11614 33 IVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA- 108 (237)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-
Confidence 47999999999999999999999864 999999999875432 3467999999998999899999998753211
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHh-CCccccccccCCCccccCccccchhhH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVL-GLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
... .. +..++++++.+ ++.+..++.+. .||||||||++
T Consensus 109 -~~~------~~-----------------------------~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrl~ 147 (237)
T PRK11614 109 -ERD------QF-----------------------------QERIKWVYELFPRLHERRIQRAG-----TMSGGEQQMLA 147 (237)
T ss_pred -Chh------HH-----------------------------HHHHHHHHHHHHHHHHHHhCchh-----hCCHHHHHHHH
Confidence 000 00 00134455666 46555555443 49999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++.+.+|++++|++|++++.|+++++.
T Consensus 148 la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 148 IGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMTIFLVE-QNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 99999999999999999999999999999999999875 478888764 5567788999999999999999999988764
No 474
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.97 E-value=3.7e-31 Score=294.89 Aligned_cols=191 Identities=26% Similarity=0.355 Sum_probs=156.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc----------------cccceEEeeccccccCCCCCH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF----------------QVQRASAYIGQTDNHIAELTV 64 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~~~yv~Q~~~~~~~~TV 64 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++..||
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 104 (252)
T TIGR03005 28 KVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTV 104 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccCCCCcH
Confidence 47999999999999999999999864 99999999887421 235679999999999999999
Q ss_pred HHHHHHHHHc-cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCcc
Q 000860 65 RETLDFAARC-QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEML 143 (1250)
Q Consensus 65 ~e~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 143 (1250)
.||+.++... .+.. ..+ ....++++++.+|+.+..+..+.
T Consensus 105 ~~nl~~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~---- 145 (252)
T TIGR03005 105 LDNVTEAPVLVLGMA-----------RAE------------------------AEKRAMELLDMVGLADKADHMPA---- 145 (252)
T ss_pred HHHHHHHHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCChhHhhcChh----
Confidence 9999875321 1100 000 00125678889999877666554
Q ss_pred ccCccccchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCC
Q 000860 144 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDG 223 (1250)
Q Consensus 144 ~~LSGGqkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G 223 (1250)
.||||||||++|||||+.+|+++||||||+|||+.++..+.+.|+++.++.+.|+|++. |+..++.+++|++++|++|
T Consensus 146 -~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivs-H~~~~~~~~~d~i~~l~~G 223 (252)
T TIGR03005 146 -QLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVT-HEMGFAREFADRVCFFDKG 223 (252)
T ss_pred -hcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-CCHHHHHHhcCEEEEEECC
Confidence 49999999999999999999999999999999999999999999998765577888775 4567777899999999999
Q ss_pred eEEeecChhhHH
Q 000860 224 YLVYQGPRAEVL 235 (1250)
Q Consensus 224 ~i~~~G~~~~~~ 235 (1250)
++++.|+++++.
T Consensus 224 ~i~~~g~~~~~~ 235 (252)
T TIGR03005 224 RIVEQGKPDEIF 235 (252)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 475
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=1.2e-31 Score=333.82 Aligned_cols=193 Identities=25% Similarity=0.396 Sum_probs=153.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
.+||+|||||||||++++|+|+++|. +|+|.+||.|+++. .+|+.++||+|++.+|. .||+|||.++..- .
T Consensus 357 ~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~--a 430 (567)
T COG1132 357 KVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRPD--A 430 (567)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCCC--C
Confidence 37999999999999999999999965 99999999998654 46889999999977776 8999999986321 0
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
.. +++.+..+. . ..++.++ .+++++||.||+++ ..||||||||++||
T Consensus 431 --t~----eei~~a~k~------------------a------~~~d~I~--~lp~g~dt~vge~G-~~LSgGQrQrlaiA 477 (567)
T COG1132 431 --TD----EEIEEALKL------------------A------NAHEFIA--NLPDGYDTIVGERG-VNLSGGQRQRLAIA 477 (567)
T ss_pred --CH----HHHHHHHHH------------------h------ChHHHHH--hCcccccceecCCC-ccCCHHHHHHHHHH
Confidence 00 111111100 0 0122233 34778999999654 45999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||++++|+||+||||||+||+.++..|.+.++++.+ ++|++++.|+ . ...+.+|+|++|++|++++.|+++++.+
T Consensus 478 Rall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~iiIaHR-l-sti~~aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 478 RALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLIIAHR-L-STIKNADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred HHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEEEecc-H-hHHHhCCEEEEEECCEEEEecCHHHHHH
Confidence 999999999999999999999999999999998763 5677775443 3 5556699999999999999999999875
No 476
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=2e-31 Score=298.58 Aligned_cols=201 Identities=24% Similarity=0.347 Sum_probs=157.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc--------cccceEEeeccccccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF--------QVQRASAYIGQTDNHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~--------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~ 72 (1250)
+++|+||||||||||+++|+|+++|....+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++.
T Consensus 32 ~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~ 111 (262)
T PRK09984 32 MVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGA 111 (262)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhh
Confidence 4799999999999999999999986423469999999887421 22457999999988899899999998753
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccch
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKK 152 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkq 152 (1250)
... .......... ..+ ..+.+++++++.+||.+..+..++. |||||||
T Consensus 112 ~~~---~~~~~~~~~~----------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~q 159 (262)
T PRK09984 112 LGS---TPFWRTCFSW----------FTR--------------EQKQRALQALTRVGMVHFAHQRVST-----LSGGQQQ 159 (262)
T ss_pred ccc---ccchhhhccc----------ccH--------------HHHHHHHHHHHHcCCHHHHhCCccc-----cCHHHHH
Confidence 210 0000000000 000 0012367789999998777777654 9999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChh
Q 000860 153 RVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRA 232 (1250)
Q Consensus 153 Rv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~ 232 (1250)
||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.|+|+|++. |+...+.+.+|++++|++|++++.|+++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~t-H~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 160 RVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTL-HQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999765577888775 4566788899999999999999999987
Q ss_pred hH
Q 000860 233 EV 234 (1250)
Q Consensus 233 ~~ 234 (1250)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 64
No 477
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=3.9e-31 Score=296.36 Aligned_cols=191 Identities=22% Similarity=0.311 Sum_probs=154.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------ccceEEeecccc--ccCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------VQRASAYIGQTD--NHIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~~~yv~Q~~--~~~~~~TV~e~l~f~~ 72 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++ .+++.+||+||+.+..
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 115 (265)
T TIGR02769 39 TVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPL 115 (265)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999864 999999999875321 356799999986 4667899999997754
Q ss_pred Hcc-CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCcccc
Q 000860 73 RCQ-GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQ 150 (1250)
Q Consensus 73 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGq 150 (1250)
... ... ..+ .+.+++++++.+||. +..+..++ +|||||
T Consensus 116 ~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----~LSgGe 155 (265)
T TIGR02769 116 RHLTSLD-----------ESE------------------------QKARIAELLDMVGLRSEDADKLPR-----QLSGGQ 155 (265)
T ss_pred HHhcCCC-----------HHH------------------------HHHHHHHHHHHcCCChhhhhCChh-----hCCHHH
Confidence 211 000 000 011356788999995 55666654 499999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 151 KKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 151 kqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |+...+.+++|++++|++|++++.|+
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivs-H~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFIT-HDLRLVQSFCQRVAVMDKGQIVEECD 234 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-CCHHHHHHHhcEEEEEeCCEEEEECC
Confidence 99999999999999999999999999999999999999998765578887774 55677778999999999999999999
Q ss_pred hhhHH
Q 000860 231 RAEVL 235 (1250)
Q Consensus 231 ~~~~~ 235 (1250)
++++.
T Consensus 235 ~~~~~ 239 (265)
T TIGR02769 235 VAQLL 239 (265)
T ss_pred HHHHc
Confidence 98864
No 478
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=99.97 E-value=5e-31 Score=325.84 Aligned_cols=206 Identities=27% Similarity=0.362 Sum_probs=165.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEEECCccC
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 728 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~~~~~G~i~~~g~~~ 728 (1250)
.++++|++++++. ++++|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 4 ~i~~~nls~~~~~------------~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 67 (552)
T TIGR03719 4 IYTMNRVSKVVPP------------KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDK--EFNGEARPAPG-- 67 (552)
T ss_pred EEEEeeEEEecCC------------CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEecCC--
Confidence 5899999998741 2468999999999999999999999999999999999876 35799998752
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHHhc-C-----------CCCCCCHH---------------------HHHH
Q 000860 729 EQSTFARISGYVEQEDVHSPQVTIEESLWFSANL-R-----------LPKEISKD---------------------QRHE 775 (1250)
Q Consensus 729 ~~~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l-~-----------~~~~~~~~---------------------~~~~ 775 (1250)
..+|||+|++.+++.+||+|++.+.... + .......+ ....
T Consensus 68 ------~~i~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (552)
T TIGR03719 68 ------IKVGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDR 141 (552)
T ss_pred ------CEEEEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHH
Confidence 4589999999888999999999874210 0 00000010 0124
Q ss_pred HHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhhCCCEEE
Q 000860 776 FVEEVMSLVELDSLRHALVGSPGSFGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVV 855 (1250)
Q Consensus 776 ~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 855 (1250)
+++++++.+++.. .++.++ .||||||||++|||+|+.+|++|+|||||++||+.++..+.+.|+++ +.|||
T Consensus 142 ~~~~~l~~~~l~~-~~~~~~-----~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~---~~tvI 212 (552)
T TIGR03719 142 KLEIAMDALRCPP-WDADVT-----KLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY---PGTVV 212 (552)
T ss_pred HHHHHHhhCCCCc-ccCchh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC---CCeEE
Confidence 5667777888853 455554 49999999999999999999999999999999999999999999876 35999
Q ss_pred EEecCCCHHHHHhhcceeeeecCcEE-EEeCCC
Q 000860 856 CTIHQPSIEIFEAFDELLLMKRGGRV-IYGGKL 887 (1250)
Q Consensus 856 ~~~H~~~~~~~~~~d~v~~l~~gg~~-~~~g~~ 887 (1250)
+++|++. .+...+|++++|.+ |++ .+.|+.
T Consensus 213 iisHd~~-~~~~~~d~v~~l~~-g~i~~~~g~~ 243 (552)
T TIGR03719 213 AVTHDRY-FLDNVAGWILELDR-GRGIPWEGNY 243 (552)
T ss_pred EEeCCHH-HHHhhcCeEEEEEC-CEEEEecCCH
Confidence 9999975 57778999999986 564 477775
No 479
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2e-31 Score=294.47 Aligned_cols=186 Identities=23% Similarity=0.407 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
+++|+||||||||||+++|+|+.+|. +|+|.++|.++... ..++.++|++|++.+++ .||+||+.++....+
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~- 105 (241)
T PRK14250 31 IYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKG- 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhcC-
Confidence 47999999999999999999999864 99999999887432 33567999999987776 699999976432110
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccchhhHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
. . +.+++++++.+||+ +..++.+. .||||||||++|
T Consensus 106 --~--------~----------------------------~~~~~~~l~~~~l~~~~~~~~~~-----~LS~G~~qrl~l 142 (241)
T PRK14250 106 --E--------K----------------------------NVDVEYYLSIVGLNKEYATRDVK-----NLSGGEAQRVSI 142 (241)
T ss_pred --c--------H----------------------------HHHHHHHHHHcCCCHHHhhCCcc-----cCCHHHHHHHHH
Confidence 0 0 01245678888996 44555444 499999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|+++||||||+|||+.++..+.+.|+++.++.|+|+|++. |+..++.+.+|+|++|++|+++..|+++++.
T Consensus 143 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~s-H~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 143 ARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWIT-HNMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEe-ccHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998764578887764 5567788899999999999999999988763
No 480
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=4.1e-31 Score=290.88 Aligned_cols=191 Identities=26% Similarity=0.415 Sum_probs=157.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc-ccceEEeeccccccCCCCCHHHHHHHHHHccCCCc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ-VQRASAYIGQTDNHIAELTVRETLDFAARCQGAND 79 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~~ 79 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++....+...
T Consensus 27 ~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~ 103 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVDK 103 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCCH
Confidence 47999999999999999999999865 999999999875422 35679999999888989999999987643221100
Q ss_pred chhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHHH
Q 000860 80 SFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGEM 159 (1250)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~a 159 (1250)
.+ . ...+.++++.+||.+..++.+.+ ||||||||++||||
T Consensus 104 -----------~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~lara 143 (235)
T cd03299 104 -----------KE----------I--------------ERKVLEIAEMLGIDHLLNRKPET-----LSGGEQQRVAIARA 143 (235)
T ss_pred -----------HH----------H--------------HHHHHHHHHHcCChhHHhcCccc-----CCHHHHHHHHHHHH
Confidence 00 0 01245678889998877777654 99999999999999
Q ss_pred HhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 160 IVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 160 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|+.+|++++|||||+|||+.++..+++.|++++++.++|+|++.|+ ..++.+.+|++++|++|++++.|+++++.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~-~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHD-FEEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999999876557888887554 56778899999999999999999987764
No 481
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.4e-31 Score=298.85 Aligned_cols=191 Identities=22% Similarity=0.341 Sum_probs=155.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc----cccceEEeeccccc-cCCCCCHHHHHHHHHHcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF----QVQRASAYIGQTDN-HIAELTVRETLDFAARCQ 75 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~ 75 (1250)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++. .+...||.||+.|+....
T Consensus 38 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~ 114 (280)
T PRK13633 38 FLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL 114 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc
Confidence 47999999999999999999999865 99999999987532 24677999999863 333569999998875322
Q ss_pred CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhH
Q 000860 76 GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
+... .+ .+.+++++++.+||.+..++.++. ||||||||++
T Consensus 115 ~~~~-----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~-----LS~G~~qrv~ 154 (280)
T PRK13633 115 GIPP-----------EE------------------------IRERVDESLKKVGMYEYRRHAPHL-----LSGGQKQRVA 154 (280)
T ss_pred CCCH-----------HH------------------------HHHHHHHHHHHCCCHhHhhCCccc-----CCHHHHHHHH
Confidence 1110 00 011367789999998888887754 9999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|+++||||||+|||+.++..+.+.|+++.++.+.|+|++.|+ ..++.. +|++++|++|++++.|+++++.
T Consensus 155 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~-~~~~~~-~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 155 IAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHY-MEEAVE-ADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-hHHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999999876557888887555 455554 9999999999999999998875
Q ss_pred H
Q 000860 236 E 236 (1250)
Q Consensus 236 ~ 236 (1250)
.
T Consensus 233 ~ 233 (280)
T PRK13633 233 K 233 (280)
T ss_pred c
Confidence 3
No 482
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=2.2e-31 Score=288.74 Aligned_cols=179 Identities=28% Similarity=0.433 Sum_probs=144.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccc-cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDN-HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++. .++.+||+||+.++....+
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~ 105 (211)
T cd03225 29 FVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLG 105 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcC
Confidence 47999999999999999999999864 99999999887532 23567999999864 4667899999987643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ .+..++++++.+||.+..++.++. |||||||||+|
T Consensus 106 ~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrv~l 145 (211)
T cd03225 106 LPE-----------EE------------------------IEERVEEALELVGLEGLRDRSPFT-----LSGGQKQRVAI 145 (211)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHcCcHhhhcCCccc-----CCHHHHHHHHH
Confidence 100 00 001256788899998777776654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCe
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGY 224 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~ 224 (1250)
||||+.+|++++|||||+|||+.++..+.+.|++++++ ++|+|++. |+..++..++|++++|++|+
T Consensus 146 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~s-H~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 146 AGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVT-HDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEe-CCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999999999998764 77887775 45677778899999999985
No 483
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.4e-31 Score=297.87 Aligned_cols=190 Identities=26% Similarity=0.397 Sum_probs=153.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc--c---cccceEEeeccccc-cCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE--F---QVQRASAYIGQTDN-HIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~--~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.. . ..++.++|++|++. .+...|+.||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~ 105 (271)
T PRK13638 29 VTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRN 105 (271)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHH
Confidence 47999999999999999999999865 9999999998741 1 23567999999864 24456899999886432
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+.... + ....++++++.+||.+..++.++. ||||||||+
T Consensus 106 ~~~~~~-----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG~~qrl 145 (271)
T PRK13638 106 LGVPEA-----------E------------------------ITRRVDEALTLVDAQHFRHQPIQC-----LSHGQKKRV 145 (271)
T ss_pred cCCCHH-----------H------------------------HHHHHHHHHHHcCCHhHhcCCchh-----CCHHHHHHH
Confidence 211000 0 001256788899998777776654 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhH
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEV 234 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~ 234 (1250)
+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++. |+..++.+++|++++|++|++++.|+++++
T Consensus 146 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~vt-H~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (271)
T PRK13638 146 AIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIISS-HDIDLIYEISDAVYVLRQGQILTHGAPGEV 223 (271)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999875 477877764 556778889999999999999999998876
Q ss_pred H
Q 000860 235 L 235 (1250)
Q Consensus 235 ~ 235 (1250)
.
T Consensus 224 ~ 224 (271)
T PRK13638 224 F 224 (271)
T ss_pred h
Confidence 4
No 484
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.6e-31 Score=298.64 Aligned_cols=189 Identities=23% Similarity=0.354 Sum_probs=154.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc----cccceEEeeccccc-cCCCCCHHHHHHHHHHcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF----QVQRASAYIGQTDN-HIAELTVRETLDFAARCQ 75 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~----~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~ 75 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++. .+...||.||+.++....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~ 106 (274)
T PRK13644 30 YIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL 106 (274)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc
Confidence 47999999999999999999999864 99999999987532 23567999999864 466789999998865322
Q ss_pred CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhH
Q 000860 76 GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVT 155 (1250)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ 155 (1250)
+... .+ ..+.++++++.+||.+..++.++. ||||||||++
T Consensus 107 ~~~~-----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS~G~~qrv~ 146 (274)
T PRK13644 107 CLPP-----------IE------------------------IRKRVDRALAEIGLEKYRHRSPKT-----LSGGQGQCVA 146 (274)
T ss_pred CCCH-----------HH------------------------HHHHHHHHHHHCCCHHHhcCCccc-----CCHHHHHHHH
Confidence 1100 00 011256788999998877777654 9999999999
Q ss_pred HHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 156 TGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 156 iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
|||||+.+|+++||||||+|||+.++..+++.|+++.+ .|.|+|++.|+ ..++ ..+|++++|++|++++.|+++++.
T Consensus 147 laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~-~~~~-~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 147 LAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHN-LEEL-HDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecC-HHHH-hhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999875 47888887554 5555 569999999999999999988764
No 485
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3e-31 Score=298.09 Aligned_cols=190 Identities=25% Similarity=0.339 Sum_probs=154.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccc-cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDN-HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+.+|. +|+|.++|.++... ..++.++|++|++. .++.+||+||+.++....+
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~ 113 (271)
T PRK13632 37 YVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKK 113 (271)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcC
Confidence 47999999999999999999999864 99999999987532 34667999999863 6778899999988643211
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ .+..++++++.+||.+..++.++. ||||||||++|
T Consensus 114 ~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrl~l 153 (271)
T PRK13632 114 VPP-----------KK------------------------MKDIIDDLAKKVGMEDYLDKEPQN-----LSGGQKQRVAI 153 (271)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHcCCHHHhhCCccc-----CCHHHHHHHHH
Confidence 100 00 011256788999998877777654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|+|||||+|||+.++..+++.|+++.++.++|+|++.|++ .++ ..+|++++|++|++++.|+.+++.
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~-~~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDM-DEA-ILADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEech-hHH-hhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999998765457888876654 445 479999999999999999987754
No 486
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=2.7e-31 Score=255.90 Aligned_cols=181 Identities=27% Similarity=0.374 Sum_probs=153.7
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------c-cceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------V-QRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
++|||||||||||||-+++|+..|+ +|+|.+.|+++.... . .+.+|+|+|-..++|++|..||+...+.+
T Consensus 39 vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL 115 (228)
T COG4181 39 VAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLEL 115 (228)
T ss_pred EEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhh
Confidence 6999999999999999999999865 999999999885432 2 46799999999999999999999988777
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
++-.... ........|+.+||.+..+...+ +|||||+|||
T Consensus 116 ~ge~~~~-----------------------------------~~~~A~~lL~~vGLg~Rl~HyP~-----qLSGGEQQRV 155 (228)
T COG4181 116 RGESSAD-----------------------------------SRAGAKALLEAVGLGKRLTHYPA-----QLSGGEQQRV 155 (228)
T ss_pred cCCcccc-----------------------------------HHHHHHHHHHHhCcccccccCcc-----ccCchHHHHH
Confidence 6521110 01124567899999887776654 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEe
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVY 227 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~ 227 (1250)
+||||+...|+||+-||||-+||..+..+|.+.|-.+.++.|.|.|+++|.+ ....-|||.+-|.+|+++.
T Consensus 156 AiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~--~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 156 ALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDP--QLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCH--HHHHhhhheeeeecceecc
Confidence 9999999999999999999999999999999999999888899988886654 5667899999999999875
No 487
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=1.4e-31 Score=335.13 Aligned_cols=193 Identities=25% Similarity=0.390 Sum_probs=152.8
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
++|+||||||||||+++|+|+++|. +|+|.+||.++++. ..++.++||||++.+|+ .|++|||.++.. ..
T Consensus 372 ~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~---~~ 444 (582)
T PRK11176 372 VALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYART---EQ 444 (582)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-chHHHHHhcCCC---CC
Confidence 7999999999999999999999975 99999999998653 35788999999987776 699999987521 00
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
.+. .++.... +.+ -.++.++ .|++..||.+|+++ +.||||||||++|||
T Consensus 445 ~~~----~~i~~al---------------~~~---------~l~~~i~--~lp~Gldt~ig~~g-~~LSGGqrQRi~LAR 493 (582)
T PRK11176 445 YSR----EQIEEAA---------------RMA---------YAMDFIN--KMDNGLDTVIGENG-VLLSGGQRQRIAIAR 493 (582)
T ss_pred CCH----HHHHHHH---------------HHh---------CcHHHHH--hcccccCceeCCCC-CcCCHHHHHHHHHHH
Confidence 010 0000000 000 0111222 26678899999764 569999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|+||+||||||+||+.++..+.+.|+++.+ ++|+|++.|++ +..+.||+|++|++|++++.|+++++.+
T Consensus 494 all~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~VtHr~--~~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 494 ALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHRL--STIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred HHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999998743 68888876654 6778899999999999999999999864
No 488
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.1e-31 Score=293.52 Aligned_cols=194 Identities=25% Similarity=0.330 Sum_probs=153.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHcc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGN--LNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQ 75 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~--~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~ 75 (1250)
+++|+||||||||||+++|+|+++|. .+.+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~ 110 (250)
T PRK14247 31 ITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLN 110 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhc
Confidence 47999999999999999999998741 13599999999987432 34567999999988888999999998865322
Q ss_pred CCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcc----ccccccCCCccccCccccc
Q 000860 76 GANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDL----CSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~~t~vg~~~~~~LSGGqk 151 (1250)
...... .+ ..+.++++++.+||.+ ..++.+ .+||||||
T Consensus 111 ~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LSgG~~ 152 (250)
T PRK14247 111 RLVKSK---------KE------------------------LQERVRWALEKAQLWDEVKDRLDAPA-----GKLSGGQQ 152 (250)
T ss_pred cccCCH---------HH------------------------HHHHHHHHHHHcCCCcchhhhhcCCc-----ccCCHHHH
Confidence 110000 00 0112567788888853 345544 44999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
|||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++. |+..++.+.+|++++|++|++++.|++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--DMTIVLVT-HFPQQAARISDYVAFLYKGQIVEWGPT 229 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEe-CCHHHHHHhcCEEEEEECCeEEEECCH
Confidence 999999999999999999999999999999999999999853 67777764 556677789999999999999999998
Q ss_pred hhHH
Q 000860 232 AEVL 235 (1250)
Q Consensus 232 ~~~~ 235 (1250)
+++.
T Consensus 230 ~~~~ 233 (250)
T PRK14247 230 REVF 233 (250)
T ss_pred HHHH
Confidence 8764
No 489
>PRK10908 cell division protein FtsE; Provisional
Probab=99.97 E-value=3.6e-31 Score=289.21 Aligned_cols=181 Identities=25% Similarity=0.315 Sum_probs=147.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc------cccceEEeeccccccCCCCCHHHHHHHHHHc
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF------QVQRASAYIGQTDNHIAELTVRETLDFAARC 74 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~------~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~ 74 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++.+++..|++||+.+....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (222)
T PRK10908 30 MAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLII 106 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHh
Confidence 47999999999999999999999864 99999999987532 1356799999998888899999999886533
Q ss_pred cCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhh
Q 000860 75 QGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRV 154 (1250)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv 154 (1250)
.+... .+ ....++++++.+||.+..++.+++ ||||||||+
T Consensus 107 ~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~~qrv 146 (222)
T PRK10908 107 AGASG-----------DD------------------------IRRRVSAALDKVGLLDKAKNFPIQ-----LSGGEQQRV 146 (222)
T ss_pred cCCCH-----------HH------------------------HHHHHHHHHHHcCChhhhhCCchh-----CCHHHHHHH
Confidence 21110 00 001245678889998766766544 999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEE
Q 000860 155 TTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLV 226 (1250)
Q Consensus 155 ~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~ 226 (1250)
+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ +.|+|++ +|+..++...+|++++|++|+++
T Consensus 147 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~-sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 147 GIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV-GVTVLMA-THDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-CCEEEEE-eCCHHHHHHhCCEEEEEECCEEc
Confidence 9999999999999999999999999999999999998654 6777776 45567788889999999999975
No 490
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.4e-31 Score=297.96 Aligned_cols=190 Identities=22% Similarity=0.299 Sum_probs=151.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc-------cccceEEeeccccc-cCCCCCHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF-------QVQRASAYIGQTDN-HIAELTVRETLDFAA 72 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~ 72 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++... ..++.++|++|++. .+...||+||+.++.
T Consensus 35 ~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~ 111 (280)
T PRK13649 35 YTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGP 111 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHH
Confidence 47999999999999999999999864 99999999987431 23567999999852 333479999998864
Q ss_pred HccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCccccc
Q 000860 73 RCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQK 151 (1250)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqk 151 (1250)
...+... .+ ....++++++.+||. ...+..++ .||||||
T Consensus 112 ~~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~ 151 (280)
T PRK13649 112 QNFGVSQ-----------EE------------------------AEALAREKLALVGISESLFEKNPF-----ELSGGQM 151 (280)
T ss_pred HHcCCCH-----------HH------------------------HHHHHHHHHHHcCCChhhhhCCcc-----cCCHHHH
Confidence 3221100 00 001256678889996 34566554 4999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecCh
Q 000860 152 KRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPR 231 (1250)
Q Consensus 152 qRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~ 231 (1250)
||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++.| +..++.+.+|++++|++|++++.|++
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH-~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTH-LMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEec-cHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999875 4788887754 46677789999999999999999998
Q ss_pred hhHH
Q 000860 232 AEVL 235 (1250)
Q Consensus 232 ~~~~ 235 (1250)
+++.
T Consensus 230 ~~~~ 233 (280)
T PRK13649 230 KDIF 233 (280)
T ss_pred HHHh
Confidence 8764
No 491
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.97 E-value=5.1e-31 Score=289.43 Aligned_cols=183 Identities=27% Similarity=0.360 Sum_probs=148.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc------c-cceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ------V-QRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~------~-~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.... . ++.++|++|++.+++.+||.||+.++..
T Consensus 38 ~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~ 114 (228)
T PRK10584 38 TIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPAL 114 (228)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHH
Confidence 47999999999999999999999864 999999999875322 1 2569999999888898999999987643
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchh
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKR 153 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqR 153 (1250)
.++... .+ .+.+++++++.+||.+..+..+.+ ||||||||
T Consensus 115 ~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Ge~qr 154 (228)
T PRK10584 115 LRGESS-----------RQ------------------------SRNGAKALLEQLGLGKRLDHLPAQ-----LSGGEQQR 154 (228)
T ss_pred hcCCCH-----------HH------------------------HHHHHHHHHHHcCCHhHhhCChhh-----CCHHHHHH
Confidence 221100 00 011256788999998777776654 99999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEee
Q 000860 154 VTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQ 228 (1250)
Q Consensus 154 v~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~ 228 (1250)
++|||||+.+|++|||||||+|||+.++..+.+.|++++++.++|+|++.|+ ...+ ..+|++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~-~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHD-LQLA-ARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHH-HhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999999876557888887555 4455 56999999999998753
No 492
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=2.5e-31 Score=332.97 Aligned_cols=192 Identities=22% Similarity=0.285 Sum_probs=153.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGA 77 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~ 77 (1250)
.++|+|+||||||||+++|+|+++|. +|+|.+||.++++. ..++.++||||++.+|+. |++|||.++. ..
T Consensus 369 ~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~---~~ 441 (592)
T PRK10790 369 FVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR---DI 441 (592)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC---CC
Confidence 37999999999999999999999975 99999999988643 467899999999888875 9999998852 11
Q ss_pred CcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHH
Q 000860 78 NDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTG 157 (1250)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA 157 (1250)
. . .++.+. .+.+ -.++.++. |++..||.+|+.+ ..||||||||++||
T Consensus 442 ~--d----~~i~~a---------------~~~~---------gl~~~i~~--lp~Gldt~i~e~g-~~LSGGqrQRialA 488 (592)
T PRK10790 442 S--E----EQVWQA---------------LETV---------QLAELARS--LPDGLYTPLGEQG-NNLSVGQKQLLALA 488 (592)
T ss_pred C--H----HHHHHH---------------HHHc---------CcHHHHHh--ccccccccccCCC-CCCCHHHHHHHHHH
Confidence 1 0 000000 0000 01122222 5677899999854 55999999999999
Q ss_pred HHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 158 EMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 158 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
|||+++|+|++||||||+||+.++.++.+.|+++.+ ++|+|++.|++ +..+.+|+|++|++|++++.|+++++.+
T Consensus 489 RaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 489 RVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999999998753 58888876654 6677899999999999999999999864
No 493
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.97 E-value=5.8e-31 Score=294.02 Aligned_cols=190 Identities=21% Similarity=0.258 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc----------------ccccceEEeeccccccCCCCCH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE----------------FQVQRASAYIGQTDNHIAELTV 64 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~----------------~~~~~~~~yv~Q~~~~~~~~TV 64 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.. ...++.++|++|++.+++.+||
T Consensus 33 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv 109 (257)
T PRK10619 33 VISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTV 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcH
Confidence 47999999999999999999999864 9999999987642 1235679999999999999999
Q ss_pred HHHHHHHHH-ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcccc-ccccCCCc
Q 000860 65 RETLDFAAR-CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCS-DTVVGSEM 142 (1250)
Q Consensus 65 ~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-~t~vg~~~ 142 (1250)
+||+.++.. ..... ..+ .+.++.++++.+||.+.. +..+
T Consensus 110 ~enl~~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~---- 150 (257)
T PRK10619 110 LENVMEAPIQVLGLS-----------KQE------------------------ARERAVKYLAKVGIDERAQGKYP---- 150 (257)
T ss_pred HHHHHHHHHHhCCCC-----------HHH------------------------HHHHHHHHHHHcCCChhhhhCCc----
Confidence 999987532 11100 000 011256788999997653 5444
Q ss_pred cccCccccchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecC
Q 000860 143 LRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSD 222 (1250)
Q Consensus 143 ~~~LSGGqkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~ 222 (1250)
++||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|+|++. |+..++..++|++++|++
T Consensus 151 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivs-H~~~~~~~~~d~i~~l~~ 227 (257)
T PRK10619 151 -VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVT-HEMGFARHVSSHVIFLHQ 227 (257)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEe-CCHHHHHHhcCEEEEEEC
Confidence 45999999999999999999999999999999999999999999999875 478888774 456677778999999999
Q ss_pred CeEEeecChhhHH
Q 000860 223 GYLVYQGPRAEVL 235 (1250)
Q Consensus 223 G~i~~~G~~~~~~ 235 (1250)
|++++.|+++++.
T Consensus 228 G~i~~~~~~~~~~ 240 (257)
T PRK10619 228 GKIEEEGAPEQLF 240 (257)
T ss_pred CEEEEeCCHHHhh
Confidence 9999999988764
No 494
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.5e-31 Score=301.68 Aligned_cols=196 Identities=21% Similarity=0.242 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC-ceeeEEEECCeecCccc---c----cceEEeecccc--ccCCCCCHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNL-NKSGSITYNGWELDEFQ---V----QRASAYIGQTD--NHIAELTVRETLDF 70 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~-~~~G~v~~~g~~~~~~~---~----~~~~~yv~Q~~--~~~~~~TV~e~l~f 70 (1250)
+++|+||||||||||+++|+|++++.. +.+|+|.++|.++.... . ++.++||+|++ .+.+.+||.+++..
T Consensus 35 ~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~ 114 (326)
T PRK11022 35 VVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIME 114 (326)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHH
Confidence 479999999999999999999987421 36999999999875331 1 23699999986 57888999999876
Q ss_pred HHHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcc---ccccccCCCccccCc
Q 000860 71 AARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDL---CSDTVVGSEMLRGVS 147 (1250)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~vg~~~~~~LS 147 (1250)
......... ..+ .+.++.++|+.+||.+ ..+.. .++||
T Consensus 115 ~l~~~~~~~----------~~~------------------------~~~~~~~~L~~~gL~~~~~~l~~~-----p~~LS 155 (326)
T PRK11022 115 AIKVHQGGN----------KKT------------------------RRQRAIDLLNQVGIPDPASRLDVY-----PHQLS 155 (326)
T ss_pred HHHHhcCCC----------HHH------------------------HHHHHHHHHHHCCCCChHHHHhCC-----chhCC
Confidence 543221000 000 0123667899999964 23433 34599
Q ss_pred cccchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEe
Q 000860 148 GGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVY 227 (1250)
Q Consensus 148 GGqkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~ 227 (1250)
|||||||+|||||+.+|++|++||||+|||+.++.++++.|+++.++.+.|+|++ +|+...+.+++|+|++|++|++++
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~i-THdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLI-THDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999987667888776 455677888999999999999999
Q ss_pred ecChhhHHH
Q 000860 228 QGPRAEVLE 236 (1250)
Q Consensus 228 ~G~~~~~~~ 236 (1250)
.|+.+++.+
T Consensus 235 ~g~~~~~~~ 243 (326)
T PRK11022 235 TGKAHDIFR 243 (326)
T ss_pred ECCHHHHhh
Confidence 999988753
No 495
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.3e-31 Score=300.66 Aligned_cols=191 Identities=20% Similarity=0.327 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCc--------ccccceEEeeccccc-cCCCCCHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDE--------FQVQRASAYIGQTDN-HIAELTVRETLDFA 71 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~--------~~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~ 71 (1250)
+++|+||||||||||+++|+|+++|. +|+|.++|.++.. ...++.++|++|++. .+...||+||+.|+
T Consensus 39 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~ 115 (289)
T PRK13645 39 VTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFG 115 (289)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHH
Confidence 47999999999999999999999864 9999999988631 123567999999863 23346999999886
Q ss_pred HHccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCc-cccccccCCCccccCcccc
Q 000860 72 ARCQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLD-LCSDTVVGSEMLRGVSGGQ 150 (1250)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGq 150 (1250)
....+... .+ ....++.+++.++|+ +..++.++ .|||||
T Consensus 116 ~~~~~~~~-----------~~------------------------~~~~~~~ll~~~~L~~~~~~~~~~-----~LS~Gq 155 (289)
T PRK13645 116 PVNLGENK-----------QE------------------------AYKKVPELLKLVQLPEDYVKRSPF-----ELSGGQ 155 (289)
T ss_pred HHHcCCCH-----------HH------------------------HHHHHHHHHHHcCCChhHhcCChh-----hCCHHH
Confidence 43211100 00 001255678888994 55666554 499999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecC
Q 000860 151 KKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGP 230 (1250)
Q Consensus 151 kqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~ 230 (1250)
|||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |+.+++.+.+|++++|++|++++.|+
T Consensus 156 ~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiis-H~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 156 KRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVT-HNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998765578888764 55667888999999999999999999
Q ss_pred hhhHH
Q 000860 231 RAEVL 235 (1250)
Q Consensus 231 ~~~~~ 235 (1250)
.+++.
T Consensus 235 ~~~~~ 239 (289)
T PRK13645 235 PFEIF 239 (289)
T ss_pred HHHHh
Confidence 88764
No 496
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=1.7e-31 Score=339.51 Aligned_cols=189 Identities=24% Similarity=0.360 Sum_probs=150.8
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccccCCCCCHHHHHHHHHHccCCC
Q 000860 2 TLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDNHIAELTVRETLDFAARCQGAN 78 (1250)
Q Consensus 2 ~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~~~ 78 (1250)
+||+||||||||||+|+|+|+++|. +|+|.+||.++++. ..++.++||+|++.+|+ .|++|||.++.. .
T Consensus 482 vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~---~- 553 (686)
T TIGR03797 482 VAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP---L- 553 (686)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCCC---C-
Confidence 7999999999999999999999975 99999999998654 46789999999977765 699999987521 1
Q ss_pred cchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHHHH
Q 000860 79 DSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTTGE 158 (1250)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~iA~ 158 (1250)
+. .++.+.. +.+ ..++.++ .+++..||.+|+++ .+||||||||++|||
T Consensus 554 -~~----e~i~~al---------------~~a---------~l~~~i~--~lp~G~dt~ige~G-~~LSGGQrQRialAR 601 (686)
T TIGR03797 554 -TL----DEAWEAA---------------RMA---------GLAEDIR--AMPMGMHTVISEGG-GTLSGGQRQRLLIAR 601 (686)
T ss_pred -CH----HHHHHHH---------------HHc---------CcHHHHH--hccccccccccCCC-CCCCHHHHHHHHHHH
Confidence 10 0110000 000 0111121 35678899999765 569999999999999
Q ss_pred HHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHHH
Q 000860 159 MIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVLE 236 (1250)
Q Consensus 159 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~~ 236 (1250)
||+++|++|+||||||+||+.++.++.+.|+++ ++|+|++.|++ +..+.+|+|++|++|+++++|+++++.+
T Consensus 602 All~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 602 ALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999999875 46888776553 6678899999999999999999999864
No 497
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=2.9e-31 Score=249.72 Aligned_cols=191 Identities=25% Similarity=0.349 Sum_probs=162.0
Q ss_pred eEEEEeEEEEEeCCcccccccccccccceeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-CeeEEEEEECCcc
Q 000860 649 TMTFHNISYYVDTPQAMRSKGIHEKKLQLLSNVSGIFSPGVLTALVGSSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYP 727 (1250)
Q Consensus 649 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGsGKSTLl~~l~g~~~~-~~~~G~i~~~g~~ 727 (1250)
.+.++|++... ....+|-++|++|.+||++-||||||||||||+..+.|-..+ -..+|++.+|+..
T Consensus 2 ~l~l~nvsl~l-------------~g~cLLa~~n~Tia~GeivtlMGPSGcGKSTLls~~~G~La~~F~~~G~~~l~~~~ 68 (213)
T COG4136 2 MLCLKNVSLRL-------------PGSCLLANVNFTIAKGEIVTLMGPSGCGKSTLLSWMIGALAGQFSCTGELWLNEQR 68 (213)
T ss_pred ceeeeeeeecC-------------CCceEEEeeeEEecCCcEEEEECCCCccHHHHHHHHHhhcccCcceeeEEEECCee
Confidence 36778877433 234689999999999999999999999999999999996543 2478999999998
Q ss_pred CCc-ccccceEEEEcCCCCCCCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000860 728 KEQ-STFARISGYVEQEDVHSPQVTIEESLWFSANLRLPKEISKDQRHEFVEEVMSLVELDSLRHALVGSPGSFGLSTEQ 806 (1250)
Q Consensus 728 ~~~-~~~~~~~~yv~q~~~~~~~ltv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v~~~~~~~lSgGe 806 (1250)
++. ..-+|++|..+||+.+||+++|.+|+.|+. |.....+.++..++..+++.||....+.-.. .|||||
T Consensus 69 l~~lPa~qRq~GiLFQD~lLFphlsVg~Nl~fAl----p~~~KG~aRr~~a~aAL~~~gL~g~f~~dP~-----tlSGGQ 139 (213)
T COG4136 69 LDMLPAAQRQIGILFQDALLFPHLSVGQNLLFAL----PATLKGNARRNAANAALERSGLDGAFHQDPA-----TLSGGQ 139 (213)
T ss_pred ccccchhhhheeeeecccccccccccccceEEec----CcccccHHHHhhHHHHHHHhccchhhhcChh-----hcCcch
Confidence 764 345788999999999999999999998863 4445556777888999999999998877654 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHH-HhhCCCEEEEEecCC
Q 000860 807 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRN-TVDTGRTVVCTIHQP 861 (1250)
Q Consensus 807 rqr~~ia~~l~~~p~il~lDEPTsgLD~~~~~~i~~~l~~-~~~~g~tvi~~~H~~ 861 (1250)
|-||++-|+|+..|+.++||||.|.||..-+.+.-+.+-. ....|..+|.+|||.
T Consensus 140 rARvaL~R~Lla~Pk~lLLDEPFS~LD~ALR~qfR~wVFs~~r~agiPtv~VTHD~ 195 (213)
T COG4136 140 RARVALLRALLAQPKALLLDEPFSRLDVALRDQFRQWVFSEVRAAGIPTVQVTHDL 195 (213)
T ss_pred HHHHHHHHHHHhCcceeeeCCchhHHHHHHHHHHHHHHHHHHHhcCCCeEEEeccc
Confidence 9999999999999999999999999999999998887544 455699999999985
No 498
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.3e-31 Score=299.03 Aligned_cols=193 Identities=26% Similarity=0.344 Sum_probs=155.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCcc---cccceEEeeccccc-cCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEF---QVQRASAYIGQTDN-HIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~~~yv~Q~~~-~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+||||||||||+++|+|+++|....+|+|.++|.++... ..++.++|++|++. .++..||+||+.|+....+
T Consensus 35 ~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~ 114 (282)
T PRK13640 35 WTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRA 114 (282)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCC
Confidence 4799999999999999999999986411239999999987532 23567999999863 6778999999987643221
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
... .+ ..++++++++.+||.+..++.+. .||||||||++|
T Consensus 115 ~~~-----------~~------------------------~~~~~~~~l~~~~L~~~~~~~~~-----~LS~G~~qrv~l 154 (282)
T PRK13640 115 VPR-----------PE------------------------MIKIVRDVLADVGMLDYIDSEPA-----NLSGGQKQRVAI 154 (282)
T ss_pred CCH-----------HH------------------------HHHHHHHHHHHCCChhHhcCCcc-----cCCHHHHHHHHH
Confidence 100 00 01135678899999887777664 499999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|||||||+|||+.++..+.+.|++++++.|+|+|++.|+ ...+ ..+|++++|++|++++.|+++++.
T Consensus 155 aral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~-~~~~-~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 155 AGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHD-IDEA-NMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHH-HhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999876557888887655 4455 579999999999999999998764
No 499
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=4.2e-31 Score=292.85 Aligned_cols=197 Identities=22% Similarity=0.325 Sum_probs=155.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCeecCccc----ccceEEeeccccccCCCCCHHHHHHHHHHccC
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGNLNKSGSITYNGWELDEFQ----VQRASAYIGQTDNHIAELTVRETLDFAARCQG 76 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~~~~ 76 (1250)
+++|+|||||||||||++|+|+++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~ 106 (242)
T TIGR03411 30 LRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDK 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhccc
Confidence 47999999999999999999999865 999999998875322 23469999999999999999999988643110
Q ss_pred CCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCccccccccCCCccccCccccchhhHH
Q 000860 77 ANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDLCSDTVVGSEMLRGVSGGQKKRVTT 156 (1250)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~i 156 (1250)
............ ..+.+++++++.+|+++..++.+++ |||||||||+|
T Consensus 107 ---~~~~~~~~~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~Ge~qrv~l 154 (242)
T TIGR03411 107 ---SVFASLFFRLSA------------------------EEKDRIEEVLETIGLADEADRLAGL-----LSHGQKQWLEI 154 (242)
T ss_pred ---ccccccccccHH------------------------HHHHHHHHHHHHcCCchhhcCChhh-----CCHHHHHHHHH
Confidence 000000000000 0012367789999998877777654 99999999999
Q ss_pred HHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeecChhhHH
Q 000860 157 GEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQGPRAEVL 235 (1250)
Q Consensus 157 A~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G~~~~~~ 235 (1250)
||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|+|++. |+.+++.+++|++++|++|++++.|+++++.
T Consensus 155 aral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~s-H~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 155 GMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVE-HDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEE-CCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 9999999999999999999999999999999999864 57887775 4567788899999999999999999987753
No 500
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.1e-31 Score=293.47 Aligned_cols=194 Identities=24% Similarity=0.355 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCeecCc-----ccccceEEeeccccccCCCCCHHHHHHHHHH
Q 000860 1 MTLLLGPPGSGKSTLLLALAGKLDGN--LNKSGSITYNGWELDE-----FQVQRASAYIGQTDNHIAELTVRETLDFAAR 73 (1250)
Q Consensus 1 ~~~ivGp~GsGKSTLl~~l~G~~~~~--~~~~G~v~~~g~~~~~-----~~~~~~~~yv~Q~~~~~~~~TV~e~l~f~~~ 73 (1250)
+++|+||||||||||+++|+|+++|+ .+.+|+|+++|.++.. ...++.++|++|++.+++.+||.||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (253)
T PRK14267 32 VFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVK 111 (253)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999762 1359999999998741 1245679999999989999999999988653
Q ss_pred ccCCCcchhhHhHhhhHHHHhhccCCCchhHHHHhhhccCCCcccccHHHHHHHhCCcc----ccccccCCCccccCccc
Q 000860 74 CQGANDSFAAYIKDLTRLEKERHIRPNPEIDAFMKASSVGGKKHSVSTDYVLNVLGLDL----CSDTVVGSEMLRGVSGG 149 (1250)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~~t~vg~~~~~~LSGG 149 (1250)
.++..... .+ . ...++++++.+||.+ ..++.+ ..||||
T Consensus 112 ~~~~~~~~----~~---------------~--------------~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LS~G 153 (253)
T PRK14267 112 LNGLVKSK----KE---------------L--------------DERVEWALKKAALWDEVKDRLNDYP-----SNLSGG 153 (253)
T ss_pred hcCccCCH----HH---------------H--------------HHHHHHHHHHcCCccchhhhhccCh-----hhCCHH
Confidence 22110000 00 0 012456777778742 234443 459999
Q ss_pred cchhhHHHHHHhcCCcEeeeeCCCccccHHHHHHHHHHHHHHHHhCCCEEEEEecCCChhHHhhccceEEecCCeEEeec
Q 000860 150 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCVRNFVHQMDATALMALLQPPPETFELFDDLVLLSDGYLVYQG 229 (1250)
Q Consensus 150 qkqRv~iA~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~~~~~~~~~~~D~i~~l~~G~i~~~G 229 (1250)
||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++. |+..++.+.+|++++|++|++++.|
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~s-H~~~~~~~~~d~i~~l~~G~i~~~~ 230 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVT-HSPAQAARVSDYVAFLYLGKLIEVG 230 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEE-CCHHHHHhhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999854 57877765 5566778899999999999999999
Q ss_pred ChhhHH
Q 000860 230 PRAEVL 235 (1250)
Q Consensus 230 ~~~~~~ 235 (1250)
+++++.
T Consensus 231 ~~~~~~ 236 (253)
T PRK14267 231 PTRKVF 236 (253)
T ss_pred CHHHHH
Confidence 988764
Done!