BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000863
(1247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z1T6|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus
GN=Pikfyve PE=1 SV=3
Length = 2097
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 18/293 (6%)
Query: 24 EPLRAVVQGHFRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTS-RGGS 82
E L + H AL+ +LL+ E + W II ++ Q V+PD +
Sbjct: 606 ERLLSANHNHMMALLQQLLQNESLS-------SSWRDIIVSLVCQVVQTVRPDVKHQDDD 658
Query: 83 MDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEY-QRVP 141
MD +V +K I G +S + G VCTKNI HK+M S +NP++L+L ++EY R
Sbjct: 659 MDIRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAHKKMNSCIKNPKILLLKCSIEYLYREE 718
Query: 142 NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRP 201
+ + ++ QE + LK + +I +RP ++LVEK+VS AQD+LL I+LV+NVK
Sbjct: 719 TKFTCIDPIVLQEREFLKNYVQRIVDVRPTLVLVEKTVSRIAQDMLLEHGITLVINVKSQ 778
Query: 202 LLERIARCTGALITPSIDNIST-TRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEG 260
+LERI+R T + S+D + T LG C F ++ Q + +KTLM+FEG
Sbjct: 779 VLERISRMTQGDLVVSMDQLLTKPHLGTCHKFYMQIF--------QLPNEQTKTLMFFEG 830
Query: 261 CPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKM 313
CP+ LGC + LRG EL +VK ++ + + AYH LE SFL DE A P +
Sbjct: 831 CPQHLGCTIKLRGGSDYELARVKEILIFMICVAYHSQLEISFLMDEFAMPPTL 883
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 122/268 (45%), Gaps = 65/268 (24%)
Query: 1017 VVIAVFDDDPTSIISYALSSKEY-----------------EDWVADKLYDNDGS------ 1053
V IAV + +P+SII++ALS KEY E A+ DN
Sbjct: 1657 VPIAVCEKEPSSIIAFALSCKEYRNALEELSKATLRNSAEEGLPANSALDNRPKSSSPIR 1716
Query: 1054 ---WSAGEIH----------KEGSAVSSFSAWQSFGSLDLD-------------YIHYGS 1087
S G+ + K+ S + SF + S DL Y G
Sbjct: 1717 LPEISGGQTNRTVEAEPQPTKKASGMLSFFRGTAGKSPDLSSQKRETLRGADSAYYQVGQ 1776
Query: 1088 YGSEDASSS-------VGTLFTDPKK--SPHLTISFGDESSTAGGKVKFSVTSYFAKQFD 1138
G E S V T K+ +PH+ + F D KF Y+A +F
Sbjct: 1777 AGKEGLESQGLEPQDEVDGGDTQKKQLTNPHVELQFSD------ANAKFYCRLYYAGEFH 1830
Query: 1139 SLRKKCCPSGVD-FVRSLSRSRKWSAQGGKSNVFFAKSLDERFIIKQVKKTELESFEEFA 1197
+R+ S + F+RSLS S W A+GGKS F + D+RFI+KQ+ + E++SF +FA
Sbjct: 1831 KMREVILGSSEEEFIRSLSHSSPWQARGGKSGAAFYATEDDRFILKQMPRLEVQSFLDFA 1890
Query: 1198 PEYFKYLTDSLNSRSPTCLAKILGIYQV 1225
P YF Y+T+++ + PT LAKILG+Y++
Sbjct: 1891 PHYFNYITNAVQQKRPTALAKILGVYRI 1918
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 490 CERSRLLRIKFYGSFDKPLGRYLHGDLFNQTSCCRS--CNESAEAHVLCYTHQQGNLTIS 547
C ++ ++FYG D LG +L F + C S C+ H+ + H QG + I
Sbjct: 1235 CVSPWIVTMEFYGKNDLTLGIFLERYCFRSSYQCPSMFCDTPMVHHIRRFVHGQGCVQII 1294
Query: 548 VKCLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMSDAAWGLSFGKFLELSFSN 607
+K L S +PG + I + C C V V +S+ +W +SF K+LEL F
Sbjct: 1295 LKELDSP-VPGYQH-TILTYSWCRICKQVTPV------VALSNESWSMSFAKYLELRFYG 1346
Query: 608 HATANRIAS--CGHSLQRDCLRYYGFGSMIAIFRYSPIDILSVHLPPSVLEFNGLLQQEW 665
H R + CGHS+ D +Y+ + M+A F YSPI +L V +P L + +
Sbjct: 1347 HQYTRRANAEPCGHSIHHDYHQYFSYNQMVASFSYSPIRLLEVCVP---------LPKIF 1397
Query: 666 IRKEAEELKVK----METLYAEISNVLEVMEQRSNSIGCEMSDST--DLKSHILELKVQL 719
I+++A LKV ++ + ++S V +++R S+ + T + I K
Sbjct: 1398 IKRQA-PLKVSLLQDLKDFFQKVSQVYLAVDERLASLKTDTFSKTREEKMEDIFAQKEME 1456
Query: 720 ESERNDYIGLLQPVVMETS--EPGQTAVDILELNRLRRALLIGSHAWDRQLYSL 771
E E ++ +Q +M +S P Q L +++L AW+ +L L
Sbjct: 1457 EGEFKNWTEKMQARLMSSSVDTPQQLQSIFESLIAKKQSLCEVLQAWNSRLQDL 1510
>sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens
GN=PIKFYVE PE=1 SV=3
Length = 2098
Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 150/259 (57%), Gaps = 11/259 (4%)
Query: 58 WLGIITTIAWQAANFVKPDT-SRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKH 116
W II ++ Q V+PD ++ MD +V +K I G +S + G VCTKNI H
Sbjct: 633 WRDIIVSLVCQVVQTVRPDVKNQDDDMDIRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAH 692
Query: 117 KRMTSQYRNPRLLILGGALEY-QRVPNQLASFNTLLQQENDHLKMVISKIEALRPNVLLV 175
K+M+S +NP++L+L ++EY R + + ++ QE + LK + +I +RP ++LV
Sbjct: 693 KKMSSCIKNPKILLLKCSIEYLYREETKFTCIDPIVLQEREFLKNYVQRIVDVRPTLVLV 752
Query: 176 EKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNIST-TRLGHCELFKL 234
EK+VS AQD+LL I+LV+NVK +LERI+R T + S+D + T LG C F +
Sbjct: 753 EKTVSRIAQDMLLEHGITLVINVKSQVLERISRMTQGDLVMSMDQLLTKPHLGTCHKFYM 812
Query: 235 EKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAY 294
+ Q + +KTLM+FEGCP+ LGC + LRG EL +VK ++ + + AY
Sbjct: 813 QIF--------QLPNEQTKTLMFFEGCPQHLGCTIKLRGGSDYELARVKEILIFMICVAY 864
Query: 295 HLSLETSFLADEGATLPKM 313
H LE SFL DE A P +
Sbjct: 865 HSQLEISFLMDEFAMPPTL 883
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 65/268 (24%)
Query: 1017 VVIAVFDDDPTSIISYALSSKEYED----------W--VADKLYDNDGS----------- 1053
V IAV + +P+SII++ALS KEY + W + L N S
Sbjct: 1658 VPIAVCEKEPSSIIAFALSCKEYRNALEELSKATQWNSAEEGLPTNSTSDSRPKSSSPIR 1717
Query: 1054 ---WSAGEIH----------KEGSAVSSFSAWQSFGSLDLD-------------YIHYGS 1087
S G+ + K+ S + SF + S DL Y G
Sbjct: 1718 LPEMSGGQTNRTTETEPQPTKKASGMLSFFRGTAGKSPDLSSQKRETLRGADSAYYQVGQ 1777
Query: 1088 YGSE-------DASSSVGTLFTDPKK--SPHLTISFGDESSTAGGKVKFSVTSYFAKQFD 1138
G E + V T K+ +PH+ + F D KF Y+A +F
Sbjct: 1778 TGKEGTENQGVEPQDEVDGGDTQKKQLINPHVELQFSD------ANAKFYCRLYYAGEFH 1831
Query: 1139 SLRKKCCPSGV-DFVRSLSRSRKWSAQGGKSNVFFAKSLDERFIIKQVKKTELESFEEFA 1197
+R+ S DF+RSLS S W A+GGKS F + D+RFI+KQ+ + E++SF +FA
Sbjct: 1832 KMREVILDSSEEDFIRSLSHSSPWQARGGKSGAAFYATEDDRFILKQMPRLEVQSFLDFA 1891
Query: 1198 PEYFKYLTDSLNSRSPTCLAKILGIYQV 1225
P YF Y+T+++ + PT LAKILG+Y++
Sbjct: 1892 PHYFNYITNAVQQKRPTALAKILGVYRI 1919
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 30/294 (10%)
Query: 490 CERSRLLRIKFYGSFDKPLGRYLHGDLFNQTSCCRS--CNESAEAHVLCYTHQQGNLTIS 547
C ++ ++FYG D LG +L F + C S C+ H+ + H QG + I
Sbjct: 1236 CVSPWIVTMEFYGKNDLTLGIFLERYCFRPSYQCPSMFCDTPMVHHIRRFVHGQGCVQII 1295
Query: 548 VKCLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMSDAAWGLSFGKFLELSFSN 607
+K L S +PG + I + C C V V +S+ +W +SF K+LEL F
Sbjct: 1296 LKELDSP-VPGYQH-TILTYSWCRICKQVTPV------VALSNESWSMSFAKYLELRFYG 1347
Query: 608 HATANRIAS--CGHSLQRDCLRYYGFGSMIAIFRYSPIDILSVHLPPSVLEFNGLLQQEW 665
H R + CGHS+ D +Y+ + M+A F YSPI +L V +P L + +
Sbjct: 1348 HQYTRRANAEPCGHSIHHDYHQYFSYNQMVASFSYSPIRLLEVCVP---------LPKIF 1398
Query: 666 IRKEAEELKVK----METLYAEISNVLEVMEQRSNSIGCEMSDST--DLKSHILELKVQL 719
I+++A LKV ++ + ++S V +++R S+ + T + I K
Sbjct: 1399 IKRQA-PLKVSLLQDLKDFFQKVSQVYVAIDERLASLKTDTFSKTREEKMEDIFAQKEME 1457
Query: 720 ESERNDYIGLLQPVVMETS--EPGQTAVDILELNRLRRALLIGSHAWDRQLYSL 771
E E ++I +Q +M +S P Q L +++L AW+ +L L
Sbjct: 1458 EGEFKNWIEKMQARLMSSSVDTPQQLQSVFESLIAKKQSLCEVLQAWNNRLQDL 1511
>sp|B0G126|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium
discoideum GN=pip5k3 PE=3 SV=1
Length = 2656
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 176/340 (51%), Gaps = 52/340 (15%)
Query: 12 FPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAAN 71
F +E+ N + +Q H LVSE L I L W II + +A +
Sbjct: 904 FDEKERLKISNNPQMSVYIQ-HINNLVSEQLEKNNIDLS-------WRSIIIDLTKKATD 955
Query: 72 FVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLIL 131
VK +G M +Y+K+K I G+ +E ++ GVV TK + HK+M ++ NP++L+L
Sbjct: 956 NVKIFVRKGDKMSTNEYIKIKKIPGGNKSECNYVDGVVMTKILTHKKMKDKFINPKILLL 1015
Query: 132 GGALEYQRVPNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKE 191
++E+QRV N+ F+ LLQQE ++L++++SKI +P+++LVEK+VS +AQD LL
Sbjct: 1016 SCSVEFQRVENKFLYFDQLLQQEKEYLRILVSKIAERKPDLVLVEKTVSRHAQDFLLDAG 1075
Query: 192 ISLVLNVKRPLLERIARCTGALITPSIDNI------------------------------ 221
ISL LNVK LLER+ RC G + P++D I
Sbjct: 1076 ISLALNVKPKLLERLGRCLGGEVLPTLDIIYNNNSNNNNSNSIQLQQQQNSNSPASLQNS 1135
Query: 222 ------------STTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMV 269
++T LG C FK+ SE + K KTLMYFE CP LG +
Sbjct: 1136 TTTTNNNNNNNNNSTTLGSCGQFKVITYSEIGLKEKEILGK--KTLMYFEKCPVELGATI 1193
Query: 270 LLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGAT 309
++RG+ LK +K +++ ++F+ ++ LE +L D+ +T
Sbjct: 1194 IIRGEDLAVLKIIKKILKLSIFSMHNAYLELKYLNDQSST 1233
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 1122 GGKVKFSVTSYFAKQFDSLRKKCCPSGVDFVRSLSRSRKWSAQGGKSNVFFAKSLDERFI 1181
G ++ +SY+ QF +LR+ C +F++SL+RS+ W+A+GGKS + K+LD+RFI
Sbjct: 2336 GYELNIFCSSYYPVQFHALREYMC-GDQEFIQSLTRSKIWNAKGGKSGSSWNKTLDDRFI 2394
Query: 1182 IKQVKKTELESFEEFAPEYFKYLTDSLNSRSPTCLAKILGIYQVR 1226
+KQV + ELESF +FAP YF+Y+ S ++ PT L KILG++ VR
Sbjct: 2395 LKQVSRIELESFLDFAPLYFEYICKSFLNQIPTALCKILGVFTVR 2439
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 126/316 (39%), Gaps = 40/316 (12%)
Query: 473 QSILVSFSSRCVLKGTVCERSRLLRIKFYGSFDKPLGRYLHGDLFNQTSC-CRSCNESAE 531
QSI+ S S C C + I +Y D LG +L F+ C + CN
Sbjct: 1333 QSIVFSHSIFC--NSNQCIPFEIHAIDYYTDNDLTLGEFLSKFCFSLHICNIKECNRPLI 1390
Query: 532 AHVLCYTHQQGNLTISVKCLSSVR-------------LPGERDGKIWMWHRCLRCAHADG 578
H + + + I V+ +++ P +R G I + + C C
Sbjct: 1391 EHERTFMNSTTRINICVQKTQTIQDRPTNSSPAQQRNQPVQRAG-INVINLCKICNKFSP 1449
Query: 579 VPPATRRVVMSDAAWGLSFGKFLELSFSNHATANRIAS--CGHSLQRDCLRYYGFGSMIA 636
P MS+ AW +SFGKFLEL F S C H+ +D + Y+ + + A
Sbjct: 1450 ESP------MSEEAWEMSFGKFLELCFFGFLPIKTGISPECSHNNAKDHISYFYYQDLAA 1503
Query: 637 IFRYSPIDILSVHLPPSVLEFNGLLQQEWIRKEAEELKVK-METLYAEISNVLEVMEQRS 695
IF Y P+ L + LPP L+ + K+ + ++ K +E + + V + +R
Sbjct: 1504 IFSYEPLPSLELSLPPKN------LKATYTEKQRQSVRAKELEIMNQCANQVYSAIHERL 1557
Query: 696 NSIGCEMSDSTDLKSHILELKVQLESERNDYIGLLQPVVMETSEPGQTAVDILELNRLRR 755
IG E + + EL L E+ ++ +++ ++ I+ L +L
Sbjct: 1558 YEIGQE-----NQGDRVQELIPSLVQEKQLICSKIESLLLLPESAHKSNDQIINLTKLLY 1612
Query: 756 ALLIGSHAWDRQLYSL 771
A + W+ QL L
Sbjct: 1613 ANFM---TWNSQLTGL 1625
>sp|O96838|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila
melanogaster GN=fab1 PE=1 SV=2
Length = 1809
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 33 HFRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVK 92
H L++++LRA + +++W ++ + AAN KP+ MD +YV K
Sbjct: 462 HEEQLLAQMLRAHNL-------DQEWDKVLQMLCSTAANHFKPEHCSNDLMDIRNYVNFK 514
Query: 93 CIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQLASFNTLLQ 152
+ G +S + GV +KN+ HK M + PR+L+L + Y+R+ + + T+L
Sbjct: 515 KVPGGRRKDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIETVLL 574
Query: 153 QENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGA 212
QE ++L+ V ++I + +PNV+LV K+V+ AQDLL + E++LVL+VK ++ER++R
Sbjct: 575 QEKEYLRNVCARIMSFKPNVVLVHKNVAGIAQDLLRSYEVTLVLDVKLSVMERLSRTLQC 634
Query: 213 LITPSID-NISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLL 271
I SI+ NI+ +LG+C F + + KTLM+FE G LL
Sbjct: 635 DIVSSIESNITMPKLGYCNDFYIRNYN-------------GKTLMFFEKLTNPRGYTCLL 681
Query: 272 RGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGA 308
RG EL +VK V +FA Y+ LE SFL +E A
Sbjct: 682 RGGSNAELTRVKRVASALLFARYNWRLEMSFLLNEFA 718
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 75/276 (27%)
Query: 1017 VVIAVFDDDPTSIISYALSSKEYEDWVADKLYDNDGSWSAGEIHKEGSAVSSFSAWQSFG 1076
+ I V + D +S+I+Y+L+S +Y+ + + +++ + S+ ++ ++ S S +
Sbjct: 1368 IPIHVRETDLSSVIAYSLTSMDYQKAIDEAEANSNAAHSSPQLKRKIPLAESVSDAEDSP 1427
Query: 1077 SL-----------DLDYIHYGSYGSEDASSSVGTLFTDPKKSPHLTISFGDESSTAGGKV 1125
SL + + SE S + P SPH+T++F D S
Sbjct: 1428 SLSRTSSNTSAAPNASVPSPATAASESEEKSKERIKQPP--SPHITLAFQDHS------C 1479
Query: 1126 KFSVTSYFAKQFDSLRKKCC--------------------------------------PS 1147
+F YFA++FD++R K PS
Sbjct: 1480 QFQCKIYFAREFDAMRSKSLKPPKLDKSLYRRLEKSKMREELRISQSRTGSEMELVRKPS 1539
Query: 1148 GVDFVRS------------------LSRSRKWSAQGGKSNVFFAKSLDERFIIKQVKKTE 1189
V R+ L +S +W A+GGKS F K+LD+RF++K++ +
Sbjct: 1540 DVGAPRTTEDDSNQEEDARIALARSLCKSVQWEARGGKSGSRFCKTLDDRFVLKEMNSRD 1599
Query: 1190 LESFEEFAPEYFKYLTDSLNSRSPTCLAKILGIYQV 1225
+ FE FAP+YF+Y+ + PT LAKI G+++V
Sbjct: 1600 MTIFEPFAPKYFEYIDRCQQQQQPTLLAKIFGVFRV 1635
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 487 GTVCERSRLLRIKFYGSFDKPLGRYL--HGDLFNQTSCCRSCNESAEAHVLCYTHQQGNL 544
+ C+ LL +KFYG +D L ++L + LFN S C SCN HV Y H G +
Sbjct: 972 SSFCKLPMLLDMKFYGQYDIMLEQFLQRYCCLFN--SMCPSCNLPMLGHVRRYVHSLGCV 1029
Query: 545 TISVKCLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMSDAAWGLSFGKFLELS 604
+ + + L +I+ C C T + +SDAA LS K+LE+
Sbjct: 1030 HVYL----TEDLTRSDPTRIYFTSWCSICNA------TTPTIPLSDAAKCLSLAKYLEMR 1079
Query: 605 FSNHATANRIAS---------CGHSLQRDCLRYYGFGSMIAIFRYSPIDILSVHLPPSVL 655
F HA R S C HSL RD + ++ F + A F+Y+P+++ LP +
Sbjct: 1080 FHGHAYKRRPPSTDAEQGGTVCEHSLHRDYVHHFSFRGVGAKFQYTPVEVWETDLPSLTV 1139
Query: 656 EFN--GLLQQEWIRKEAEELKVKMETLYAEI 684
+ + Q +++E + +K +Y I
Sbjct: 1140 QLDLPQPFQSAQVQEEIKNFSIKGHEVYNRI 1170
>sp|P34756|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3
Length = 2278
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 10/219 (4%)
Query: 88 YVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQLASF 147
YVK+K I+ GSP S +I GVV +K + K M +NPR+L++ LEYQ+ N S
Sbjct: 845 YVKIKRISGGSPQNSEYIDGVVFSKALPSKTMPRHLKNPRILLIMFPLEYQKNNNHFLSI 904
Query: 148 NTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIA 207
++ +QE ++L ++S++++L P+++ V +VS YA +LL I + N+K ++ERIA
Sbjct: 905 ESVFRQEREYLDKLVSRLKSLHPDIIYVGANVSGYALELLNDSGIVVQFNMKPQVIERIA 964
Query: 208 RCTGALITPSIDNISTT-RLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLG 266
+ T A I S+D ++T ++G CE F E + SKT + GC LG
Sbjct: 965 KLTEADIAISVDKLATNIKMGECETF---------EVKSYIYGNISKTYTFLRGCNPELG 1015
Query: 267 CMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLAD 305
+LLRG E L+K+K V ++ V+A + L LE+SF D
Sbjct: 1016 GTILLRGDSLENLRKIKQVSEFMVYAIFSLKLESSFFND 1054
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 1105 KKSPHLTISFGDESSTAGGKVKFSVTSYFAKQFDSLRKKCCPSGVDFVRSLSRSRKWSAQ 1164
K + HL F + G S +F + FD RK C +F++SLSR KW +
Sbjct: 1988 KTATHLRYQFEE------GLTVMSCKIFFTEHFDVFRK-ICDCQENFIQSLSRCVKWDSN 2040
Query: 1165 GGKSNVFFAKSLDERFIIKQVKKTELESFEEFAPEYFKYLTDSLNSRSPTCLAKILGIYQ 1224
GGKS F K+LD+RFIIK++ ELE+F +FAP YF+Y+ ++ PT LAK+ G YQ
Sbjct: 2041 GGKSGSGFLKTLDDRFIIKELSHAELEAFIKFAPSYFEYMAQAMFHDLPTTLAKVFGFYQ 2100
Query: 1225 VR 1226
++
Sbjct: 2101 IQ 2102
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 471 TNQSILVSFSSRCVLKGTVCERSRLLRIKFYGSFDKPLGRYLHGDLFN-QTSCCRSCNES 529
++QSI V +S T C +++ I ++ D +G+++ + + C + CN
Sbjct: 1191 SHQSITVLYSMVSTKTATPCVGPQIVTIDYFWDSDISIGQFIENVVGTARYPCQQGCNGL 1250
Query: 530 AEAHVLCYTHQQGNLTISVKCLSSVRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMS 589
H Y H G + + ++ + RLP +D I W C +C + + + +S
Sbjct: 1251 YLDHYRSYVHGSGKVDVLIEKFQT-RLPKLKD-IILTWSYCKKCGTSTPI------LQIS 1302
Query: 590 DAAWGLSFGKFLELSF-SNHATANRIASCGHSLQRDCLRYYGFGSMIAIFRYSPIDILSV 648
+ W SFGK+LE+ F S + I C H +D ++Y+G+ ++ YS +++ +
Sbjct: 1303 EKTWNHSFGKYLEVMFWSYKDSVTGIGKCPHDFTKDHVKYFGYNDLVVRLEYSDLEVHEL 1362
Query: 649 HLPPSVLEFNGLLQQEWIRKEAEELKVKMETLYAEISNVLEVMEQRSNSIGCEMS 703
PP +++ K ++K+K+E Y +++E+ +N G +S
Sbjct: 1363 ITPPRKIKW----------KPHIDIKLKVELYY-------KILEKINNFYGSVLS 1400
>sp|O59722|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fab1 PE=3 SV=2
Length = 1932
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 12/278 (4%)
Query: 37 LVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAK 96
L+ ++L EG+ DS W+ + I + A + PD G +D YVK+K I
Sbjct: 478 LLFQMLNDEGV-----DSPMQWVLCLPKILLKMALDLGPDIRSGDDIDVRSYVKIKKIPG 532
Query: 97 GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQLASFNTLLQQEND 156
GS + + GV+ +K K M R PR+ +L +L+Y ++ S + ++ Q+ +
Sbjct: 533 GSIQDCFLVNGVLFSKKASSKSMDRSLRRPRIALLTFSLDYACDEQRILSLDLIISQQEE 592
Query: 157 HLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITP 216
++ ++++I L+PN++ + + S A + +K +L IARC A I
Sbjct: 593 YIINLVNRICMLKPNLVFAQGQIPSIALKYFEEHGVIAFHGLKESVLYDIARCCRADIIS 652
Query: 217 SIDNIS-TTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKC 275
SID +S RLG C F+L + NK KT + C RLGC ++LRG
Sbjct: 653 SIDKLSLCPRLGTCGRFQLRTYVVDE------NKGLRKTFAILDRCSERLGCTIVLRGAD 706
Query: 276 REELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKM 313
+L KVK +V+ V AYH+ LE + L D+ +P++
Sbjct: 707 YNQLSKVKKIVELVVLIAYHIKLECALLRDKFVNMPEL 744
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 1013 GDNDVVIAVFDDDPTSIISYALSSKEYEDWVADKLYDNDGSWSAGEIHKEGSAVSSFSAW 1072
D++V+I +D+P+S+IS+ LSS +Y + EI
Sbjct: 1583 SDSNVIIR--EDEPSSLISFTLSSPDYLSKMV-------------EIE------------ 1615
Query: 1073 QSFGSLDLDYIHYGSYGSEDASSSVGTLFTDPKKSPHLTISFGDESSTAGGKVKFSVTSY 1132
S+D + G GS + L P + HL F + G + S +
Sbjct: 1616 ---DSMDEALTNQGLQGS--TQFKIENLMLKPTGT-HLKYQFEE------GSARLSCKVF 1663
Query: 1133 FAKQFDSLRKKC-CPSGVDFVRSLSRSRKWSAQGGKSNVFFAKSLDERFIIKQVKKTELE 1191
FA+QF +LR+ C C FV SL+R W + GGKS F K+ D+++I+K + + E +
Sbjct: 1664 FAEQFSALRRACGCEET--FVTSLARCSLWESSGGKSGSAFLKTFDKKYILKVLSRLESD 1721
Query: 1192 SFEEFAPEYFKYLTDSLNSRSPTCLAKILGIYQV 1225
S FAP YF Y++ PT L KI G Y+V
Sbjct: 1722 SLLNFAPAYFDYISKVFFHELPTALTKIFGFYRV 1755
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 498 IKFYGSFDKPLGRYLHGDLFNQTSCC--RSCNESAEA-HVLCYTHQQGNLTISVKCLS-S 553
++FY D LG+Y+ N C C + H Y H GN ISV S S
Sbjct: 947 LEFYRETDCTLGQYIEDSCLNTNVSCGGEYCKTNDMLWHYRSYVH--GNSRISVFLESFS 1004
Query: 554 VRLPGERDGKIWMWHRCLRCAHADGVPPATRRVVMSDAAWGLSFGKFLELSFSNHATANR 613
+PG + KI MW C C T VMS+ W SFGK+LE F N +R
Sbjct: 1005 CPVPGLEE-KIIMWSYCKFCKKN------THITVMSEETWKYSFGKYLEFMFYNSQIRDR 1057
Query: 614 IASCGHSLQRDCLRYYGFGSMIAIFRYSPIDILSVHLPPSVLEFNGLLQQEWIRKEAEEL 673
C HS+ + Y+G+ +M F+ I+I + +P L N +E KE + L
Sbjct: 1058 FEFCDHSVMAQHVHYFGYCNMALRFQRDLIEIFELFVPSVTLRNNPSYIKELKEKEYKRL 1117
Query: 674 KVKMETLYAEISNVLEVMEQRSNSIGCE-MSDSTDLK---SHILELKVQLESERNDYIGL 729
K +E + +++ R N I C+ ++D + S I + + L S+ +
Sbjct: 1118 KGVIEKCLSSVAS-------RINQIKCDWVTDPEKFESCTSEISKFRTLLSSDYTELYSE 1170
Query: 730 LQPVVMETSEPGQTAVDILELNRLRRALLIGSHAWDRQL 768
+ + +S D L LN + R L W+++
Sbjct: 1171 FDSIYLNSS-----TSDYLSLNSILRVLQGKMVKWEQRF 1204
>sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2
Length = 534
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 38/305 (12%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPG------DYVKVKCIAKGSPNESTFIKGVVCT 111
W + +A A V+ D + +P YV+V+ I G +S +KGV+
Sbjct: 167 WSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLN 226
Query: 112 KNIKHKRMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISK 164
K++ H +M+ NPR+++L LEY++ +Q +N +LQ E + ++++ +
Sbjct: 227 KDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286
Query: 165 IEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTT 224
I A+RP +++ EK VS AQ LL S++ VK+ RIAR TGA I ++++ +
Sbjct: 287 ILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKES 346
Query: 225 RLG-HCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVK 283
+G +C LFK+E + +E+ + + C C ++LRG ++ L ++
Sbjct: 347 DVGTNCGLFKVEMIGDEY-------------FSFLDNCKEPKACTIMLRGGSKDILNEID 393
Query: 284 HVVQYAVFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANY 343
+Q A+ A ++ L S GAT + S+ E+ I P Y
Sbjct: 394 RNLQDAMAVARNVMLSPSLSPGGGAT----EMAVSVKLAEKAKQLEGIQQWP-------Y 442
Query: 344 QEVAD 348
Q VAD
Sbjct: 443 QAVAD 447
>sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1
Length = 545
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y +V+ I G +S ++GV+ K++ H
Sbjct: 168 WSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
RM +NPR+++L +LEY++ +Q F +LQ E ++++ + I L+P
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKP 287
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ I+ + V++ RIAR GA I + + +G
Sbjct: 288 DVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L +++K+ +E+ T + C C +LLRG +E L +V+ +Q A
Sbjct: 348 GLLEIKKIGDEYFT-------------FITDCKDPKACTILLRGASKEILSEVERNLQDA 394
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ L+ + GA+ +M + H++++ + M + P VA + +
Sbjct: 395 MQVCRNVLLDPQLVPGGGAS--EMAVAHALTEKSKAM--TGVEQWPYRAVAQALEVIPRT 450
Query: 350 STRDDGSVSLRL 361
++ G+ ++RL
Sbjct: 451 LIQNCGASTIRL 462
>sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4
Length = 545
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y +V+ I G +S ++GV+ K++ H
Sbjct: 168 WSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
RM +NPR+++L +LEY++ +Q F +LQ E ++++ + I L+P
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKP 287
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ I+ + V++ RIAR GA I + + +G
Sbjct: 288 DVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L +++K+ +E+ T + C C +LLRG +E L +V+ +Q A
Sbjct: 348 GLLEIKKIGDEYFT-------------FITDCKDPKACTILLRGASKEILSEVERNLQDA 394
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ L+ + GA+ +M + H++++ + M + P VA + +
Sbjct: 395 MQVCRNVLLDPQLVPGGGAS--EMAVAHALTEKSKAM--TGVEQWPYRAVAQALEVIPRT 450
Query: 350 STRDDGSVSLRL 361
++ G+ ++RL
Sbjct: 451 LIQNCGASTIRL 462
>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum
GN=cct3 PE=1 SV=1
Length = 530
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 26/277 (9%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGS-MDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKH 116
W ++ +A A V G S +D Y KV+ I G ++ I+GV+ K++ H
Sbjct: 166 WGSLMCNLALDAVMTVHIQEEDGRSEIDIKRYAKVEKIPGGDISDCRVIRGVMLNKDVTH 225
Query: 117 KRMTSQYRNPRLLILGGALEYQR--------VPNQLASFNTLLQQENDHLKMVISKIEAL 168
+M +NPR+++L +LEY++ + N+ F+ LL+ E ++++ + I L
Sbjct: 226 PKMKRMIKNPRIVLLDCSLEYKKGESDTMVDITNE-DDFSALLKIEEEYVQRICEDIIKL 284
Query: 169 RPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH 228
+P+++ EK VS AQ + K I+ + +K+ RIAR +GA I D + + +G
Sbjct: 285 KPDLVFTEKGVSDLAQHFFVKKGITCLRRLKKSENNRIARISGATIVSRTDELQESDIGT 344
Query: 229 -CELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQ 287
C LF++ K+ +E+ T + E C C +LLRG ++ L +V+ +
Sbjct: 345 GCGLFEIRKIGDEYFT-------------FLEDCKEPKACTILLRGASKDILNEVERNLT 391
Query: 288 YAVFAAYHLSLETSFLADEGATLPKMRLKHSISKPER 324
A+ A ++ L+ + GA +M L ++S+ +
Sbjct: 392 DALNVARNIVLDPRLVPGGGAI--EMALSQALSEKSK 426
>sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3
PE=2 SV=1
Length = 545
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y KV+ I G +S ++GV+ K++ H
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYAKVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
RM +NPR+++L +LEY++ +Q F +LQ E ++++ + I L+P
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKP 287
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ I+ + V++ RIAR GA I + + +G
Sbjct: 288 DVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L +++K+ +E+ T + C C +LLRG +E L +V+ +Q A
Sbjct: 348 GLLEIKKIGDEYFT-------------FITECKDPKACTILLRGASKEILSEVERNLQDA 394
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ L+ + GA+ +M + H++++ + M + P VA + +
Sbjct: 395 MQVCRNVLLDPQLVPGGGAS--EMAVAHALTEKSKAM--TGVEQWPYRAVAQALEVIPRT 450
Query: 350 STRDDGSVSLRL 361
++ G+ ++RL
Sbjct: 451 LIQNCGASTIRL 462
>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2
SV=2
Length = 547
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y KV+ I G +S ++GV+ K++ H
Sbjct: 167 WADMACGIALDAVKTVELEENGRKEIDIKKYAKVEKIPGGIIEDSCVLRGVMVNKDVTHP 226
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQLA-------SFNTLLQQENDHLKMVISKIEALRP 170
+M +NPR+++L +LEY++ +Q F +LQ E ++++ V I L+P
Sbjct: 227 KMRRLIKNPRIILLDCSLEYKKGESQTEIEITREEDFARILQMEEEYIQQVCEDIIRLKP 286
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ I+ V V++ RIAR GA I D + +G
Sbjct: 287 DVVITEKGISDLAQHYLVKANITAVRRVRKTDNNRIARACGARIASRTDELREEDVGTGA 346
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
LF+++K+ +E+ T + C C ++LRG +E L +V+ +Q A
Sbjct: 347 GLFEIKKIGDEYFT-------------FITDCKDPKACTIVLRGASKEILAEVERNLQDA 393
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ ++ + GA+ +M + H +++ + M + P VA + +
Sbjct: 394 MQVCRNVVIDPYLVPGGGAS--EMSVAHILTEKSKTM--TGVEQWPYRAVAQALEVIPRT 449
Query: 350 STRDDGSVSLRL 361
++ G+ ++R+
Sbjct: 450 LIQNCGASTIRI 461
>sp|Q3T0K2|TCPG_BOVIN T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=1 SV=1
Length = 545
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y +V+ I G +S ++GV+ K++ H
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
RM +NPR+++L +LEY++ +Q F +LQ E ++++ + I L+P
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKP 287
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ I+ + V++ RIAR GA I + + +G
Sbjct: 288 DVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L +++K+ +E+ T + C C +LLRG +E L +V+ +Q A
Sbjct: 348 GLLEIKKIGDEYFT-------------FITECKDPKACTILLRGASKEILSEVERNLQDA 394
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ L+ + GA+ +M + H++++ + M + P VA + +
Sbjct: 395 MQVCRNVLLDPQLVPGGGAS--EMAVAHALTEKSKAM--TGVEQWPYRAVAQALEVIPRT 450
Query: 350 STRDDGSVSLRL 361
++ G+ ++RL
Sbjct: 451 LIQNCGASTIRL 462
>sp|Q9LKI7|TCPG_THAWE T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2
SV=1
Length = 558
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 83 MDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPN 142
+D Y KV+ I G ++ + GV+ K++ H +M + NPR+L+L LEY++ +
Sbjct: 208 VDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGES 267
Query: 143 QL-------ASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLV 195
Q +NTLL+ E ++++ + +I A +P++++ EK VS AQ I+
Sbjct: 268 QTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAF 327
Query: 196 LNVKRPLLERIARCTGALITPSIDNISTTRLGH-CELFKLEKVSEEHETSNQFNKKPSKT 254
+++ R+AR TGA I D I + +G C LF++ K+ EE+
Sbjct: 328 RRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEY------------- 374
Query: 255 LMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGAT----- 309
+FE C C ++LRG ++ L +++ + A+ ++ + L GAT
Sbjct: 375 FAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVS 434
Query: 310 --LPKMRLK-HSISKPERMMADNAISAIPSS 337
L K LK I + + +A+ IP +
Sbjct: 435 VGLRKAGLKLEGIQQGPFLAVGDAMEVIPRT 465
>sp|Q6P502|TCPG_RAT T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1
SV=1
Length = 545
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y +V+ I G +S ++GV+ K++ H
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
RM +NPR+++L +LEY++ +Q F +LQ E ++++ + I L+P
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKP 287
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ ++ + V++ RIAR GA I + + +G
Sbjct: 288 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L +++K+ +E+ T + C C +LLRG +E L +V+ +Q A
Sbjct: 348 GLLEIKKIGDEYFT-------------FITDCKDPKACTILLRGASKEILSEVERNLQDA 394
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ L+ + GA+ +M + H++++ + M + P VA + +
Sbjct: 395 MQVCRNVLLDPQLVPGGGAS--EMAVAHALTEKSKAM--TGVEQWPYRAVAQALEVIPRT 450
Query: 350 STRDDGSVSLRL 361
++ G+ ++RL
Sbjct: 451 LIQNCGASTIRL 462
>sp|P80318|TCPG_MOUSE T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1
Length = 545
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 148/312 (47%), Gaps = 25/312 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V+ + + +D Y +V+ I G +S ++GV+ K++ H
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
RM +NPR+++L +LEY++ +Q F +LQ E +++ + I L+P
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 287
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+V++ EK +S AQ L+ ++ + V++ RIAR GA I + + +G
Sbjct: 288 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L +++K+ +E+ T + C C +LLRG +E L +V+ +Q A
Sbjct: 348 GLLEIKKIGDEYFT-------------FITDCKDPKACTILLRGASKEILSEVERNLQDA 394
Query: 290 VFAAYHLSLETSFLADEGATLPKMRLKHSISKPERMMADNAISAIPSSKVAANYQEVADD 349
+ ++ L+ + GA+ +M + H++++ + M + P VA + +
Sbjct: 395 MQVCRNVLLDPQLVPGGGAS--EMAVAHALTEKSKAM--TGVEQWPYRAVAQALEVIPRT 450
Query: 350 STRDDGSVSLRL 361
++ G+ ++RL
Sbjct: 451 LIQNCGASTIRL 462
>sp|P48605|TCPG_DROME T-complex protein 1 subunit gamma OS=Drosophila melanogaster
GN=Cctgamma PE=2 SV=2
Length = 544
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 21/260 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W + IA A V + +D Y KV+ I G+ ES +KGV+ K++ H
Sbjct: 170 WSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHP 229
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
+M NPR+++L +LEY++ +Q F +LQ E + ++ + + I A++P
Sbjct: 230 KMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFTRMLQIEEEFVQRICADIIAVKP 289
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
+++ EK VS AQ LL I+ + +++ RIAR GA I + ++ +G
Sbjct: 290 DLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGA 349
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
LF+++K+ +E+ T + C C +LLRG ++ L + + +Q A
Sbjct: 350 GLFEVKKIGDEYFT-------------FVTECKEPKACTILLRGASKDILNETERNLQDA 396
Query: 290 VFAAYHLSLETSFLADEGAT 309
+ A +L LE +A GA
Sbjct: 397 LHVARNLVLEPRLVAGGGAV 416
>sp|O74341|TCPG_SCHPO T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct3 PE=1 SV=1
Length = 528
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W ++ +A +A V ++ +D Y +V+ + G S + GV+ K++ H
Sbjct: 166 WSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHP 225
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKIEALRP 170
+M + NPR+++L LEY++ +Q +N +L+ E + +K + I A++P
Sbjct: 226 KMRRRIENPRIVLLDCPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKP 285
Query: 171 NVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGH-C 229
++++ EK VS AQ LL I+ + ++ RIAR GA I ++++ +G C
Sbjct: 286 DLVITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGC 345
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
LF ++K+ +E+ T + GC C +LLRG ++ + +V+ +Q A
Sbjct: 346 GLFYIDKLGDEYYT-------------FLTGCKNPKACTILLRGPSKDIINEVERNLQDA 392
Query: 290 VFAAYHLSLETSFLADEGAT--------LPKMRLKHSISK-PERMMADNAISAIPSSKV 339
+ A ++ GAT K R +++ P R +AD AI IP + V
Sbjct: 393 MAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVAD-AIEIIPRTLV 450
>sp|P54408|TCPG_TETPY T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3
SV=1
Length = 559
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 30/264 (11%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGD-----YVKVKCIAKGSPNESTFIKGVVCTK 112
W +IT +A +A + RGG++ + Y KV+ I G+ +S + GV+ K
Sbjct: 170 WGKLITDLALKAVRTI----MRGGNLQKLNLEIKRYAKVEKIPGGTLEDSVVLDGVMFNK 225
Query: 113 NIKHKRMTSQYRNPRLLILGGALEYQRVPNQL-------ASFNTLLQQENDHLKMVISKI 165
+I H +M +NPR+++L LEY++ + LQQE + L ++ + I
Sbjct: 226 DITHPKMRRFIKNPRVILLDCPLEYKKGESMTNLEMMKETDMTDALQQEMEELALMCNDI 285
Query: 166 EALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTR 225
+P+V++ EK VS AQ LL + +S++ V++ RI+R +GA I + I +
Sbjct: 286 LKHKPDVVITEKGVSDLAQHYLLKQNVSVIRRVRKTDNNRISRVSGATIVNRPEEIQESD 345
Query: 226 LG-HCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKH 284
+G C LF+++ + +E+ T + C C ++LRG ++ L +++
Sbjct: 346 VGKKCGLFEVKLIGDEYFT-------------FMTECENPEACSIILRGASKDVLNEMER 392
Query: 285 VVQYAVFAAYHLSLETSFLADEGA 308
+ + A ++ + + GA
Sbjct: 393 NLHDCLAVAKNIFVNPKLVPGGGA 416
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 74 KPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGG 133
+PD GG DYVK++ GS +S ++G+V K + H M + N ++L+L
Sbjct: 190 RPD---GGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENAKILVLDA 246
Query: 134 ALEYQ--------RVPNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQD 185
LE Q RV + + + L++E L+ ++ KI A NV++ +K + AQ
Sbjct: 247 PLEVQKPELTTKIRVTD-IEKLESFLEEETRMLRDMVEKIAATGANVVITQKGIDEVAQH 305
Query: 186 LLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSN 245
L K I V VKR +E++A+ TGA I S+ ++ LG+ EL + KV E+
Sbjct: 306 FLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELVEERKVGEDK---- 361
Query: 246 QFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLAD 305
+++ EG +LLRG L + + ++ A+ ++ E +
Sbjct: 362 ---------MVFIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGG 412
Query: 306 EGATLPKMRLK 316
GA ++ LK
Sbjct: 413 GGAVEVELALK 423
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 26/240 (10%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K++ G+ ++ I+GVV K + H M + N ++ ++ ALE +
Sbjct: 198 DNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F L+QE LK ++ KI+ + NV+ V+K + AQ L I V
Sbjct: 258 RITSPEQLQAF---LEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I +I +++ LG EL + KV+ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+ EGC +L+RG + +V+ ++ A+ + + +A GA+ ++ +K
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIK 421
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + GS ++ IKGVV K + H M + ++ ++ ALE +
Sbjct: 198 DNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIALINEALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F L+QE L+ ++ KI+ + NV+ V+K + AQ L I V
Sbjct: 258 RITSPEQLQAF---LEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG EL + KV+ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+ EGC +L+RG + +V+ ++ AV + + +A GA P++ L
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGA--PEIELA 419
Query: 317 HSISK 321
S+ +
Sbjct: 420 ISVDE 424
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + GS ++ IKGVV K + H M + ++ ++ ALE +
Sbjct: 198 DNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F L+QE L+ ++ KI+ + NV+ V+K + AQ L I V
Sbjct: 258 RITSPEQLQAF---LEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG EL + KV+ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRL 315
+ EGC +L+RG + +V+ ++ AV + + +A GA P++ L
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGA--PEIEL 418
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + GS ++ IKGVV K + H M + ++ ++ ALE +
Sbjct: 198 DNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F L+QE L+ ++ KI+ + NV+ V+K + AQ L I V
Sbjct: 258 RITSPEQLQAF---LEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG EL + KV+ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRL 315
+ EGC +L+RG + +V+ ++ AV + + +A GA P++ L
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGA--PEIEL 418
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 33/235 (14%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + A ES ++GVV K + H RM + N ++ ++ ALE ++
Sbjct: 198 DNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P+QL SF L+QE LK ++ I NV+ V+K + AQ L I V
Sbjct: 258 NITSPDQLMSF---LEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG+ E+ + K++ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLP 311
+ EGC +L+RG + +V+ ++ AV + ++GA LP
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVM-------EDGAVLP 409
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 33/235 (14%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + A ES ++GVV K + H RM + N ++ ++ ALE ++
Sbjct: 198 DNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P+QL SF L+QE LK ++ I NV+ V+K + AQ L I V
Sbjct: 258 NITSPDQLMSF---LEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG+ E+ + K++ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLP 311
+ EGC +L+RG + +V+ ++ AV + ++GA LP
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVM-------EDGAVLP 409
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + S +E+ I+GVV K + H M + N ++ ++ ALE +
Sbjct: 198 DNIKFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F L+QE L+ ++ KI+ + NV+ V+K + AQ L I V
Sbjct: 258 RITSPEQLQAF---LEQEERMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG EL + KV+ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRL 315
+ EGC +L+RG + +V+ ++ AV + + L GA P++ L
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGA--PEIEL 418
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 26/240 (10%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + G+ +++ I+GVV K + H M + ++ ++ ALE +
Sbjct: 198 DNIKFEKKEGGAVSDTKLIRGVVIDKEVVHPGMPKRVEKAKIALINDALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F L+QE LK ++ KI+ + NV+ V+K + AQ L I V
Sbjct: 258 RITSPEQLQAF---LEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I +I +++ LG EL + KV+ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+ EGC +L+RG + +V+ ++ AV + + +A GA ++ +K
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIK 421
>sp|O00782|TCPG_OXYGR T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3
SV=1
Length = 559
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
Query: 58 WLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHK 117
W +I +A +A V +D Y KV+ I G ES + GV+ K++ H
Sbjct: 168 WGNLIVDLAVKAVKSVYKKEGDYVEIDVKRYAKVEKIPGGLLEESVVLDGVMFNKDVTHP 227
Query: 118 RMTSQYRNPRLLILGGALEYQRVPNQLASFNT--------LLQQENDHLKMVISKIEALR 169
M NPR+++L LEY++ + T L+ +E + KM I ++
Sbjct: 228 GMRRYIENPRVVLLDCPLEYKKGESMTNMEFTKEEDFKKALMMEEEEVKKMCAEDILRVK 287
Query: 170 PNVLLVEKSVSSYAQDLLLA-KEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLG- 227
P+V++ EK VS AQ LL +++ +++ RIAR TGA I + + + +G
Sbjct: 288 PDVVITEKGVSDTAQHFLLKYGNCTVIRRIRKTDNNRIARVTGATIANRPEELQESDVGT 347
Query: 228 HCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQ 287
C LF+++K+ +E+ + C C +LLRG ++ L +++ +
Sbjct: 348 KCGLFEIKKIGDEY-------------FSFMTKCENPKACSILLRGASKDVLNEIERNLH 394
Query: 288 YAVFAAYHLSLETSFLADEGA 308
A+ A ++ + + GA
Sbjct: 395 DALGVARNVMVNPKLVPGGGA 415
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K + A ES ++GVV K + H RM + ++ ++ ALE ++
Sbjct: 198 DNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTETDAKI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P+QL SF L+QE LK ++ I NV+ V+K + AQ L I V
Sbjct: 258 NITSPDQLMSF---LEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++A+ TGA I ++ +++ LG+ E+ + K++ E+ ++
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAGEN-------------MI 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+ EGC +L+RG + +V+ ++ AV + + + L GA P++ L
Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGA--PEIELA 419
Query: 317 HSISK 321
S+ +
Sbjct: 420 ISVDE 424
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 34 FRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKC 93
F L S+ + AEG +L K II + N +P GG D +K+
Sbjct: 161 FTTLASKFI-AEGAELNK---------IIDMVIDAIVNVAEP-LPNGGYNVSLDLIKIDK 209
Query: 94 IAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQR----------VPNQ 143
GS +S +KG+V K + H M + ++ +L ALE ++ P Q
Sbjct: 210 KKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEISAKISITSPEQ 269
Query: 144 LASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLL 203
+ +F L +E+ +LK ++ K+ ++ NV++ +K + AQ L K I V VKR +
Sbjct: 270 IKAF---LDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDI 326
Query: 204 ERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPR 263
E++ + GA I SI + + LG+ EL EE N +++ EG
Sbjct: 327 EKLEKALGARIISSIKDATPEDLGYAELV------EERRVGND-------KMVFIEGAKN 373
Query: 264 RLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+LLRG L + + + A+ A ++ LE L GA ++ +K
Sbjct: 374 LKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMK 426
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 34 FRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVKVKC 93
F L S+ + AEG +L K II + N +P GG D +K+
Sbjct: 161 FTTLASKFI-AEGAELNK---------IIDMVIDAIVNVAEP-LPNGGYNVSLDLIKIDK 209
Query: 94 IAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQR----------VPNQ 143
GS +S +KG+V K + H M + ++ +L ALE ++ P Q
Sbjct: 210 KKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEISAKISITSPEQ 269
Query: 144 LASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLL 203
+ +F L +E+ +LK ++ K+ ++ NV++ +K + AQ L K I V VKR +
Sbjct: 270 IKAF---LDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDI 326
Query: 204 ERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPR 263
E++ + GA I SI + + LG+ EL EE N +++ EG
Sbjct: 327 EKLEKALGARIISSIKDATPDDLGYAELV------EERRVGND-------KMVFIEGAKN 373
Query: 264 RLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+LLRG L + + + A+ A ++ LE L GA ++ +K
Sbjct: 374 LKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMK 426
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 89 VKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV-------- 140
+KV GS N++ FI G+V K H +M +N ++ ++ ALE ++
Sbjct: 197 IKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQI 256
Query: 141 --PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNV 198
P+++ F L QE + K ++ KI+ NV+L +K + AQ L + I V V
Sbjct: 257 SDPSKIQDF---LNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRV 313
Query: 199 KRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYF 258
K+ +E++A+ TGA I +D+++ + LG E + K+ ++ T +
Sbjct: 314 KKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMT-------------FV 360
Query: 259 EGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
GC +L+RG + +V+ + A+ + FL GA ++ ++
Sbjct: 361 MGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMR 418
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 26/265 (9%)
Query: 62 ITTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTS 121
I + A + V GG P D +K+ GS +S + G+V K + H M
Sbjct: 179 IMNMVIDAVSIVAEPLPEGGYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPR 238
Query: 122 QYRNPRLLILGGALEYQR----------VPNQLASFNTLLQQENDHLKMVISKIEALRPN 171
+ ++ +L ALE ++ P Q+ +F L +E +LK ++ K+ ++ N
Sbjct: 239 RVEKAKIAVLDAALEVEKPEISAKISITSPEQIKAF---LDEEAKYLKDMVDKLASIGAN 295
Query: 172 VLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCEL 231
V++ +K + AQ L K I V VKR +E++ + GA I SI + + LG+ EL
Sbjct: 296 VVICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAEL 355
Query: 232 FKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVF 291
EE N +++ EG +LLRG L + + + A+
Sbjct: 356 V------EERRVGND-------KMVFIEGAKNPKAVNILLRGSNDMALDEAERSINDALH 402
Query: 292 AAYHLSLETSFLADEGATLPKMRLK 316
+ ++ ++ +A GA ++ L+
Sbjct: 403 SLRNVLMKPMIVAGGGAVETELALR 427
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 62 ITTIAWQAANFVK--PDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRM 119
I +A A N VK + S G DY+K++ GS E+ + G+V K + H M
Sbjct: 171 IDKLAEIAVNAVKMIAEESNGQVEVNTDYIKIEKRQGGSIEETELVDGIVLDKEVVHPGM 230
Query: 120 TSQYRNPRLLILGGALEYQRV----------PNQLASFNTLLQQENDHLKMVISKIEALR 169
+ N ++L+L ALE + P +L F ++QE LK ++ KI
Sbjct: 231 PKRVENAKILLLDSALEVKETEIDAKIRITDPEKLQKF---IEQEEAMLKEMVDKIVNAG 287
Query: 170 PNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHC 229
NV+ +K + AQ L + V VK+ +E++A+ TGA + + +IS+ LG
Sbjct: 288 ANVVFCQKGIDDLAQYYLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEA 347
Query: 230 ELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289
L + KV +E +++ GC +L+RG ++++ ++ A
Sbjct: 348 ALVEERKVGDEK-------------MVFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDA 394
Query: 290 VFA 292
V A
Sbjct: 395 VRA 397
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 69 AANFVKPDTSRGGSMDPGDYVKVKCIAK--GSPNESTFIKGVVCTKNIKHKRMTSQYRNP 126
A VK + G + D ++ I K G+ +S + G+V K + H M + N
Sbjct: 162 AVKAVKQVVEKRGDKNYVDLDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENA 221
Query: 127 RLLILGGALEYQRV----------PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVE 176
++++L LE ++ P QL F LQQE + L ++ KI ++ NV++ +
Sbjct: 222 KIVLLDAPLEIEKPEIDAEIRINDPEQLEKF---LQQEEEILMKMVDKIASVGANVVVCQ 278
Query: 177 KSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEK 236
K + AQ L K I V VKR LE++ R TG I +I++++ LG+ L + K
Sbjct: 279 KGIDEVAQHFLAKKGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERK 338
Query: 237 VSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRG 273
V E+ +++ EGC +++RG
Sbjct: 339 VGEDK-------------MVFIEGCKNPRSVSIVIRG 362
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D +K++ GS ++ + G+V K + H M + +N ++ +L ALE +
Sbjct: 198 DNIKLEKRQGGSVADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKETETDAEI 257
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P+QL F ++QE LK ++ ++ NV+ +K + AQ L I V
Sbjct: 258 RITDPDQLMKF---IEQEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQYYLAKAGILAVR 314
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E+IA+ GA I + I++ LG EL + KV +E ++
Sbjct: 315 RVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEK-------------MV 361
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAV 290
+ EGC +L+RG + +V+ +Q A+
Sbjct: 362 FIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAI 395
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 31/296 (10%)
Query: 31 QGHFRALVSELLRAEGIKLGKEDSEEDWLGIITTIAWQAANFVKPDTSRGGSMDPGDYVK 90
+ + +VS + ++ I G E+ ++ I + A V G P D +K
Sbjct: 153 KAQLKKIVSTTMSSKFIAGGAEEIDK-----IIDLVIDAITIVAEKRPDGTYNVPLDLIK 207
Query: 91 VKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQR----------V 140
+ GS +S + G+V K + H M + ++ +L ALE ++
Sbjct: 208 IDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKAKIAVLDAALEVEKPEISAKISITS 267
Query: 141 PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKR 200
P Q+ SF L +E +LK ++ K+ ++ NV++ +K + AQ L K I V VKR
Sbjct: 268 PEQIKSF---LDEEARYLKEMVDKLASIGANVVICQKGIDDVAQHFLAKKGILAVRRVKR 324
Query: 201 PLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEG 260
+E++ + GA I SI + + LG+ EL EE N +++ EG
Sbjct: 325 SDIEKLEKALGARIISSIKDATPEDLGYAELV------EERRIGND-------KMVFIEG 371
Query: 261 CPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRLK 316
+LLRG L + + + A+ + ++ ++ +A GA ++ L+
Sbjct: 372 AKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALR 427
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 97 GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV----------PNQLAS 146
GS N++ + G+V K + H M + N ++ +L +LE ++ P Q+
Sbjct: 214 GSINDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELDAEIRINDPTQMHK 273
Query: 147 FNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERI 206
F L++E + LK + KI A NV++ +K + AQ L K I V K+ LE++
Sbjct: 274 F---LEEEENILKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKL 330
Query: 207 ARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRL 265
AR TG + +ID +++ LG+ L + KV E+ + K P + G R+
Sbjct: 331 ARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMVFVEGAKNPKSVSILIRGGLERV 389
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 97 GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV----------PNQLAS 146
GS N++ + G+V K + H M + N ++ +L +LE ++ P Q+
Sbjct: 214 GSVNDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELDAEIRINDPTQMHK 273
Query: 147 FNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERI 206
F L++E + LK + KI A NV++ +K + AQ L K I V K+ LE++
Sbjct: 274 F---LEEEENILKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKL 330
Query: 207 ARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRL 265
AR TG + +ID +++ LG+ L + KV E+ + K P + G R+
Sbjct: 331 ARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMVFVEGAKNPKSVSILIRGGLERV 389
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 97 GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQR----------VPNQLAS 146
GS ++ ++G+V K + H M + N R+ +L LE ++ P Q+
Sbjct: 215 GSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEIDLEISITSPEQI-- 272
Query: 147 FNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERI 206
L +++ L+ I KI A NV++ +K + AQ L K I V VKR +E+I
Sbjct: 273 -KALYEKQERILQEKIEKIAATGANVVITQKGIDDVAQHFLAKKGILAVRRVKRSDIEKI 331
Query: 207 ARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRL 265
AR TGA I I+++ LG+ EL + KV E+ + K P + G RL
Sbjct: 332 ARATGARIVTDIEDLRPEDLGYAELVEERKVGEDKMVFIEGAKNPKSVTILLRGGFERL 390
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D++K++ G ++ +KG+V K H M + N ++ +L +E +
Sbjct: 200 DHIKLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETDAEI 259
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P QL +F +++E L ++ KI NV+ +K + AQ L K I V
Sbjct: 260 RITDPEQLQAF---IEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHYLAKKGILAVR 316
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ ++++AR TGA I +ID++S LG E+ + +KV+ ++
Sbjct: 317 RVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVA-------------GDKMI 363
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAV 290
+ EGC +L+RG + + + ++ A+
Sbjct: 364 FVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAI 397
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 97 GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV----------PNQLAS 146
GS N++ + G++ K + H M + N ++ +L +LE ++ P Q+
Sbjct: 215 GSINDTQIVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEKPELDAEIRINDPTQMKK 274
Query: 147 FNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERI 206
F L +E + LK + KI NV++ +K + AQ L K I V K+ LE++
Sbjct: 275 F---LDEEENILKEKVDKIAQTGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKL 331
Query: 207 ARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLG 266
AR TG + +ID +++ LG+ L + K+ E+ +++ EG
Sbjct: 332 ARATGGRVVSNIDELTSQDLGYATLVEERKIGEDK-------------MVFIEGAKNPKA 378
Query: 267 CMVLLRG 273
+L+RG
Sbjct: 379 VSILIRG 385
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 87 DYVKVKCIAK--GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV---- 140
D+ ++ + K G+ +++ I G++ K H M ++ ++ +L LE ++
Sbjct: 194 DFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDT 253
Query: 141 ------PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISL 194
P+ + F L QE + L+ ++ KI+++ NV++ +K + AQ L I
Sbjct: 254 NLRIEDPSMIQKF---LAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYA 310
Query: 195 VLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKT 254
V VK+ ++++A+ TGA I +ID IS++ LG E + KV E++ T
Sbjct: 311 VRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMT----------- 359
Query: 255 LMYFEGCPRRLGCMVLLRGKC 275
+ GC +L+RG+
Sbjct: 360 --FVTGCKNPKAVSILVRGET 378
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 29/240 (12%)
Query: 81 GSMDPGDYVKVKCIAKGSPNEST-FIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQR 139
G +D D +KV+ +G+P E T I+GVV K + +M + N ++ +L +E +
Sbjct: 190 GKVDK-DLIKVEK-KEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKE 247
Query: 140 V----------PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLA 189
P +L F ++QE +K ++ KI A NV+ +K + AQ L
Sbjct: 248 TETDAEIRITDPAKLMEF---IEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAK 304
Query: 190 KEISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNK 249
K I V VK+ +E++A+ TGA I ID+++ LG L + KV+
Sbjct: 305 KGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVA----------- 353
Query: 250 KPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGAT 309
+++ E C +L RG +++V + A+ E +A GAT
Sbjct: 354 --GDAMIFVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGAT 411
>sp|Q8SR76|TCPG_ENCCU T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CCT3 PE=1 SV=1
Length = 519
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 84 DPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQ 143
D + +KV+ + G+ ES + GV+ K+I H +M NPR++I+ LEY++ +Q
Sbjct: 189 DLKNNMKVEKVLGGNLMESEVVDGVLINKDIIHPQMRRVIENPRIVIIESPLEYKKGESQ 248
Query: 144 L-------ASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
F L+ E + ++ + +I +RP++++ EK +S A +L I+ +
Sbjct: 249 TNYEFSKENDFTRALEIEEEQVREMCERIIGVRPDIVVCEKGISDLALSILFENNITGLR 308
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLG-HCELFKLEKVSEEHETSNQFNKKPSKTL 255
+K+ + R+++ GA +++ +G C LF+ K EE+
Sbjct: 309 RLKKTDISRLSKVCGARSVSRPEDLEERHVGVSCGLFEYIKYGEEYYCK----------- 357
Query: 256 MYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGATLPKMRL 315
F C C V++RG ++ L +++ AV A + + GA +M +
Sbjct: 358 --FSRCAHPKACSVVIRGPTKDILDELERNFMDAVKVAKSIFISPKLCPGGGAA--EMAM 413
Query: 316 KHSISKPERMMADNAISAIPSSKVAA 341
H + + DN + A S++A+
Sbjct: 414 AHELMQS---AGDNEVEAEVFSRMAS 436
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV------ 140
D++K++ + ++ST ++GV+ K H M + N ++ +L +E +
Sbjct: 191 DHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEVDAEI 250
Query: 141 ----PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVL 196
P+Q+ +F ++QE ++ +++ I NVL +K + AQ L + V
Sbjct: 251 RITDPSQMQAF---IEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQHYLAKAGVLAVR 307
Query: 197 NVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLM 256
VK+ +E++++ TGA I +I+++S LG + +K+S E ++
Sbjct: 308 RVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISGEE-------------MI 354
Query: 257 YFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGA 308
+ E C +L+RG + +V+ ++ A+ + +A GA
Sbjct: 355 FVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGA 406
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 97 GSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVPNQLASFNTLLQQEND 156
GS N++ I G+V K + H M + N ++ +L +LE ++ P A ND
Sbjct: 215 GSINDTQIIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEK-PELDAEIRI-----ND 268
Query: 157 HLKM-------------VISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLL 203
+M + KI A NV++ +K + AQ L K I V K+ L
Sbjct: 269 PTQMKKFLEEEENLLKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDL 328
Query: 204 ERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPR 263
E++AR TG + +ID ++ LG+ L + KV E+ + K P + G
Sbjct: 329 EKLARATGGRVVSNIDELTPQDLGYAALVEERKVGEDKMVFVEGAKNPKAVSILIRGGLE 388
Query: 264 RL 265
R+
Sbjct: 389 RV 390
>sp|P87153|TCPH_SCHPO Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct7 PE=1 SV=1
Length = 558
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 87 DYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQ---YRNPRLLILGGALEYQ----- 138
+ + +K + G+ +S +KGV K + Q ++NP++L L LE +
Sbjct: 198 NMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCLDVELELKAEKDN 257
Query: 139 ---RVPNQLASFNTLLQQENDHLKMVISKIEALRPN---VLLVEKSVSSYAQDLLLAKEI 192
RV +++ + ++ E +++ SK+EA+ V+L + + A ++I
Sbjct: 258 AEVRV-DKVQEYQNIVDAE---WRIIFSKLEAIVATGAKVVLSKLPIGDLATQYFADRDI 313
Query: 193 SLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPS 252
V L R+ + G I + NI LG C+ F+ E ++FN
Sbjct: 314 FCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLGTCDTFE-----ERQIGGDRFN---- 364
Query: 253 KTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLETSFLADEGA 308
FEGCP+ C ++LRG + + +V+ + A+ H +A GA
Sbjct: 365 ----LFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGA 416
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 81 GSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRV 140
G +D D +K++ S +E+ I GV+ K +M + N ++ +L +E +
Sbjct: 188 GKVDK-DLIKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKET 246
Query: 141 ----------PNQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAK 190
P +L F ++QE LK ++ I+A NVL +K + AQ L +
Sbjct: 247 ETDAEIRITDPTKLMEF---IEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLAKE 303
Query: 191 EISLVLNVKRPLLERIARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKK 250
I V VK+ +E++++ TGA + +I ++ LG + + K++
Sbjct: 304 GILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIA------------ 351
Query: 251 PSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAV 290
+++ E C +L+RG +++V V A+
Sbjct: 352 -GDAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAI 390
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 452,346,003
Number of Sequences: 539616
Number of extensions: 19056823
Number of successful extensions: 53010
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 52660
Number of HSP's gapped (non-prelim): 371
length of query: 1247
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1118
effective length of database: 121,958,995
effective search space: 136350156410
effective search space used: 136350156410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)