Query 000863
Match_columns 1247
No_of_seqs 359 out of 1745
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 16:15:31 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000863.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_633-637//hhsearch_pdb/000863hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_G T-complex protein 1 sub 1.0 1 1 446.1 30.8 297 3-313 84-406 (515)
2 3aq1_B Thermosome subunit; gro 1.0 1 1 427.6 25.8 297 3-313 48-369 (500)
3 1a6d_B Thermosome (beta subuni 1.0 1 1 426.6 27.1 296 3-313 96-416 (543)
4 3iyg_Z T-complex protein 1 sub 1.0 1 1 425.0 27.8 292 3-313 85-410 (517)
5 3iyg_A T-complex protein 1 sub 1.0 1 1 424.3 31.4 296 3-313 85-413 (529)
6 1q3q_A Thermosome alpha subuni 1.0 1 1 424.1 29.7 296 3-313 98-418 (548)
7 3p9d_F T-complex protein 1 sub 1.0 1 1 423.6 14.7 294 3-313 92-422 (546)
8 3ko1_A Chaperonin; 9-fold symm 1.0 1 1 421.0 26.2 296 3-313 105-425 (553)
9 1a6d_A Thermosome (alpha subun 1.0 1 1 420.2 27.0 296 3-313 97-415 (545)
10 3ruv_A Chaperonin, CPN; double 1.0 1 1 420.1 27.2 293 3-313 94-411 (543)
No 1
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=1.00 E-value=1 Score=446.09 Aligned_cols=297 Identities=23% Similarity=0.393 Sum_probs=273.0
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH------------------HCCCCCCCCCHHHHHHHHHH
Q ss_conf 852054350357787743089996999999999999999998------------------48767667890027989999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRA------------------EGIKLGKEDSEEDWLGIITT 64 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~------------------~~i~~~~k~~~~~W~~~l~~ 64 (1247)
+++++|||||++++..++++|+||..|+.||.+|+...+..+ +.+++++|. ...|.+.+++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~-i~~~~~~~~~ 162 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKV-ISRWSSLACN 162 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC-HHHHHHHHHH
T ss_conf 249999999999999999879988999999999999999999985045688889999999998714875-2557999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC---
Q ss_conf 99999862288888999889668537998238997863259658993125789993011497199960002334586---
Q 000863 65 IAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP--- 141 (1247)
Q Consensus 65 l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~--- 141 (1247)
++++|+..|.++......+|+.+||+|+|++||++.||++|+|++|+|++.|++||++++||||||++|+|||++.+
T Consensus 163 i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~ 242 (515)
T 3iyg_G 163 IALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQT 242 (515)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
T ss_conf 99999984233568885456423058998369980101688417982787898886144410799981555444234674
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCC
Q ss_conf ----7888999999999999999999999539997985478788999999985953570379488999999969927267
Q 000863 142 ----NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPS 217 (1247)
Q Consensus 142 ----~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iiss 217 (1247)
+...++++++++|++|++++|++|++.||+||+++++|+++|+++|.++||++++++++.+|+|||++|||.|+++
T Consensus 243 ~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~ 322 (515)
T 3iyg_G 243 DIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSR 322 (515)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCEEECC
T ss_conf 28967899999999999999999999999479989997886678999999878956666678899999999959926421
Q ss_pred CCCCCCCCCEE-EEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77899998324-43799999516322233457888615999985799854899964799989999999999999999995
Q 000863 218 IDNISTTRLGH-CELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHL 296 (1247)
Q Consensus 218 id~L~~~~LG~-C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l 296 (1247)
++++++..||+ |+.|+++++++ ++|+||+||+++.+|||+|||+++.+|+|+||+++||+++++++
T Consensus 323 l~~l~~~~LG~~a~~v~~~~~g~-------------~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 323 PEELREEDVGTGAGLLEIKKIGD-------------EYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred CCCCCHHHCCCCCCEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02367666287562899999878-------------16999957888876899984898899999999999999999999
Q ss_pred HHCCEEEECCCCCCCCC
Q ss_conf 61491760798445444
Q 000863 297 SLETSFLADEGATLPKM 313 (1247)
Q Consensus 297 ~lE~~~l~ggGa~e~~~ 313 (1247)
..++++|+||||+|.+.
T Consensus 390 ~~~~~ivpGGGa~e~~~ 406 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAV 406 (515)
T ss_pred HHCCCEEECCCHHHHHH
T ss_conf 62896893788999999
No 2
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=1.00 E-value=1 Score=427.63 Aligned_cols=297 Identities=20% Similarity=0.309 Sum_probs=271.7
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH------------------HHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 8520543503577877430899969999999999999999------------------9848767667890027989999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELL------------------RAEGIKLGKEDSEEDWLGIITT 64 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl------------------~~~~i~~~~k~~~~~W~~~l~~ 64 (1247)
+++++|||+|++++..++++|+||..|+.|+.+|+...+. +.+.+++++|.. ..|.+.|++
T Consensus 48 TtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~-~~~~~~i~~ 126 (500)
T 3aq1_B 48 TTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGA-EAYKEKLSA 126 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSST-TSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC-CCCHHHHHH
T ss_conf 7899999999999999998799989999999999999999999826888887678999999998623113-555789999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC---
Q ss_conf 99999862288888999889668537998238997863259658993125789993011497199960002334586---
Q 000863 65 IAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP--- 141 (1247)
Q Consensus 65 l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~--- 141 (1247)
|+++|+..|.++......+|+.++|+|+|++||+..||++++|++|+|++.|+.||++++||||||++++|||++.+
T Consensus 127 li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~ 206 (500)
T 3aq1_B 127 LTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDS 206 (500)
T ss_dssp HHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE
T ss_conf 99999999613346874445112279998358980011788226994057889985443598799993776666544632
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCC
Q ss_conf ----7888999999999999999999999539997985478788999999985953570379488999999969927267
Q 000863 142 ----NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPS 217 (1247)
Q Consensus 142 ----~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iiss 217 (1247)
+...+++.++++|++|++.++++|++.|++||+++++|++.|+++|.++||++++++++.+|+|||++|||.++++
T Consensus 207 ~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~ 286 (500)
T 3aq1_B 207 EIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQD 286 (500)
T ss_dssp ------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSC
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCEEECC
T ss_conf 47648999999999999999999999999749399998777677999999878989997279999999999849957456
Q ss_pred CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77899998324437999995163222334578886159999857998548999647999899999999999999999956
Q 000863 218 IDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLS 297 (1247)
Q Consensus 218 id~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l~ 297 (1247)
++++++..||+|+.|++++++. ++++||+||+++..|||+|||+++.+|+|+||+++||+++++++.
T Consensus 287 l~~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 287 LDQITTEDVGTAGLVEEKEVRG-------------GKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp TTCCCSTTCEEEEEEEEEECSS-------------SEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCEEEEEEEECC-------------EEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0118986788760899998457-------------689999778887569999358967799999999998999999999
Q ss_pred HCCEEEECCCCCCCCC
Q ss_conf 1491760798445444
Q 000863 298 LETSFLADEGATLPKM 313 (1247)
Q Consensus 298 lE~~~l~ggGa~e~~~ 313 (1247)
.|+++|+|||++|...
T Consensus 354 ~~~~iVpGGGa~e~~~ 369 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVEL 369 (500)
T ss_dssp HHSEEEETTTHHHHHH
T ss_pred HCCCCCCCCCHHHHHH
T ss_conf 7888788872999999
No 3
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=1.00 E-value=1 Score=426.57 Aligned_cols=296 Identities=20% Similarity=0.301 Sum_probs=271.3
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC------------------CCCCCCCCHHHHHHHHHH
Q ss_conf 85205435035778774308999699999999999999999848------------------767667890027989999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEG------------------IKLGKEDSEEDWLGIITT 64 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~~~------------------i~~~~k~~~~~W~~~l~~ 64 (1247)
+++++|||+|++++..++++|+||..|+.|+.+|+...+..+.. +++++|. ...|.+.|++
T Consensus 96 TtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi-~~~~~~~i~~ 174 (543)
T 1a6d_B 96 TTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKS-ASVAKDKLAE 174 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSG-GGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC-CCCCHHHHHH
T ss_conf 589999999999999999779998999999999999999999982688899877999999999852542-4454779999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC---
Q ss_conf 99999862288888999889668537998238997863259658993125789993011497199960002334586---
Q 000863 65 IAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP--- 141 (1247)
Q Consensus 65 l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~--- 141 (1247)
|+++|+..|.++......+|+ ++|+|+|++||+..||++++|++|+|++.|+.||++++||||||++++|||++.+
T Consensus 175 livdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~ 253 (543)
T 1a6d_B 175 ISYEAVKSVAELRDGKYYVDF-DNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDT 253 (543)
T ss_dssp HHHHHHHHHEEECSSSEEECG-GGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEE
T ss_pred HHHHHHHHHCCCCCCCCCCCC-CEEEEEEECCCCCCCEEEECCEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCC
T ss_conf 999999984533368744334-4489998368981222687348983177888875331387699992455644345774
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCC
Q ss_conf ----7888999999999999999999999539997985478788999999985953570379488999999969927267
Q 000863 142 ----NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPS 217 (1247)
Q Consensus 142 ----~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iiss 217 (1247)
+...+++.++++|++|++.++++|++.|++||+++++|++.|+++|.++||++++++++.+|+|||++|||.++++
T Consensus 254 ~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~ 333 (543)
T 1a6d_B 254 NLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVST 333 (543)
T ss_dssp EECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESC
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCEECC
T ss_conf 38968899999999999999999999999729989998888688999999878966864689999999999829926555
Q ss_pred CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77899998324437999995163222334578886159999857998548999647999899999999999999999956
Q 000863 218 IDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLS 297 (1247)
Q Consensus 218 id~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l~ 297 (1247)
++++++..||+|+.|++++++. ++|+||+||+++.+|||+|||+++.+|+|+||+++||+++++++.
T Consensus 334 l~~l~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~ 400 (543)
T 1a6d_B 334 IDEISSSDLGTAERVEQVKVGE-------------DYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASAL 400 (543)
T ss_dssp GGGCCGGGCEEEEEEEEEEETT-------------EEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1449987788763899999668-------------149999668887559999657977799999999999999999999
Q ss_pred HCCEEEECCCCCCCCC
Q ss_conf 1491760798445444
Q 000863 298 LETSFLADEGATLPKM 313 (1247)
Q Consensus 298 lE~~~l~ggGa~e~~~ 313 (1247)
.|+++|+||||+|...
T Consensus 401 ~~~~ivpGGGa~e~~~ 416 (543)
T 1a6d_B 401 EDGAYAAGGGATAAEI 416 (543)
T ss_dssp HHCEEEETTTHHHHHH
T ss_pred HCCCCCCCCCHHHHHH
T ss_conf 7888167864999999
No 4
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=1.00 E-value=1 Score=425.05 Aligned_cols=292 Identities=17% Similarity=0.269 Sum_probs=268.3
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----------------HHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 85205435035778774308999699999999999999999-----------------8487676678900279899999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLR-----------------AEGIKLGKEDSEEDWLGIITTI 65 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~-----------------~~~i~~~~k~~~~~W~~~l~~l 65 (1247)
+++++|||+|++++..++++|+||..|+.|+.+|+...+.. .+.+++++|.. ..|.+.|+++
T Consensus 85 TtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~-~~~~d~la~l 163 (517)
T 3iyg_Z 85 TSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVH-AELADVLTEA 163 (517)
T ss_pred EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC-HHHHHHHHHH
T ss_conf 248999999999999998657799999999999999999999851767789889999999987045542-0478899999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC----
Q ss_conf 9999862288888999889668537998238997863259658993125789993011497199960002334586----
Q 000863 66 AWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP---- 141 (1247)
Q Consensus 66 ~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~---- 141 (1247)
+++|+..|.+. +..+|+ ++|+|+|++||...||++++|++|+|+..|+.||++++|||||+++++|||+|.+
T Consensus 164 ~vdaV~~V~~~---~~~~dl-~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~ 239 (517)
T 3iyg_Z 164 VVDSILAIKKQ---DEPIDL-FMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSG 239 (517)
T ss_pred HHHHHHEECCC---CCCCCH-HHHEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEE
T ss_conf 99886033147---876773-57136651488732000575479832577877643223874999536655554445416
Q ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------EEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHH
Q ss_conf ---788899999999999999999999953999---------79854787889999999859535703794889999999
Q 000863 142 ---NQLASFNTLLQQENDHLKMVISKIEALRPN---------VLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARC 209 (1247)
Q Consensus 142 ---~~~~sle~ii~qE~e~L~~~V~kI~~~~pn---------VVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~ 209 (1247)
+...+++.++++|++|++..+++|+.++++ ||+++++|+++|+++|.++||++++++++.+|+|||++
T Consensus 240 ~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~ 319 (517)
T 3iyg_Z 240 FFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLA 319 (517)
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 99689999999999999999999999998505554125786389735667879999999879879982579999999998
Q ss_pred HCCEECCCCCCCCCCC-CEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 6992726777899998-324437999995163222334578886159999857998548999647999899999999999
Q 000863 210 TGALITPSIDNISTTR-LGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQY 288 (1247)
Q Consensus 210 TGA~Iissid~L~~~~-LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~d 288 (1247)
|||.++++++++++.. ||+|+ |+++++++ ++++||+||+++.+|||+|||+++.+|+|+||+++|
T Consensus 320 tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~D 385 (517)
T 3iyg_Z 320 CGGIALNSLDDLNPDCLLGHAG-VYEYTLGE-------------EKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRD 385 (517)
T ss_pred HCCEEECCHHHCCCCCCCCCCE-EEEEEECC-------------CEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHHH
T ss_conf 6997854534275000477514-99999768-------------258999478983344343148867899999999998
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 9999999561491760798445444
Q 000863 289 AVFAAYHLSLETSFLADEGATLPKM 313 (1247)
Q Consensus 289 ai~v~~~l~lE~~~l~ggGa~e~~~ 313 (1247)
|+++++++..|+++|+||||+|.+.
T Consensus 386 Al~~~r~av~~~~iVpGGGa~e~~~ 410 (517)
T 3iyg_Z 386 GLRAVKNAIDDGCVVPGAGAVEVAM 410 (517)
T ss_pred HHHHHHHHHHCCEEECCCCHHHHHH
T ss_conf 8999999973661854862899999
No 5
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=1.00 E-value=1 Score=424.27 Aligned_cols=296 Identities=18% Similarity=0.191 Sum_probs=268.0
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC-CC------------------CCCCCCHHHHHHHHH
Q ss_conf 85205435035778774308999699999999999999999848-76------------------766789002798999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEG-IK------------------LGKEDSEEDWLGIIT 63 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~~~-i~------------------~~~k~~~~~W~~~l~ 63 (1247)
+++++|||+|++++..++++|+||..|+.|+.+|+...+..+.. ++ +++|.. ..|.+.|+
T Consensus 85 TtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~-~~~~~~i~ 163 (529)
T 3iyg_A 85 TSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVI-GINGDFFA 163 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCHHHHH
T ss_conf 02999999999999999987999999999999999999999987426078889989999999998566755-32078999
Q ss_pred HHHHHHHHHCCCCCCCC-CCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC-
Q ss_conf 99999986228888899-9889668537998238997863259658993125789993011497199960002334586-
Q 000863 64 TIAWQAANFVKPDTSRG-GSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP- 141 (1247)
Q Consensus 64 ~l~~~Av~~v~~d~~~~-~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~- 141 (1247)
+|+++|+..|.+....+ ..+|+ ++|+|++++||++.||++++|++|+|++.|+.||++++||||++++|+|||++.+
T Consensus 164 ~livdAv~~V~~~~~~g~~~~dv-~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e~ 242 (529)
T 3iyg_A 164 NLVVDAVLAIKYTDIRGQPRYPV-NSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKL 242 (529)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCC-CEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 99999999975124478766654-41799995598855438996168745864356875168866999627765453567
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEEC
Q ss_conf ------78889999999999999999999995399979854787889999999859535703794889999999699272
Q 000863 142 ------NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALIT 215 (1247)
Q Consensus 142 ------~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Ii 215 (1247)
+...+++.+.++|++|++.++++|++.|+|||+++++|+++|+++|.++||++++++++.+|+|||++|||.++
T Consensus 243 ~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv 322 (529)
T 3iyg_A 243 GVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVL 322 (529)
T ss_pred CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCEEE
T ss_conf 85499689999999999999999999999995499899987887789999999869803634798889999998599566
Q ss_pred CCCCCCC------CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 6777899------9983244379999951632223345788861599998579985489996479998999999999999
Q 000863 216 PSIDNIS------TTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYA 289 (1247)
Q Consensus 216 ssid~L~------~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~da 289 (1247)
++++.+. +.+||+|+.|++++++. ++|+||+||+++.+|||+|||+++.+|+|+||+++||
T Consensus 323 ~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Da 389 (529)
T 3iyg_A 323 STLANLEGEETFEASMLGQAEEVVQERICD-------------DELILIKNTKARTSASVILRGANDFMCDEMERSLHDA 389 (529)
T ss_pred CCHHCCCCHHCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 140104531005763376543899998679-------------5399997579986589997786277999999999999
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 999999561491760798445444
Q 000863 290 VFAAYHLSLETSFLADEGATLPKM 313 (1247)
Q Consensus 290 i~v~~~l~lE~~~l~ggGa~e~~~ 313 (1247)
+++++++..++++|+||||+|.+.
T Consensus 390 l~v~r~~v~~~~iVpGGGa~E~~l 413 (529)
T 3iyg_A 390 LCVVKRVLESKSVVPGGGAVEAAL 413 (529)
T ss_pred HHHHHHHHHCCEEEECCCHHHHHH
T ss_conf 999999963890884786799999
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=1.00 E-value=1 Score=424.13 Aligned_cols=296 Identities=21% Similarity=0.323 Sum_probs=272.2
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH------------------HHCCCCCCCCCHHHHHHHHHH
Q ss_conf 85205435035778774308999699999999999999999------------------848767667890027989999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLR------------------AEGIKLGKEDSEEDWLGIITT 64 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~------------------~~~i~~~~k~~~~~W~~~l~~ 64 (1247)
+++++|||+|++++..++++++||..|+.|+.+|+...+.. .+.+++++|.. ..|.+.|++
T Consensus 98 TtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~-~~~~~~i~~ 176 (548)
T 1q3q_A 98 TTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNA-ESHKELLAK 176 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTT-GGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC-CCCHHHHHH
T ss_conf 3899999999999999998799889999999999999999999845888887789999999987503002-455579999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC---
Q ss_conf 99999862288888999889668537998238997863259658993125789993011497199960002334586---
Q 000863 65 IAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP--- 141 (1247)
Q Consensus 65 l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~--- 141 (1247)
|+++|+..|.++......+|+ ++|+|+|++||+..||++++|++|+|++.|+.||++++||||||++++|||++.+
T Consensus 177 livdAv~~V~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~ 255 (548)
T 1q3q_A 177 LAVEAVKQVAEKKDGKYVVDL-DNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDA 255 (548)
T ss_dssp HHHHHHHHHCEESSSSEECCG-GGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCC-CEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCC
T ss_conf 999999984434578754557-7389999448983023897108984157789985651488799992676754346784
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCC
Q ss_conf ----7888999999999999999999999539997985478788999999985953570379488999999969927267
Q 000863 142 ----NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPS 217 (1247)
Q Consensus 142 ----~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iiss 217 (1247)
+...+++.++++|++|++.++++|++.|++||+++++|++.|+++|.++||++|+++++.+|+|||++|||.++++
T Consensus 256 ~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~ 335 (548)
T 1q3q_A 256 KINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTN 335 (548)
T ss_dssp CEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSS
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCEEECC
T ss_conf 39968899999999999999999999999859699998678588999999987957873379999999999859947555
Q ss_pred CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77899998324437999995163222334578886159999857998548999647999899999999999999999956
Q 000863 218 IDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLS 297 (1247)
Q Consensus 218 id~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l~ 297 (1247)
++++++..||+|+.|++++++. ++|+||+||+++..|||+|||+++.+|+|+||+++||+++++++.
T Consensus 336 l~~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~ 402 (548)
T 1q3q_A 336 VKDLTPEDLGYAEVVEERKLAG-------------ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVM 402 (548)
T ss_dssp GGGCCGGGCEEESEEEEEEETT-------------EEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2549987788763899999668-------------339999658999769999778976789999999997999999999
Q ss_pred HCCEEEECCCCCCCCC
Q ss_conf 1491760798445444
Q 000863 298 LETSFLADEGATLPKM 313 (1247)
Q Consensus 298 lE~~~l~ggGa~e~~~ 313 (1247)
.|+++|+|||++|...
T Consensus 403 ~~~~ivpGGGa~e~~~ 418 (548)
T 1q3q_A 403 EDGAVLPAGGAPEIEL 418 (548)
T ss_dssp HSCEEEECTTHHHHHH
T ss_pred HCCCCCCCCCHHHHHH
T ss_conf 7788056875999999
No 7
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=1.00 E-value=1 Score=423.62 Aligned_cols=294 Identities=21% Similarity=0.295 Sum_probs=266.7
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC--------------------CCCCCCCHHHHHHHH
Q ss_conf 852054350357787743089996999999999999999998487--------------------676678900279899
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGI--------------------KLGKEDSEEDWLGII 62 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~~~i--------------------~~~~k~~~~~W~~~l 62 (1247)
+++++|||+|++++..++++|+||..|+.|+.+|+...+..+..+ ++++|. ...|.+.|
T Consensus 92 TtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi-~~~~~d~l 170 (546)
T 3p9d_F 92 TTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKV-DADLTEVL 170 (546)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTT-HHHHCSSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC-CHHHHHHH
T ss_conf 10999999999999999867998689999999999999999997005555665688999999999817876-44599999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC-
Q ss_conf 9999999862288888999889668537998238997863259658993125789993011497199960002334586-
Q 000863 63 TTIAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP- 141 (1247)
Q Consensus 63 ~~l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~- 141 (1247)
++++++|+..|.+. .+..+|+ ++|+|+|++||...||++++|++|+|++.|++||++++||||||++|+|||+|.+
T Consensus 171 a~l~vdaV~~V~~~--~~~~~dl-~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~ 247 (546)
T 3p9d_F 171 TPIVTDAVLSVYDA--QADNLDL-HMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEV 247 (546)
T ss_dssp HHHHHHHHHHTHHH--HHTTCCG-GGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSS
T ss_pred HHHHHHHHEEEECC--CCCCCCC-HHEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEECCCEEEEECCCCCCCCCCC
T ss_conf 99998862574037--8986662-02699995588712127986699824666556752630766999627666554556
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHHHHHHHCC----------CCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHH
Q ss_conf ------7888999999999999999999999539----------997985478788999999985953570379488999
Q 000863 142 ------NQLASFNTLLQQENDHLKMVISKIEALR----------PNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLER 205 (1247)
Q Consensus 142 ------~~~~sle~ii~qE~e~L~~~V~kI~~~~----------pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeR 205 (1247)
+...+++.++++|++|+++.+++|+.++ |+||+++++|++.|+++|.++||++++++++.+|+|
T Consensus 248 ~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~ler 327 (546)
T 3p9d_F 248 NSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMER 327 (546)
T ss_dssp CBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHH
T ss_pred CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHH
T ss_conf 74499768999999999999999999999999999874201588649984676768999999988984681379888999
Q ss_pred HHHHHCCEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 99996992726777899998324437999995163222334578886159999857998548999647999899999999
Q 000863 206 IARCTGALITPSIDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHV 285 (1247)
Q Consensus 206 IAr~TGA~Iissid~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~ 285 (1247)
||++|||.++++++++++..||+|+.|+++++++ ++++||+||+++.+|||+|||+++.+|+|+||+
T Consensus 328 ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~-------------~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~ 394 (546)
T 3p9d_F 328 LQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGE-------------EKFTYVTENTDPKSCTILIKGSTHYALAQTKDA 394 (546)
T ss_dssp HHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSS-------------CCCEECSSCSCCSCEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHCCEEECCHHHCCHHHCCCCCEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 9998598794562008986788562799998469-------------469999568997558999779877899999999
Q ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 9999999999561491760798445444
Q 000863 286 VQYAVFAAYHLSLETSFLADEGATLPKM 313 (1247)
Q Consensus 286 l~dai~v~~~l~lE~~~l~ggGa~e~~~ 313 (1247)
++||+++++++..|+++|+||||+|.+.
T Consensus 395 l~DAl~~~r~av~~~~iVpGGGa~e~~~ 422 (546)
T 3p9d_F 395 VRDGLRAVANVLKDKNIIPGAGAFYIAL 422 (546)
T ss_dssp HHHHHHHHHHHTTSCCEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEECCCHHHHHH
T ss_conf 9999999999833995995887999999
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=1.00 E-value=1 Score=421.02 Aligned_cols=296 Identities=22% Similarity=0.296 Sum_probs=270.5
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC------------------CCCCCCHHHHHHHHHH
Q ss_conf 8520543503577877430899969999999999999999984876------------------7667890027989999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGIK------------------LGKEDSEEDWLGIITT 64 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~~~i~------------------~~~k~~~~~W~~~l~~ 64 (1247)
+++++|||+|++++..++++|+||..|+.|+.+|+...+..+..++ +++|.. ..|.+.|++
T Consensus 105 TtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~-~~~~~~i~~ 183 (553)
T 3ko1_A 105 KTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAV-AGAREYIAD 183 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSC-CTTHHHHHH
T ss_pred EEEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 3699962778876999974689961775121689999999999846887778499999999877568765-018999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC---
Q ss_conf 99999862288888999889668537998238997863259658993125789993011497199960002334586---
Q 000863 65 IAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP--- 141 (1247)
Q Consensus 65 l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~--- 141 (1247)
|+++|+..|.++......+|+ ++|+|++++||+..||++++|++|+|++.|+.||++++||||||++++|||++.+
T Consensus 184 livdAv~~V~~~~~G~~~~dl-~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le~~k~e~~~ 262 (553)
T 3ko1_A 184 IVVKAVTQVAELRGDKWYVDL-DNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPELDA 262 (553)
T ss_dssp HHHHHHHHHCCCTTSSCCCCG-GGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBSCCCCTTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEC-HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 999999999996287169841-2678898738751113145777730001379986320024588863753346766672
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCC
Q ss_conf ----7888999999999999999999999539997985478788999999985953570379488999999969927267
Q 000863 142 ----NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPS 217 (1247)
Q Consensus 142 ----~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iiss 217 (1247)
+...++++++++|++|++.++++|+..|+|||+++++|++.|+++|.++||+++++|++.+|+|||++|||.++++
T Consensus 263 ~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~ 342 (553)
T 3ko1_A 263 EIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSN 342 (553)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESC
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECC
T ss_conf 68708989999999989999999999998625648996157489999988754415322451524899877517834224
Q ss_pred CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77899998324437999995163222334578886159999857998548999647999899999999999999999956
Q 000863 218 IDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLS 297 (1247)
Q Consensus 218 id~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l~ 297 (1247)
++++++..||+|+.|++++++. ++++||+||+++.+|||+|||+++.+|+|+||+++||+++++++.
T Consensus 343 l~~l~~~~LG~a~~v~~~~ig~-------------d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av 409 (553)
T 3ko1_A 343 IDEISEQDLGYASLIEERKVGE-------------DKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVI 409 (553)
T ss_dssp GGGCCSSSSEECSEEECCCCSS-------------SCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCHHHHHHHHHCCC-------------CEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1008933333677777752386-------------507986068997548985504588888889999999999899886
Q ss_pred HCCEEEECCCCCCCCC
Q ss_conf 1491760798445444
Q 000863 298 LETSFLADEGATLPKM 313 (1247)
Q Consensus 298 lE~~~l~ggGa~e~~~ 313 (1247)
.|+++|+||||+|...
T Consensus 410 ~~g~iVpGGGa~e~~~ 425 (553)
T 3ko1_A 410 KDGRAIAGGGAVEIEI 425 (553)
T ss_dssp HHCEEEETTTHHHHHH
T ss_pred HCCCEECCCCEEEEHH
T ss_conf 2574401786367479
No 9
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=1.00 E-value=1 Score=420.23 Aligned_cols=296 Identities=22% Similarity=0.323 Sum_probs=271.8
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC----------------CCCCCCHHHHHHHHHHHH
Q ss_conf 8520543503577877430899969999999999999999984876----------------766789002798999999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGIK----------------LGKEDSEEDWLGIITTIA 66 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~~~i~----------------~~~k~~~~~W~~~l~~l~ 66 (1247)
+++++|||+|++++..++++++||..|+.|+.+|+...+..+..++ +++|.. ..|.+.|++|+
T Consensus 97 TtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~~~~~~~l~~va~tsl~sKi~-~~~~~~i~~li 175 (545)
T 1a6d_A 97 TTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEKSTDDATLRKIALTALSGKNT-GLSNDFLADLV 175 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHTTTSSC-CSTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC-CCCHHHHHHHH
T ss_conf 48999999999999999987998899999999999999999998627899999999999998735403-45477999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC-----
Q ss_conf 999862288888999889668537998238997863259658993125789993011497199960002334586-----
Q 000863 67 WQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP----- 141 (1247)
Q Consensus 67 ~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~----- 141 (1247)
++|+..|.++......+|+ ++|+|+|++||+..||++++|++|+|++.|+.||++++||||||++++|||++.+
T Consensus 176 vdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v 254 (545)
T 1a6d_A 176 VKAVNAVAEVRDGKTIVDT-ANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKV 254 (545)
T ss_dssp HHHHHHHCEESSSSEECCG-GGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCSSCCEE
T ss_pred HHHHHHHHCCCCCCCCCCC-CEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCEE
T ss_conf 9999997233678753434-317999955897200278840798225788998564058879999167775534678439
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCCCC
Q ss_conf --788899999999999999999999953999798547878899999998595357037948899999996992726777
Q 000863 142 --NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPSID 219 (1247)
Q Consensus 142 --~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iissid 219 (1247)
+...+++.++++|++|++.++++|++.|++||+++++|++.|+++|.++||++|+++++.+|+|||++|||.++++++
T Consensus 255 ~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~ 334 (545)
T 1a6d_A 255 QISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLD 334 (545)
T ss_dssp EECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGG
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCEEECCCC
T ss_conf 96789999999999999999999999972998999878866899999998792675248999999999985992546603
Q ss_pred CCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999832443799999516322233457888615999985799854899964799989999999999999999995614
Q 000863 220 NISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLSLE 299 (1247)
Q Consensus 220 ~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l~lE 299 (1247)
++++..||+|+.|++++++. ++|+||+||+++..|||+|||+++.+|+|+||+++||+++++++..|
T Consensus 335 ~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 335 DLTPSVLGEAETVEERKIGD-------------DRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp GCCGGGCEEEEEEEEEEETT-------------EEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 29987778862899999558-------------34999966888745899976898899999999999999999999868
Q ss_pred CEEEECCCCCCCCC
Q ss_conf 91760798445444
Q 000863 300 TSFLADEGATLPKM 313 (1247)
Q Consensus 300 ~~~l~ggGa~e~~~ 313 (1247)
+++|+||||+|...
T Consensus 402 g~iVpGGGa~e~~~ 415 (545)
T 1a6d_A 402 GKFLWGGGAVEAEL 415 (545)
T ss_dssp CEEEETTTHHHHHH
T ss_pred CCEEECCCHHHHHH
T ss_conf 98886857999999
No 10
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=1.00 E-value=1 Score=420.09 Aligned_cols=293 Identities=22% Similarity=0.311 Sum_probs=269.1
Q ss_pred CCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC------------------CCCCCCHHHHHHHHHH
Q ss_conf 8520543503577877430899969999999999999999984876------------------7667890027989999
Q 000863 3 SSSSSLSSMFPAREKQNEGNKEPLRAVVQGHFRALVSELLRAEGIK------------------LGKEDSEEDWLGIITT 64 (1247)
Q Consensus 3 ~s~~~lagell~~a~~~~~~~~~~~~i~~gh~~al~~qLl~~~~i~------------------~~~k~~~~~W~~~l~~ 64 (1247)
+++++|||+|++++..++++++||..|+.|+.+|+...+..+..++ +++|. ...|.+.|++
T Consensus 94 TtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~-~~~~~~~i~~ 172 (543)
T 3ruv_A 94 TTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKG-AEKAKEKLAE 172 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTC-GGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC-CCHHHHHHHH
T ss_conf 217999999999999998679988999999999999999999996287888887999999999852555-4215779999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEECCCCCCCCC---
Q ss_conf 99999862288888999889668537998238997863259658993125789993011497199960002334586---
Q 000863 65 IAWQAANFVKPDTSRGGSMDPGDYVKVKCIAKGSPNESTFIKGVVCTKNIKHKRMTSQYRNPRLLILGGALEYQRVP--- 141 (1247)
Q Consensus 65 l~~~Av~~v~~d~~~~~~mDi~~yVkIkkI~GG~~~DS~lI~GvV~~Knvahk~M~~~i~nprIlLL~~~Ley~r~~--- 141 (1247)
|+++|+..|.++ ++.+|+ ++|+|++++||+..||++++|++|+|++.|+.||++++|||||+++++|||++.+
T Consensus 173 livdAv~~V~~~---~g~~dl-~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e~~~ 248 (543)
T 3ruv_A 173 IIVEAVSAVVDD---EGKVDK-DLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDA 248 (543)
T ss_dssp HHHHHHHHHCCT---TSCCCG-GGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCSSCC
T ss_pred HHHHHHHHHHCC---CCCCCC-CEEEEEECCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 999999986223---787655-4389998479970010463556883266674445120574799982654223345675
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEECCC
Q ss_conf ----7888999999999999999999999539997985478788999999985953570379488999999969927267
Q 000863 142 ----NQLASFNTLLQQENDHLKMVISKIEALRPNVLLVEKSVSSYAQDLLLAKEISLVLNVKRPLLERIARCTGALITPS 217 (1247)
Q Consensus 142 ----~~~~sle~ii~qE~e~L~~~V~kI~~~~pnVVLvek~Vs~~Al~~L~~~gI~vv~~VK~~~LeRIAr~TGA~Iiss 217 (1247)
+...++++++++|++|++.++++|++.|+|||+++++|++.|+++|.++||+++++|++.+|+|||++|||.++++
T Consensus 249 ~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~ 328 (543)
T 3ruv_A 249 EIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAA 328 (543)
T ss_dssp CEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEESC
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCEECC
T ss_conf 06857899999999999999999999999709979999188648999999986967996378878999999859941344
Q ss_pred CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77899998324437999995163222334578886159999857998548999647999899999999999999999956
Q 000863 218 IDNISTTRLGHCELFKLEKVSEEHETSNQFNKKPSKTLMYFEGCPRRLGCMVLLRGKCREELKKVKHVVQYAVFAAYHLS 297 (1247)
Q Consensus 218 id~L~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~KtliffeGc~~~~gcTIlLRG~s~~~L~evKr~l~dai~v~~~l~ 297 (1247)
+++++...||+|+.|+++++++ ++++||+||+++.+|||+|||+++.+|+|+||+++||+++++++.
T Consensus 329 l~~l~~~~LG~a~~v~~~~ig~-------------~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (543)
T 3ruv_A 329 IAALSAQDLGDAGLVEERKISG-------------DSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTI 395 (543)
T ss_dssp GGGCCGGGCEEEEEEEEEEETT-------------EEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1329987888561799999679-------------159999778887416899658979999999999999999999998
Q ss_pred HCCEEEECCCCCCCCC
Q ss_conf 1491760798445444
Q 000863 298 LETSFLADEGATLPKM 313 (1247)
Q Consensus 298 lE~~~l~ggGa~e~~~ 313 (1247)
.|+++|+||||+|.+.
T Consensus 396 ~~g~iVpGGGa~e~~~ 411 (543)
T 3ruv_A 396 EDGRIVSGGGSTEVEL 411 (543)
T ss_dssp HHCEEEETTTHHHHHH
T ss_pred HCCCEECCCCHHHHHH
T ss_conf 6688505886999999
Done!