Query 000867
Match_columns 1247
No_of_seqs 559 out of 4566
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:38:13 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000867.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000867hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 4E-193 9E-198 1751.4 87.0 1182 1-1247 143-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-186 6E-191 1823.9 128.7 1243 1-1247 193-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 9E-164 2E-168 1620.9 120.9 1181 1-1246 89-1393(1394)
4 KOG0061 Transporter, ABC super 100.0 3.1E-93 6.8E-98 872.7 57.7 557 674-1247 22-612 (613)
5 PLN03211 ABC transporter G-25; 100.0 1.1E-90 2.4E-95 859.8 60.7 559 675-1244 37-659 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1.3E-90 2.8E-95 862.5 58.6 543 702-1247 37-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 7.4E-88 1.6E-92 895.4 61.0 568 673-1244 25-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 5.9E-87 1.3E-91 881.0 58.3 570 674-1244 128-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 1.6E-82 3.5E-87 778.9 38.8 541 702-1245 127-732 (1391)
10 KOG0054 Multidrug resistance-a 100.0 1.4E-73 3E-78 721.3 38.1 731 1-891 549-1336(1381)
11 KOG0061 Transporter, ABC super 100.0 3.8E-71 8.3E-76 677.9 50.1 548 1-596 58-608 (613)
12 TIGR00955 3a01204 The Eye Pigm 100.0 1.3E-70 2.8E-75 683.3 54.0 551 1-595 53-612 (617)
13 PLN03211 ABC transporter G-25; 100.0 2.2E-69 4.7E-74 669.9 54.4 548 1-596 96-658 (659)
14 KOG0055 Multidrug/pheromone ex 100.0 6.8E-70 1.5E-74 670.4 38.2 197 671-891 981-1187(1228)
15 TIGR01257 rim_protein retinal- 100.0 3.6E-64 7.8E-69 662.6 65.5 201 677-899 1937-2139(2272)
16 PLN03130 ABC transporter C fam 100.0 6.8E-65 1.5E-69 682.1 41.2 197 675-899 1235-1441(1622)
17 PLN03232 ABC transporter C fam 100.0 8.5E-64 1.8E-68 672.8 39.1 196 676-899 1233-1438(1495)
18 TIGR00957 MRP_assoc_pro multi 100.0 2.5E-62 5.5E-67 659.4 40.7 197 675-899 1282-1488(1522)
19 PTZ00265 multidrug resistance 100.0 2.1E-60 4.5E-65 632.9 45.2 201 676-899 1164-1427(1466)
20 TIGR01271 CFTR_protein cystic 100.0 3.2E-60 6.9E-65 636.9 45.9 196 675-899 1215-1420(1490)
21 PTZ00243 ABC transporter; Prov 100.0 3.6E-60 7.8E-65 636.1 42.6 196 676-899 1307-1513(1560)
22 COG1123 ATPase components of v 100.0 3.7E-58 8E-63 532.2 41.7 444 1-899 37-499 (539)
23 PRK10762 D-ribose transporter 100.0 4.2E-58 9.1E-63 561.3 40.8 187 705-899 267-464 (501)
24 PRK13549 xylose transporter AT 100.0 3.9E-58 8.5E-63 562.3 40.6 190 703-899 275-474 (506)
25 PRK09700 D-allose transporter 100.0 4.4E-58 9.6E-63 562.9 39.2 187 705-899 278-478 (510)
26 PRK10261 glutathione transport 100.0 2.2E-57 4.8E-62 565.3 42.9 211 677-899 313-533 (623)
27 TIGR03269 met_CoM_red_A2 methy 100.0 2.3E-57 5E-62 557.9 42.1 202 678-899 280-497 (520)
28 TIGR02633 xylG D-xylose ABC tr 100.0 2.6E-57 5.7E-62 555.2 40.6 190 703-899 273-472 (500)
29 PRK15439 autoinducer 2 ABC tra 100.0 1.8E-57 4E-62 555.7 38.9 187 705-899 278-472 (510)
30 PRK15134 microcin C ABC transp 100.0 4.5E-57 9.7E-62 555.9 40.5 187 703-899 299-495 (529)
31 PRK11288 araG L-arabinose tran 100.0 8.1E-57 1.8E-61 550.0 38.3 187 705-899 268-465 (501)
32 PRK10982 galactose/methyl gala 100.0 4.3E-56 9.3E-61 542.8 37.0 188 704-899 262-460 (491)
33 PRK10938 putative molybdenum t 100.0 3.5E-55 7.6E-60 535.1 35.4 194 677-890 260-463 (490)
34 PRK15064 ABC transporter ATP-b 100.0 6.5E-53 1.4E-57 519.2 39.1 183 677-899 319-504 (530)
35 PRK11819 putative ABC transpor 100.0 1.3E-51 2.7E-56 509.0 47.5 186 677-899 324-511 (556)
36 COG4172 ABC-type uncharacteriz 100.0 5.6E-52 1.2E-56 448.8 36.4 430 2-890 39-488 (534)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.3E-51 7.2E-56 505.4 47.1 186 677-899 322-509 (552)
38 PRK13409 putative ATPase RIL; 100.0 1.6E-51 3.5E-56 504.4 35.8 183 677-899 340-523 (590)
39 PRK11147 ABC transporter ATPas 100.0 1.2E-48 2.5E-53 488.9 44.9 186 677-899 319-506 (635)
40 PRK10636 putative ABC transpor 100.0 9.1E-49 2E-53 488.1 43.7 182 677-899 312-496 (638)
41 COG0488 Uup ATPase components 100.0 3.3E-48 7.2E-53 460.9 38.1 197 2-228 32-233 (530)
42 COG1129 MglA ABC-type sugar tr 100.0 2.6E-47 5.6E-52 439.4 35.9 188 705-900 274-471 (500)
43 PLN03073 ABC transporter F fam 100.0 2.5E-46 5.4E-51 466.0 39.2 185 677-899 508-693 (718)
44 COG3845 ABC-type uncharacteriz 100.0 2E-43 4.4E-48 396.8 35.4 205 676-899 256-472 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.6E-41 3.4E-46 342.7 19.1 192 678-891 3-198 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 3.2E-41 6.8E-46 340.5 15.5 191 1-234 30-224 (240)
47 COG1116 TauB ABC-type nitrate/ 100.0 2.5E-39 5.3E-44 338.6 20.9 197 677-899 3-200 (248)
48 COG1136 SalX ABC-type antimicr 100.0 3.6E-39 7.9E-44 338.4 22.2 185 703-899 18-211 (226)
49 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8E-39 1.7E-43 340.4 22.3 200 677-899 4-208 (254)
50 COG1125 OpuBA ABC-type proline 100.0 2.8E-39 6.1E-44 332.1 16.7 194 1-235 29-225 (309)
51 COG1131 CcmA ABC-type multidru 100.0 1E-38 2.3E-43 359.2 21.7 200 677-899 4-206 (293)
52 COG2884 FtsE Predicted ATPase 100.0 6.8E-39 1.5E-43 315.7 16.8 190 678-889 2-197 (223)
53 COG1135 AbcC ABC-type metal io 100.0 4.7E-39 1E-43 341.5 16.5 191 1-234 34-230 (339)
54 COG1135 AbcC ABC-type metal io 100.0 1.4E-38 3E-43 337.9 19.2 195 678-890 2-203 (339)
55 KOG0927 Predicted transporter 100.0 6.4E-38 1.4E-42 352.7 25.0 179 675-890 387-567 (614)
56 COG1118 CysA ABC-type sulfate/ 100.0 1.4E-38 3.1E-43 336.6 15.5 193 1-234 30-226 (345)
57 COG1116 TauB ABC-type nitrate/ 100.0 3.7E-38 7.9E-43 329.8 15.6 177 1-222 31-207 (248)
58 COG3839 MalK ABC-type sugar tr 100.0 4.1E-38 9E-43 350.1 16.6 203 1-254 31-234 (338)
59 COG1125 OpuBA ABC-type proline 100.0 8.4E-38 1.8E-42 321.2 17.3 198 678-899 2-205 (309)
60 COG1127 Ttg2A ABC-type transpo 100.0 1.4E-37 3.1E-42 319.1 18.3 201 676-899 7-215 (263)
61 COG1117 PstB ABC-type phosphat 100.0 1.5E-37 3.2E-42 311.9 18.0 195 676-890 6-209 (253)
62 COG3840 ThiQ ABC-type thiamine 100.0 4.5E-38 9.7E-43 306.7 13.5 191 1-234 27-218 (231)
63 TIGR01257 rim_protein retinal- 100.0 1.5E-32 3.3E-37 364.0 70.6 202 675-899 926-1129(2272)
64 COG1120 FepC ABC-type cobalami 100.0 1.2E-37 2.5E-42 333.6 17.8 202 677-899 2-208 (258)
65 COG3839 MalK ABC-type sugar tr 100.0 2.3E-37 5E-42 344.1 20.4 199 677-899 3-203 (338)
66 COG3638 ABC-type phosphate/pho 100.0 2.8E-37 6E-42 316.1 16.9 204 677-900 3-218 (258)
67 COG1127 Ttg2A ABC-type transpo 100.0 2.3E-37 5.1E-42 317.5 16.1 194 1-235 36-235 (263)
68 COG3842 PotA ABC-type spermidi 100.0 1.1E-37 2.3E-42 348.8 14.7 206 1-256 33-239 (352)
69 COG1118 CysA ABC-type sulfate/ 100.0 4E-37 8.8E-42 325.6 16.8 189 702-899 14-207 (345)
70 COG1120 FepC ABC-type cobalami 100.0 2E-37 4.3E-42 331.9 14.1 195 1-234 30-227 (258)
71 COG4555 NatA ABC-type Na+ tran 100.0 3.1E-37 6.6E-42 306.3 14.0 185 704-899 16-202 (245)
72 COG1131 CcmA ABC-type multidru 100.0 9.3E-37 2E-41 343.4 18.7 195 1-238 33-229 (293)
73 COG1117 PstB ABC-type phosphat 100.0 5.2E-37 1.1E-41 307.9 14.5 207 1-254 35-248 (253)
74 COG3842 PotA ABC-type spermidi 100.0 2.1E-36 4.6E-41 338.3 19.0 201 676-899 4-206 (352)
75 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2E-36 4.3E-41 322.1 17.5 193 1-234 32-226 (254)
76 COG4555 NatA ABC-type Na+ tran 100.0 8.5E-37 1.8E-41 303.2 13.3 191 1-235 30-222 (245)
77 PRK13537 nodulation ABC transp 100.0 1.5E-35 3.2E-40 337.4 23.9 200 676-899 6-207 (306)
78 COG1136 SalX ABC-type antimicr 100.0 3.6E-36 7.8E-41 315.8 17.3 181 1-224 33-220 (226)
79 TIGR00960 3a0501s02 Type II (G 100.0 2.1E-35 4.6E-40 321.5 22.5 200 678-899 2-207 (216)
80 COG3638 ABC-type phosphate/pho 100.0 7E-36 1.5E-40 305.9 16.7 200 1-235 32-237 (258)
81 TIGR02314 ABC_MetN D-methionin 100.0 6.6E-35 1.4E-39 334.0 24.5 202 678-899 2-210 (343)
82 PRK11650 ugpC glycerol-3-phosp 100.0 4.7E-35 1E-39 338.3 23.3 200 677-899 3-204 (356)
83 cd03261 ABC_Org_Solvent_Resist 100.0 5.2E-35 1.1E-39 322.6 22.4 198 679-899 2-206 (235)
84 TIGR03265 PhnT2 putative 2-ami 100.0 7.8E-35 1.7E-39 336.1 23.3 199 677-899 4-204 (353)
85 PRK11432 fbpC ferric transport 100.0 1.2E-34 2.6E-39 333.8 24.4 199 677-899 6-206 (351)
86 COG1137 YhbG ABC-type (unclass 100.0 3.5E-36 7.6E-41 298.4 9.8 191 701-900 15-209 (243)
87 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.3E-35 2E-39 317.0 21.9 200 679-899 2-209 (218)
88 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-34 2.3E-39 315.2 21.7 197 679-899 2-200 (213)
89 PRK13536 nodulation factor exp 100.0 2.1E-34 4.6E-39 330.7 25.3 200 676-899 40-241 (340)
90 TIGR03258 PhnT 2-aminoethylpho 100.0 1.3E-34 2.9E-39 334.3 23.4 199 677-899 5-208 (362)
91 cd03269 ABC_putative_ATPase Th 100.0 1.6E-34 3.4E-39 313.1 21.9 196 679-899 2-197 (210)
92 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.3E-34 4.9E-39 314.2 23.0 199 679-899 2-201 (220)
93 TIGR02673 FtsE cell division A 100.0 2E-34 4.4E-39 313.4 22.5 199 678-899 2-206 (214)
94 cd03234 ABCG_White The White s 100.0 2.9E-34 6.2E-39 314.6 23.6 208 678-899 4-213 (226)
95 COG3840 ThiQ ABC-type thiamine 100.0 6.7E-35 1.5E-39 284.6 15.5 181 708-899 17-199 (231)
96 TIGR01188 drrA daunorubicin re 100.0 1.2E-34 2.7E-39 330.5 20.4 187 702-899 5-193 (302)
97 cd03265 ABC_DrrA DrrA is the A 100.0 2.7E-34 5.8E-39 313.6 22.1 197 679-899 2-201 (220)
98 cd03292 ABC_FtsE_transporter F 100.0 3.6E-34 7.7E-39 311.6 22.9 198 679-899 2-205 (214)
99 PRK09452 potA putrescine/sperm 100.0 3.3E-34 7.1E-39 332.2 24.0 199 677-899 14-214 (375)
100 COG2274 SunT ABC-type bacterio 100.0 4.2E-33 9.1E-38 342.5 35.0 202 671-899 465-676 (709)
101 cd03301 ABC_MalK_N The N-termi 100.0 3.2E-34 7E-39 311.6 22.3 197 679-899 2-200 (213)
102 PRK10851 sulfate/thiosulfate t 100.0 3.8E-34 8.2E-39 330.4 23.8 201 678-899 3-206 (353)
103 cd03266 ABC_NatA_sodium_export 100.0 2.8E-34 6.1E-39 313.3 21.5 202 678-899 2-205 (218)
104 TIGR01288 nodI ATP-binding ABC 100.0 3.9E-34 8.5E-39 326.5 23.4 199 677-899 4-204 (303)
105 PRK11607 potG putrescine trans 100.0 6.5E-34 1.4E-38 330.5 25.2 200 676-899 18-219 (377)
106 cd03219 ABC_Mj1267_LivG_branch 100.0 4.4E-34 9.5E-39 315.8 22.3 200 679-899 2-212 (236)
107 cd03218 ABC_YhbG The ABC trans 100.0 4.3E-34 9.3E-39 314.9 22.1 197 679-899 2-202 (232)
108 PRK11000 maltose/maltodextrin 100.0 5.4E-34 1.2E-38 331.9 23.9 199 677-899 3-203 (369)
109 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-34 5.1E-39 309.4 19.0 200 677-899 3-208 (235)
110 PRK11650 ugpC glycerol-3-phosp 100.0 1.4E-34 3.1E-39 334.3 18.6 191 1-234 32-223 (356)
111 PRK11629 lolD lipoprotein tran 100.0 8E-34 1.7E-38 312.5 23.7 196 677-891 5-208 (233)
112 PRK11153 metN DL-methionine tr 100.0 5.5E-34 1.2E-38 329.4 23.2 202 678-899 2-210 (343)
113 TIGR01186 proV glycine betaine 100.0 4.1E-34 9E-39 328.9 21.8 187 702-899 5-199 (363)
114 COG1124 DppF ABC-type dipeptid 100.0 1.7E-34 3.8E-39 298.6 16.3 190 2-235 36-231 (252)
115 cd03296 ABC_CysA_sulfate_impor 100.0 1.2E-33 2.5E-38 312.6 24.1 201 678-899 3-206 (239)
116 COG4525 TauB ABC-type taurine 100.0 3.1E-34 6.7E-39 282.7 17.2 180 703-894 18-198 (259)
117 cd03226 ABC_cobalt_CbiO_domain 100.0 3.5E-34 7.5E-39 309.1 19.4 182 703-899 13-195 (205)
118 COG1124 DppF ABC-type dipeptid 100.0 5.9E-34 1.3E-38 294.6 19.8 201 677-899 3-211 (252)
119 COG4181 Predicted ABC-type tra 100.0 1.9E-34 4.2E-39 278.1 15.1 181 701-891 21-209 (228)
120 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-34 5E-39 309.4 17.3 191 2-235 33-228 (235)
121 cd03268 ABC_BcrA_bacitracin_re 100.0 5.8E-34 1.3E-38 308.2 20.4 193 679-899 2-195 (208)
122 PRK11432 fbpC ferric transport 100.0 2.7E-34 5.9E-39 330.9 18.7 191 1-234 34-225 (351)
123 TIGR01186 proV glycine betaine 100.0 3.1E-34 6.6E-39 330.0 19.0 191 1-234 21-218 (363)
124 TIGR03258 PhnT 2-aminoethylpho 100.0 2.7E-34 5.9E-39 331.8 18.7 192 1-234 33-227 (362)
125 KOG0058 Peptide exporter, ABC 100.0 9.8E-35 2.1E-39 341.0 15.1 193 1-235 496-691 (716)
126 KOG0058 Peptide exporter, ABC 100.0 9.1E-35 2E-39 341.3 14.8 195 674-890 462-664 (716)
127 cd03260 ABC_PstB_phosphate_tra 100.0 6.4E-34 1.4E-38 312.3 20.7 198 679-899 2-209 (227)
128 TIGR01166 cbiO cobalt transpor 100.0 7.5E-34 1.6E-38 302.6 20.6 178 703-890 5-188 (190)
129 COG2884 FtsE Predicted ATPase 100.0 3.2E-34 6.9E-39 282.7 16.1 185 1-229 30-220 (223)
130 TIGR02211 LolD_lipo_ex lipopro 100.0 1.1E-33 2.4E-38 309.3 22.2 201 678-899 2-210 (221)
131 cd03225 ABC_cobalt_CbiO_domain 100.0 6.2E-34 1.3E-38 308.9 20.0 186 703-899 14-203 (211)
132 cd03262 ABC_HisP_GlnQ_permease 100.0 8.7E-34 1.9E-38 308.3 21.1 198 679-899 2-204 (213)
133 PRK11248 tauB taurine transpor 100.0 1.5E-33 3.2E-38 313.5 23.2 196 678-899 2-198 (255)
134 TIGR02314 ABC_MetN D-methionin 100.0 3.7E-34 8.1E-39 327.8 18.9 191 1-234 33-229 (343)
135 TIGR03265 PhnT2 putative 2-ami 100.0 3.7E-34 8.1E-39 330.4 19.0 191 1-234 32-223 (353)
136 TIGR03522 GldA_ABC_ATP gliding 100.0 1.3E-33 2.8E-38 321.7 22.9 197 678-899 3-201 (301)
137 cd03258 ABC_MetN_methionine_tr 100.0 9.4E-34 2E-38 312.3 21.1 202 678-899 2-210 (233)
138 TIGR03608 L_ocin_972_ABC putat 100.0 1.1E-33 2.4E-38 305.8 21.0 185 703-899 11-202 (206)
139 COG4148 ModC ABC-type molybdat 100.0 1.1E-34 2.3E-39 301.5 12.3 185 1-234 26-217 (352)
140 PRK09536 btuD corrinoid ABC tr 100.0 1E-33 2.3E-38 329.5 22.1 202 677-899 3-208 (402)
141 cd03263 ABC_subfamily_A The AB 100.0 1.2E-33 2.6E-38 308.7 21.2 198 679-899 2-201 (220)
142 PRK10908 cell division protein 100.0 1.9E-33 4.2E-38 307.3 22.8 199 678-899 2-206 (222)
143 PRK13537 nodulation ABC transp 100.0 5.1E-34 1.1E-38 324.7 18.6 191 1-235 35-227 (306)
144 cd03235 ABC_Metallic_Cations A 100.0 7.2E-34 1.6E-38 308.7 18.6 187 703-899 12-201 (213)
145 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-33 2.4E-38 317.4 20.6 188 701-899 35-230 (269)
146 PRK13538 cytochrome c biogenes 100.0 1.8E-33 3.9E-38 302.9 21.4 187 678-890 2-190 (204)
147 cd03256 ABC_PhnC_transporter A 100.0 1.2E-33 2.6E-38 313.5 20.4 201 679-899 2-214 (241)
148 COG4175 ProV ABC-type proline/ 100.0 2.5E-34 5.5E-39 304.0 14.1 192 1-235 56-254 (386)
149 PRK09452 potA putrescine/sperm 100.0 6.1E-34 1.3E-38 330.0 18.5 191 1-234 42-233 (375)
150 COG1137 YhbG ABC-type (unclass 100.0 1.1E-34 2.5E-39 287.7 10.1 193 1-235 32-228 (243)
151 cd03224 ABC_TM1139_LivF_branch 100.0 1.6E-33 3.5E-38 308.3 20.4 195 679-899 2-201 (222)
152 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.3E-33 5E-38 310.8 21.7 198 679-899 2-205 (242)
153 PRK11264 putative amino-acid A 100.0 2.9E-33 6.2E-38 311.9 22.5 199 678-899 4-213 (250)
154 PRK09493 glnQ glutamine ABC tr 100.0 3.3E-33 7.2E-38 309.3 22.6 199 678-899 2-205 (240)
155 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-33 3.3E-38 312.9 19.8 202 678-899 2-215 (243)
156 PRK13637 cbiO cobalt transport 100.0 3.4E-33 7.4E-38 315.9 22.9 203 678-899 3-214 (287)
157 PRK11247 ssuB aliphatic sulfon 100.0 3.2E-33 7E-38 310.0 21.8 192 676-899 11-203 (257)
158 TIGR01189 ccmA heme ABC export 100.0 3.8E-33 8.2E-38 299.1 21.4 185 679-890 2-188 (198)
159 PRK11831 putative ABC transpor 100.0 4.6E-33 9.9E-38 312.6 22.9 200 677-899 7-213 (269)
160 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-33 7.9E-38 306.9 21.7 204 678-899 2-215 (228)
161 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.4E-33 1.2E-37 306.6 23.1 191 678-891 2-195 (236)
162 cd03264 ABC_drug_resistance_li 100.0 3.1E-33 6.7E-38 303.3 20.7 195 679-899 2-198 (211)
163 COG0411 LivG ABC-type branched 100.0 5.2E-34 1.1E-38 295.5 13.5 204 1-235 32-239 (250)
164 TIGR01188 drrA daunorubicin re 100.0 1.2E-33 2.6E-38 322.3 17.8 191 1-235 21-213 (302)
165 cd03231 ABC_CcmA_heme_exporter 100.0 4.1E-33 8.9E-38 299.3 20.7 184 679-891 2-187 (201)
166 PRK13647 cbiO cobalt transport 100.0 5.5E-33 1.2E-37 312.4 22.3 200 677-899 4-207 (274)
167 PRK13634 cbiO cobalt transport 100.0 5.3E-33 1.2E-37 314.8 22.2 202 678-899 3-215 (290)
168 PRK10895 lipopolysaccharide AB 100.0 4.7E-33 1E-37 308.3 21.2 199 678-899 4-206 (241)
169 PRK10851 sulfate/thiosulfate t 100.0 1.8E-33 3.9E-38 324.7 18.6 195 1-234 30-225 (353)
170 PRK13539 cytochrome c biogenes 100.0 4.3E-33 9.3E-38 300.6 20.4 186 678-890 3-188 (207)
171 COG4525 TauB ABC-type taurine 100.0 2.9E-33 6.2E-38 275.8 17.1 191 1-236 33-225 (259)
172 PRK10584 putative ABC transpor 100.0 8.9E-33 1.9E-37 303.5 23.1 202 677-899 6-215 (228)
173 COG2274 SunT ABC-type bacterio 100.0 7.7E-34 1.7E-38 349.0 16.2 192 2-235 502-696 (709)
174 TIGR00972 3a0107s01c2 phosphat 100.0 8.3E-33 1.8E-37 307.3 22.9 199 678-899 2-212 (247)
175 PRK13631 cbiO cobalt transport 100.0 8.8E-33 1.9E-37 315.5 23.6 204 676-899 20-245 (320)
176 PRK13540 cytochrome c biogenes 100.0 8.1E-33 1.7E-37 296.9 21.8 185 678-890 2-188 (200)
177 PRK10619 histidine/lysine/argi 100.0 9.2E-33 2E-37 308.6 23.1 199 677-899 5-221 (257)
178 cd03261 ABC_Org_Solvent_Resist 100.0 2.5E-33 5.4E-38 309.2 18.3 191 1-233 28-224 (235)
179 PRK11607 potG putrescine trans 100.0 2.6E-33 5.6E-38 325.5 19.2 191 1-234 47-238 (377)
180 KOG0057 Mitochondrial Fe/S clu 100.0 2.2E-33 4.8E-38 317.9 17.8 196 675-899 349-554 (591)
181 PRK13643 cbiO cobalt transport 100.0 1.2E-32 2.5E-37 311.7 23.7 202 678-899 2-213 (288)
182 cd03233 ABC_PDR_domain1 The pl 100.0 9.2E-33 2E-37 296.4 21.7 183 677-899 3-189 (202)
183 PRK13651 cobalt transporter AT 100.0 9E-33 2E-37 313.6 22.5 203 678-899 3-234 (305)
184 PRK13650 cbiO cobalt transport 100.0 6.5E-33 1.4E-37 312.6 21.2 201 677-899 4-209 (279)
185 PRK13646 cbiO cobalt transport 100.0 8.4E-33 1.8E-37 312.9 22.1 203 677-899 2-215 (286)
186 PRK13536 nodulation factor exp 100.0 3.4E-33 7.5E-38 320.8 18.9 191 1-235 69-261 (340)
187 TIGR01978 sufC FeS assembly AT 100.0 9.5E-33 2.1E-37 306.6 21.9 203 679-899 2-214 (243)
188 PRK13635 cbiO cobalt transport 100.0 8.2E-33 1.8E-37 311.5 21.5 200 677-899 5-209 (279)
189 COG0410 LivF ABC-type branched 100.0 2.3E-33 4.9E-38 288.4 15.3 191 1-235 31-226 (237)
190 PRK11124 artP arginine transpo 100.0 1.1E-32 2.4E-37 305.4 22.0 198 678-899 3-210 (242)
191 PRK13644 cbiO cobalt transport 100.0 9.3E-33 2E-37 310.5 21.5 198 678-899 2-204 (274)
192 PRK10070 glycine betaine trans 100.0 1.1E-32 2.4E-37 320.7 22.9 187 702-899 40-234 (400)
193 PRK13543 cytochrome c biogenes 100.0 1.5E-32 3.2E-37 298.0 22.3 188 677-890 11-198 (214)
194 PRK13636 cbiO cobalt transport 100.0 1.2E-32 2.6E-37 311.1 22.4 201 676-899 4-211 (283)
195 PRK14247 phosphate ABC transpo 100.0 1.7E-32 3.7E-37 305.5 23.3 202 677-899 3-214 (250)
196 COG4988 CydD ABC-type transpor 100.0 4.1E-33 9E-38 321.9 18.8 190 675-890 318-516 (559)
197 PRK11614 livF leucine/isoleuci 100.0 9.9E-33 2.2E-37 304.8 21.0 197 677-899 5-206 (237)
198 PRK11000 maltose/maltodextrin 100.0 4.2E-33 9.2E-38 324.5 18.9 191 1-234 31-222 (369)
199 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.2E-32 2.5E-37 298.8 20.7 181 708-899 16-198 (211)
200 PRK14273 phosphate ABC transpo 100.0 2E-32 4.4E-37 305.5 23.2 200 677-899 7-218 (254)
201 PRK14267 phosphate ABC transpo 100.0 1.8E-32 4E-37 305.9 22.8 202 677-899 4-217 (253)
202 TIGR02868 CydC thiol reductant 100.0 3.5E-33 7.6E-38 345.3 18.7 189 675-889 332-529 (529)
203 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-32 3.6E-37 305.9 22.3 199 678-899 1-216 (252)
204 PRK13632 cbiO cobalt transport 100.0 1.5E-32 3.3E-37 308.8 22.2 201 676-899 6-211 (271)
205 PRK13641 cbiO cobalt transport 100.0 1.6E-32 3.5E-37 310.7 22.5 204 677-899 2-214 (287)
206 TIGR03411 urea_trans_UrtD urea 100.0 1.8E-32 4E-37 303.9 22.4 200 678-899 3-211 (242)
207 PRK13548 hmuV hemin importer A 100.0 1.6E-32 3.4E-37 306.3 22.0 198 678-899 3-210 (258)
208 COG4988 CydD ABC-type transpor 100.0 2.5E-33 5.4E-38 323.7 16.0 192 1-235 349-543 (559)
209 COG0411 LivG ABC-type branched 100.0 6.7E-33 1.4E-37 287.2 17.4 191 701-899 15-219 (250)
210 PRK14268 phosphate ABC transpo 100.0 2.4E-32 5.2E-37 305.3 23.2 200 676-899 11-222 (258)
211 PRK11300 livG leucine/isoleuci 100.0 2E-32 4.3E-37 306.2 22.5 202 677-899 5-223 (255)
212 cd03232 ABC_PDR_domain2 The pl 100.0 2E-32 4.4E-37 291.4 21.4 176 677-899 3-178 (192)
213 TIGR03740 galliderm_ABC gallid 100.0 2E-32 4.4E-37 299.5 21.9 192 679-899 2-193 (223)
214 PRK11231 fecE iron-dicitrate t 100.0 1.5E-32 3.2E-37 306.6 20.9 201 678-899 3-207 (255)
215 PRK10575 iron-hydroxamate tran 100.0 1.9E-32 4.2E-37 307.1 21.7 203 676-899 10-217 (265)
216 cd03213 ABCG_EPDR ABCG transpo 100.0 2.8E-32 6.2E-37 290.6 21.8 177 677-899 3-181 (194)
217 PRK15079 oligopeptide ABC tran 100.0 2.6E-32 5.6E-37 312.7 23.0 215 676-899 7-231 (331)
218 COG4152 ABC-type uncharacteriz 100.0 8.5E-33 1.8E-37 282.5 16.8 187 701-899 13-199 (300)
219 TIGR02982 heterocyst_DevA ABC 100.0 2.9E-32 6.3E-37 297.4 22.3 202 678-899 2-210 (220)
220 PRK13652 cbiO cobalt transport 100.0 2.8E-32 6.1E-37 307.3 22.9 199 678-899 4-207 (277)
221 PRK11153 metN DL-methionine tr 100.0 7.6E-33 1.7E-37 319.9 18.6 191 1-234 33-229 (343)
222 PRK14241 phosphate transporter 100.0 3.6E-32 7.7E-37 304.1 23.4 201 677-899 4-216 (258)
223 PRK13649 cbiO cobalt transport 100.0 2.7E-32 5.8E-37 308.8 22.6 202 678-899 3-214 (280)
224 cd03265 ABC_DrrA DrrA is the A 100.0 7.7E-33 1.7E-37 302.1 17.5 189 1-232 28-218 (220)
225 cd03267 ABC_NatA_like Similar 100.0 2.2E-32 4.8E-37 301.2 21.2 188 701-899 32-223 (236)
226 COG0410 LivF ABC-type branched 100.0 1.6E-32 3.4E-37 282.2 18.3 197 678-899 4-206 (237)
227 PRK14242 phosphate transporter 100.0 4.5E-32 9.7E-37 302.7 23.6 206 675-899 4-217 (253)
228 PRK10744 pstB phosphate transp 100.0 3.7E-32 7.9E-37 304.2 22.8 204 673-899 9-224 (260)
229 cd03259 ABC_Carb_Solutes_like 100.0 9.1E-33 2E-37 300.1 17.4 185 1-228 28-213 (213)
230 PRK13638 cbiO cobalt transport 100.0 2.8E-32 6.1E-37 306.8 21.9 198 678-899 2-205 (271)
231 TIGR02769 nickel_nikE nickel i 100.0 3.6E-32 7.8E-37 304.9 22.7 208 678-899 3-220 (265)
232 TIGR01277 thiQ thiamine ABC tr 100.0 3E-32 6.6E-37 295.7 21.4 195 679-899 2-198 (213)
233 TIGR01184 ntrCD nitrate transp 100.0 2E-32 4.3E-37 300.3 20.0 183 706-899 1-184 (230)
234 cd03300 ABC_PotA_N PotA is an 100.0 4.8E-32 1E-36 298.0 23.1 197 679-899 2-200 (232)
235 KOG0062 ATPase component of AB 100.0 5.8E-32 1.3E-36 303.2 23.7 182 674-890 359-540 (582)
236 PRK09984 phosphonate/organopho 100.0 2.8E-32 6.2E-37 305.6 21.4 204 677-899 4-222 (262)
237 PRK10253 iron-enterobactin tra 100.0 2.4E-32 5.3E-37 306.3 20.8 203 676-899 6-213 (265)
238 COG4559 ABC-type hemin transpo 100.0 1.4E-32 3E-37 275.4 16.5 191 678-891 2-203 (259)
239 PRK14245 phosphate ABC transpo 100.0 6.1E-32 1.3E-36 300.9 23.6 204 677-899 3-214 (250)
240 TIGR01288 nodI ATP-binding ABC 100.0 1.3E-32 2.8E-37 314.0 18.6 191 1-235 32-224 (303)
241 TIGR03410 urea_trans_UrtE urea 100.0 2.6E-32 5.6E-37 300.3 20.3 194 679-899 2-201 (230)
242 KOG0057 Mitochondrial Fe/S clu 100.0 5E-33 1.1E-37 315.1 14.5 191 2-235 381-574 (591)
243 PRK10070 glycine betaine trans 100.0 1.4E-32 2.9E-37 320.0 18.6 191 1-234 56-253 (400)
244 TIGR03873 F420-0_ABC_ATP propo 100.0 3.3E-32 7.2E-37 304.0 21.1 201 678-899 2-206 (256)
245 PRK14237 phosphate transporter 100.0 8.1E-32 1.8E-36 302.2 24.3 209 672-899 15-231 (267)
246 PRK13648 cbiO cobalt transport 100.0 5.3E-32 1.1E-36 304.3 22.7 200 677-899 7-211 (269)
247 PRK14235 phosphate transporter 100.0 7.2E-32 1.6E-36 302.6 23.6 202 676-899 18-231 (267)
248 PRK13637 cbiO cobalt transport 100.0 1.5E-32 3.4E-37 310.6 18.4 191 1-234 35-233 (287)
249 TIGR03415 ABC_choXWV_ATP choli 100.0 3.1E-32 6.6E-37 314.6 21.0 188 701-899 35-234 (382)
250 PRK13639 cbiO cobalt transport 100.0 6.6E-32 1.4E-36 304.0 23.2 199 678-899 2-206 (275)
251 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2E-32 4.3E-37 307.2 18.8 191 1-234 52-249 (269)
252 COG4559 ABC-type hemin transpo 100.0 1E-32 2.2E-37 276.3 14.3 192 1-234 29-229 (259)
253 TIGR00968 3a0106s01 sulfate AB 100.0 7.3E-32 1.6E-36 297.4 22.7 197 679-899 2-200 (237)
254 cd03296 ABC_CysA_sulfate_impor 100.0 2E-32 4.3E-37 302.7 18.1 195 1-234 30-225 (239)
255 PRK13645 cbiO cobalt transport 100.0 5.3E-32 1.1E-36 307.3 22.1 205 676-899 5-220 (289)
256 PRK13549 xylose transporter AT 100.0 4.9E-32 1.1E-36 332.1 23.2 204 677-899 5-212 (506)
257 cd03219 ABC_Mj1267_LivG_branch 100.0 2E-32 4.4E-37 302.5 17.9 200 1-234 28-231 (236)
258 PRK13547 hmuV hemin importer A 100.0 4.6E-32 1E-36 303.4 20.9 203 678-899 2-224 (272)
259 PRK11022 dppD dipeptide transp 100.0 1E-31 2.2E-36 307.9 24.0 209 677-899 3-223 (326)
260 TIGR00960 3a0501s02 Type II (G 100.0 1.4E-32 3E-37 299.3 16.0 180 1-224 31-216 (216)
261 PRK11144 modC molybdate transp 100.0 2E-32 4.3E-37 317.5 18.2 185 1-234 26-217 (352)
262 PRK14259 phosphate ABC transpo 100.0 7.9E-32 1.7E-36 302.4 22.3 199 676-899 12-222 (269)
263 COG1245 Predicted ATPase, RNas 100.0 1.5E-31 3.2E-36 294.6 23.7 159 707-890 358-517 (591)
264 cd03258 ABC_MetN_methionine_tr 100.0 2.5E-32 5.3E-37 301.0 17.8 191 1-234 33-229 (233)
265 PRK14269 phosphate ABC transpo 100.0 8.3E-32 1.8E-36 298.9 22.1 204 678-899 3-210 (246)
266 PRK14256 phosphate ABC transpo 100.0 1.3E-31 2.8E-36 298.7 23.7 206 676-899 3-216 (252)
267 PRK13633 cobalt transporter AT 100.0 6.1E-32 1.3E-36 305.1 21.3 204 677-899 4-213 (280)
268 PRK14250 phosphate ABC transpo 100.0 6E-32 1.3E-36 298.9 20.8 194 677-899 3-201 (241)
269 cd03299 ABC_ModC_like Archeal 100.0 1.1E-31 2.4E-36 295.6 22.7 184 705-899 14-199 (235)
270 cd03218 ABC_YhbG The ABC trans 100.0 3E-32 6.4E-37 300.3 18.2 189 1-233 28-220 (232)
271 TIGR02324 CP_lyasePhnL phospho 100.0 1.2E-31 2.7E-36 293.6 22.9 205 678-899 2-218 (224)
272 PRK13640 cbiO cobalt transport 100.0 5.8E-32 1.3E-36 305.4 20.9 202 677-899 5-212 (282)
273 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.1E-32 6.8E-37 297.3 18.1 185 1-230 32-218 (220)
274 PRK10247 putative ABC transpor 100.0 6.9E-32 1.5E-36 295.1 20.8 195 677-899 7-206 (225)
275 TIGR03522 GldA_ABC_ATP gliding 100.0 2.4E-32 5.2E-37 311.2 17.8 190 1-235 30-221 (301)
276 PRK10771 thiQ thiamine transpo 100.0 7.2E-32 1.6E-36 296.8 20.9 196 678-899 2-199 (232)
277 PRK11174 cysteine/glutathione 100.0 2.3E-32 5.1E-37 342.3 19.2 195 676-899 348-552 (588)
278 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-32 4.6E-37 300.3 16.4 189 1-232 28-226 (227)
279 PRK14257 phosphate ABC transpo 100.0 1.6E-31 3.4E-36 306.0 24.3 207 676-899 79-293 (329)
280 PRK13541 cytochrome c biogenes 100.0 1.2E-31 2.6E-36 286.6 21.8 183 678-890 2-184 (195)
281 cd03269 ABC_putative_ATPase Th 100.0 2.7E-32 5.9E-37 295.7 17.0 183 1-228 28-210 (210)
282 cd03230 ABC_DR_subfamily_A Thi 100.0 6.7E-32 1.4E-36 282.6 19.3 161 679-899 2-164 (173)
283 cd03301 ABC_MalK_N The N-termi 100.0 3.5E-32 7.6E-37 295.6 17.8 185 1-228 28-213 (213)
284 KOG0055 Multidrug/pheromone ex 100.0 3.2E-32 6.9E-37 337.5 19.5 194 674-891 347-550 (1228)
285 PRK13643 cbiO cobalt transport 100.0 2.6E-32 5.7E-37 308.9 17.2 207 1-252 34-253 (288)
286 PRK09473 oppD oligopeptide tra 100.0 1.4E-31 3E-36 307.0 23.4 209 677-899 12-231 (330)
287 PRK14240 phosphate transporter 100.0 1.8E-31 3.9E-36 297.3 23.5 200 677-899 3-214 (250)
288 cd03264 ABC_drug_resistance_li 100.0 3.3E-32 7.1E-37 295.3 17.0 183 1-228 27-211 (211)
289 TIGR03415 ABC_choXWV_ATP choli 100.0 4.1E-32 8.8E-37 313.6 18.7 191 1-234 52-253 (382)
290 PRK13634 cbiO cobalt transport 100.0 3.4E-32 7.4E-37 308.2 17.7 191 1-234 35-234 (290)
291 PRK14244 phosphate ABC transpo 100.0 1.5E-31 3.2E-36 298.0 22.6 203 679-899 7-217 (251)
292 TIGR01187 potA spermidine/putr 100.0 3.5E-32 7.6E-37 312.4 17.9 188 4-234 1-189 (325)
293 PRK14270 phosphate ABC transpo 100.0 1.6E-31 3.5E-36 297.7 22.7 200 677-899 4-215 (251)
294 PRK15112 antimicrobial peptide 100.0 1.2E-31 2.6E-36 300.8 21.8 209 677-899 4-219 (267)
295 PRK11144 modC molybdate transp 100.0 1.1E-31 2.3E-36 311.4 22.0 175 708-899 16-198 (352)
296 PRK13642 cbiO cobalt transport 100.0 1.1E-31 2.4E-36 302.5 21.4 201 677-899 4-209 (277)
297 TIGR02770 nickel_nikD nickel i 100.0 7.8E-32 1.7E-36 296.0 19.6 186 705-899 1-195 (230)
298 PRK14239 phosphate transporter 100.0 1.7E-31 3.8E-36 298.0 22.7 200 677-899 5-216 (252)
299 TIGR02142 modC_ABC molybdenum 100.0 4.5E-32 9.8E-37 315.2 18.6 189 1-234 25-220 (354)
300 TIGR02142 modC_ABC molybdenum 100.0 1.1E-31 2.5E-36 311.8 21.9 179 708-899 15-201 (354)
301 cd03263 ABC_subfamily_A The AB 100.0 3.4E-32 7.5E-37 297.2 16.5 188 1-233 30-219 (220)
302 PRK11308 dppF dipeptide transp 100.0 2.3E-31 5.1E-36 304.7 24.1 210 677-899 5-224 (327)
303 PRK11174 cysteine/glutathione 100.0 2.9E-32 6.4E-37 341.4 18.2 192 1-235 378-572 (588)
304 PRK14274 phosphate ABC transpo 100.0 1.9E-31 4.1E-36 298.5 22.6 204 677-899 12-223 (259)
305 cd03256 ABC_PhnC_transporter A 100.0 5.4E-32 1.2E-36 300.2 18.1 198 1-233 29-232 (241)
306 cd03266 ABC_NatA_sodium_export 100.0 3.6E-32 7.7E-37 296.7 16.2 184 1-228 33-218 (218)
307 PRK15056 manganese/iron transp 100.0 1.4E-31 3.1E-36 301.0 21.5 203 677-899 6-211 (272)
308 PRK00635 excinuclease ABC subu 100.0 1.2E-30 2.7E-35 340.6 33.3 118 774-899 759-880 (1809)
309 PRK14262 phosphate ABC transpo 100.0 2.5E-31 5.5E-36 296.1 23.3 204 677-899 3-214 (250)
310 PRK13631 cbiO cobalt transport 100.0 5.1E-32 1.1E-36 309.2 18.0 189 1-234 54-264 (320)
311 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.6E-32 1.2E-36 299.7 17.8 191 1-234 29-224 (242)
312 PRK14260 phosphate ABC transpo 100.0 2.3E-31 5.1E-36 297.5 22.9 200 677-899 7-218 (259)
313 PRK15093 antimicrobial peptide 100.0 2.5E-31 5.4E-36 306.0 23.7 208 677-899 3-228 (330)
314 cd03268 ABC_BcrA_bacitracin_re 100.0 4.9E-32 1.1E-36 293.2 16.9 180 1-228 28-208 (208)
315 PRK10762 D-ribose transporter 100.0 1.3E-31 2.9E-36 327.8 22.8 202 677-899 4-210 (501)
316 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.1E-32 8.8E-37 296.2 16.2 180 1-224 32-218 (218)
317 cd03224 ABC_TM1139_LivF_branch 100.0 5.2E-32 1.1E-36 296.4 17.1 187 1-233 28-219 (222)
318 cd03297 ABC_ModC_molybdenum_tr 100.0 1.5E-31 3.3E-36 290.6 20.5 178 708-899 16-201 (214)
319 cd03226 ABC_cobalt_CbiO_domain 100.0 3.9E-32 8.5E-37 293.1 15.7 177 1-225 28-205 (205)
320 PRK15079 oligopeptide ABC tran 100.0 6.8E-32 1.5E-36 309.3 18.5 194 1-234 49-250 (331)
321 PRK13651 cobalt transporter AT 100.0 4.7E-32 1E-36 307.8 17.0 190 1-234 35-253 (305)
322 PRK09536 btuD corrinoid ABC tr 100.0 5.2E-32 1.1E-36 315.3 17.6 194 1-234 31-227 (402)
323 PRK13647 cbiO cobalt transport 100.0 9.5E-32 2.1E-36 302.3 18.8 189 1-233 33-225 (274)
324 PRK14236 phosphate transporter 100.0 4.3E-31 9.3E-36 297.2 24.2 206 675-899 23-236 (272)
325 PRK00349 uvrA excinuclease ABC 100.0 1.4E-30 3E-35 328.6 31.2 102 123-232 472-582 (943)
326 PRK14272 phosphate ABC transpo 100.0 4.3E-31 9.3E-36 294.8 23.4 201 677-899 4-216 (252)
327 PRK14253 phosphate ABC transpo 100.0 3.3E-31 7.1E-36 295.0 22.1 204 677-899 3-213 (249)
328 PRK14249 phosphate ABC transpo 100.0 4.8E-31 1E-35 293.9 23.4 204 677-899 4-215 (251)
329 PRK14271 phosphate ABC transpo 100.0 4E-31 8.8E-36 297.3 23.0 204 677-899 21-231 (276)
330 PRK11831 putative ABC transpor 100.0 1E-31 2.3E-36 301.6 18.2 192 1-234 35-232 (269)
331 cd03245 ABCC_bacteriocin_expor 100.0 1.2E-31 2.6E-36 293.0 18.0 197 677-899 2-207 (220)
332 TIGR02315 ABC_phnC phosphonate 100.0 7.1E-32 1.5E-36 299.5 16.5 198 1-233 30-233 (243)
333 cd03229 ABC_Class3 This class 100.0 1.4E-31 3.1E-36 281.5 17.8 163 679-899 2-170 (178)
334 PRK11629 lolD lipoprotein tran 100.0 1.4E-31 3E-36 294.8 18.5 186 1-230 37-229 (233)
335 PRK10418 nikD nickel transport 100.0 4.5E-31 9.8E-36 294.3 22.8 199 676-899 3-210 (254)
336 PRK14254 phosphate ABC transpo 100.0 4.7E-31 1E-35 297.9 23.2 199 676-899 38-248 (285)
337 PRK13650 cbiO cobalt transport 100.0 1.2E-31 2.6E-36 302.3 18.4 190 1-234 35-228 (279)
338 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 9.5E-32 2E-36 342.0 19.3 194 676-899 450-653 (686)
339 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.6E-31 3.5E-36 294.8 18.7 190 1-234 29-220 (236)
340 PRK09700 D-allose transporter 100.0 2.5E-31 5.5E-36 326.4 22.3 202 677-899 5-214 (510)
341 PRK14258 phosphate ABC transpo 100.0 7.1E-31 1.5E-35 293.7 24.0 205 677-899 7-220 (261)
342 COG4987 CydC ABC-type transpor 100.0 6.9E-32 1.5E-36 305.8 15.6 196 677-899 336-541 (573)
343 PRK14251 phosphate ABC transpo 100.0 5.5E-31 1.2E-35 293.6 22.7 200 677-899 4-215 (251)
344 PRK10790 putative multidrug tr 100.0 2.3E-31 5E-36 333.3 22.0 196 676-900 339-544 (592)
345 PRK11264 putative amino-acid A 100.0 1.3E-31 2.8E-36 298.7 17.5 191 1-234 31-232 (250)
346 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.6E-31 5.7E-36 296.4 20.0 195 677-899 2-205 (275)
347 TIGR02633 xylG D-xylose ABC tr 100.0 4.3E-31 9.2E-36 323.9 23.7 203 678-899 2-210 (500)
348 KOG0066 eIF2-interacting prote 100.0 3.1E-30 6.8E-35 280.3 27.5 178 674-890 583-762 (807)
349 TIGR02770 nickel_nikD nickel i 100.0 1.5E-31 3.2E-36 293.8 17.5 194 1-234 14-214 (230)
350 PRK11288 araG L-arabinose tran 100.0 3.6E-31 7.9E-36 324.0 22.8 202 677-899 4-209 (501)
351 PRK14248 phosphate ABC transpo 100.0 5.4E-31 1.2E-35 296.2 22.4 200 677-899 21-232 (268)
352 PRK14275 phosphate ABC transpo 100.0 5.9E-31 1.3E-35 297.5 22.8 200 677-899 39-250 (286)
353 PRK14261 phosphate ABC transpo 100.0 6.2E-31 1.3E-35 293.4 22.6 204 677-899 6-217 (253)
354 TIGR01184 ntrCD nitrate transp 100.0 1.4E-31 2.9E-36 293.7 17.0 189 1-232 13-201 (230)
355 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-31 2.8E-36 290.6 16.7 185 1-228 26-211 (211)
356 PRK11701 phnK phosphonate C-P 100.0 5.4E-31 1.2E-35 294.6 22.2 200 677-899 6-221 (258)
357 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-31 2.9E-36 296.5 17.0 190 1-234 29-224 (240)
358 PRK14263 phosphate ABC transpo 100.0 8E-31 1.7E-35 292.6 23.4 203 676-899 7-217 (261)
359 cd03297 ABC_ModC_molybdenum_tr 100.0 1.9E-31 4.2E-36 289.7 17.9 183 1-228 25-214 (214)
360 PRK13646 cbiO cobalt transport 100.0 1.1E-31 2.3E-36 303.8 16.5 190 1-234 35-234 (286)
361 CHL00131 ycf16 sulfate ABC tra 100.0 7E-31 1.5E-35 293.1 22.8 198 677-891 7-213 (252)
362 PRK09473 oppD oligopeptide tra 100.0 1.8E-31 3.9E-36 306.1 18.4 198 1-234 44-250 (330)
363 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 4.7E-31 1E-35 288.0 20.8 179 701-899 33-211 (224)
364 cd03252 ABCC_Hemolysin The ABC 100.0 1.1E-31 2.4E-36 296.7 15.7 194 679-899 2-205 (237)
365 COG1132 MdlB ABC-type multidru 100.0 8.6E-32 1.9E-36 335.2 16.6 197 675-899 326-532 (567)
366 PRK15439 autoinducer 2 ABC tra 100.0 5E-31 1.1E-35 322.9 23.0 195 677-899 11-209 (510)
367 PRK11176 lipid transporter ATP 100.0 3.3E-31 7.2E-36 331.8 21.9 199 676-900 340-548 (582)
368 PRK13635 cbiO cobalt transport 100.0 2.1E-31 4.6E-36 300.1 18.0 190 1-234 35-228 (279)
369 cd03215 ABC_Carb_Monos_II This 100.0 3.9E-31 8.5E-36 279.2 19.0 152 705-899 15-173 (182)
370 PRK14255 phosphate ABC transpo 100.0 1E-30 2.2E-35 291.7 23.1 200 677-899 5-216 (252)
371 TIGR02673 FtsE cell division A 100.0 1.8E-31 4E-36 290.2 16.8 179 1-223 30-214 (214)
372 cd03292 ABC_FtsE_transporter F 100.0 1.8E-31 3.8E-36 290.4 16.5 180 1-224 29-214 (214)
373 PRK13641 cbiO cobalt transport 100.0 2.1E-31 4.5E-36 301.7 17.4 190 1-234 35-233 (287)
374 PRK10419 nikE nickel transport 100.0 8.9E-31 1.9E-35 293.7 22.2 208 678-899 4-221 (268)
375 PRK11160 cysteine/glutathione 100.0 2.3E-31 5E-36 330.5 19.2 197 676-899 337-542 (574)
376 PRK10895 lipopolysaccharide AB 100.0 2.3E-31 5E-36 294.7 17.1 191 1-234 31-225 (241)
377 PRK13636 cbiO cobalt transport 100.0 2.7E-31 5.9E-36 300.1 17.9 191 1-234 34-230 (283)
378 PRK09580 sufC cysteine desulfu 100.0 1.1E-30 2.3E-35 291.0 22.5 197 678-891 2-207 (248)
379 TIGR02857 CydD thiol reductant 100.0 1.9E-31 4E-36 329.9 18.1 197 676-899 319-525 (529)
380 COG0444 DppD ABC-type dipeptid 100.0 1E-30 2.2E-35 283.5 21.4 209 678-899 2-223 (316)
381 cd03246 ABCC_Protease_Secretio 100.0 3.4E-31 7.3E-36 277.3 17.2 160 679-899 2-164 (173)
382 COG4604 CeuD ABC-type enteroch 100.0 4.7E-32 1E-36 268.0 10.0 193 1-234 29-224 (252)
383 PRK14246 phosphate ABC transpo 100.0 1.2E-30 2.7E-35 290.4 22.6 201 677-899 10-221 (257)
384 PRK14238 phosphate transporter 100.0 1.2E-30 2.7E-35 293.0 22.7 200 677-899 24-235 (271)
385 PRK10771 thiQ thiamine transpo 100.0 2.9E-31 6.3E-36 292.0 17.3 191 1-234 27-218 (232)
386 PRK11248 tauB taurine transpor 100.0 3.6E-31 7.7E-36 294.4 18.1 186 1-231 29-216 (255)
387 PRK14257 phosphate ABC transpo 100.0 3.2E-31 6.9E-36 303.5 18.2 196 1-234 110-312 (329)
388 PRK14265 phosphate ABC transpo 100.0 1.3E-30 2.9E-35 293.1 22.8 199 676-899 19-229 (274)
389 PRK11247 ssuB aliphatic sulfon 100.0 2.9E-31 6.2E-36 294.4 17.2 180 1-231 40-219 (257)
390 COG4175 ProV ABC-type proline/ 100.0 1.6E-31 3.5E-36 282.8 14.1 185 704-899 42-234 (386)
391 PRK14243 phosphate transporter 100.0 1.1E-30 2.4E-35 292.5 21.8 202 677-899 10-219 (264)
392 cd03234 ABCG_White The White s 100.0 4.9E-31 1.1E-35 289.0 18.5 187 1-228 35-226 (226)
393 cd03251 ABCC_MsbA MsbA is an e 100.0 2.1E-31 4.7E-36 293.9 15.7 194 679-899 2-205 (234)
394 TIGR02211 LolD_lipo_ex lipopro 100.0 3.1E-31 6.7E-36 289.9 16.7 181 1-225 33-220 (221)
395 cd03248 ABCC_TAP TAP, the Tran 100.0 2.3E-31 4.9E-36 291.9 15.7 200 676-899 10-217 (226)
396 COG4618 ArpD ABC-type protease 100.0 5.1E-31 1.1E-35 295.5 18.6 211 665-899 322-540 (580)
397 TIGR00972 3a0107s01c2 phosphat 100.0 3.8E-31 8.2E-36 294.0 17.4 192 1-234 29-231 (247)
398 TIGR03410 urea_trans_UrtE urea 100.0 3.4E-31 7.3E-36 291.4 16.9 187 1-233 28-219 (230)
399 cd03257 ABC_NikE_OppD_transpor 100.0 4.3E-31 9.3E-36 290.5 17.6 187 1-228 33-228 (228)
400 TIGR02323 CP_lyasePhnK phospho 100.0 1.5E-30 3.2E-35 290.6 22.1 200 677-899 3-218 (253)
401 PRK11022 dppD dipeptide transp 100.0 3.9E-31 8.5E-36 303.1 18.0 198 1-234 35-242 (326)
402 COG0444 DppD ABC-type dipeptid 100.0 4.3E-31 9.4E-36 286.4 17.2 199 1-234 33-242 (316)
403 COG4161 ArtP ABC-type arginine 100.0 3.8E-31 8.2E-36 252.2 14.6 188 2-232 31-227 (242)
404 COG1132 MdlB ABC-type multidru 100.0 2.2E-31 4.7E-36 331.6 16.9 193 1-235 357-552 (567)
405 cd03254 ABCC_Glucan_exporter_l 100.0 2.6E-31 5.7E-36 292.2 15.5 196 677-899 2-206 (229)
406 TIGR01277 thiQ thiamine ABC tr 100.0 5.1E-31 1.1E-35 286.1 17.5 186 1-229 26-212 (213)
407 PRK09544 znuC high-affinity zi 100.0 1E-30 2.3E-35 289.4 20.3 184 677-899 4-190 (251)
408 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.5E-31 5.5E-36 339.7 17.6 195 676-899 476-680 (710)
409 PRK11308 dppF dipeptide transp 100.0 5.5E-31 1.2E-35 301.7 18.4 192 1-234 43-243 (327)
410 PRK10908 cell division protein 100.0 4.6E-31 1E-35 288.5 17.0 181 1-225 30-216 (222)
411 cd03233 ABC_PDR_domain1 The pl 100.0 4.7E-31 1E-35 283.1 16.8 166 1-228 35-202 (202)
412 PRK10982 galactose/methyl gala 100.0 8.7E-31 1.9E-35 320.1 21.4 189 703-899 11-203 (491)
413 TIGR01193 bacteriocin_ABC ABC- 100.0 2.5E-31 5.4E-36 339.3 17.1 197 675-899 471-677 (708)
414 PRK13652 cbiO cobalt transport 100.0 5.6E-31 1.2E-35 296.8 18.0 191 1-234 32-226 (277)
415 PRK11614 livF leucine/isoleuci 100.0 4.2E-31 9E-36 291.9 16.6 188 1-234 33-225 (237)
416 PRK10619 histidine/lysine/argi 100.0 5.5E-31 1.2E-35 294.3 17.8 191 1-234 33-240 (257)
417 PRK03695 vitamin B12-transport 100.0 1.1E-30 2.3E-35 289.8 19.8 182 705-899 11-202 (248)
418 PRK14266 phosphate ABC transpo 100.0 1.9E-30 4.1E-35 289.1 22.0 204 677-899 3-214 (250)
419 TIGR03375 type_I_sec_LssB type 100.0 3.8E-31 8.3E-36 336.8 18.3 198 675-899 461-668 (694)
420 TIGR03411 urea_trans_UrtD urea 100.0 6.2E-31 1.3E-35 291.6 17.7 196 1-233 30-229 (242)
421 PRK13644 cbiO cobalt transport 100.0 5E-31 1.1E-35 296.4 17.1 189 1-234 30-223 (274)
422 PRK11300 livG leucine/isoleuci 100.0 6E-31 1.3E-35 294.2 17.6 206 1-234 33-242 (255)
423 PRK14264 phosphate ABC transpo 100.0 2.7E-30 5.9E-35 294.6 23.3 207 676-899 44-268 (305)
424 PRK14252 phosphate ABC transpo 100.0 3.6E-30 7.9E-35 288.9 23.9 202 675-899 14-229 (265)
425 COG4598 HisP ABC-type histidin 100.0 2.9E-31 6.3E-36 257.7 12.8 181 701-890 17-213 (256)
426 PRK13648 cbiO cobalt transport 100.0 1E-30 2.2E-35 293.9 19.3 190 1-234 37-230 (269)
427 PRK13649 cbiO cobalt transport 100.0 8.3E-31 1.8E-35 296.6 18.6 190 1-234 35-233 (280)
428 PRK13633 cobalt transporter AT 100.0 6.2E-31 1.3E-35 296.9 17.5 190 1-234 38-232 (280)
429 PRK13632 cbiO cobalt transport 100.0 5.7E-31 1.2E-35 296.0 17.1 190 1-234 37-230 (271)
430 PRK13638 cbiO cobalt transport 100.0 5.9E-31 1.3E-35 296.1 17.2 190 1-234 29-224 (271)
431 cd03225 ABC_cobalt_CbiO_domain 100.0 5E-31 1.1E-35 286.1 16.0 179 1-223 29-211 (211)
432 PRK13548 hmuV hemin importer A 100.0 7.2E-31 1.6E-35 293.0 17.6 191 1-234 30-229 (258)
433 TIGR03005 ectoine_ehuA ectoine 100.0 7E-31 1.5E-35 292.8 17.4 192 1-234 28-235 (252)
434 TIGR03740 galliderm_ABC gallid 100.0 9.5E-31 2.1E-35 286.3 18.1 182 1-231 28-209 (223)
435 TIGR02769 nickel_nikE nickel i 100.0 8.5E-31 1.9E-35 293.8 18.2 192 1-234 39-239 (265)
436 COG4181 Predicted ABC-type tra 100.0 7.4E-31 1.6E-35 253.4 15.0 181 2-226 39-226 (228)
437 cd03299 ABC_ModC_like Archeal 100.0 9.3E-31 2E-35 288.2 18.0 191 1-234 27-218 (235)
438 TIGR00958 3a01208 Conjugate Tr 100.0 4.1E-31 9E-36 335.5 17.4 196 676-899 477-682 (711)
439 PRK14247 phosphate ABC transpo 100.0 1.1E-30 2.3E-35 291.1 18.6 198 1-234 31-233 (250)
440 KOG0056 Heavy metal exporter H 100.0 2.1E-31 4.5E-36 293.6 12.5 198 672-891 532-735 (790)
441 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.8E-31 8.3E-36 336.4 16.8 189 2-235 482-673 (686)
442 PRK14268 phosphate ABC transpo 100.0 8.2E-31 1.8E-35 293.0 17.5 195 1-234 40-241 (258)
443 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.7E-31 1E-35 291.9 15.4 195 679-899 2-206 (238)
444 PRK14273 phosphate ABC transpo 100.0 7.8E-31 1.7E-35 292.8 17.3 196 1-234 35-237 (254)
445 PRK11176 lipid transporter ATP 100.0 3E-31 6.4E-36 332.2 15.5 193 2-235 372-567 (582)
446 COG4619 ABC-type uncharacteriz 100.0 1.7E-31 3.6E-36 257.1 9.9 186 701-899 14-203 (223)
447 PRK13639 cbiO cobalt transport 100.0 1.6E-30 3.4E-35 292.8 19.5 190 1-234 30-225 (275)
448 cd03267 ABC_NatA_like Similar 100.0 1.1E-30 2.5E-35 287.5 17.8 185 1-228 49-236 (236)
449 TIGR00630 uvra excinuclease AB 100.0 2.4E-29 5.3E-34 316.8 32.1 103 123-232 470-580 (924)
450 PRK14242 phosphate transporter 100.0 8.5E-31 1.8E-35 292.4 17.0 196 1-234 34-236 (253)
451 PRK10584 putative ABC transpor 100.0 1.1E-30 2.4E-35 286.9 17.6 182 1-226 38-226 (228)
452 cd03235 ABC_Metallic_Cations A 100.0 6E-31 1.3E-35 285.8 15.3 185 1-228 27-213 (213)
453 PRK11124 artP arginine transpo 100.0 7.9E-31 1.7E-35 290.7 16.5 189 1-233 30-228 (242)
454 PRK10790 putative multidrug tr 100.0 5E-31 1.1E-35 330.3 16.7 192 1-235 369-563 (592)
455 PRK13657 cyclic beta-1,2-gluca 100.0 8E-31 1.7E-35 327.9 18.2 197 676-900 333-539 (588)
456 PRK14267 phosphate ABC transpo 100.0 1.2E-30 2.7E-35 291.1 17.8 198 1-234 32-236 (253)
457 PRK14250 phosphate ABC transpo 100.0 9.4E-31 2E-35 289.3 16.6 186 1-234 31-220 (241)
458 TIGR03269 met_CoM_red_A2 methy 100.0 3.1E-30 6.8E-35 317.5 22.8 199 679-899 2-238 (520)
459 cd03217 ABC_FeS_Assembly ABC-t 100.0 2.1E-30 4.5E-35 277.9 18.5 168 679-899 2-174 (200)
460 cd03247 ABCC_cytochrome_bd The 100.0 1.1E-30 2.4E-35 274.8 16.2 162 679-899 2-165 (178)
461 PRK09984 phosphonate/organopho 100.0 9.7E-31 2.1E-35 293.2 16.6 201 1-233 32-240 (262)
462 TIGR01842 type_I_sec_PrtD type 100.0 1.4E-30 2.9E-35 322.5 19.6 198 676-899 315-522 (544)
463 PRK13640 cbiO cobalt transport 100.0 8.3E-31 1.8E-35 296.0 16.1 193 1-234 35-231 (282)
464 cd03262 ABC_HisP_GlnQ_permease 100.0 7.5E-31 1.6E-35 285.3 15.0 180 1-224 28-213 (213)
465 cd03253 ABCC_ATM1_transporter 100.0 8.5E-31 1.8E-35 289.5 15.6 193 679-899 2-204 (236)
466 TIGR01978 sufC FeS assembly AT 100.0 2.3E-30 4.9E-35 287.6 19.0 197 1-234 28-233 (243)
467 COG4161 ArtP ABC-type arginine 100.0 1.3E-30 2.8E-35 248.6 14.4 191 678-890 3-202 (242)
468 PRK13645 cbiO cobalt transport 100.0 9.5E-31 2.1E-35 297.1 16.3 191 1-234 39-239 (289)
469 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.7E-31 1E-35 337.2 15.4 190 2-235 508-700 (710)
470 COG4604 CeuD ABC-type enteroch 100.0 1.8E-31 4E-36 263.9 8.8 181 701-891 12-198 (252)
471 cd03223 ABCD_peroxisomal_ALDP 100.0 3.8E-30 8.3E-35 266.8 19.2 155 679-899 2-156 (166)
472 cd03300 ABC_PotA_N PotA is an 100.0 2.6E-30 5.7E-35 284.3 18.9 191 1-234 28-219 (232)
473 PRK14245 phosphate ABC transpo 100.0 1.5E-30 3.2E-35 289.8 17.0 195 1-234 31-233 (250)
474 PRK10253 iron-enterobactin tra 100.0 1.6E-30 3.4E-35 291.7 17.2 195 1-234 35-232 (265)
475 PRK14269 phosphate ABC transpo 100.0 1.8E-30 3.8E-35 288.3 17.4 197 1-234 30-229 (246)
476 COG0396 sufC Cysteine desulfur 100.0 6.4E-30 1.4E-34 261.2 19.9 198 677-890 3-205 (251)
477 PRK11160 cysteine/glutathione 100.0 8E-31 1.7E-35 325.7 16.3 186 1-235 368-562 (574)
478 TIGR02203 MsbA_lipidA lipid A 100.0 9.1E-31 2E-35 327.5 16.9 199 676-900 329-537 (571)
479 PRK15112 antimicrobial peptide 100.0 1.8E-30 4E-35 291.2 17.6 192 1-234 41-238 (267)
480 PRK13546 teichoic acids export 100.0 1.1E-29 2.3E-34 282.7 23.5 203 676-899 3-212 (264)
481 PRK15093 antimicrobial peptide 100.0 2E-30 4.3E-35 298.5 18.1 202 1-234 35-247 (330)
482 PRK14235 phosphate transporter 100.0 1.8E-30 3.8E-35 291.4 17.3 197 1-234 47-250 (267)
483 cd03244 ABCC_MRP_domain2 Domai 100.0 2.4E-30 5.1E-35 283.0 17.7 196 677-899 2-206 (221)
484 TIGR00968 3a0106s01 sulfate AB 100.0 2.4E-30 5.1E-35 285.4 17.7 191 1-234 28-219 (237)
485 cd03290 ABCC_SUR1_N The SUR do 100.0 4.1E-30 9E-35 280.2 19.4 181 703-899 14-210 (218)
486 cd03250 ABCC_MRP_domain1 Domai 100.0 2.9E-30 6.3E-35 278.3 17.8 181 679-891 2-190 (204)
487 COG4152 ABC-type uncharacteriz 100.0 1.3E-30 2.8E-35 266.6 13.9 192 1-237 30-221 (300)
488 COG4987 CydC ABC-type transpor 100.0 5.1E-31 1.1E-35 298.7 12.1 185 2-235 367-561 (573)
489 PRK10575 iron-hydroxamate tran 100.0 2.1E-30 4.5E-35 290.7 16.9 194 1-233 39-235 (265)
490 PRK14256 phosphate ABC transpo 100.0 2.9E-30 6.2E-35 287.8 17.9 197 1-234 32-235 (252)
491 TIGR00958 3a01208 Conjugate Tr 100.0 8.1E-31 1.8E-35 332.9 15.2 191 1-235 509-702 (711)
492 COG1129 MglA ABC-type sugar tr 100.0 6.8E-30 1.5E-34 295.4 21.4 203 676-899 7-214 (500)
493 PRK14270 phosphate ABC transpo 100.0 3E-30 6.5E-35 287.5 17.9 196 1-234 32-234 (251)
494 COG4598 HisP ABC-type histidin 100.0 7.2E-31 1.6E-35 255.0 11.0 190 2-234 35-240 (256)
495 TIGR03771 anch_rpt_ABC anchore 100.0 3.9E-30 8.4E-35 280.7 18.1 179 711-899 1-182 (223)
496 PRK15134 microcin C ABC transp 100.0 8E-30 1.7E-34 314.3 23.2 206 677-899 5-226 (529)
497 PRK14239 phosphate transporter 100.0 3E-30 6.5E-35 288.0 17.6 196 1-234 33-235 (252)
498 PRK14241 phosphate transporter 100.0 3E-30 6.6E-35 288.5 17.6 197 1-234 32-241 (258)
499 COG4618 ArpD ABC-type protease 100.0 1.8E-30 3.9E-35 291.1 15.6 195 2-237 365-562 (580)
500 PRK14274 phosphate ABC transpo 100.0 2.5E-30 5.4E-35 289.4 16.8 196 1-234 40-242 (259)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-193 Score=1751.37 Aligned_cols=1182 Identities=53% Similarity=0.905 Sum_probs=1075.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
|+.++||+||||||||++|+|.++.....+|+|++||++.++...++.++|++|+|.|++.+||||+|.|+++|++++.|
T Consensus 143 m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r 222 (1391)
T KOG0065|consen 143 MTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSR 222 (1391)
T ss_pred eEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccc
Confidence 58899999999999999999998876566889999999998887788999999999999999999999999999999888
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
++ +..|++++. ..+|.+++++||.+|+||.||++.+|++||||||||++|++++
T Consensus 223 ~~---~~~R~e~~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v 276 (1391)
T KOG0065|consen 223 YD---EVSRREKLA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLV 276 (1391)
T ss_pred cc---cccHHHHHH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeee
Confidence 76 333333321 2578899999999999999999999999999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHhC
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~~ 240 (1247)
++++++++||+|+|||+.|+.++++.++++++..+.+.++.++|++++++++||+|++|.+|+++|+||.+++++||+++
T Consensus 277 ~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~ 356 (1391)
T KOG0065|consen 277 GPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDM 356 (1391)
T ss_pred cCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhc
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCCCCCcccccccccc
Q 000867 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKMYGV 320 (1247)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1247)
||.||++++++||+++++++.++.++|.+...+....+..|+.+.|.+++.+.++..+++.+.+..+.++.....+.|..
T Consensus 357 Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v 436 (1391)
T KOG0065|consen 357 GFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSV 436 (1391)
T ss_pred CccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceec
Confidence 99999999999999999998888888888888887778899999999999999999999998888888888888899999
Q ss_pred cHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHHHhhHHHHHHH
Q 000867 321 GKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMSDISMT 400 (1247)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~~~~~~ 400 (1247)
+.+.|++.+..|.+.+++||..++.+...+..+++++.|++|++.++ ....+...+.|++||++++.++++++++..+
T Consensus 437 ~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~ 514 (1391)
T KOG0065|consen 437 PYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALT 514 (1391)
T ss_pred cHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999884 4445567789999999999999999999999
Q ss_pred hhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000867 401 IAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALFRFIAA 480 (1247)
Q Consensus 401 ~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~~~~~~~~i~~ 480 (1247)
+..+|+++|||+..+|++|++.++.+++++|++++.+++|.+|+||++|+.+++++||.+|+..++.+++++++|+++++
T Consensus 515 ~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~ 594 (1391)
T KOG0065|consen 515 FQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIAS 594 (1391)
T ss_pred HhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCccccccC------------C
Q 000867 481 AGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTS------------N 548 (1247)
Q Consensus 481 ~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~------------~ 548 (1247)
+++++.+|+.++++.++++.+++||+++..+||.||+|++|++|+.|++++++.|||+++.+.|.+. .
T Consensus 595 l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~ 674 (1391)
T KOG0065|consen 595 LSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKV 674 (1391)
T ss_pred hcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998822 1
Q ss_pred ---CCccchHHHhhhcCcc-----cCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeecCCcccccCCcCCC
Q 000867 549 ---SNETLGVQVLKSRGFF-----PHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGG 620 (1247)
Q Consensus 549 ---~~~~~g~~~l~~~~~~-----~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1247)
...+.|.+++...++. +...|+|+++++++|+.++|.+++.+++.+++.....+..........+.....
T Consensus 675 c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-- 752 (1391)
T KOG0065|consen 675 CAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-- 752 (1391)
T ss_pred chhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh--
Confidence 1345688888877776 777899999999999999999999999999998776666544322111100000
Q ss_pred CcccccCCCCCCCCCCCCcccccccchhhhhhhhccccccccCcCCCCCccCCCCcEEEEEeEEEEEecCchhhhccccc
Q 000867 621 TAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILE 700 (1247)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 700 (1247)
.. . ... .+.........+.++..|..+..++++||.|-+++|-+.+.++
T Consensus 753 ------~~-------~--~~~-------------~~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG--- 801 (1391)
T KOG0065|consen 753 ------AG-------S--SSE-------------IEKLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG--- 801 (1391)
T ss_pred ------cc-------c--ccc-------------ccccccccccccccccCCCccccccccceEEEEeCCccccccc---
Confidence 00 0 000 0000000011234455677778888999988888887665443
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCH
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
+++++|+|||+.++||-++||||+||||||||||+|+||...|.++|+|.|||.|.++..|+|.+|||.|+|.|.|.+||
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TV 881 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTV 881 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccch
Confidence 67889999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANP-SIIFMDEPTSG 859 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p-~il~lDEptsg 859 (1247)
||.|.|+|.||+|.+.+.+++.+.|+++++.|+|.+++|.+||.+| +|||.+||||++||++|+.|| .||||||||||
T Consensus 882 rESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSG 960 (1391)
T KOG0065|consen 882 RESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSG 960 (1391)
T ss_pred HHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999 899999999999999999999 89999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC---------------------------CCCcccCCCCCC
Q 000867 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG---------------------------IPGVENIKDGYN 912 (1247)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~---------------------------~~~~~~~~~~~n 912 (1247)
||+.++..|++++|+++++|+||+||+||||.++|+.||+. ..+..+|++..|
T Consensus 961 LDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~N 1040 (1391)
T KOG0065|consen 961 LDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKCISDEN 1040 (1391)
T ss_pred ccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccCCCCCC
Confidence 99999999999999999999999999999999999999981 012224666669
Q ss_pred CCcchhhhccchhhhhhhhhHHHHHhcCHHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCcHHHHHHHHHHHHhHHhhcC
Q 000867 913 PATWMLEVTAKSQELTLEIDFTDIYKGSELYRRNKALIEELSRPAPG-SKDLYFPTHYTQSFFMQCVACLWKQHWSYWRN 991 (1247)
Q Consensus 913 pad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~ 991 (1247)
||||++|+++...+...+.||++.|++|++++++++.+++++.++++ ..+...+++|++|+|.|++.++||+++.+||+
T Consensus 1041 PA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRs 1120 (1391)
T KOG0065|consen 1041 PAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRS 1120 (1391)
T ss_pred hHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence 99999999998877777889999999999999999999999998887 66677788899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHhhhcCCCCChH
Q 000867 992 PPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAM 1071 (1247)
Q Consensus 992 ~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~~~Y~~~ 1071 (1247)
|.|+++|++..++.||++|++||++++ +.++++|.+|++|+++++.+..+.....+.+..||.+++||+++|+||+.
T Consensus 1121 p~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~ 1197 (1391)
T KOG0065|consen 1121 PDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWT 1197 (1391)
T ss_pred cHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHH
Confidence 999999999999999999999999995 57999999999999999988877666767778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 000867 1072 PYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLW 1151 (1247)
Q Consensus 1072 ~y~~a~~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 1151 (1247)
+|.+|++++|+|+.++++++|.+++|+|+||..++.+|++|++.+++..++.+.+|+|+.+++||.++|+++.+++++++
T Consensus 1198 ~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~ 1277 (1391)
T KOG0065|consen 1198 PFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFW 1277 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCccccc----------CCCcHHHHHHhhcC----CCccch
Q 000867 1152 NVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME----------SGETVKQFVRSYFD----FKHDFL 1217 (1247)
Q Consensus 1152 ~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~~~~----------~~~~~~~~~~~~~~----~~~~~~ 1217 (1247)
.+|||+++|++.||.||+|+||+||+.|..++++..++++.+..|. +|.++++|+.+++| +.++..
T Consensus 1278 ~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~ 1357 (1391)
T KOG0065|consen 1278 NLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPL 1357 (1391)
T ss_pred HHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCc
Confidence 9999999999999999999999999999999999999999998884 34489999999999 777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000867 1218 GVVAVVVAAFAVLFGVLFAVGIKRFNFQNR 1247 (1247)
Q Consensus 1218 ~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1247 (1247)
....++..+|.+++..++.+.++|.++++|
T Consensus 1358 a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1358 ATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred ceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 777788888999999999999999999876
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.7e-186 Score=1823.92 Aligned_cols=1243 Identities=60% Similarity=1.061 Sum_probs=1058.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||||+|+|+++|+...+|+|.+||+++++...++.++||+|+|.+++++||+||+.|++++++.+.+
T Consensus 193 ~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~ 272 (1470)
T PLN03140 193 MTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTR 272 (1470)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999886567999999999886655567899999999999999999999999998876555
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
++...+..+++++....++.+++.+++++..++.+.+..++.+++.+||++++||.||++.+++|||||||||+||++|+
T Consensus 273 ~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~ 352 (1470)
T PLN03140 273 YDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIV 352 (1470)
T ss_pred ccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhc
Confidence 54444444555554455555555555555555555566789999999999999999999999999999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHhC
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~~ 240 (1247)
++|+++||||||+|||+.++.++++.|+++++..+.++|+++||+.++++++||+|++|++|+++|+|+.+++.+||+++
T Consensus 353 ~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~l 432 (1470)
T PLN03140 353 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESC 432 (1470)
T ss_pred CCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHc
Confidence 99999999999999999999999999999877656788888888899999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCCCCCcccccccccc
Q 000867 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKMYGV 320 (1247)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1247)
||+||++.|++||++++.+..++.++|.....|.+..+.+++.+.|+++..+++..++++.+.+....++.....+.|..
T Consensus 433 Gf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 512 (1470)
T PLN03140 433 GFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSV 512 (1470)
T ss_pred CCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcC
Confidence 99999999999999999988766566655555655678899999999988777766665544433333333334456888
Q ss_pred cHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHHHhhHHHHHHH
Q 000867 321 GKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMSDISMT 400 (1247)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~~~~~~ 400 (1247)
+.+.|++.+++|++..++||+..+..++.+.+++++++|++|++.+.+.....++..+.|++||++++.++++++.+..+
T Consensus 513 s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~ 592 (1470)
T PLN03140 513 PKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALM 592 (1470)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999876544444556778999999999899999999999
Q ss_pred hhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000867 401 IAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALFRFIAA 480 (1247)
Q Consensus 401 ~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~~~~~~~~i~~ 480 (1247)
+.++|+|+|||+.++|++++|++++++.++|+.++.+++|++++|||+||++++++||.++++.++..++++++++++++
T Consensus 593 ~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a 672 (1470)
T PLN03140 593 IQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIAS 672 (1470)
T ss_pred HhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCccccc-cCCCCccchHHHhh
Q 000867 481 AGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKF-TSNSNETLGVQVLK 559 (1247)
Q Consensus 481 ~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~-~~~~~~~~g~~~l~ 559 (1247)
+++++.+|+.+++++++++++|+||+++.++||.||+|++|+||+.|++++++.|||.+..+.+. +.....+.|.++|.
T Consensus 673 ~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~ 752 (1470)
T PLN03140 673 VCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLN 752 (1470)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988766432 22334567999999
Q ss_pred hcCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeecCCcccccCCcCCCCcccccCCCCCCCCCCCCc
Q 000867 560 SRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSNSSHKTCSES 639 (1247)
Q Consensus 560 ~~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (1247)
.+++...+.|+|.+++++++++++|.+++++++++.+.......+................-.. .... .... ....
T Consensus 753 ~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~-~~~~ 828 (1470)
T PLN03140 753 IFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS--LSSA-DGNN-TREV 828 (1470)
T ss_pred hcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc--cccc-cccc-cccc
Confidence 9999988889999999999999999999999999987554443332111000000000000000 0000 0000 0000
Q ss_pred ccccccchhh-hhhhhccccccccCcCCCCCccCCCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeE
Q 000867 640 EDITVKDSFS-QLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVL 718 (1247)
Q Consensus 640 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 718 (1247)
+......... ................+.++..|..|..++|+|++|+++.+.+.+..+...+++.+|+|||++++|||+
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel 908 (1470)
T PLN03140 829 AIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVL 908 (1470)
T ss_pred cccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeE
Confidence 0000000000 000000000000011233445677788999999999998776543333334556899999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCH
Q 000867 719 TALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDS 798 (1247)
Q Consensus 719 ~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~ 798 (1247)
+|||||||||||||||+|+|+.+++..+|+|.+||.+.....+++.+|||+|+|.+++.+||+|+|.|++.+|.+...+.
T Consensus 909 ~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~ 988 (1470)
T PLN03140 909 TALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSK 988 (1470)
T ss_pred EEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCH
Confidence 99999999999999999999987667889999999887655566789999999999999999999999998887766666
Q ss_pred HHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000867 799 ETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 878 (1247)
Q Consensus 799 ~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~ 878 (1247)
++++++++++++.+||.+++|+.+|.++.++|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++
T Consensus 989 ~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~ 1068 (1470)
T PLN03140 989 EEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1068 (1470)
T ss_pred HHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 66777899999999999999999998888899999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEeccCChHHHHhhhcC----------------------------CCCcccCCCCCCCCcchhhhccchhhhhhh
Q 000867 879 GRTVVCTIHQPSIDIFESFDEG----------------------------IPGVENIKDGYNPATWMLEVTAKSQELTLE 930 (1247)
Q Consensus 879 g~tvi~~~H~~~~~~~~~fd~~----------------------------~~~~~~~~~~~npad~~l~~~~~~~~~~~~ 930 (1247)
|+|||+++|||+.++++.||+. +.|.+.||+++|||||++|+++.+.+....
T Consensus 1069 g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~ 1148 (1470)
T PLN03140 1069 GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLG 1148 (1470)
T ss_pred CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhccccccccc
Confidence 9999999999999999999981 023345899999999999998866554445
Q ss_pred hhHHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhHHhhcChhHHHHHHHHHHHHHHHHH
Q 000867 931 IDFTDIYKGSELYRRNKALIEELSRPAPGSKDLYFPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFG 1010 (1247)
Q Consensus 931 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g 1010 (1247)
.||++.|++|+.++++++..++++.+.+...+...+..|+.++|+|++.|++|+++++||||.++++|+++++++|+++|
T Consensus 1149 ~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G 1228 (1470)
T PLN03140 1149 IDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVG 1228 (1470)
T ss_pred chHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHH
Confidence 68999999999999888777777665544444444567899999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHH
Q 000867 1011 TMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSS 1090 (1247)
Q Consensus 1011 ~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~~~Y~~~~y~~a~~l~~~p~~~~~~~ 1090 (1247)
++||+++++..+.+++++++|++|++++++++.++.+++|.+..||++|+|||++|+|++.+|++|++++|+|+.++.++
T Consensus 1229 ~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~ 1308 (1470)
T PLN03140 1229 TIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTT 1308 (1470)
T ss_pred HHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998776778999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred hHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCccCCCCccchhhh
Q 000867 1091 VYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRW 1170 (1247)
Q Consensus 1091 ~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w 1170 (1247)
+|++|+|||+||++++++||+|+++++++.++++++|+++++++|+.++|..+++++++++++||||++|+++||+||+|
T Consensus 1309 if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W 1388 (1470)
T PLN03140 1309 YYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVW 1388 (1470)
T ss_pred HHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchHHHHHHHHHHHhhCCCcccccC-----CCcHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000867 1171 YYWANPVAWTMYGLVASQFGDVEDKMES-----GETVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNFQ 1245 (1247)
Q Consensus 1171 ~~~~sp~~y~~~~l~~n~f~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1245 (1247)
+||+||++|+++|++.|||++.+..|++ ++++.+|+++.|||+++++|++++++++|+++|+++++++++++|||
T Consensus 1389 ~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q 1468 (1470)
T PLN03140 1389 YYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQ 1468 (1470)
T ss_pred HHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999998776542 24678999999999999999999999999999999999999999999
Q ss_pred cC
Q 000867 1246 NR 1247 (1247)
Q Consensus 1246 ~r 1247 (1247)
||
T Consensus 1469 ~r 1470 (1470)
T PLN03140 1469 TR 1470 (1470)
T ss_pred cC
Confidence 98
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=9.3e-164 Score=1620.85 Aligned_cols=1181 Identities=31% Similarity=0.526 Sum_probs=955.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC-CceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK-LKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~-~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++. ..++.++||+|+|.+++.+||+||+.|+++++..
T Consensus 89 ~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~ 168 (1394)
T TIGR00956 89 LTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTP 168 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCC
Confidence 58999999999999999999997421 12499999999887532 2345699999999999999999999999876532
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
..+.+ ...+. +..+..++.+++.+||+++.||.||++.+++|||||||||+||+
T Consensus 169 ~~~~~---~~~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~ 222 (1394)
T TIGR00956 169 QNRPD---GVSRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAE 222 (1394)
T ss_pred CCCCC---CCCHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHH
Confidence 11100 00000 00112346689999999999999999999999999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f 237 (1247)
+|+.+|++++|||||+|||+.++.++++.|+++++..+.++|+++||++++++++||+|++|++|+++|+|+++++.+||
T Consensus 223 aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF 302 (1394)
T TIGR00956 223 ASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYF 302 (1394)
T ss_pred HHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999887556777888888889999999999999999999999999999999
Q ss_pred HhCCCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccC-----------
Q 000867 238 ESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKC----------- 306 (1247)
Q Consensus 238 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 306 (1247)
+++||+||++.|++||+.++.+.++.. .+...+ .....+.+++.+.|++++.+++..++.+...+..
T Consensus 303 ~~lG~~~p~~~n~aDfl~~~~~~~~~~-~~~~~e-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (1394)
T TIGR00956 303 EKMGFKCPDRQTTADFLTSLTSPAERQ-IKPGYE-KKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRE 380 (1394)
T ss_pred HHcCCCCCCCCChHHHHHhccChhhhh-cccccc-ccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHH
Confidence 999999999999999999998765321 111111 1112467889999988876655444432211000
Q ss_pred ----CCCCcccccccccccHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHH
Q 000867 307 ----KSHPAALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGAT 382 (1247)
Q Consensus 307 ----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~ 382 (1247)
+..........+..+.++|+..+.+|.++..+||+..++.++++.+++++++|++|++.+.+. .+...+.|++
T Consensus 381 ~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~~~~r~g~l 457 (1394)
T TIGR00956 381 SHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SDFYSRGGAL 457 (1394)
T ss_pred HHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHH
Confidence 000011123356788999999999999999999999999999999999999999999987543 2345578999
Q ss_pred HHHHHHHHHhhHHHHHHHhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHH
Q 000867 383 FFAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFL 462 (1247)
Q Consensus 383 f~~i~~~~~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l 462 (1247)
|+++++..+.++..+...+.++++|+|||..++|++++|++++.+.++|+.++.+++|++++|||+||++++++|+.+++
T Consensus 458 f~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l 537 (1394)
T TIGR00956 458 FFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLL 537 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHH
Confidence 99999988888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCcc
Q 000867 463 LLLLVNQMASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSW 542 (1247)
Q Consensus 463 ~~~l~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~ 542 (1247)
+.++...++++++.++++++++..+|+.+++++++++++|+||+++.++||.||+|++|+||+.|++++++.|||.+..+
T Consensus 538 ~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~ 617 (1394)
T TIGR00956 538 ILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRF 617 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cccc---C-----------CC----------CccchHHHhhh-cCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 000867 543 RKFT---S-----------NS----------NETLGVQVLKS-RGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQ 597 (1247)
Q Consensus 543 ~~~~---~-----------~~----------~~~~g~~~l~~-~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~~ 597 (1247)
.|.. . .. ..+.|.++|.. +++ ...|.|.+++++++++++|.+++.+++.+.+.
T Consensus 618 ~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~--~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 618 ECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQY--YNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred cccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCc--ccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7741 0 00 12468888884 444 44578999999999999999999999998875
Q ss_pred CCCCcceeecCCcccccCCcCCCCcccccCCCCCCCCCCCCcccccccchhhhhhhhccccccccCcCCCCCccCCCCcE
Q 000867 598 FEKPRAVISDESESNDLGNRIGGTAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHS 677 (1247)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1247)
................. ........+......++.... ....... ....... ......+.....
T Consensus 696 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~e~~~~~-~~~~~~~----~~~~~~~-~~~~~~~~~~~~ 759 (1394)
T TIGR00956 696 AKQKGEILVFRRGSLKR----------AKKAGETSASNKNDIEAGEVL-GSTDLTD----ESDDVND-EKDMEKESGEDI 759 (1394)
T ss_pred cCCCCceEeeccccccc----------hhhcccccccccccccccccC-CCCcccc----ccccccc-cccccccCCCce
Confidence 43332221111100000 000000000000000100000 0000000 0000000 000000011235
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEcCccC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPK 756 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~ 756 (1247)
++|+|++|+++.+ ++++.+|+|||++++|||++||+||||||||||||+|+|+.+.+ +.+|+|.+||.+.
T Consensus 760 l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~ 830 (1394)
T TIGR00956 760 FHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPL 830 (1394)
T ss_pred EEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEEC
Confidence 8999999987422 12457999999999999999999999999999999999987644 4569999999987
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
.. .+++.+|||+|+|.+++.+||+|++.|++.+|.+...+.++++++++++++.+||.++.|+.+|.++ .+|||||||
T Consensus 831 ~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrq 908 (1394)
T TIGR00956 831 DS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRK 908 (1394)
T ss_pred Ch-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhh
Confidence 53 4677899999999999999999999999988877666666777889999999999999999998654 389999999
Q ss_pred HHHHHHHHhhCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC---------------
Q 000867 837 RLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG--------------- 900 (1247)
Q Consensus 837 r~~ia~~l~~~p~-il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~--------------- 900 (1247)
|++||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+++|||+..+++.||+.
T Consensus 909 Rl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~ 988 (1394)
T TIGR00956 909 RLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDL 988 (1394)
T ss_pred HHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCc
Confidence 9999999999997 999999999999999999999999998889999999999999999999981
Q ss_pred ------------CCCcccCCCCCCCCcchhhhccchhhhhhhhhHHHHHhcCHHHHHHHHHHHHhcCCCCCC---CCCCC
Q 000867 901 ------------IPGVENIKDGYNPATWMLEVTAKSQELTLEIDFTDIYKGSELYRRNKALIEELSRPAPGS---KDLYF 965 (1247)
Q Consensus 901 ------------~~~~~~~~~~~npad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~ 965 (1247)
..|..+||+++|||||++|+++...+.....++.+.|+.|+.+++..+.++....+.... .+...
T Consensus 989 ~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1394)
T TIGR00956 989 GENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDA 1068 (1394)
T ss_pred ccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccccc
Confidence 012246899999999999999865443334589999999998877665554443321111 11112
Q ss_pred CCCCCCcHHHHHHHHHHHHhHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Q 000867 966 PTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYC 1045 (1247)
Q Consensus 966 ~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~ 1045 (1247)
..+++.|+|+|+++|++|+++++||||.++++|+++++++|+++|++||+++++ .+++++++|++|+++++.++..
T Consensus 1069 ~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~i~~~~g~~f~~~~~~~~~~- 1144 (1394)
T TIGR00956 1069 LSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQGLQNQMFAVFMATVLFNPLI- 1144 (1394)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHHHHHHH-
Confidence 246889999999999999999999999999999999999999999999999874 6789999999999888777653
Q ss_pred hhhhhhHHhhhHHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccHHH-------HHHHHHHHH
Q 000867 1046 SSVQPVVAVERAVF-CREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAK-------FFWYLFFMF 1117 (1247)
Q Consensus 1046 ~~~~~~~~~er~~~-~rE~~~~~Y~~~~y~~a~~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~-------f~~f~~~~~ 1117 (1247)
..++|.|+.||.+| +||+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+||+.++.. |++|+++++
T Consensus 1145 ~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~ 1224 (1394)
T TIGR00956 1145 QQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLST 1224 (1394)
T ss_pred HHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHH
Confidence 45567888888885 9999999999999999999999999999999999999999999988766 999999999
Q ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCccccc
Q 000867 1118 FSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME 1197 (1247)
Q Consensus 1118 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~~~~ 1197 (1247)
+..++++++|+++++++|+.++|+.+++++++++++||||++++++||.||+|++|+||++|+++|++.|||++.+..|.
T Consensus 1225 ~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~ 1304 (1394)
T TIGR00956 1225 MFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCK 1304 (1394)
T ss_pred HHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887774
Q ss_pred C----------CCcHHHH-------------------------------HHhhcCCCccchhHHHHHHHHHHHHHHHHHH
Q 000867 1198 S----------GETVKQF-------------------------------VRSYFDFKHDFLGVVAVVVAAFAVLFGVLFA 1236 (1247)
Q Consensus 1198 ~----------~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~ 1236 (1247)
. |.+|++| ++..+|++.++.|+|++++++|++++ ++++
T Consensus 1305 ~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~ 1383 (1394)
T TIGR00956 1305 VKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIAT 1383 (1394)
T ss_pred ccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHH
Confidence 2 2233322 33467888899999999999999988 7888
Q ss_pred HHHHhccccc
Q 000867 1237 VGIKRFNFQN 1246 (1247)
Q Consensus 1237 ~~l~~~~~~~ 1246 (1247)
+++.+....+
T Consensus 1384 ~~l~~~~r~~ 1393 (1394)
T TIGR00956 1384 VFFYWLARVP 1393 (1394)
T ss_pred HhhheEEEcC
Confidence 8888764443
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-93 Score=872.67 Aligned_cols=557 Identities=31% Similarity=0.542 Sum_probs=481.4
Q ss_pred CCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEc
Q 000867 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITIS 752 (1247)
Q Consensus 674 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~ 752 (1247)
.+..+.|+|++++.+.+.. ..+++|||||++++|||++|||||||||||||||+|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567999999988754321 3578999999999999999999999999999999999998764 689999999
Q ss_pred CccCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 753 GYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 753 g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
|++.....+++.+|||+|||.++|++||+|+|.|+|.+|+|.+.+.++++++|+++++++||.+|+|+++|+.+.||+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC---------CCC
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG---------IPG 903 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~---------~~~ 903 (1247)
||||||+||.+|++||+||||||||||||+.++.+++++|+++|++|+|||+|+|||++++|++||+. +.|
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G 253 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSEGEVVYSG 253 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999992 122
Q ss_pred c------------ccCCCCCCCCcchhhhccch-hhhhhhhhHHHH------HhcCHHHHHHHHHHHHhcCCCCCCCCCC
Q 000867 904 V------------ENIKDGYNPATWMLEVTAKS-QELTLEIDFTDI------YKGSELYRRNKALIEELSRPAPGSKDLY 964 (1247)
Q Consensus 904 ~------------~~~~~~~npad~~l~~~~~~-~~~~~~~~~~~~------~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 964 (1247)
. .+||+++|||||++|+++.. ..... .+..+. ++..+...+... ...........
T Consensus 254 ~~~~~~~ff~~~G~~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-- 327 (613)
T KOG0061|consen 254 SPRELLEFFSSLGFPCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLE---ALEKSLSTSKK-- 327 (613)
T ss_pred CHHHHHHHHHhCCCCCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHH---HHhhhcccccc--
Confidence 1 14899999999999998843 11100 011111 110111111100 01100000011
Q ss_pred CCCCCCCcHHHHHHHHHHHHhHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Q 000867 965 FPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQY 1044 (1247)
Q Consensus 965 ~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~ 1044 (1247)
.+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+.+.++.+..
T Consensus 328 ~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~~~~~f~~ 404 (613)
T KOG0061|consen 328 VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFILSFMTFLS 404 (613)
T ss_pred cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHHHHHHHHH
Confidence 1111278999999999999999999999999999999999999999999999764 4556689999999999988888
Q ss_pred hhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccHHHHHHHHHHHHHHHHHHH
Q 000867 1045 CSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFT 1124 (1247)
Q Consensus 1045 ~~~~~~~~~~er~~~~rE~~~~~Y~~~~y~~a~~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~ 1124 (1247)
+.+.++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++++++..++++
T Consensus 405 ~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~ 484 (613)
T KOG0061|consen 405 MFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAE 484 (613)
T ss_pred HHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 88778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCccccc-----CC
Q 000867 1125 FYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME-----SG 1199 (1247)
Q Consensus 1125 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~~~~-----~~ 1199 (1247)
++|++++++.||...|+.+++++++.|++|+||+++.++||.||+|++|+|+++|++||++.|||.+....|. +.
T Consensus 485 s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~ 564 (613)
T KOG0061|consen 485 SLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCC 564 (613)
T ss_pred HHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999997444442 11
Q ss_pred CcHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000867 1200 ETVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNFQNR 1247 (1247)
Q Consensus 1200 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1247 (1247)
...++.+....+++..+.|.|+.+++++.++|+++++++|++..+.+|
T Consensus 565 ~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~~ 612 (613)
T KOG0061|consen 565 ESTGEDVLKQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRKR 612 (613)
T ss_pred cccHHHHHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 223344556789999999999999999999999999999998877664
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.1e-90 Score=859.82 Aligned_cols=559 Identities=24% Similarity=0.381 Sum_probs=459.7
Q ss_pred CcEEEEEeEEEEEecCchh----------------hhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhC
Q 000867 675 PHSLTFDEVTYSVDMPKEM----------------KLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG 738 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g 738 (1247)
+..++|.+++|.++..... +...+..+++.+|+|+|++++|||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 5789999999998644200 000112345779999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccc
Q 000867 739 RKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR 818 (1247)
Q Consensus 739 ~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~ 818 (1247)
+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++.
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 876544689999999986543 3456899999999999999999999998887665555666677899999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhh
Q 000867 819 QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 898 (1247)
Q Consensus 819 ~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd 898 (1247)
|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++++|
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 99999877889999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred cCC---------CC------------cccCCCCCCCCcchhhhccchhhh---------hhhhhHHHHHhcCHHHHHHHH
Q 000867 899 EGI---------PG------------VENIKDGYNPATWMLEVTAKSQEL---------TLEIDFTDIYKGSELYRRNKA 948 (1247)
Q Consensus 899 ~~~---------~~------------~~~~~~~~npad~~l~~~~~~~~~---------~~~~~~~~~~~~s~~~~~~~~ 948 (1247)
+.+ .| .-.||+++|||||++|+++.+.+. .....+.+.|++.. .++..+
T Consensus 276 ~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 354 (659)
T PLN03211 276 SVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL-APKVKA 354 (659)
T ss_pred eEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc-cHHHHH
Confidence 821 11 015899999999999998753210 00112233443211 111111
Q ss_pred HHHHh--cC-CCC-----CCCCC-CCCCCCCCcHHHHHHHHHHHHhHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 000867 949 LIEEL--SR-PAP-----GSKDL-YFPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTK 1019 (1247)
Q Consensus 949 ~~~~~--~~-~~~-----~~~~~-~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~ 1019 (1247)
..+.. .. +.. ..+.. .....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|++||+++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-- 431 (659)
T PLN03211 355 AIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-- 431 (659)
T ss_pred HHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 11110 00 000 00000 011235578999999999999988 89999999999999999999999999984
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhhcc
Q 000867 1020 MKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAM 1099 (1247)
Q Consensus 1020 ~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~~~Y~~~~y~~a~~l~~~p~~~~~~~~~~~i~Y~~ 1099 (1247)
..+++++.|++||++++.++.++...++.|+.||++|+||+.+|+|++++|++|++++|+|+.++.+++|++|+|||
T Consensus 432 ---~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m 508 (659)
T PLN03211 432 ---FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWM 508 (659)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEc
Confidence 35688999999999989888887778899999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCccCCCCccchhhhhhhhchHHH
Q 000867 1100 IGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAW 1179 (1247)
Q Consensus 1100 ~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y 1179 (1247)
+||++++++||+|++++++..++++++|+++++++|+..+|+.+++++++++++|+||+++ +||+||+|++|+||++|
T Consensus 509 ~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y 586 (659)
T PLN03211 509 AGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFY 586 (659)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 79999999999999999
Q ss_pred HHHHHHHHhhCCCc-----ccccCCC----cHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000867 1180 TMYGLVASQFGDVE-----DKMESGE----TVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNF 1244 (1247)
Q Consensus 1180 ~~~~l~~n~f~~~~-----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1244 (1247)
++++++.|||++.+ ..|+... ....+ ....+++....|.++++|++|+++|+++++++|++++|
T Consensus 587 ~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~~ 659 (659)
T PLN03211 587 SYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKF-VEEDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIKH 659 (659)
T ss_pred HHHHHHHHhcCCccccccccCCCCcccCCCCCCcc-chhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999998653 2464210 11112 22234445568999999999999999999999998876
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.3e-90 Score=862.46 Aligned_cols=543 Identities=29% Similarity=0.470 Sum_probs=475.5
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCH
Q 000867 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 567999999999999999999999999999999999986543 3589999999987766677889999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG-ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~-~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsg 859 (1247)
+||+.|++.++.+...+.++++++++++++.+||.+++|+.+|+++ .++||||||||++||+||+++|++++|||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999988777777778889999999999999999999764 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcCC---------CCc------------ccCCCCCCCCcchh
Q 000867 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEGI---------PGV------------ENIKDGYNPATWML 918 (1247)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~~---------~~~------------~~~~~~~npad~~l 918 (1247)
||+.++..+++.|++++++|+|||+++|||+.+++++||+.. .|. -.||++.|||||++
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~ 276 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYV 276 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence 999999999999999988899999999999999999999921 111 24899999999999
Q ss_pred hhccchhhhh-----hhhhHHHHHhcCHHHHHHHHHHHHhcCCCC---CCCCCCCCCCCCCcHHHHHHHHHHHHhHHhhc
Q 000867 919 EVTAKSQELT-----LEIDFTDIYKGSELYRRNKALIEELSRPAP---GSKDLYFPTHYTQSFFMQCVACLWKQHWSYWR 990 (1247)
Q Consensus 919 ~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R 990 (1247)
|+++.+.+.. ...++.+.|++|+.+++..+.......+.+ ..........+..+|+.|+..|++|++++.||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R 356 (617)
T TIGR00955 277 QVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLR 356 (617)
T ss_pred HHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhc
Confidence 9987543211 113455667777665544333222111111 11111122457789999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHhhhcCCCCCh
Q 000867 991 NPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSA 1070 (1247)
Q Consensus 991 ~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~~~Y~~ 1070 (1247)
||.++..|+++.+++|+++|++||+++++ .++++++.|++|+++.++++.++....+.++.||++|+||+.+|+|++
T Consensus 357 ~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~ 433 (617)
T TIGR00955 357 DPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRV 433 (617)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCH
Confidence 99999999999999999999999999864 567889999999999988888877777899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 000867 1071 MPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGL 1150 (1247)
Q Consensus 1071 ~~y~~a~~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 1150 (1247)
++|++|++++|+|+.++.+++|.+|+|||+|+++++++||+|++++++..++++++|+++++++|+..+|..++++++.+
T Consensus 434 ~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~ 513 (617)
T TIGR00955 434 SAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIP 513 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCcc-cccCC------CcHHHHHHhhcCCCccchhHHHHH
Q 000867 1151 WNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVED-KMESG------ETVKQFVRSYFDFKHDFLGVVAVV 1223 (1247)
Q Consensus 1151 ~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i 1223 (1247)
+++|+||++++++||+||+|++|+||++|++++++.|||++.+. +|..+ +..++++++.||++.++.|.++++
T Consensus 514 ~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~~~~~~~i 593 (617)
T TIGR00955 514 FLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNADLYLDLIG 593 (617)
T ss_pred HHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcccHHHHHHH
Confidence 99999999999999999999999999999999999999998764 56421 112577778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccC
Q 000867 1224 VAAFAVLFGVLFAVGIKRFNFQNR 1247 (1247)
Q Consensus 1224 l~~~~~~f~~~~~~~l~~~~~~~r 1247 (1247)
|++|.++|+++++++|++...++|
T Consensus 594 l~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 594 LVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999877776
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.4e-88 Score=895.39 Aligned_cols=568 Identities=23% Similarity=0.358 Sum_probs=483.7
Q ss_pred CCCcEEEEEeEEEEEecCchh-------------h--h----ccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHH
Q 000867 673 FEPHSLTFDEVTYSVDMPKEM-------------K--L----QGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLM 733 (1247)
Q Consensus 673 ~~~~~~~~~~l~~~~~~~~~~-------------~--~----~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl 733 (1247)
.+...++|+|+++........ . . .+.+..++.+|+|+|+.++|||+++|+|||||||||||
T Consensus 25 ~~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLL 104 (1394)
T TIGR00956 25 PYKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLL 104 (1394)
T ss_pred CCeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHH
Confidence 345789999998776221100 0 0 01223457799999999999999999999999999999
Q ss_pred HHHhCCCCC--CeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCC----CCCHHHHHHH-
Q 000867 734 DVLAGRKTG--GYITGNITISGYPKKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETQKMF- 804 (1247)
Q Consensus 734 ~~l~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~----~~~~~~~~~~- 804 (1247)
|+|+|+..+ .+.+|+|.+||.+... ..+++.++|++|+|.+++.+||+|++.|++.++.+. ..+.++++++
T Consensus 105 k~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 184 (1394)
T TIGR00956 105 KTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHI 184 (1394)
T ss_pred HHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHH
Confidence 999998532 2468999999987643 234567999999999999999999999998887653 2234443333
Q ss_pred HHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEE
Q 000867 805 IEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVV 883 (1247)
Q Consensus 805 v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi 883 (1247)
++++++.+||.+++|+.+|+...++|||||||||+||++|+.+|+|++|||||+|||+.++..+++.|++++++ |+|||
T Consensus 185 ~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvi 264 (1394)
T TIGR00956 185 ADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPL 264 (1394)
T ss_pred HHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEE
Confidence 56789999999999999999888999999999999999999999999999999999999999999999999864 89999
Q ss_pred EEeccCChHHHHhhhcC---------CCC--------c----ccCCCCCCCCcchhhhccchhhh----------hhhhh
Q 000867 884 CTIHQPSIDIFESFDEG---------IPG--------V----ENIKDGYNPATWMLEVTAKSQEL----------TLEID 932 (1247)
Q Consensus 884 ~~~H~~~~~~~~~fd~~---------~~~--------~----~~~~~~~npad~~l~~~~~~~~~----------~~~~~ 932 (1247)
+++|||+.+++++||+. ..| + -.||++.|||||++|+++.+++. ....+
T Consensus 265 i~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~ 344 (1394)
T TIGR00956 265 VAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQE 344 (1394)
T ss_pred EEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhhhccccccccCCCCHHH
Confidence 99999999999999982 111 1 15899999999999998754211 12357
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCC---------------CCCCCCCCCCCCCCcHHHHHHHHHHHHhHHhhcChhHHHH
Q 000867 933 FTDIYKGSELYRRNKALIEELSRPA---------------PGSKDLYFPTHYTQSFFMQCVACLWKQHWSYWRNPPYTAV 997 (1247)
Q Consensus 933 ~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~ 997 (1247)
+++.|++|+.+++..+.++...... ..++.......|..|+|+|+++|++|+++++||||.+++.
T Consensus 345 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~ 424 (1394)
T TIGR00956 345 FETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLF 424 (1394)
T ss_pred HHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 8999999998876655444321110 0001112234688899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHH
Q 000867 998 RFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAGMYSAMPYAFAQ 1077 (1247)
Q Consensus 998 r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~~~Y~~~~y~~a~ 1077 (1247)
|+++++++|+++|++||+++++ ..+++++.|++||++++.++.++.++ +.+..||++|+||+.+|+|++++|++|+
T Consensus 425 r~~~~ii~~li~G~~F~~~~~~---~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~ 500 (1394)
T TIGR00956 425 MVFGNIIMALILSSVFYNLPKN---TSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIAS 500 (1394)
T ss_pred HHHHHHHHHHHHHHhhcCCCCC---chhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHH
Confidence 9999999999999999999864 46788999999999999999887665 5566899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCC
Q 000867 1078 VMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSILFYGLWNVFSGF 1157 (1247)
Q Consensus 1078 ~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~G~ 1157 (1247)
+++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..+|+.+++++++++++|+||
T Consensus 501 ~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf 580 (1394)
T TIGR00956 501 IISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGF 580 (1394)
T ss_pred HHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCccccc----CC------------------------CcHHHHHHhh
Q 000867 1158 VIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME----SG------------------------ETVKQFVRSY 1209 (1247)
Q Consensus 1158 ~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~~~~----~~------------------------~~~~~~~~~~ 1209 (1247)
++|+++||+||+|++|+||++|+|+|++.|||++.+.+|. .| .++.+|+...
T Consensus 581 ~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~ 660 (1394)
T TIGR00956 581 AIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLS 660 (1394)
T ss_pred ccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhc
Confidence 9999999999999999999999999999999999888773 10 1446788878
Q ss_pred cCCCccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000867 1210 FDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNF 1244 (1247)
Q Consensus 1210 ~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1244 (1247)
||++.+|+|+|++|+++|+++|+++++++++|+++
T Consensus 661 ~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 661 FQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999874
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.9e-87 Score=881.02 Aligned_cols=570 Identities=22% Similarity=0.348 Sum_probs=475.1
Q ss_pred CCcEEEEEeEEEEEec-------Cchh----------h-hcc---ccccccceeeceEEEEeCCeEEEEEcCCCCCHHHH
Q 000867 674 EPHSLTFDEVTYSVDM-------PKEM----------K-LQG---ILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTL 732 (1247)
Q Consensus 674 ~~~~~~~~~l~~~~~~-------~~~~----------~-~~~---~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTL 732 (1247)
+...+.|+|+++..+. |... . ..+ .++.++.+|+|+|+.++|||+++|+||||||||||
T Consensus 128 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTL 207 (1470)
T PLN03140 128 PTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTL 207 (1470)
T ss_pred CCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHH
Confidence 3567999999887652 1100 0 001 12235789999999999999999999999999999
Q ss_pred HHHHhCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCC-------CCHHHH---
Q 000867 733 MDVLAGRKTGG-YITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETQ--- 801 (1247)
Q Consensus 733 l~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~-------~~~~~~--- 801 (1247)
||+|+|+.++. ..+|+|.+||.+......++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 208 Lk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~ 287 (1470)
T PLN03140 208 LLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAG 287 (1470)
T ss_pred HHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhcc
Confidence 99999986532 4689999999987554446779999999999999999999999988763211 111111
Q ss_pred ---------------------HHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000867 802 ---------------------KMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1247)
Q Consensus 802 ---------------------~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgL 860 (1247)
+..++++++.+||.+++|+.+|+...++|||||||||+||++|+.+|+++||||||+||
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGL 367 (1470)
T PLN03140 288 IFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGL 367 (1470)
T ss_pred CCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCc
Confidence 12357899999999999999999888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhcC---------CCCc------------ccCCCCCCCCcchh
Q 000867 861 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEG---------IPGV------------ENIKDGYNPATWML 918 (1247)
Q Consensus 861 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~---------~~~~------------~~~~~~~npad~~l 918 (1247)
|+.++..+++.|+++++ .|+|||+++|||+.+++++||+. ..|. -.||+++|||||++
T Consensus 368 Ds~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~ 447 (1470)
T PLN03140 368 DSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQ 447 (1470)
T ss_pred cHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence 99999999999999976 48999999999999999999982 1111 15899999999999
Q ss_pred hhccchhh-h-----------hhhhhHHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHhH
Q 000867 919 EVTAKSQE-L-----------TLEIDFTDIYKGSELYRRNKALIEELSRPAPGSKDLYFPTHYTQSFFMQCVACLWKQHW 986 (1247)
Q Consensus 919 ~~~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~ 986 (1247)
|+++..+. . ....++++.|++|+.+++..+.++.........+.....+.|..+++.|++.|++|+++
T Consensus 448 ~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~ 527 (1470)
T PLN03140 448 EVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWL 527 (1470)
T ss_pred HhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHH
Confidence 99885432 1 11346888999998876654433221000000111112345889999999999999999
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHhhhcCC
Q 000867 987 SYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCREKGAG 1066 (1247)
Q Consensus 987 ~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~~ 1066 (1247)
.+||||.++..|+++.+++|+++|++||+++.+..+..+.+.+.|++||++++.++.++.++ +.++.||+||+|||.++
T Consensus 528 ~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l-~~~~~~r~vf~ker~~~ 606 (1470)
T PLN03140 528 LMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAEL-ALMIQRLPVFYKQRDLL 606 (1470)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccchhHHhhhcc
Confidence 99999999999999999999999999999986654445566778999999888887776554 77889999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 000867 1067 MYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAAIVSIL 1146 (1247)
Q Consensus 1067 ~Y~~~~y~~a~~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 1146 (1247)
+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..+|+.++++
T Consensus 607 ~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~ 686 (1470)
T PLN03140 607 FHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGAL 686 (1470)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCccc---cc-CCCcHHHHHHhhcCCCcc--chhHH
Q 000867 1147 FYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDK---ME-SGETVKQFVRSYFDFKHD--FLGVV 1220 (1247)
Q Consensus 1147 ~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~~---~~-~~~~~~~~~~~~~~~~~~--~~~~~ 1220 (1247)
+++++++|+||++++++||+||+|++|+||++|+++|+++|||.+..+. |. .....|+.+++.+|++.+ |.|++
T Consensus 687 ~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~ 766 (1470)
T PLN03140 687 VLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIG 766 (1470)
T ss_pred HHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhh
Confidence 9999999999999999999999999999999999999999999776543 21 122345555578999754 56999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccc
Q 000867 1221 AVVVAAFAVLFGVLFAVGIKRFNF 1244 (1247)
Q Consensus 1221 ~~il~~~~~~f~~~~~~~l~~~~~ 1244 (1247)
+++|+||+++|+++++++|++++.
T Consensus 767 ~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 767 VGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-82 Score=778.85 Aligned_cols=541 Identities=25% Similarity=0.434 Sum_probs=476.0
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCH
Q 000867 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
+..+|+|+|+.++|||++.++||+||||||||++|+|..+.. ...|+|.+||++.+...-++.++|+.|+|.|+|.|||
T Consensus 127 ~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTV 206 (1391)
T KOG0065|consen 127 KIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTV 206 (1391)
T ss_pred cceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEE
Confidence 457999999999999999999999999999999999976532 2357999999998765447889999999999999999
Q ss_pred HHHHHHHhhccCCCC----CCHHHHH-HHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000867 781 YESLLYSAWLRLPPE----VDSETQK-MFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 855 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~----~~~~~~~-~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDE 855 (1247)
||+|.|+++++.+.. .++.++. +..+.+++.+||.+|+|++||++..||+||||||||++|.+++.+|+++++||
T Consensus 207 reTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De 286 (1391)
T KOG0065|consen 207 RETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDE 286 (1391)
T ss_pred eehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeec
Confidence 999999999998732 2222222 25778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhcCC---------CC--------c----ccCCCCCCC
Q 000867 856 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDEGI---------PG--------V----ENIKDGYNP 913 (1247)
Q Consensus 856 ptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~~~---------~~--------~----~~~~~~~np 913 (1247)
+|+|||+.|+.++.+.||++++. +.|+++++|||+.++|++||+.+ .| + -.||+..++
T Consensus 287 ~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ 366 (1391)
T KOG0065|consen 287 ITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGT 366 (1391)
T ss_pred ccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCH
Confidence 99999999999999999999854 89999999999999999999921 11 1 158999999
Q ss_pred Ccchhhhccchhhh------------hhhhhHHHHHhcCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 000867 914 ATWMLEVTAKSQEL------------TLEIDFTDIYKGSELYRRNKALIEELSRPAPGSKDLYFPTHYTQSFFMQCVACL 981 (1247)
Q Consensus 914 ad~~l~~~~~~~~~------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~ 981 (1247)
|||+.++++...+. ....++++.|.+|+.+++.....+.........+.....+.|..|+|.|++.|+
T Consensus 367 ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~ 446 (1391)
T KOG0065|consen 367 ADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACT 446 (1391)
T ss_pred HHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHH
Confidence 99999999832111 112579999999999987654433221111222333445679999999999999
Q ss_pred HHHhHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHhhhHHHHh
Q 000867 982 WKQHWSYWRNPPYTAVRFLFTTVIALTFGTMFWDMGTKMKRNQDLFNAMGSMYTAVFFLGAQYCSSVQPVVAVERAVFCR 1061 (1247)
Q Consensus 982 ~R~~~~~~R~~~~~~~r~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~~~~r 1061 (1247)
.|.++.++||..++..+.++.+++|+++|++|++.+. .+..+.+.+.|++||++++..+.++.++ +...+.|+||+|
T Consensus 447 ~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~~~~pv~~K 523 (1391)
T KOG0065|consen 447 IREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTFQRLPVFYK 523 (1391)
T ss_pred HHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHHhhcchHHH
Confidence 9999999999999999999999999999999999983 4567788999999999999999888877 556688999999
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Q 000867 1062 EKGAGMYSAMPYAFAQVMIEIPYIFVLSSVYGIIVYAMIGFEWIAAKFFWYLFFMFFSLLYFTFYGMMTVAMTPNHHIAA 1141 (1247)
Q Consensus 1062 E~~~~~Y~~~~y~~a~~l~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 1141 (1247)
||...+|+|++|.++.+++++|+.++.+++|.+|+||++||.++|++||.|+++++++..|++++++++++++|+...|+
T Consensus 524 hr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An 603 (1391)
T KOG0065|consen 524 HRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIAN 603 (1391)
T ss_pred hhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCccCCCCccchhhhhhhhchHHHHHHHHHHHhhCCCccccc-CCC--------------------
Q 000867 1142 IVSILFYGLWNVFSGFVIPRTRIPLWWRWYYWANPVAWTMYGLVASQFGDVEDKME-SGE-------------------- 1200 (1247)
Q Consensus 1142 ~~~~~~~~~~~l~~G~~i~~~~ip~~~~w~~~~sp~~y~~~~l~~n~f~~~~~~~~-~~~-------------------- 1200 (1247)
.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|. .||
T Consensus 604 ~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G 683 (1391)
T KOG0065|consen 604 LIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLG 683 (1391)
T ss_pred hHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccC
Confidence 99999999999999999999999999999999999999999999999999999986 121
Q ss_pred ----cHHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000867 1201 ----TVKQFVRSYFDFKHDFLGVVAVVVAAFAVLFGVLFAVGIKRFNFQ 1245 (1247)
Q Consensus 1201 ----~~~~~~~~~~~~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1245 (1247)
.+.+|+...|++++.|.|+|++|++||.++|.++..+++.|++.-
T Consensus 684 ~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 684 NDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred ceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 245788888889999999999999999999999999999999854
No 10
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-73 Score=721.29 Aligned_cols=731 Identities=21% Similarity=0.285 Sum_probs=410.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
++||+||.||||||||.+|+|+++.. +|+|.++| .++||||++|++ +.||||||.||..+. .++
T Consensus 549 lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~-ngTvreNILFG~~~d--~~r 612 (1381)
T KOG0054|consen 549 LVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQ-NGTVRENILFGSPYD--EER 612 (1381)
T ss_pred EEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhh-CCcHHHhhhcCcccc--HHH
Confidence 48999999999999999999999864 99999999 599999998766 559999999986553 245
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
|+.+.+.|..++|.+ -|+.++.|.||++++ +|||||||||+||||+|
T Consensus 613 Y~~Vi~aC~L~~Dle--------------------------------~Lp~GD~TeIGErGi-nLSGGQKqRIsLARAVY 659 (1381)
T KOG0054|consen 613 YDKVIKACALKKDLE--------------------------------ILPFGDLTEIGERGI-NLSGGQKQRISLARAVY 659 (1381)
T ss_pred HHHHHHHccCHhHHh--------------------------------hcCCCCcceecCCcc-CCcHhHHHHHHHHHHHh
Confidence 655555555444332 267889999998776 79999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH---HH
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD---FF 237 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~---~f 237 (1247)
+++||++||+|+|++|+++..+|++.+... ..+++|++.+|| .-+..+.+|+|++|++|+|.+.|+.+|+.+ .|
T Consensus 660 ~~adIYLLDDplSAVDahvg~~if~~ci~~--~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~ 736 (1381)
T KOG0054|consen 660 QDADIYLLDDPLSAVDAHVGKHIFEECIRG--LLRGKTVILVTH-QLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDF 736 (1381)
T ss_pred ccCCEEEEcCcchhhhHhhhHHHHHHHHHh--hhcCCEEEEEeC-chhhhhhCCEEEEecCCeEecccCHHHHHhcchhH
Confidence 999999999999999999999999987643 234556666777 457889999999999999999999999873 23
Q ss_pred HhCCCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCCCCCccc---c
Q 000867 238 ESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAAL---T 314 (1247)
Q Consensus 238 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 314 (1247)
+++ ..+........ .....+.......+. +. +...... .+.+.. ...+..+... .
T Consensus 737 ~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~---~~~~~~-~~~~~~~~~~~~~e 794 (1381)
T KOG0054|consen 737 AEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLS---SEEEKS-KDEKEEEDKLVQEE 794 (1381)
T ss_pred HHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhc---cccccc-ccccchhhHHHHHH
Confidence 322 00000000000 000000000000000 00 0000000 000000 0000000000 0
Q ss_pred cccccccHHHHHHHHHHHHHHHhhhChHHHH-HHHHHHHHHHHHHHhhh---ccccCCCCCc---ccccceehHH----H
Q 000867 315 TKMYGVGKKELLKANISRELLLMKRNSFVYI-FKLTQLSSMALVSMTLF---FRTKMHKDSV---SDGGIYVGAT----F 383 (1247)
Q Consensus 315 ~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~-~~~~~~~~~~l~~g~lf---~~~~~~~~~~---~~~~~~~g~~----f 383 (1247)
....+.-.+.....+++ . ........ +.+.........++.-| ++........ .+...|.+.. +
T Consensus 795 e~~~G~v~~~vY~~Y~~----a-~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~ 869 (1381)
T KOG0054|consen 795 ERETGKVSWSVYKKYIK----A-AGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGV 869 (1381)
T ss_pred HHhcCEeeHHHHHHHHH----h-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHH
Confidence 00011111111111110 0 00000000 01111111122222222 2222211111 1222222221 1
Q ss_pred HHHHHHHHhhHHHHHHHhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHH-
Q 000867 384 FAVMMTMFNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFL- 462 (1247)
Q Consensus 384 ~~i~~~~~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l- 462 (1247)
...+.....++.....+......++ -.+.+.+.++|++|++++ +.||++|+|.
T Consensus 870 ~~~~~~~~rs~~~~~~~l~aS~~Lh------------~~ml~~Ilrapm~FFdtT--------------P~GRILNRFSk 923 (1381)
T KOG0054|consen 870 ASSLLTLLRSFLFAKGGLKASRKLH------------DKLLNSILRAPMSFFDTT--------------PTGRILNRFSK 923 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHhCcchhcCCC--------------Cccchhhhccc
Confidence 1111222222222222222222222 236677888999996642 5899999993
Q ss_pred --------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHH
Q 000867 463 --------LLLLVNQMASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVA 534 (1247)
Q Consensus 463 --------~~~l~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~ 534 (1247)
+...+..+...+...++.+ ..++.....+++.+.+++ +++|.-..+|.-.+...
T Consensus 924 D~~~vD~~Lp~~~~~~~~~~~~~l~~~---~vi~~~~P~fli~~~pl~---------------v~~~~~~~~Y~~tsReL 985 (1381)
T KOG0054|consen 924 DIDTVDVLLPFTLEFFLQSLLNVLGIL---VVISYVTPWFLIAIIPLG---------------VIYYFVQRYYLATSREL 985 (1381)
T ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHH---HHhhHHhHHHHHHHHHHH---------------HHHHHHHHHHHHHhHHH
Confidence 1122222222222222221 222222222222222222 22344445555566666
Q ss_pred hhcCCCccccccCCCCccc-hHHHhhhcCccc--------------CCc------chhhHHHH-HHHHHHHHHHHHHHHH
Q 000867 535 NEFFGHSWRKFTSNSNETL-GVQVLKSRGFFP--------------HAY------WYWLGLGA-TIGFVLLFNIGFTLSL 592 (1247)
Q Consensus 535 ~ef~~~~~~~~~~~~~~~~-g~~~l~~~~~~~--------------~~~------~~w~~~~~-li~~~~~~~i~~~~~l 592 (1247)
.+.++.+.++...+.+++. |...+++++... ..+ ..|+++.. ++|.++++.......+
T Consensus 986 kRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl 1065 (1381)
T KOG0054|consen 986 KRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVL 1065 (1381)
T ss_pred HHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666665555544433222 333333333211 111 13655433 1222222222211111
Q ss_pred hhcccCCCCcceeecCCcccccCCcCCCCcccccCCCCCCCCCCCCcccccccchhhhhhhhccccccccCcCCCCCccC
Q 000867 593 TFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSNSSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLP 672 (1247)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1247)
. ......+..+....+.+- .+.+..++.++...+.+....++|++. .+...+++ .+...+..+++..+|
T Consensus 1066 ~-~~~~~~~g~vGLslsyal----~lt~~l~~~vR~~~elEn~m~SVERv~---eY~~~~~E---~p~~~~~~~pp~~WP 1134 (1381)
T KOG0054|consen 1066 L-PSGLISPGLVGLSLSYAL----QLTGLLQWLVRQSSELENNMVSVERVL---EYTDIPSE---APLEIEESRPPPSWP 1134 (1381)
T ss_pred c-cCCCCCcchHHHHHHHHH----HHHHHHHHHHHHHHHHHhcchhhhHHH---HHhcCCCC---CCCCCcCCCCCCCCC
Confidence 1 110000111000000000 011112222222112222222333221 12121111 111111122233444
Q ss_pred CCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEc
Q 000867 673 FEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS 752 (1247)
Q Consensus 673 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~ 752 (1247)
..+.++|+|++.+|.. +...+|||||++|+|||++||+|++|||||||+++|.+... +.+|+|.||
T Consensus 1135 -~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~ID 1200 (1381)
T KOG0054|consen 1135 -SKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILID 1200 (1381)
T ss_pred -CCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEc
Confidence 4578999999877742 23469999999999999999999999999999999998765 357999999
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccccccc------
Q 000867 753 GYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVG------ 823 (1247)
Q Consensus 753 g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------ 823 (1247)
|.++.+ .+.|++++.+||||.+|. -|+|.|| ++..+..|+.++++|+..+|.+...+..+
T Consensus 1201 gvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v 1269 (1381)
T KOG0054|consen 1201 GVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEV 1269 (1381)
T ss_pred CeecccccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCcee
Confidence 999865 467788999999999875 3666666 56667777889999999888765443332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
.+++.++|.||||.+|+||||+++++||+|||+|+++|++|+..|+++||+..+ +||||+++|+.+.
T Consensus 1270 ~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~T 1336 (1381)
T KOG0054|consen 1270 SEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNT 1336 (1381)
T ss_pred cCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccch
Confidence 245678999999999999999999999999999999999999999999999774 7999999999864
No 11
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-71 Score=677.89 Aligned_cols=548 Identities=30% Similarity=0.494 Sum_probs=455.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
++|||||+||||||||++|+|+...+...+|+|++||++.+....++.+|||.|||.+++++||+|++.|+|+++-+.+
T Consensus 58 l~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~- 136 (613)
T KOG0061|consen 58 LLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS- 136 (613)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-
Confidence 5899999999999999999999987557899999999888777778899999999999999999999999998864321
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
. ..++.+++++++++.+||.+|+||.||+...+++||||||||+||..|+
T Consensus 137 ------~------------------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell 186 (613)
T KOG0061|consen 137 ------L------------------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELL 186 (613)
T ss_pred ------C------------------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHH
Confidence 1 1233455789999999999999999999988999999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHhC
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~~ 240 (1247)
.||+||+|||||||||+.++.++++.|+++++. ++++|+++|||+.+++++||++++|++|+++|+|+++++.+||+++
T Consensus 187 ~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~ 265 (613)
T KOG0061|consen 187 TDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSL 265 (613)
T ss_pred cCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhC
Confidence 999999999999999999999999999999986 8999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCCCCCcccccccccc
Q 000867 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHPAALTTKMYGV 320 (1247)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1247)
|++||++.||+||+.++.+.++......+. .......+.++......+..+......... .........
T Consensus 266 G~~~P~~~Npadf~l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 334 (613)
T KOG0061|consen 266 GFPCPELENPADFLLDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSP 334 (613)
T ss_pred CCCCCCcCChHHHHHHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCC
Confidence 999999999999999977643100000000 000000000100000000000000000000 000111167
Q ss_pred cHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHHHhhHH-HHHH
Q 000867 321 GKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGMS-DISM 399 (1247)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~~-~~~~ 399 (1247)
+++.|+..+.+|.+...+|++.....+..+...+++++|.+|++.+.+... .....|++++.+....+..+. .+..
T Consensus 335 s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~~~~~~~~~f~~~~~~i~~ 411 (613)
T KOG0061|consen 335 SWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLFFFILSFMTFLSMFGAVPV 411 (613)
T ss_pred cHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 889999999999999999999999999999999999999999998543322 224567777777766565554 5677
Q ss_pred HhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000867 400 TIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALFRFIA 479 (1247)
Q Consensus 400 ~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~~~~~~~~i~ 479 (1247)
...++++|.||+..++|+.++|++++.+.++|+.++.+++|+.++|||+|++++..+|+.+.++.++...++++++.+++
T Consensus 412 f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~ 491 (613)
T KOG0061|consen 412 FPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFIS 491 (613)
T ss_pred hHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCccccccC--CCCccchHHH
Q 000867 480 AAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTS--NSNETLGVQV 557 (1247)
Q Consensus 480 ~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~--~~~~~~g~~~ 557 (1247)
+..++...+..+++++++.+++++||+++.+.+|.||.|+.|+|+.+|++++++.|+|.+....|... ..+...|.++
T Consensus 492 ~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~ 571 (613)
T KOG0061|consen 492 AIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDV 571 (613)
T ss_pred HhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998744444433 3456668899
Q ss_pred hhhcCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 000867 558 LKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLN 596 (1247)
Q Consensus 558 l~~~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~ 596 (1247)
+...++...+ .|.++.++.++.++|++.+++++++..
T Consensus 572 l~~~~~~~~~--~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 572 LKQLGFEDSS--FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred HHhcCCcccc--cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9998886654 588999999999999999999887653
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.3e-70 Score=683.33 Aligned_cols=551 Identities=24% Similarity=0.385 Sum_probs=451.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++||+|||.|+++++.....
T Consensus 53 ~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 132 (617)
T TIGR00955 53 LLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRV 132 (617)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCC
Confidence 58999999999999999999998875446899999999876545567899999999999999999999999876532110
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCc-cccccccccchhHHHHHH
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEM-VRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~-~~~LSGGqrqRvsiA~al 159 (1247)
. .++.+..++++++.+||.++.||.||++. .++|||||||||+|||+|
T Consensus 133 -------~------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL 181 (617)
T TIGR00955 133 -------T------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASEL 181 (617)
T ss_pred -------C------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHH
Confidence 0 01123357889999999999999999863 688999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHh
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFES 239 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~ 239 (1247)
+++|++++|||||+|||+.++.++++.|+++++ .+.++|+++||++.+++++||++++|++|+++|+|+++++.+||++
T Consensus 182 ~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~ 260 (617)
T TIGR00955 182 LTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSD 260 (617)
T ss_pred HcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999875 4677888888888899999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCC---CCCcccccc
Q 000867 240 MGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCK---SHPAALTTK 316 (1247)
Q Consensus 240 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 316 (1247)
+|++||++.|++|++.++.+....... . ...+.+++.+.++.++..++..++......... .........
T Consensus 261 ~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (617)
T TIGR00955 261 LGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGI 333 (617)
T ss_pred cCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhhhhcccccccccccccccc
Confidence 999999999999999988764321110 0 001223444455444333332222111100000 000011123
Q ss_pred cccccHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHHHhhH-H
Q 000867 317 MYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMFNGM-S 395 (1247)
Q Consensus 317 ~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~~~~~-~ 395 (1247)
.+..+...|+..+.+|.+...+|++..+..++.+.+++++++|++|++.+.+. .+.....|++|+.++...+.++ .
T Consensus 334 ~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~~g~lf~~~~~~~f~~~~~ 410 (617)
T TIGR00955 334 GYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNINGALFLFLTNMTFQNVFP 410 (617)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999876432 2233456777877776666654 3
Q ss_pred HHHHHhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHH
Q 000867 396 DISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQMASALF 475 (1247)
Q Consensus 396 ~~~~~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~~~~~~ 475 (1247)
.+.....++++++||+..++|++.+|++++.+.++|+.++.+++|.+++|||+|+++++++|+.++++.++...+..+++
T Consensus 411 ~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~ 490 (617)
T TIGR00955 411 VINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFG 490 (617)
T ss_pred HHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCcc-ccccCCC---Cc
Q 000867 476 RFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSW-RKFTSNS---NE 551 (1247)
Q Consensus 476 ~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~-~~~~~~~---~~ 551 (1247)
.++++++++..+|..+++++++++++|+||+++.++||.||+|++|+||+.|++++++.|||.+..+ .|...+. +.
T Consensus 491 ~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~ 570 (617)
T TIGR00955 491 YLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCP 570 (617)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988765 4432221 23
Q ss_pred cchHHHhhhcCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 000867 552 TLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFL 595 (1247)
Q Consensus 552 ~~g~~~l~~~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~ 595 (1247)
..|.++++.+++... ++|.++++++++.++|.+++++++++.
T Consensus 571 ~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 571 SSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred cChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458899999988664 358999999999999999999988753
No 13
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.2e-69 Score=669.93 Aligned_cols=548 Identities=21% Similarity=0.352 Sum_probs=426.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+|||||||||||++|+|+.+|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++....
T Consensus 96 ~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~- 172 (659)
T PLN03211 96 ILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS- 172 (659)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-
Confidence 47999999999999999999998874 3589999999887532 24569999999999999999999999875432100
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
.. .++.++.++++++.+||+++.||.||++..++|||||||||+||++|+
T Consensus 173 ------~~------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 173 ------LT------------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred ------CC------------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 00 011223467889999999999999999999999999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHhC
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFESM 240 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~~ 240 (1247)
.+|+|++|||||+|||+.++.++++.|+++++ .++++|+++||+..++.++||++++|++|+++++|+.+++.+||+++
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~ 301 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESV 301 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHC
Confidence 99999999999999999999999999999875 45677776666666899999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcC---CcccCC-----CCCc-
Q 000867 241 GFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRT---PFDKCK-----SHPA- 311 (1247)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~- 311 (1247)
||+||++.||+||+.++.+.........+.+.+ ...+++.+.|++... ++...+.+. .....+ ....
T Consensus 302 G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (659)
T PLN03211 302 GFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEH 377 (659)
T ss_pred CCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhccccccc
Confidence 999999999999999988653211000000000 011223333322110 000000000 000000 0000
Q ss_pred ccccccccccHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHHH
Q 000867 312 ALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTMF 391 (1247)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~~ 391 (1247)
......+..+++.|+..+++|.+.. +|++.....++.+.+++++++|++|++.+ ..+...+.|++|+.+++..+
T Consensus 378 ~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~ 451 (659)
T PLN03211 378 RSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGV 451 (659)
T ss_pred ccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 0011123467889999999999887 78777778899999999999999999863 12344567888888766544
Q ss_pred -hhHHHHHHHhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHH
Q 000867 392 -NGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQM 470 (1247)
Q Consensus 392 -~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~ 470 (1247)
..+..+.....++++++|||..++|++.+|++++.+.++|+.++.+++|+.++|||+|+++++++|+.++++.++...+
T Consensus 452 ~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~ 531 (659)
T PLN03211 452 FPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLV 531 (659)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4456677777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCc-----cccc
Q 000867 471 ASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHS-----WRKF 545 (1247)
Q Consensus 471 ~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~-----~~~~ 545 (1247)
+++++.++++++++..+|+.+++++++++++|+||+++ +||.||+|++|+||+.|++++++.|||.+.. +.|.
T Consensus 532 ~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~ 609 (659)
T PLN03211 532 SQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCS 609 (659)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCC
Confidence 99999999999999999999999999999999999996 7999999999999999999999999997643 2332
Q ss_pred cCCCCccchHHHhhhcCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 000867 546 TSNSNETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLN 596 (1247)
Q Consensus 546 ~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~ 596 (1247)
........++.++...... ....|.+++++++++++++++++++++..+
T Consensus 610 ~~~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 610 LPHGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred CcccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2111000111122222222 224688999999999999999998887543
No 14
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-70 Score=670.40 Aligned_cols=197 Identities=29% Similarity=0.425 Sum_probs=164.4
Q ss_pred cCCCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEE
Q 000867 671 LPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT 750 (1247)
Q Consensus 671 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~ 750 (1247)
.|...+.++++||+++|+..+ +.+||+|+|++|++|+.+||+|||||||||.+.+|-+..+ +..|.|.
T Consensus 981 ~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V~ 1048 (1228)
T KOG0055|consen 981 LPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKVK 1048 (1228)
T ss_pred cccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEE
Confidence 344567899999999997543 4579999999999999999999999999999999987655 4589999
Q ss_pred EcCccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHH-------cCCCccccc
Q 000867 751 ISGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMEL-------VELNPLRQS 820 (1247)
Q Consensus 751 i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~-------l~l~~~~~~ 820 (1247)
|||.+++. ...|+.+|.|.|+|.||. -|++||+.|+. . +.+.++ +.++++. .+|.+-.||
T Consensus 1049 IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aak~ANaH~FI~sLP~GyDT 1118 (1228)
T KOG0055|consen 1049 IDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAAKLANAHNFISSLPQGYDT 1118 (1228)
T ss_pred ECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHHHHhhhHHHHhcCcCcccC
Confidence 99999865 346788999999999986 59999999981 1 133333 3334443 345566789
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 821 ~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
.+|..+ .+||||||||++||||+++||+||+|||+||.||+++.+.++++|.+. ..|||.|+++|++|.
T Consensus 1119 ~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLST 1187 (1228)
T KOG0055|consen 1119 RVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLST 1187 (1228)
T ss_pred ccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchhh
Confidence 998654 479999999999999999999999999999999999999999999985 468999999999973
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.6e-64 Score=662.63 Aligned_cols=201 Identities=28% Similarity=0.410 Sum_probs=172.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++. .++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 5889999887631 124699999999999999999999999999999999998763 489999999887
Q ss_pred Cc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 757 KQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.+||.+..|+.++ .|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHH
Confidence 43 2235679999999999999999999998776653 2334445678899999999998888764 699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+||+.+|+|++|||||+|||+.+++.+++.|+++.++|+|||+|+|++. ++-.+.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDr 2139 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTR 2139 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998777999999999985 55666777
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.8e-65 Score=682.10 Aligned_cols=197 Identities=23% Similarity=0.294 Sum_probs=163.4
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
.+.++|+|++++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..++ .+|+|.|||.
T Consensus 1235 ~g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~ 1301 (1622)
T PLN03130 1235 SGSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGC 1301 (1622)
T ss_pred CCcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCE
Confidence 357999999998841 123699999999999999999999999999999999998763 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 824 (1247)
++.. ..+|+.+++|||++.++.. |+||||.+.. .. .++.++++++..++.+. .|+.+|.
T Consensus 1302 dI~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge 1370 (1622)
T PLN03130 1302 DISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSE 1370 (1622)
T ss_pred ecccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccC
Confidence 8764 4567889999999999975 9999996531 11 23346777777776543 3555654
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.+||||||||+||||||+++|+||+||||||+||++++..|++.|++.. +++|||+++|+++. ...+|+
T Consensus 1371 -~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~t--I~~~Dr 1441 (1622)
T PLN03130 1371 -AGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDR 1441 (1622)
T ss_pred -CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHH--HHhCCE
Confidence 345799999999999999999999999999999999999999999999875 58999999999864 445787
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.5e-64 Score=672.75 Aligned_cols=196 Identities=22% Similarity=0.289 Sum_probs=162.8
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
+.++|+|++++++. +.+++|+|+|++|+|||++||+||||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 57999999998841 224699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+.+ ..+|+.++||||++.+++. |+||||.+.. ..+ ++.++++++..++.+. .|+.+|.
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e- 1367 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSE- 1367 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecC-
Confidence 754 4567889999999999975 9999996431 122 3346778887777543 3555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.+||||||||++|||||+++|+||+||||||+||++++..|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~Dr 1438 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDK 1438 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCE
Confidence 345799999999999999999999999999999999999999999999875 5799999999984 3455787
No 18
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.5e-62 Score=659.42 Aligned_cols=197 Identities=19% Similarity=0.225 Sum_probs=163.0
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
.+.++|+|++++++. +...+|+|||++|+|||++||+||||||||||+++|.|..++ .+|+|.|||.
T Consensus 1282 ~g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~ 1348 (1522)
T TIGR00957 1282 RGRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGL 1348 (1522)
T ss_pred CCcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCE
Confidence 357999999999852 123599999999999999999999999999999999998663 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 824 (1247)
|+.. ..+|+.++||||++.+++. |+||||.... ..+ ++.++++++..++.+. .|+.+|.
T Consensus 1349 dI~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e 1417 (1522)
T TIGR00957 1349 NIAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAE 1417 (1522)
T ss_pred EccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecC
Confidence 9764 4567889999999999975 9999995211 122 3346778888877643 3555554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1418 -~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~Dr 1488 (1522)
T TIGR00957 1418 -GGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTR 1488 (1522)
T ss_pred -CCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCE
Confidence 345799999999999999999999999999999999999999999999865 5799999999985 3455777
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.1e-60 Score=632.89 Aligned_cols=201 Identities=18% Similarity=0.309 Sum_probs=165.2
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC------------
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 743 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~------------ 743 (1247)
..++|+||+|+|+.. +++++|+|+|++|+||+++||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999998521 1246999999999999999999999999999999999975531
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCcCH
Q 000867 744 ----------------------------------------YITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 744 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
+.+|+|.+||.++.. ..+++.+|||+|++.+|+ .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 147999999998754 456788999999999985 799
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~l 853 (1247)
+||+.|+. + +.+. +.++++++..++.+ -.||.+|. .+..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998862 1 2232 23666666666543 34778874 3457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEeccCChHHHHhhhc
Q 000867 854 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 854 DEptsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+||+++++.|++.|+++. .+++|+|+++|+++ ..+..|+
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~ 1427 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDK 1427 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCE
Confidence 99999999999999999999875 36899999999984 4566777
No 20
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.2e-60 Score=636.87 Aligned_cols=196 Identities=20% Similarity=0.256 Sum_probs=164.2
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
.+.++|+||+++++. +.+.+|+|+|++|+|||++||+|+||||||||+++|.|..+ .+|+|.|||.
T Consensus 1215 ~g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~ 1280 (1490)
T TIGR01271 1215 GGQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGV 1280 (1490)
T ss_pred CCeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCE
Confidence 357999999998852 22469999999999999999999999999999999999864 3799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 824 (1247)
++.. ..+++.++||||++.+++. |+||||.... +..++.++++++..+|.+. .|+.+|.
T Consensus 1281 di~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e 1349 (1490)
T TIGR01271 1281 SWNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD 1349 (1490)
T ss_pred EcccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCcccccccccc
Confidence 9764 3467889999999999985 9999994321 1124457888888888643 3555654
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.+||||||||+||||||+++|+||+||||||+||.++...|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1350 -~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~Dr 1420 (1490)
T TIGR01271 1350 -GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQ 1420 (1490)
T ss_pred -CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCE
Confidence 446799999999999999999999999999999999999999999999875 4799999999984 4556887
No 21
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.6e-60 Score=636.08 Aligned_cols=196 Identities=24% Similarity=0.268 Sum_probs=163.8
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
+.++|+|++++++. +...+|+||||+|+|||++||+|+||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEE
Confidence 57999999998842 123599999999999999999999999999999999998763 47999999999
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+.. ..+++.++||||++.+++. |+||||... ...+ ++.++++++..++.+. .|+.+|.
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge- 1441 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLE- 1441 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccC-
Confidence 764 4567889999999999875 999999431 1122 3457888888888654 3556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~-p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.+||||||||+||||||+++ |+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1442 ~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~Dr 1513 (1560)
T PTZ00243 1442 GGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDK 1513 (1560)
T ss_pred CcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCE
Confidence 3467999999999999999996 89999999999999999999999999865 4799999999984 5567887
No 22
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.7e-58 Score=532.25 Aligned_cols=444 Identities=25% Similarity=0.305 Sum_probs=328.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC-CceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK-LKFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLAF 70 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~-~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~--~~~~~lTv~e~l~f 70 (1247)
+++|+|.|||||||+.++|.|.+++. ...+|+|.++|+++..... .+.++|++|++ .|-|-+||.+.|.-
T Consensus 37 ~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E 116 (539)
T COG1123 37 ILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIRE 116 (539)
T ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHH
Confidence 47999999999999999999999876 3468999999987643322 26799999995 45666899999877
Q ss_pred HHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000867 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1247)
....++... .++++..+.++|+.+||++.... ++.++.||||||
T Consensus 117 ~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~r 160 (539)
T COG1123 117 ALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMR 160 (539)
T ss_pred HHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHH
Confidence 655443110 12334456789999999986654 678999999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
|||.||+||+.+|++|++||||++||+.++.+|++.|+++.++ .++.++.++|+..-+.++||||+||.+|++++.|++
T Consensus 161 QRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 161 QRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 9999999999999999999999999999999999999998764 578888899999999999999999999999999998
Q ss_pred chHHHHHHhCCCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCCCCC
Q 000867 231 ELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHP 310 (1247)
Q Consensus 231 ~~~~~~f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1247)
+++.+.+ .+ |
T Consensus 240 ~~i~~~p--------~h-------------------------p------------------------------------- 249 (539)
T COG1123 240 EEILSNP--------QH-------------------------P------------------------------------- 249 (539)
T ss_pred HHHHhcc--------CC-------------------------c-------------------------------------
Confidence 8875310 00 0
Q ss_pred cccccccccccHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHH
Q 000867 311 AALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTM 390 (1247)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~ 390 (1247)
|.. .++
T Consensus 250 -------YT~-------~Ll------------------------------------------------------------ 255 (539)
T COG1123 250 -------YTR-------GLL------------------------------------------------------------ 255 (539)
T ss_pred -------ccH-------HHH------------------------------------------------------------
Confidence 000 000
Q ss_pred HhhHHHHHHHhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHH
Q 000867 391 FNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQM 470 (1247)
Q Consensus 391 ~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~ 470 (1247)
...|.....+
T Consensus 256 -----------~a~p~~~~~~----------------------------------------------------------- 265 (539)
T COG1123 256 -----------AAVPRLGDEK----------------------------------------------------------- 265 (539)
T ss_pred -----------hhCCCccccc-----------------------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCccccccCCCC
Q 000867 471 ASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTSNSN 550 (1247)
Q Consensus 471 ~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~~~~ 550 (1247)
..
T Consensus 266 -------------------------------------------------------------------------~~----- 267 (539)
T COG1123 266 -------------------------------------------------------------------------II----- 267 (539)
T ss_pred -------------------------------------------------------------------------cc-----
Confidence 00
Q ss_pred ccchHHHhhhcCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeecCCcccccCCcCCCCcccccCCCC
Q 000867 551 ETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSN 630 (1247)
Q Consensus 551 ~~~g~~~l~~~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1247)
+
T Consensus 268 --------------------~----------------------------------------------------------- 268 (539)
T COG1123 268 --------------------R----------------------------------------------------------- 268 (539)
T ss_pred --------------------c-----------------------------------------------------------
Confidence 0
Q ss_pred CCCCCCCCcccccccchhhhhhhhccccccccCcCCCCCccCCCCcEEEEEeEEEEEecCchhhhccccccccceeeceE
Q 000867 631 SSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVS 710 (1247)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs 710 (1247)
... . . . .....-++.+|++..+..+.... ....+...+++|||
T Consensus 269 ~~~------~-----------------~--~----------~~~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VS 311 (539)
T COG1123 269 LPR------R-----------------G--P----------LRAEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVS 311 (539)
T ss_pred ccc------c-----------------c--c----------cccCceeEeeeeeeeeccccccc--cccccceeeeeeee
Confidence 000 0 0 0 00012355666655554322110 00112356999999
Q ss_pred EEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC--Cc---ccccceEEEeccC--CCCCCCcCHHHH
Q 000867 711 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK--KQ---ETFTRISGYCEQN--DIHSPFVTVYES 783 (1247)
Q Consensus 711 ~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~~~v~q~--~~~~~~ltv~e~ 783 (1247)
|++++||++||+|+||||||||.++|+|..++ .+|.|.++|.+. +. ...++.+-+++|| ..+.|.+||++.
T Consensus 312 f~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~ 389 (539)
T COG1123 312 FDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDI 389 (539)
T ss_pred eEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHH
Confidence 99999999999999999999999999998764 479999999762 11 1233445556666 567899999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 000867 784 LLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 862 (1247)
Q Consensus 784 l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~ 862 (1247)
+.-....... ....++++++.++++.+||.+ ..+.+ +.+||||||||++|||||+.+|++|++|||||.||+
T Consensus 390 i~epL~~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDv 462 (539)
T COG1123 390 LAEPLRIHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDV 462 (539)
T ss_pred HHhHHhhhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCH
Confidence 9765543322 224566678999999999985 34444 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 863 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 863 ~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..+..+.++|+++.++ |.|.|+++||... +-+.-|+
T Consensus 463 svqa~VlnLl~~lq~e~g~t~lfISHDl~v-V~~i~dr 499 (539)
T COG1123 463 SVQAQVLNLLKDLQEELGLTYLFISHDLAV-VRYIADR 499 (539)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEeCCHHH-HHhhCce
Confidence 9999999999998755 9999999999752 3333455
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.2e-58 Score=561.29 Aligned_cols=187 Identities=21% Similarity=0.345 Sum_probs=153.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1247)
+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... ..++.+||++|++ .+++.
T Consensus 267 ~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 344 (501)
T PRK10762 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLG 344 (501)
T ss_pred CcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCC
Confidence 79999999999999999999999999999999998653 479999999876431 1345689999995 57788
Q ss_pred cCHHHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000867 778 VTVYESLLYSAWLRLP---PEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~---~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~l 853 (1247)
+||.|++.+....... .....+..++.++++++.+|+. +..++.++ .||||||||++||++|+.+|++|+|
T Consensus 345 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGekqrv~lA~al~~~p~lllL 419 (501)
T PRK10762 345 MSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIG-----LLSGGNQQKVAIARGLMTRPKVLIL 419 (501)
T ss_pred CcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999875311100 0012233345688999999995 56676654 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 854 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 854 DEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 420 DEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~ 464 (501)
T PRK10762 420 DEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDR 464 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCE
Confidence 9999999999999999999999877999999999985 45556666
No 24
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-58 Score=562.25 Aligned_cols=190 Identities=23% Similarity=0.358 Sum_probs=153.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHS 775 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~ 775 (1247)
+.+|+|+||+|++||++||+||||||||||+++|+|..++ +.+|+|.++|.++... ..++.++|++|+. .++
T Consensus 275 ~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 353 (506)
T PRK13549 275 IKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIV 353 (506)
T ss_pred cccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCc
Confidence 3599999999999999999999999999999999997641 1379999999875421 1234589999985 467
Q ss_pred CCcCHHHHHHHHhhccCCC--CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 000867 776 PFVTVYESLLYSAWLRLPP--EVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIF 852 (1247)
Q Consensus 776 ~~ltv~e~l~~~~~~~~~~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~ 852 (1247)
+.+||.|++.+........ ..+.+..+++++++++.+++. +..+..++ .|||||||||+||+||+.+|++|+
T Consensus 354 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrv~lA~al~~~p~lll 428 (506)
T PRK13549 354 PVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIA-----RLSGGNQQKAVLAKCLLLNPKILI 428 (506)
T ss_pred CCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccc-----cCCHHHHHHHHHHHHHhhCCCEEE
Confidence 8899999998753211110 012233445688999999996 46676653 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 853 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 853 lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 429 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~ 474 (506)
T PRK13549 429 LDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDR 474 (506)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999998878999999999985 45566676
No 25
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-58 Score=562.89 Aligned_cols=187 Identities=21% Similarity=0.335 Sum_probs=152.6
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQN---DIHSPF 777 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~---~~~~~~ 777 (1247)
+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... ..++.+||++|+ ..+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 355 (510)
T PRK09700 278 KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN 355 (510)
T ss_pred cccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCC
Confidence 89999999999999999999999999999999998653 479999999876431 224568999998 457888
Q ss_pred cCHHHHHHHHhhcc---CCC--C-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcE
Q 000867 778 VTVYESLLYSAWLR---LPP--E-VDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSI 850 (1247)
Q Consensus 778 ltv~e~l~~~~~~~---~~~--~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~i 850 (1247)
+||.|++.+....+ ... . ......++.++++++.+|+. +..++.++ .|||||||||+|||+|+.+|++
T Consensus 356 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~lAral~~~p~l 430 (510)
T PRK09700 356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNIT-----ELSGGNQQKVLISKWLCCCPEV 430 (510)
T ss_pred CcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccc-----cCChHHHHHHHHHHHHhcCCCE
Confidence 99999997653211 000 0 11222335678899999996 66777654 6999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 851 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 851 l~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+|||||+|||+.+...+.+.|++++++|.|||+++|++. .+.+..|+
T Consensus 431 LlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~ 478 (510)
T PRK09700 431 IIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDR 478 (510)
T ss_pred EEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCE
Confidence 9999999999999999999999998877999999999985 44555666
No 26
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-57 Score=565.33 Aligned_cols=211 Identities=20% Similarity=0.200 Sum_probs=166.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-++++|+++.++...... ......+.+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 313 ~L~~~~l~~~y~~~~~~~--~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGLL--NRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCccc--cccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEEC
Confidence 488999988774210000 0000124699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000867 757 KQE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1247)
Q Consensus 757 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 827 (1247)
... .+++.++|++|++ .+++.+||.|++.+....+. ....+..++++.++++.+||. +..+..+
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~----- 461 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP----- 461 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----
Confidence 421 2345789999997 57889999999987643321 112334456788999999996 4556654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|||+++|+++ .+.+..|+
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dr 533 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHR 533 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 479999999999999999999999999999999999999999999998765 899999999986 34556676
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.3e-57 Score=557.91 Aligned_cols=202 Identities=22% Similarity=0.315 Sum_probs=159.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEc-Ccc-
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 755 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~-g~~- 755 (1247)
++++|+++.++.. ..+++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCcc
Confidence 6677777765310 01124699999999999999999999999999999999998653 47999996 532
Q ss_pred --CCc------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-----cccccc
Q 000867 756 --KKQ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-----LRQSLV 822 (1247)
Q Consensus 756 --~~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~ 822 (1247)
... ...++.+||++|++.+++.+||.|++.+...+. ...+..+++++++++.+||.+ ..++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 425 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP 425 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh
Confidence 111 112456899999998889999999998754321 122333456788999999975 345544
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 823 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 823 g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..|||||||||+|||||+.+|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+..|+
T Consensus 426 -----~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~ 497 (520)
T TIGR03269 426 -----DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDR 497 (520)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998754 899999999986 35556676
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.6e-57 Score=555.20 Aligned_cols=190 Identities=21% Similarity=0.349 Sum_probs=154.2
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CCC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFTRISGYCEQND---IHS 775 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~---~~~ 775 (1247)
+.+|+|+||++++||+++|+||||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .++
T Consensus 273 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~ 351 (500)
T TIGR02633 273 RKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIV 351 (500)
T ss_pred ccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcC
Confidence 3589999999999999999999999999999999998642 137999999987642 12345689999995 578
Q ss_pred CCcCHHHHHHHHhh--ccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 000867 776 PFVTVYESLLYSAW--LRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIF 852 (1247)
Q Consensus 776 ~~ltv~e~l~~~~~--~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~ 852 (1247)
+.+||+|++.+... ............++.++++++.+++.+ ..++.++ .||||||||++|||+|+.+|++|+
T Consensus 352 ~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lll 426 (500)
T TIGR02633 352 PILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIG-----RLSGGNQQKAVLAKMLLTNPRVLI 426 (500)
T ss_pred CCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccc-----cCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999987532 110001122334456889999999964 4566653 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 853 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 853 lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+|||+.++..+++.|++++++|.|||+++|++. .+.+..|+
T Consensus 427 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~ 472 (500)
T TIGR02633 427 LDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDR 472 (500)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999998878999999999985 45555666
No 29
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.8e-57 Score=555.67 Aligned_cols=187 Identities=20% Similarity=0.242 Sum_probs=151.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1247)
+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+. .+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~ 355 (510)
T PRK15439 278 GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLD 355 (510)
T ss_pred CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCC
Confidence 68999999999999999999999999999999997653 479999999876431 1234689999984 47788
Q ss_pred cCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000867 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEp 856 (1247)
+|+.|++......+..........++.++++++.+|+. +..++.+ +.|||||||||+||++|+.+|++|+||||
T Consensus 356 ~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEP 430 (510)
T PRK15439 356 APLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEP 430 (510)
T ss_pred CcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCC
Confidence 99999986421111110011222345678999999997 6667665 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 857 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+|||+.+...+.+.|++++++|.|||+++|++. .+.+..|+
T Consensus 431 t~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~ 472 (510)
T PRK15439 431 TRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADR 472 (510)
T ss_pred CcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 9999999999999999999877999999999985 45566676
No 30
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.5e-57 Score=555.94 Aligned_cols=187 Identities=24% Similarity=0.318 Sum_probs=153.5
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc------cccceEEEeccCC--CC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFTRISGYCEQND--IH 774 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~--~~ 774 (1247)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|+. .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999864 379999999875421 1245689999996 47
Q ss_pred CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000867 775 SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1247)
Q Consensus 775 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~l 853 (1247)
++.+||+|++.+....+.. ..+....+++++++++.+|+. +..+..+ ..|||||||||+|||||+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 7889999999886533211 122333456688999999997 4556654 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 854 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 854 DEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+|||+.++..+.+.|++++++ |+|||+++|++.. +.+..|+
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~-~~~~~d~ 495 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHV-VRALCHQ 495 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHH-HHHhcCe
Confidence 9999999999999999999998765 8999999999853 4455666
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-57 Score=549.96 Aligned_cols=187 Identities=20% Similarity=0.335 Sum_probs=152.4
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1247)
+++|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.
T Consensus 268 ~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 345 (501)
T PRK11288 268 LREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPV 345 (501)
T ss_pred cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCC
Confidence 8999999999999999999999999999999999865 3479999999875421 2235689999985 47888
Q ss_pred cCHHHHHHHHhhccC-CCC--CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000867 778 VTVYESLLYSAWLRL-PPE--VDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~-~~~--~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~l 853 (1247)
+|+.|++.+...... +.. ......++.++++++.+++. +..++.++ .|||||||||+||++|+.+|++|+|
T Consensus 346 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lllL 420 (501)
T PRK11288 346 HSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVILL 420 (501)
T ss_pred CCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEEE
Confidence 999999976532111 000 01223345678899999994 66777664 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 854 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 854 DEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+|||..+...+++.|++++++|.|||+++|++. .+.+..|+
T Consensus 421 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~ 465 (501)
T PRK11288 421 DEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADR 465 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCE
Confidence 9999999999999999999999888999999999985 34455566
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-56 Score=542.79 Aligned_cols=188 Identities=17% Similarity=0.273 Sum_probs=148.3
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCCC---CCC
Q 000867 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQNDI---HSP 776 (1247)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~---~~~ 776 (1247)
.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+.. +++
T Consensus 262 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~ 339 (491)
T PRK10982 262 PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYA 339 (491)
T ss_pred cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCccc
Confidence 489999999999999999999999999999999998653 479999999876432 12345899999853 577
Q ss_pred CcCHHHHHHHHhh--ccCCCC-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEE
Q 000867 777 FVTVYESLLYSAW--LRLPPE-VDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIF 852 (1247)
Q Consensus 777 ~ltv~e~l~~~~~--~~~~~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~ 852 (1247)
.+|+.++..+... ...... ......++.++++++.+++. +..++.+ ..||||||||++||++|+.+|+||+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~ill 414 (491)
T PRK10982 340 YLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILM 414 (491)
T ss_pred CCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 8888777432210 000001 12223345678899999995 4456555 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 853 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 853 lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+|||+.++..+++.|+++.++|+|||+++|++.. +.+..|+
T Consensus 415 LDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~-~~~~~d~ 460 (491)
T PRK10982 415 LDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPE-LLGITDR 460 (491)
T ss_pred EcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHH-HHhhCCE
Confidence 999999999999999999999988789999999999853 4456666
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.5e-55 Score=535.09 Aligned_cols=194 Identities=20% Similarity=0.328 Sum_probs=151.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+. ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 478899987763 23599999999999999999999999999999999996431 1379999999764
Q ss_pred Cc----ccccceEEEeccCCCCCCC--cCHHHHHHHHhhc--cCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000867 757 KQ----ETFTRISGYCEQNDIHSPF--VTVYESLLYSAWL--RLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGE 827 (1247)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~--ltv~e~l~~~~~~--~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 827 (1247)
.. ...++.+||++|++.++.. .|+++++.+...- ....... ...+++++++++.+|+.+ ..+..+
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~----- 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF----- 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----
Confidence 22 1234568999998765432 5677766543210 1111111 223456889999999987 666665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEeccCC
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPS 890 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~ 890 (1247)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++++ .|||+++|++.
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~ 463 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE 463 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh
Confidence 4699999999999999999999999999999999999999999999987765 47999999985
No 34
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-53 Score=519.18 Aligned_cols=183 Identities=19% Similarity=0.253 Sum_probs=149.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 589999998763 23599999999999999999999999999999999998653 4799999872
Q ss_pred CcccccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHH
Q 000867 757 KQETFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgG 833 (1247)
+.+||++|+.. +.+.+|++|++.+.. .. . ..+++++++++.+|+. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 45899999864 456799999986421 11 1 1134577899999994 5566655 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++. +.|||+++|++. .+-+..|+
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~ 504 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATR 504 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999876 359999999985 34444555
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-51 Score=508.99 Aligned_cols=186 Identities=22% Similarity=0.311 Sum_probs=149.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 588999988763 24599999999999999999999999999999999998653 479999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000867 757 KQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGq 834 (1247)
..+||++|+. .+++.+||+|++.+....+. .... +...+++++.+|+.+ ..+..+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999996 67788999999987643221 1111 122456899999964 445554 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||++|+.+|++|+|||||+|||+.+...+.+.|+++ .| |||+++|++. .+....|+
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~-tvi~vtHd~~-~~~~~~d~ 511 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF--PG-CAVVISHDRW-FLDRIATH 511 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CC-eEEEEECCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999986 24 8999999985 34445565
No 36
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=5.6e-52 Score=448.80 Aligned_cols=430 Identities=25% Similarity=0.308 Sum_probs=326.0
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCC--CCceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDS--KLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLAF 70 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~--~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~--~~~~~lTv~e~l~f 70 (1247)
+||||.||||||-..+.++|+++. ....+|+|.++|+++-.... ..+|++++|+| .+-|--|+...|.-
T Consensus 39 lAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E 118 (534)
T COG4172 39 LALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAE 118 (534)
T ss_pred EEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHH
Confidence 699999999999999999999875 23468999999998743321 14799999996 34555677777766
Q ss_pred HHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000867 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1247)
..+++.. +...+++..+.++|+..|+++..... +.++..||||||
T Consensus 119 ~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p~~rl--~~yPHeLSGGqR 163 (534)
T COG4172 119 VLRLHRG---------------------------------LSRAAARARALELLELVGIPEPEKRL--DAYPHELSGGQR 163 (534)
T ss_pred HHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCchhhhh--hhCCcccCcchh
Confidence 5554321 01122344567789999998765433 567889999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
|||.||+||+++|++|+-||||++||.....+|++.|+++.++ .+..++.|+|+..-+-+++|+|+||.+|++++.|+.
T Consensus 164 QRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t 242 (534)
T COG4172 164 QRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTT 242 (534)
T ss_pred hHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcH
Confidence 9999999999999999999999999999999999999998765 477888899999999999999999999999999976
Q ss_pred chHHHHHHhCCCCCCCCCChhhHHhhhcCchhhhhhhhccCCCCccCCHHHHHHHHhhchhhhhHHHhhcCCcccCCCCC
Q 000867 231 ELVLDFFESMGFKCPERKGVADFLQEVTSRKDQQQYWVHKEMPYRFVTAQEFSEAFQSFTVGQKLADELRTPFDKCKSHP 310 (1247)
Q Consensus 231 ~~~~~~f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1247)
+.+.. .|. ++
T Consensus 243 ~~lF~--------~Pq--------------------------------------------------------------Hp 252 (534)
T COG4172 243 ETLFA--------APQ--------------------------------------------------------------HP 252 (534)
T ss_pred HHHhh--------CCC--------------------------------------------------------------Ch
Confidence 55421 000 00
Q ss_pred cccccccccccHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccceehHHHHHHHHHH
Q 000867 311 AALTTKMYGVGKKELLKANISRELLLMKRNSFVYIFKLTQLSSMALVSMTLFFRTKMHKDSVSDGGIYVGATFFAVMMTM 390 (1247)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~lf~~~~~~~~~~~~~~~~~g~~f~~i~~~~ 390 (1247)
| . |. +.
T Consensus 253 -------Y-----------T-r~--------------Ll----------------------------------------- 258 (534)
T COG4172 253 -------Y-----------T-RK--------------LL----------------------------------------- 258 (534)
T ss_pred -------H-----------H-HH--------------HH-----------------------------------------
Confidence 0 0 00 00
Q ss_pred HhhHHHHHHHhhcchhhHHhhccCCcchhhHHHHHHHHHhhHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHH
Q 000867 391 FNGMSDISMTIAKLPVFYKQRDLRFYAAWAYALPAWILKIPISFLEVAVWVFLTYYVIGFDPNIGRLFKQFLLLLLVNQM 470 (1247)
Q Consensus 391 ~~~~~~~~~~~~~~~v~~~~r~~~~y~~~~y~la~~l~~~p~~~~~~~~~~~i~Y~l~gl~~~~~~~~~~~l~~~l~~~~ 470 (1247)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccccccCCCccccchhhhhhCHHHHHHHHHHHhhcCCCccccccCCCC
Q 000867 471 ASALFRFIAAAGRNMIVAMSFGSFVLLVLFAFGGFVLSRDDIKKWWVWGYWCSPMMYAQNAIVANEFFGHSWRKFTSNSN 550 (1247)
Q Consensus 471 ~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~gf~i~~~~i~~~~~w~~~~sp~~y~~~al~~~ef~~~~~~~~~~~~~ 550 (1247)
..
T Consensus 259 ---------------------------------------------------------------~a--------------- 260 (534)
T COG4172 259 ---------------------------------------------------------------AA--------------- 260 (534)
T ss_pred ---------------------------------------------------------------hc---------------
Confidence 00
Q ss_pred ccchHHHhhhcCcccCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCcceeecCCcccccCCcCCCCcccccCCCC
Q 000867 551 ETLGVQVLKSRGFFPHAYWYWLGLGATIGFVLLFNIGFTLSLTFLNQFEKPRAVISDESESNDLGNRIGGTAQLSTHGSN 630 (1247)
Q Consensus 551 ~~~g~~~l~~~~~~~~~~~~w~~~~~li~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1247)
++.|
T Consensus 261 eP~g---------------------------------------------------------------------------- 264 (534)
T COG4172 261 EPSG---------------------------------------------------------------------------- 264 (534)
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 0000
Q ss_pred CCCCCCCCcccccccchhhhhhhhccccccccCcCCCCCccCCCCcEEEEEeEEEEEecCchhhhccccccccceeeceE
Q 000867 631 SSHKTCSESEDITVKDSFSQLLSQREVTVGAIQPKKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVS 710 (1247)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs 710 (1247)
...+ ..+..+.-++.+|++..++.+...- +...+...++++||
T Consensus 265 ~~~p-----------------------------------~~~~~~~ll~~~~v~v~f~i~~g~~--~r~~~~~~AVd~is 307 (534)
T COG4172 265 DPPP-----------------------------------LPEDAPVLLEVEDLRVWFPIKGGFL--RRTVDHLRAVDGIS 307 (534)
T ss_pred CCCC-----------------------------------CCCCCCceEEecceEEEEecCCccc--cccchheEEeccce
Confidence 0000 0000123466666666655442211 11123457999999
Q ss_pred EEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc------cccceEEEeccCCC--CCCCcCHHH
Q 000867 711 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFTRISGYCEQNDI--HSPFVTVYE 782 (1247)
Q Consensus 711 ~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~--~~~~ltv~e 782 (1247)
+++++||.+||+|.||||||||-.+|.+.... +|+|.++|.++... ..++.+-.|+||+. +.|.+||.+
T Consensus 308 l~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~q 384 (534)
T COG4172 308 LTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQ 384 (534)
T ss_pred eEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHH
Confidence 99999999999999999999999999997753 49999999987532 34567788999974 678999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 000867 783 SLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 862 (1247)
Q Consensus 783 ~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~ 862 (1247)
-+.=+.....| ..+..++++++.++++++||.+..-. ..+.++|||||||++|||||+.+|++++||||||.||-
T Consensus 385 II~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~----RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~ 459 (534)
T COG4172 385 IIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRN----RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDR 459 (534)
T ss_pred HhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhh----cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhH
Confidence 88766555433 56778899999999999999763221 12457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEeccCC
Q 000867 863 RAAAIVMRTVRNTV-DTGRTVVCTIHQPS 890 (1247)
Q Consensus 863 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~ 890 (1247)
.-+.+|+++|+++. +.|.+-++++||..
T Consensus 460 SVQaQvv~LLr~LQ~k~~LsYLFISHDL~ 488 (534)
T COG4172 460 SVQAQVLDLLRDLQQKHGLSYLFISHDLA 488 (534)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH
Confidence 99999999999986 45899999999974
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.3e-51 Score=505.41 Aligned_cols=186 Identities=20% Similarity=0.283 Sum_probs=149.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECCc--
Confidence 488999987763 24599999999999999999999999999999999998653 4799998541
Q ss_pred CcccccceEEEeccCC-CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHH
Q 000867 757 KQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGq 834 (1247)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+|+.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47788999999987642211 1111 123457899999964 456554 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++. .|||+++|++. .+-...|+
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~ 509 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATH 509 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999872 48999999985 34445565
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.6e-51 Score=504.40 Aligned_cols=183 Identities=23% Similarity=0.249 Sum_probs=152.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ + ..|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 478888887653 1 248999999999999999999999999999999998653 47999885
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
..++|++|+..+.+.+||+|++.+..... .. ...++++++.+++.+..+..++ .|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~~-----~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDDL-----GS---SYYKSEIIKPLQLERLLDKNVK-----DLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCcc-----cCCHHHHH
Confidence 14799999988888899999998642111 11 1246789999999887777654 69999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+.. +....|+
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~-~~~~aDr 523 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYM-IDYISDR 523 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHHhCCE
Confidence 999999999999999999999999999999999999998764 8999999999753 4445566
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.2e-48 Score=488.90 Aligned_cols=186 Identities=23% Similarity=0.328 Sum_probs=148.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|++|++||++||+|||||||||||++|+|..++ .+|+|.+ |.+
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCC-
Confidence 488999988763 24599999999999999999999999999999999998653 4799988 432
Q ss_pred CcccccceEEEeccCC-CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHH
Q 000867 757 KQETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGq 834 (1247)
-.+||++|+. .+++.+||.|++.+.... . .... ....+.++++.+++. +..++.+ +.|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVNG--RPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhccc-c--cccc--hHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 1479999975 578889999999765321 1 1111 123467889999985 4456655 3699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+||++|+.+|++|||||||+|||..+...+.+.|++. +.|||+++|++. .+-...|+
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~ 506 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTE 506 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999875 459999999975 23344554
No 40
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-49 Score=488.08 Aligned_cols=182 Identities=21% Similarity=0.332 Sum_probs=146.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.+.++|+++.++ ++.+|+|+|++|++||++||+|||||||||||++|+|..++ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 588999988763 24599999999999999999999999999999999998653 4799998641
Q ss_pred CcccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHH
Q 000867 757 KQETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgG 833 (1247)
..+||++|+. .+.+..|+.+++.- . .. ...++.+.++++.+++.. ..+..++ .||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~~-----~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEETR-----RFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCchh-----hCCHH
Confidence 2579999974 34456678776531 1 11 112345788999999963 5566653 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+||++|+.+|++|+|||||+|||..+...+.+.|++. . .|||+++|++. .+-...|+
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~ 496 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDD 496 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999986 3 49999999985 34455565
No 41
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.3e-48 Score=460.95 Aligned_cols=197 Identities=25% Similarity=0.291 Sum_probs=149.4
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCcc
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRY 81 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~ 81 (1247)
++|||+|||||||||++|+|...|+ +|+|...+. -.++|++|++...+..||.+.+.-+..- .+
T Consensus 32 iGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~~~v~~~~~~-----~~ 95 (530)
T COG0488 32 IGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVLDYVIEGFGE-----LR 95 (530)
T ss_pred EEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHHHHHHhhhHH-----HH
Confidence 6899999999999999999999987 999988652 3699999999999899999999875421 11
Q ss_pred chhhHhhHHHHhcCCCCCCch---h-HHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 82 DMLTELARREKEAGIKPDPDI---D-VYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
....+...... ..++.+. . ........+.++.+..+..+|..+|++.. ++.+ .+||||||.||+||+
T Consensus 96 ~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~-----~~LSGG~r~Rv~LA~ 166 (530)
T COG0488 96 ELLAELEEAYA---LLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPV-----SSLSGGWRRRVALAR 166 (530)
T ss_pred HHHHHHHHHHH---hcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCch-----hhcCHHHHHHHHHHH
Confidence 11111111110 0111111 1 11122234556667778889999999865 5444 479999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEE-Eec
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV-YQG 228 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~-~~G 228 (1247)
+|..+|++|+|||||++||..+..++-+.|+++ .+ ++++++|++...-+.|++|+-++.|++. |.|
T Consensus 167 aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~G 233 (530)
T COG0488 167 ALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKG 233 (530)
T ss_pred HHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEecCCceeEecC
Confidence 999999999999999999999988888877753 45 6667999999999999999999999874 555
No 42
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-47 Score=439.45 Aligned_cols=188 Identities=20% Similarity=0.358 Sum_probs=155.3
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQN---DIHSPF 777 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~---~~~~~~ 777 (1247)
.++|+||++++||++||-|-=|||+|-|+++|.|..+ ..+|+|.+||.+.... ..+.-++||+.| +-+++.
T Consensus 274 ~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~ 351 (500)
T COG1129 274 KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLD 351 (500)
T ss_pred ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCC
Confidence 5789999999999999999999999999999999654 3479999999986542 234468999987 557788
Q ss_pred cCHHHHHHHHhhccCC-C-CCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000867 778 VTVYESLLYSAWLRLP-P-EVDSETQKMFIEEIMELVELNPL-RQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 854 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~-~-~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lD 854 (1247)
+++.||+.++...+.. . -.+....++.+++..+.|++... .+..+ ..||||.+|||.|||.|..+|+||+||
T Consensus 352 ~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilD 426 (500)
T COG1129 352 MSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILD 426 (500)
T ss_pred CcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEEC
Confidence 9999999887332221 1 24455556678899999998543 22333 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC
Q 000867 855 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 855 EptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
|||.|+|..+..+|.++|++++++|++||+++-+. .|+..+-|+.
T Consensus 427 EPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSEl-pEll~~~DRI 471 (500)
T COG1129 427 EPTRGIDVGAKAEIYRLIRELAAEGKAILMISSEL-PELLGLSDRI 471 (500)
T ss_pred CCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCCh-HHHHhhCCEE
Confidence 99999999999999999999999999999999876 4788888883
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.5e-46 Score=466.02 Aligned_cols=185 Identities=19% Similarity=0.266 Sum_probs=142.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ +++.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.+++
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~--- 570 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSA--- 570 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECC---
Confidence 588999998763 123599999999999999999999999999999999998653 479998865
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGqr 835 (1247)
+..+||++|+. .+.+++.++.........+ ... ++.+.++++.+|+.+ ..+..+ ..||||||
T Consensus 571 -----~~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 571 -----KVRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred -----ceeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 23589999985 2445666654322111111 111 234678999999974 445544 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. + .|||+++|++.. +-...|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~~-i~~~~dr 693 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEHL-ISGSVDE 693 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHHH-HHHhCCE
Confidence 9999999999999999999999999999999998888764 3 499999999853 3344555
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2e-43 Score=396.79 Aligned_cols=205 Identities=20% Similarity=0.324 Sum_probs=164.6
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++...+. ....+++|||++++||++||.|-.|-|-+-|+.+|+|..+. .+|+|.++|.+
T Consensus 256 ~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~ 321 (501)
T COG3845 256 VVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKD 321 (501)
T ss_pred eEEEEeeeEeecCC------------CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEe
Confidence 45778888765321 24589999999999999999999999999999999997653 35999999998
Q ss_pred C----Cccc-ccceEEEeccCCC---CCCCcCHHHHHHHHhhccCC----CCCCHHHHHHHHHHHHHHcCCCcccccccc
Q 000867 756 K----KQET-FTRISGYCEQNDI---HSPFVTVYESLLYSAWLRLP----PEVDSETQKMFIEEIMELVELNPLRQSLVG 823 (1247)
Q Consensus 756 ~----~~~~-~~~~~~~v~q~~~---~~~~ltv~e~l~~~~~~~~~----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g 823 (1247)
. +... .+.-++|||+|-. +.+.+|+.||+.+...-+.| .-.+....++...++++.++.....-..
T Consensus 322 v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~-- 399 (501)
T COG3845 322 VLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA-- 399 (501)
T ss_pred ccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc--
Confidence 6 2222 2345799999853 45789999999776432211 1244566677888999999886332111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..+.||||+.||+-+||+|.++|++|+..+||-|||..+...|.+.|.+.+++|+.|++++-+.. |++++-|+
T Consensus 400 --~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDr 472 (501)
T COG3845 400 --PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDR 472 (501)
T ss_pred --chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhhe
Confidence 13579999999999999999999999999999999999999999999999999999999999875 78999998
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=342.72 Aligned_cols=192 Identities=25% Similarity=0.369 Sum_probs=169.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|++.++. +..+|+|||++|++||+++|+|||||||||||+||.+... +.+|+|.++|.++.
T Consensus 3 i~i~~l~K~fg-------------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSFG-------------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEeC-------------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 67888877653 4679999999999999999999999999999999999876 34899999997653
Q ss_pred c----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 758 Q----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 758 ~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
. ...|+.+|+|+|+..+||.+||.||+..+-..- ...++++.+++..++|+.+||.+.+|.+. ..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2 346778999999999999999999998864321 24456777778899999999999999885 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
|||||+|||||+.+|+++++|||||.|||+...++.+.+++++++|.|.|++||+...
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F 198 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF 198 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH
Confidence 9999999999999999999999999999999999999999999999999999998753
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-41 Score=340.52 Aligned_cols=191 Identities=23% Similarity=0.350 Sum_probs=164.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCC----CcccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE----FVPQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~----~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
.++|+|||||||||||++|.|+.+++ +|+|.++|.++.. ...|+.+|+|+|+..+||.+||.||+..+...-
T Consensus 30 vv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v- 105 (240)
T COG1126 30 VVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV- 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH-
Confidence 37899999999999999999999987 9999999976532 124678999999999999999999999874210
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. ...+++++...++|+.+||.+.+| .++..|||||||||+||
T Consensus 106 --------~~------------------------~~k~eA~~~A~~lL~~VGL~~ka~-----~yP~qLSGGQqQRVAIA 148 (240)
T COG1126 106 --------KK------------------------LSKAEAREKALELLEKVGLADKAD-----AYPAQLSGGQQQRVAIA 148 (240)
T ss_pred --------cC------------------------CCHHHHHHHHHHHHHHcCchhhhh-----hCccccCcHHHHHHHHH
Confidence 00 112334556678999999998765 56778999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|+++++|||||+|||+...++++.++++++. +.|.+.+||.+..+.+.+|||+.|++|++++.|++++..
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f 224 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFF 224 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999864 567777899999999999999999999999999888763
No 47
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=338.60 Aligned_cols=197 Identities=26% Similarity=0.387 Sum_probs=171.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.+.++++++++. ...+|+|+|++|++||+++|+||||||||||||+|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 467888877764 25699999999999999999999999999999999998774 489999999887
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
.. ....+|||+|++.++|.+||+||+.++...+. .+.++++++++++++.+||.+..|.+. .+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 32 34568999999999999999999999876653 345556678999999999999998874 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+|||||+.+|+||+||||++.||+.|+..+++.|.++. +.++||+++||+....++ +-|+
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~-LsdR 200 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVY-LADR 200 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHh-hhCE
Confidence 9999999999999999999999999999999999999976 458999999999975544 6676
No 48
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-39 Score=338.40 Aligned_cols=185 Identities=29% Similarity=0.412 Sum_probs=158.5
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc-------cccceEEEeccCCCCC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-------TFTRISGYCEQNDIHS 775 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~~~v~q~~~~~ 775 (1247)
..+|+++|++|++||+++|+|||||||||||++|.|...+ .+|.+.++|.+.... .+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998764 589999999876431 2345699999999999
Q ss_pred CCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000867 776 PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ-SLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 854 (1247)
Q Consensus 776 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lD 854 (1247)
|++||+||+.....+... +....+++++++++.+||.+..+ ..+ ..|||||||||+|||||+.+|++++.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~p-----~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKKP-----SELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCCc-----hhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22245667889999999987665 443 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 855 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 855 EptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||.+||++++..|++.++++.++ |+|||++||+|. +-+..|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~--lA~~~dr 211 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPE--LAKYADR 211 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHH--HHHhCCE
Confidence 999999999999999999999765 899999999985 4556776
No 49
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-39 Score=340.39 Aligned_cols=200 Identities=27% Similarity=0.455 Sum_probs=170.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ .+ ++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 588999999875 12 59999999999999999999999999999999999765 3589999999887
Q ss_pred CcccccceEEEeccCCC---CCCCcCHHHHHHHHhhccCC--CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 757 KQETFTRISGYCEQNDI---HSPFVTVYESLLYSAWLRLP--PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~---~~~~ltv~e~l~~~~~~~~~--~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
....-+..+|||||... -+| +||+|-+..+..-+.. .... +..++.++++|+.+|+.+.+|..+| .||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LS 141 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELS 141 (254)
T ss_pred cccccCCeEEEcCcccccCCCCC-cCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccC
Confidence 65444568999999643 233 7999999876332221 1122 3336779999999999999999987 599
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||.|||||+++|++|+|||||+|+|+.++..+.++|+++.++|+||++++||++ .+.+.||+
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~ 208 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDR 208 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCE
Confidence 99999999999999999999999999999999999999999999988999999999997 57788998
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-39 Score=332.08 Aligned_cols=194 Identities=25% Similarity=0.372 Sum_probs=170.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.. .||.||||-|+..+||++||.|||..-..++++
T Consensus 29 f~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w 105 (309)
T COG1125 29 FLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGW 105 (309)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCC
Confidence 47899999999999999999999998 999999999987643 468999999999999999999999997776543
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
.+ ++.+.+++++|+.+||+.. ..+++.++.|||||+|||.+||
T Consensus 106 ~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 106 DK----------------------------------ERIKKRADELLDLVGLDPS---EYADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred CH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcCchhcCcchhhHHHHHH
Confidence 21 1233457889999999753 2457889999999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||+.+|+|+++|||+++|||-++.++-+.++++.+.. ++||+.+||+.+|+.+++|||++|++|+++..+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 9999999999999999999999999999999886655 5667779999999999999999999999999999999874
No 51
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1e-38 Score=359.16 Aligned_cols=200 Identities=32% Similarity=0.446 Sum_probs=174.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++..+. .++.+|+||||+|++||++|++||||||||||+|+|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 356677776553 136799999999999999999999999999999999998764 589999999887
Q ss_pred Cc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 757 KQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.+||.+..++.+ ++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHH
Confidence 64 3567789999999999999999999999999886533 445567999999999998665555 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+||+++|+++||||||+|||+.++..+++.|++++++| +||+++||+++ ++.+++|+
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~ 206 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDR 206 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999887 89999999996 56667887
No 52
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.8e-39 Score=315.65 Aligned_cols=190 Identities=27% Similarity=0.363 Sum_probs=167.3
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++|+|++..|. +++++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|.++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 56777765543 33679999999999999999999999999999999999765 34899999999875
Q ss_pred c------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 Q------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
. ...+|.+|+|+||..+.+..||.||+.|..... ..+..+.+++|.++|+.+||.+.++... ..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARALP-----SQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcCc-----cccC
Confidence 3 135788999999999999999999999986654 3445667788999999999999887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccC
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 889 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 889 (1247)
|||+|||+||||++.+|++|+.||||.+||+..+..|++++.++.+.|.||++.||+.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~ 197 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL 197 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH
Confidence 9999999999999999999999999999999999999999999988899999999985
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-39 Score=341.46 Aligned_cols=191 Identities=25% Similarity=0.322 Sum_probs=168.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+.+|+|+||||||||+++|.++..|+ +|+|.++|+++.... .|+.||+++|+..++.+.||.||+.|..++
T Consensus 34 I~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei 110 (339)
T COG1135 34 IFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL 110 (339)
T ss_pred EEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence 46899999999999999999999998 999999998875432 257899999999999999999999998776
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. +.+.+.++.++|+.+||++..+ +++.+|||||||||+
T Consensus 111 ag~~----------------------------------k~ei~~RV~elLelVgL~dk~~-----~yP~qLSGGQKQRVa 151 (339)
T COG1135 111 AGVP----------------------------------KAEIKQRVAELLELVGLSDKAD-----RYPAQLSGGQKQRVA 151 (339)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhc-----cCchhcCcchhhHHH
Confidence 5421 1234456788999999997654 567799999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|+|||+|||||+|||++...|++.|+++.++. +.||++++|.++-+-+.||||.+|++|++++.|+..++.
T Consensus 152 IARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 152 IARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 9999999999999999999999999999999999987754 677888999999999999999999999999999988874
No 54
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=337.90 Aligned_cols=195 Identities=25% Similarity=0.335 Sum_probs=170.1
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
+++++++..+... ..+...+|+|||++|++||++||+|+||||||||++++.+...+ .+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 5678887555321 11235799999999999999999999999999999999998764 4899999997764
Q ss_pred c------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 Q------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
. ...|+.+|+++|+..++...||.||+.|...+.. .++++.+++|.++++.+||.+.++.+. .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 3 3457789999999999999999999999876653 567888899999999999999988875 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCC
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPS 890 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~ 890 (1247)
|||||||+|||||+.+|+||++|||||.|||++...|.+.|+++.++ |.||++++|++.
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~ 203 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME 203 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH
Confidence 99999999999999999999999999999999999999999998655 999999999974
No 55
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.4e-38 Score=352.68 Aligned_cols=179 Identities=22% Similarity=0.261 Sum_probs=134.2
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
+..+.++|+++.++. +..++++++|-|.+++.+|++||||+|||||||++.|...+ ..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--cccccccccc
Confidence 356889999887642 22689999999999999999999999999999999997653 3566643322
Q ss_pred cCCcccccceEEEeccC--CCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 755 PKKQETFTRISGYCEQN--DIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 755 ~~~~~~~~~~~~~v~q~--~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
. ..++..|. +.+.-..++.|+++=.. +. +.+.+.+..++..+||....+... .+.||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~~----~~----~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPKF----PD----EKELEEMRSILGRFGLTGDAQVVP----MSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHhc----cc----cchHHHHHHHHHHhCCCccccccc----hhhccc
Confidence 1 12233333 22333466777664211 11 233455788999999985544432 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
|||+||..|+.++..|.+|+|||||+|||..+...+.+.|.+. ..+||+++||-.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr 567 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR 567 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh
Confidence 9999999999999999999999999999999999999999875 358999999864
No 56
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=336.57 Aligned_cols=193 Identities=27% Similarity=0.453 Sum_probs=165.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCc---cCCCC-cccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGH---GMDEF-VPQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~---~~~~~-~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
++|++|||||||||||++|+|+..|+ +|.|.+||+ |.... ...|+||||+|+..+|+.+||.|||.||.+++.
T Consensus 30 ~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~ 106 (345)
T COG1118 30 LVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRK 106 (345)
T ss_pred EEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccc
Confidence 47999999999999999999999998 999999999 55542 234889999999999999999999999986541
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.+ | +..+.+..+.++|+.+.|+. ++++++.+|||||||||+||
T Consensus 107 --~~-----------------p-------------~~~~~r~rv~elL~lvqL~~-----la~ryP~QLSGGQrQRVALA 149 (345)
T COG1118 107 --ER-----------------P-------------SEAEIRARVEELLRLVQLEG-----LADRYPAQLSGGQRQRVALA 149 (345)
T ss_pred --cC-----------------C-------------ChhhHHHHHHHHHHHhcccc-----hhhcCchhcChHHHHHHHHH
Confidence 00 0 01223445777888888864 45688899999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+..|++||||||+++||++.+.++-.+|++..... +.+.+.++|+..+++++||||++|++|+|...|+++++.
T Consensus 150 RALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 150 RALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999999999999976654 455566899999999999999999999999999999874
No 57
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=329.79 Aligned_cols=177 Identities=25% Similarity=0.363 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||||+|+|+.+|+ +|+|.++|+++. .+.+.++||+|++.++|.+||+||+.++.+..+..
T Consensus 31 fvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~-- 103 (248)
T COG1116 31 FVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKS-- 103 (248)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHHhhheehhhccccc--
Confidence 47999999999999999999999997 999999999873 34568999999999999999999999987754311
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
..+.++.++++|+.+||.... ++.++.|||||||||+|||||+
T Consensus 104 --------------------------------~~e~~~~a~~~L~~VgL~~~~-----~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 104 --------------------------------KAEARERAKELLELVGLAGFE-----DKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred --------------------------------hHhHHHHHHHHHHHcCCcchh-----hcCccccChHHHHHHHHHHHHh
Confidence 112233577899999998765 4678899999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCC
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDA 222 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G 222 (1247)
.+|++|+||||+++||+.|+.++.+.+.++.+.. +.|++.+||+.+|+..++|||++|.++
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999887754 567777999999999999999999984
No 58
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=350.11 Aligned_cols=203 Identities=29% Similarity=0.400 Sum_probs=174.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++++..+ +|.+|+|+|+..++|++||+|||.|+.+.++..
T Consensus 31 f~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~- 106 (338)
T COG3839 31 FVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVP- 106 (338)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCc-
Confidence 36899999999999999999999997 9999999999987654 488999999999999999999999998765421
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
.++.+++++++.+.|+|++.. ++.+.+|||||||||+|||||
T Consensus 107 ---------------------------------k~ei~~rV~eva~~L~l~~lL-----~r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 107 ---------------------------------KAEIDKRVKEVAKLLGLEHLL-----NRKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred ---------------------------------hHHHHHHHHHHHHHcCChhHH-----hcCcccCChhhHHHHHHHHHH
Confidence 122344577889999997655 466778999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHh
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFES 239 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~ 239 (1247)
+.+|+++|||||+|.||+..+.++...++++.+. -++|++.+||+..|+..++|||++|++|++...|++.++.
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~-l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely----- 222 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHER-LGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELY----- 222 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHh-cCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHh-----
Confidence 9999999999999999999999999999987554 4677778999999999999999999999999999999985
Q ss_pred CCCCCCCCCChhhHH
Q 000867 240 MGFKCPERKGVADFL 254 (1247)
Q Consensus 240 ~G~~~~~~~~~~~~~ 254 (1247)
..|.+.-.+.|+
T Consensus 223 ---~~P~n~fVA~Fi 234 (338)
T COG3839 223 ---ERPANLFVAGFI 234 (338)
T ss_pred ---hCccchhhhhhc
Confidence 345544455554
No 59
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-38 Score=321.25 Aligned_cols=198 Identities=27% Similarity=0.384 Sum_probs=174.4
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++|+|++..+. .+.+++|+|++|++||++.++|||||||||+|++|.+...+ .+|+|.+||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 56888876553 45699999999999999999999999999999999998764 4899999999876
Q ss_pred c---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCH
Q 000867 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP--LRQSLVGLPGESGLST 832 (1247)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSg 832 (1247)
. ...||.+|||-|.-.+||++||.||+.+.-.+. ..++++.+++++++++.+||.+ +.+++ +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 357889999999999999999999998765543 4567888889999999999975 56665 468999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+|||.+||||+.+|+||++|||++.||+.++..+++.++++.++ |+|||++|||.. |.+++-|+
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadr 205 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADR 205 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhce
Confidence 9999999999999999999999999999999999999999998755 999999999986 56778888
No 60
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-37 Score=319.13 Aligned_cols=201 Identities=27% Similarity=0.378 Sum_probs=172.8
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..+++++++.+. +.+.|++||+++|++||+++||||||+||||||+.|.|...+ .+|+|.++|.+
T Consensus 7 ~~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~ 71 (263)
T COG1127 7 PLIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGED 71 (263)
T ss_pred ceEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcc
Confidence 468899988765 356799999999999999999999999999999999998774 48999999998
Q ss_pred CCc------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCC
Q 000867 756 KKQ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGES 828 (1247)
Q Consensus 756 ~~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~ 828 (1247)
+.+ ...++++|+++|+.++|..+||+||+.|..+ .....+++..++.+..-++.+||... .+.. +.
T Consensus 72 i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----Ps 144 (263)
T COG1127 72 IPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PS 144 (263)
T ss_pred hhccCHHHHHHHHhheeEEeeccccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----ch
Confidence 643 1346679999999999999999999988643 33345667777788888999999876 5554 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+||||+|||+++|||++.+|+|+|+||||+||||.++..+-++|+++.++ |.|+|++|||.. +++..-|+
T Consensus 145 ELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Dr 215 (263)
T COG1127 145 ELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADR 215 (263)
T ss_pred hhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhce
Confidence 79999999999999999999999999999999999999999999999766 899999999986 46666666
No 61
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=311.89 Aligned_cols=195 Identities=24% Similarity=0.343 Sum_probs=166.4
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC---CCCeEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~---~~~~~~G~i~i~ 752 (1247)
..++.+|+++.+. ++.+|+|||+.|++++++|++|||||||||||++|.... ++-.++|+|.++
T Consensus 6 ~~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 4578889988764 467999999999999999999999999999999999853 334688999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCC
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPG 826 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~ 826 (1247)
|.++-. ...||.+|.|+|.+.-|| +|++||+.|+.++....+ ++.++.|+..|+...|++- +|.+-. .
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~--s 146 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHK--S 146 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhC--C
Confidence 998643 346788999999999999 999999999987654322 6677889999999999864 344422 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
..+|||||+|||||||||+.+|+||+||||||+|||.+...|-+++.+++ +.-|||++||.+.
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq 209 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ 209 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH
Confidence 35799999999999999999999999999999999999999999999987 5689999999874
No 62
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.5e-38 Score=306.73 Aligned_cols=191 Identities=22% Similarity=0.330 Sum_probs=163.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
++||+||||||||||||+|+|...|. +|+|++||++..... .+|-+++++|++.+|..+||.+|+.++.. ++-
T Consensus 27 ~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~---P~L 100 (231)
T COG3840 27 IVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLS---PGL 100 (231)
T ss_pred EEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCC---ccc
Confidence 48999999999999999999999997 999999999986543 35789999999999999999999988632 110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
+ + ..+.++.++.++..+||..+.+ +.+.+|||||||||+|||+|
T Consensus 101 k------L-------------------------~a~~r~~v~~aa~~vGl~~~~~-----RLP~~LSGGqRQRvALARcl 144 (231)
T COG3840 101 K------L-------------------------NAEQREKVEAAAAQVGLAGFLK-----RLPGELSGGQRQRVALARCL 144 (231)
T ss_pred c------c-------------------------CHHHHHHHHHHHHHhChhhHhh-----hCccccCchHHHHHHHHHHH
Confidence 0 0 1123345778899999987654 55678999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+++-+|++||||+|+||+.-+.+....+.+++.+. +.|+++++|+.+++.+++|+++++++|+|.++|+.++..
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 99999999999999999999999999999988764 566777888899999999999999999999999887764
No 63
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-32 Score=364.00 Aligned_cols=202 Identities=23% Similarity=0.349 Sum_probs=171.4
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
...++++|++..++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 926 ~~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~ 992 (2272)
T TIGR01257 926 VPGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGK 992 (2272)
T ss_pred CceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCE
Confidence 347899999887631 135699999999999999999999999999999999998763 4899999998
Q ss_pred cCCc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 755 PKKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 755 ~~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
++.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++.+++++++++.+||.+..+..++ .|||
T Consensus 993 dI~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~~-----~LSG 1064 (2272)
T TIGR01257 993 DIETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEAQ-----DLSG 1064 (2272)
T ss_pred ECcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCH
Confidence 8753 2345679999999999999999999999876652 2233445678899999999988887764 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||+||+||+.+|+|++|||||+|||+.+++.+++.|+++. +|+|||+++|++. ++-.+.|+
T Consensus 1065 GqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDr 1129 (2272)
T TIGR01257 1065 GMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDR 1129 (2272)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999984 6999999999985 34445566
No 64
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-37 Score=333.61 Aligned_cols=202 Identities=27% Similarity=0.400 Sum_probs=169.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++.+|+++.++ ++.+|+|+||++++||+++|+||||||||||||+|+|..++ .+|+|.+||.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCch
Confidence 367899998874 35799999999999999999999999999999999997663 479999999987
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. +.+.|.+|||||.......+||+|-+.++..-.... ....++.++.++++++.+|+.+.+++.+. .|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVD-----ELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCccc-----ccCh
Confidence 54 456778999999998888899999998774321111 11123344578999999999999999874 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+.|||||+++|+||+||||||.||...+.+++++++++. ++|+|||+++||++.. ...-|+
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A-~ryad~ 208 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLA-ARYADH 208 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH-HHhCCE
Confidence 99999999999999999999999999999999999999999998 4599999999999743 233444
No 65
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=344.14 Aligned_cols=199 Identities=28% Similarity=0.403 Sum_probs=176.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++..+. ...+|+|+|++|++||.++|+|||||||||||++|+|... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888887663 1129999999999999999999999999999999999876 4589999999988
Q ss_pred Cc-ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
+. ...+|.+|+|+|+..+||.|||+||+.|+.+.+ ..++++.+++|+++.+.|+|.+..|++. ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 75 345688999999999999999999999998766 3456777889999999999999999885 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |...+.|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladr 203 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADR 203 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCE
Confidence 9999999999999999999999999999999999999998755 899999999984 67778888
No 66
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-37 Score=316.12 Aligned_cols=204 Identities=26% Similarity=0.305 Sum_probs=169.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++..++ +++++|+|||++|++||++||+|||||||||||++|.|..+ +.+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478899887663 35679999999999999999999999999999999999765 4589999999765
Q ss_pred Cc------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000867 757 KQ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1247)
Q Consensus 757 ~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 825 (1247)
.. .++++.+||++|+..+.+.++|.+|+..+..-+.+ .....++.+..+-+.|+.+|+.+.+....+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 43 24577899999999999999999999865322211 112223445567789999999998877764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhcC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
.|||||+|||+|||||+.+|+|++.|||+++||+.+++.+|+.|+++.+ +|.|||++.||... .-+.+|+.
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Ri 218 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRI 218 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhh
Confidence 6999999999999999999999999999999999999999999999874 58999999999864 33566773
No 67
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-37 Score=317.52 Aligned_cols=194 Identities=26% Similarity=0.370 Sum_probs=164.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+|||||||||||++|.|+++|+ +|+|.++|+++.... .++++|+++|+..+|.++||+||+.|..+-
T Consensus 36 i~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre 112 (263)
T COG1127 36 ILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLRE 112 (263)
T ss_pred EEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHh
Confidence 47999999999999999999999998 999999999875432 246899999999999999999999995432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
+. + + ++...++.+..-|+.+||... +++.++.+||||+|||++
T Consensus 113 ~~-----~----l------------------------p~~~i~~lv~~KL~~VGL~~~----~~~~~PsELSGGM~KRva 155 (263)
T COG1127 113 HT-----K----L------------------------PESLIRELVLMKLELVGLRGA----AADLYPSELSGGMRKRVA 155 (263)
T ss_pred hc-----c----C------------------------CHHHHHHHHHHHHHhcCCChh----hhhhCchhhcchHHHHHH
Confidence 11 0 0 111233345556888999753 346778899999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||||++.+|+++++||||+||||.++..+.++++++.+.. +.|++++||+.++++..||++++|.+|+|+..|+++++.
T Consensus 156 LARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 156 LARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999987765 556666999999999999999999999999999999986
Q ss_pred H
Q 000867 235 D 235 (1247)
Q Consensus 235 ~ 235 (1247)
+
T Consensus 235 ~ 235 (263)
T COG1127 235 A 235 (263)
T ss_pred h
Confidence 4
No 68
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=348.75 Aligned_cols=206 Identities=28% Similarity=0.411 Sum_probs=177.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++++|||||||||||++|+|...|+ +|+|.++|+++....+ +|.+++|+|+..+||+|||+|||.|+.+.+...
T Consensus 33 f~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~- 108 (352)
T COG3842 33 FVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKL- 108 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCC-
Confidence 46899999999999999999999998 9999999999987554 588999999999999999999999997643210
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
...+.+.+++++|+.++|++.. ++++..|||||||||+|||||
T Consensus 109 --------------------------------~~~~i~~rv~e~L~lV~L~~~~-----~R~p~qLSGGQqQRVALARAL 151 (352)
T COG3842 109 --------------------------------KKAEIKARVEEALELVGLEGFA-----DRKPHQLSGGQQQRVALARAL 151 (352)
T ss_pred --------------------------------CHHHHHHHHHHHHHHcCchhhh-----hhChhhhChHHHHHHHHHHHh
Confidence 0122345678899999998644 577889999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHHh
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFES 239 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~~ 239 (1247)
+.+|++||||||.|+||..-+.++...++++.+.. +.+.+.+||+-.|+..++|||++|++|++...|+++++-
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY----- 225 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIY----- 225 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHh-----
Confidence 99999999999999999999999999999987765 666777999999999999999999999999999999983
Q ss_pred CCCCCCCCCChhhHHhh
Q 000867 240 MGFKCPERKGVADFLQE 256 (1247)
Q Consensus 240 ~G~~~~~~~~~~~~~~~ 256 (1247)
..|...-.++|+-+
T Consensus 226 ---~~P~~~fVA~FiG~ 239 (352)
T COG3842 226 ---ERPATRFVADFIGE 239 (352)
T ss_pred ---hCcchHHHHHHhCc
Confidence 45665566677653
No 69
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-37 Score=325.58 Aligned_cols=189 Identities=30% Similarity=0.443 Sum_probs=170.3
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc---cCCc-ccccceEEEeccCCCCCCC
Q 000867 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFTRISGYCEQNDIHSPF 777 (1247)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~~~v~q~~~~~~~ 777 (1247)
...+++|||++|+.||++|++|||||||||||++|+|...+ ..|.|.+||. +.+. ....|.+|||+|+..+|+.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 45689999999999999999999999999999999998774 4899999999 5544 3446789999999999999
Q ss_pred cCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000867 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEpt 857 (1247)
|||.||+.|+.+++ ...++..+.+.+++++|+.+.|++..+.+. ..|||||||||++||||+..|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998777 344566777889999999999999988874 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 858 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++||..-+..+.+-|+++.++ |.|++++|||+. +.++++|+
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladr 207 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADR 207 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcce
Confidence 999999999999999998755 999999999985 78999998
No 70
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2e-37 Score=331.90 Aligned_cols=195 Identities=31% Similarity=0.434 Sum_probs=164.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.+|||||.+...+.+||+|-+.+|..=+.
T Consensus 30 i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~- 105 (258)
T COG1120 30 ITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHL- 105 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCccc-
Confidence 48999999999999999999999987 9999999999876543 3789999999888889999999998742100
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
..+. . ..++.++.+++.|+.+|+.+.++. .+..|||||||||.|||
T Consensus 106 -~~~~---~-------------------------~~~~D~~~v~~aL~~~~~~~la~r-----~~~~LSGGerQrv~iAr 151 (258)
T COG1120 106 -GLFG---R-------------------------PSKEDEEIVEEALELLGLEHLADR-----PVDELSGGERQRVLIAR 151 (258)
T ss_pred -cccc---C-------------------------CCHhHHHHHHHHHHHhCcHHHhcC-----cccccChhHHHHHHHHH
Confidence 0000 0 011223357788999999877764 45579999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||+++|+|++||||||+||...+.++++.++++.++ ++.+++++.|+.+.+..+||++++|++|+++.+|++++++
T Consensus 152 ALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 152 ALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999999999865 4667777999999999999999999999999999988765
No 71
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=306.31 Aligned_cols=185 Identities=30% Similarity=0.364 Sum_probs=167.6
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC--cccccceEEEeccCCCCCCCcCHH
Q 000867 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK--QETFTRISGYCEQNDIHSPFVTVY 781 (1247)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~~~v~q~~~~~~~ltv~ 781 (1247)
++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|++||.+.. +...++.+|.++.+--++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 489999999999999999999999999999999998764 4899999999864 345678899999888899999999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000867 782 ESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 861 (1247)
Q Consensus 782 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD 861 (1247)
|||.|.+.+. +....+.+++++++.+.|+|.++.|+.+| ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999998875 45566778889999999999999999987 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 862 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 862 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..+.+.+.+.++++.++|++||+++|..+ ++-.+.|+
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDr 202 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDR 202 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhhe
Confidence 99999999999999888999999999874 56667777
No 72
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.3e-37 Score=343.38 Aligned_cols=195 Identities=32% Similarity=0.448 Sum_probs=169.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCC--CcccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE--FVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~--~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++++||||||||||+|+|+|++.|+ +|+|.++|.+... ...++.+||++|++.+++.+||+||+.|.+.+++..
T Consensus 33 i~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~ 109 (293)
T COG1131 33 IFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLS 109 (293)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCC
Confidence 47999999999999999999999997 9999999988754 344678999999999999999999999998876431
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
. ...+..++++++.+||++.. ++.+++||+|||||++||+|
T Consensus 110 ~----------------------------------~~~~~~~~~~l~~~~L~~~~-----~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 110 K----------------------------------EEAEERIEELLELFGLEDKA-----NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred h----------------------------------hHHHHHHHHHHHHcCCchhh-----CcchhhcCHHHHHHHHHHHH
Confidence 1 01223467899999998733 34566899999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFFE 238 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f~ 238 (1247)
|+++|+++||||||+|||+.++.++++.|+++++. ++++|++++|..+++..+||+|++|++|++++.|+.+++...+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFG 229 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhc
Confidence 99999999999999999999999999999998764 44677778999999999999999999999999999988776544
No 73
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-37 Score=307.90 Aligned_cols=207 Identities=23% Similarity=0.363 Sum_probs=159.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+||++|||||||||||+++....+ |..+++|+|.++|+++.+. ..|+.+|+|+|.|.-|| +|++||+.|+.+
T Consensus 35 VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r 113 (253)
T COG1117 35 VTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLR 113 (253)
T ss_pred eEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHH
Confidence 589999999999999999988755 4567899999999988543 34689999999999888 899999999998
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
+++..+ + ++ +..++.+.. ...+.|++-++| ++...+||||||||+
T Consensus 114 ~~g~~~--~---~l---------------deiVe~sLk----~AaLWdEVKDrL-----------~~sa~~LSGGQQQRL 158 (253)
T COG1117 114 LHGIKD--K---EL---------------DEIVESSLK----KAALWDEVKDRL-----------HKSALGLSGGQQQRL 158 (253)
T ss_pred hhccch--H---HH---------------HHHHHHHHH----HhHhHHHhHHHh-----------hCCccCCChhHHHHH
Confidence 876421 1 11 001110000 001122222222 233457999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+-+|+|||||||||+|||.+..+|-+++.++.+ .-||+++||.+.++.+..|+..++..|++++.|+++++
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 999999999999999999999999999999999998753 45677799999999999999999999999999999887
Q ss_pred HHHHHhCCCCCCCCCChhhHH
Q 000867 234 LDFFESMGFKCPERKGVADFL 254 (1247)
Q Consensus 234 ~~~f~~~G~~~~~~~~~~~~~ 254 (1247)
. ..|.++...||+
T Consensus 236 F--------~~P~~~~TedYi 248 (253)
T COG1117 236 F--------TNPKHKRTEDYI 248 (253)
T ss_pred h--------cCccHHHHHHHh
Confidence 4 345554444443
No 74
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=338.27 Aligned_cols=201 Identities=27% Similarity=0.390 Sum_probs=177.2
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++.++. +..+++|+|++|++||.++++|||||||||||++|+|...+ .+|+|.++|.+
T Consensus 4 ~~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~ 68 (352)
T COG3842 4 PALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGED 68 (352)
T ss_pred ceEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEE
Confidence 4688999887653 45799999999999999999999999999999999998764 48999999999
Q ss_pred CCcc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 756 KKQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 756 ~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
+... ..+|.+|+|+|+-++||+|||.||+.|+.+++ .....++.+++|+++++.++|.+..+... .+|||||
T Consensus 69 i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQ 141 (352)
T COG3842 69 ITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQ 141 (352)
T ss_pred CCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHH
Confidence 8653 45788999999999999999999999997633 23455667789999999999999988875 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|||++||||+.+|++|+||||.|.||..-+.+++..++++.++ |.|.|++|||.. |-+.+-|+
T Consensus 142 qQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDr 206 (352)
T COG3842 142 QQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDR 206 (352)
T ss_pred HHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccc
Confidence 99999999999999999999999999999999999999998654 999999999985 56667787
No 75
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-36 Score=322.10 Aligned_cols=193 Identities=26% Similarity=0.392 Sum_probs=159.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEecccc--ccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHD--VHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..||||||.. .+-...||+|.+..+...+.
T Consensus 32 ~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~-- 106 (254)
T COG1121 32 ITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKK-- 106 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccc--
Confidence 58999999999999999999999987 999999998877655567899999953 23344699999998632211
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..++ ... .+.++.+++.|+.+|+.+..|..+| .|||||+|||.||||
T Consensus 107 g~~~---~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGGQ~QRV~lARA 153 (254)
T COG1121 107 GWFR---RLN-------------------------KKDKEKVDEALERVGMEDLRDRQIG-----ELSGGQKQRVLLARA 153 (254)
T ss_pred cccc---ccc-------------------------HHHHHHHHHHHHHcCchhhhCCccc-----ccCcHHHHHHHHHHH
Confidence 0011 010 1123457889999999988877766 599999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|+++|++|+|||||+|+|+.++..+.+.|+++.++ +++|+++||+...+.++||+|+.|+ +++.+.|++++..
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 99999999999999999999999999999998654 6778889999999999999999995 4789999998865
No 76
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-37 Score=303.17 Aligned_cols=191 Identities=30% Similarity=0.332 Sum_probs=167.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCC--CCcccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMD--EFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~--~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+|||||||||+|++|++++.|+ +|.|+++|.+.. +...++.+|.++-+..++..||++|||.|.+++.+..
T Consensus 30 i~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~ 106 (245)
T COG4555 30 ITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGLS 106 (245)
T ss_pred EEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhhh
Confidence 48999999999999999999999998 999999998863 3345788999998889999999999999998875432
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+.+..++++.+.|+|.++.|+++| ++|-|+||||+||||
T Consensus 107 ----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARA 147 (245)
T COG4555 107 ----------------------------------RKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARA 147 (245)
T ss_pred ----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHH
Confidence 12234457788999999999998877 599999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|++++|||||||||..+...+.+.+++... .+.+|+..+|.++++..+||+|++|++|++++.|+.+.+..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 9999999999999999999999999999988633 36677778999999999999999999999999999887754
No 77
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.5e-35 Score=337.36 Aligned_cols=200 Identities=28% Similarity=0.415 Sum_probs=172.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEe
Confidence 3588999988763 24699999999999999999999999999999999998763 47999999998
Q ss_pred CCc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 756 KKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 756 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
... ...++.+||++|++.+++.+||+||+.|.+.++. .+..+.+++++++++.++|.+..++.++ +||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKVG-----ELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCchh-----hCCHH
Confidence 653 2345779999999999999999999998765532 2334445567899999999988888764 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+..|+
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~ 207 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDR 207 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999777999999999986 55566676
No 78
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-36 Score=315.84 Aligned_cols=181 Identities=26% Similarity=0.374 Sum_probs=151.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..+++++||+|||.+.+.
T Consensus 33 ~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~ 109 (226)
T COG1136 33 FVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLL 109 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHH
Confidence 48999999999999999999999997 9999999988764321 3679999999999999999999998765
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
+.+...+ +.+...+.+++.+||.+..+ ++++..|||||||||
T Consensus 110 ~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~----~~~p~eLSGGqqQRV 151 (226)
T COG1136 110 IAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL----KKKPSELSGGQQQRV 151 (226)
T ss_pred HcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----cCCchhcCHHHHHHH
Confidence 5432100 11234567889999986544 245668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcE
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v 224 (1247)
+|||||+.+|++++.||||.+||+.++..|++.++++.+. .+++++++||+. ++...|||++.|.+|++
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~-~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP-ELAKYADRVIELKDGKI 220 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH-HHHHhCCEEEEEeCCee
Confidence 9999999999999999999999999999999999998765 456666688876 67779999999999983
No 79
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.1e-35 Score=321.46 Aligned_cols=200 Identities=23% Similarity=0.314 Sum_probs=165.8
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 568888877631 113599999999999999999999999999999999998653 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. .+++.++|++|++.+++.+||+||+.+....+ ....+..+++++++++.+|+.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 23467899999999999999999998875432 1223344566889999999988777665 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+.+..|+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~ 207 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHR 207 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998777899999999985 34445565
No 80
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-36 Score=305.88 Aligned_cols=200 Identities=24% Similarity=0.326 Sum_probs=163.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
|++|+|||||||||||++|.|+.+|+ +|+|.+||.++.... .++.+||++|+..+.+.+||.+|++.+..-
T Consensus 32 ~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~ 108 (258)
T COG3638 32 MVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLG 108 (258)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcc
Confidence 58999999999999999999999987 999999998765432 357899999999999999999999987532
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
+. ..+.. -..+. .++.+..+-+.|+++|+.+.+.++.+ +|||||+|||+
T Consensus 109 ~~-----s~~~s------lfglf---------------sk~dk~~Al~aLervgi~~~A~qra~-----~LSGGQQQRVa 157 (258)
T COG3638 109 YT-----STWRS------LFGLF---------------SKEDKAQALDALERVGILDKAYQRAS-----TLSGGQQQRVA 157 (258)
T ss_pred cc-----hHHHH------HhCCC---------------CHHHHHHHHHHHHHcCcHHHHHHHhc-----cCCcchhHHHH
Confidence 11 01100 11111 11223345567999999887766544 69999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+++|+|+|-|||+++|||.+++++++.|++.++.. +.|+++..|..+-+.++||||+-|++|+++|.||++++.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~-g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQED-GITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 9999999999999999999999999999999999998765 455555788899999999999999999999999998865
Q ss_pred H
Q 000867 235 D 235 (1247)
Q Consensus 235 ~ 235 (1247)
+
T Consensus 237 ~ 237 (258)
T COG3638 237 D 237 (258)
T ss_pred H
Confidence 4
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.6e-35 Score=333.98 Aligned_cols=202 Identities=24% Similarity=0.301 Sum_probs=170.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 6788998776411 0124699999999999999999999999999999999998763 4899999999865
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. ..++.+||++|+..+++.+||+||+.+....+ ..+.++.++++.++++.+||.+..|... +.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999998875432 2334555667899999999998888765 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||+|||||+++|++|+||||||+||+.++..+++.|+++.++ |.|||+++|+++ .+.+..|+
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~ 210 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDC 210 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998765 899999999975 45566777
No 82
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=338.32 Aligned_cols=200 Identities=26% Similarity=0.356 Sum_probs=172.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 377889887762 124599999999999999999999999999999999998763 589999999886
Q ss_pred Ccc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
... ..++.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.+||.+..+..+ +.||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 432 23467999999999999999999999986533 2344555677899999999998888775 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.++.|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~ 204 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADR 204 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999985 57777887
No 83
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-35 Score=322.58 Aligned_cols=198 Identities=26% Similarity=0.364 Sum_probs=165.2
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5678877663 23599999999999999999999999999999999998653 47999999987643
Q ss_pred ------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 759 ------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 759 ------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
..+++.++|++|++.+++.+||+||+.+...... ..+.+..+++++++++.+|+.+..++.+ +.|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 1245678999999999999999999988643221 1233444567888999999987776665 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~ 206 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADR 206 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999999998764 899999999986 45556676
No 84
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.8e-35 Score=336.11 Aligned_cols=199 Identities=26% Similarity=0.372 Sum_probs=173.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.+||.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478999988763 2458999999999999999999999999999999999876 3489999999886
Q ss_pred Cc-ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
.. ...+|.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.+||.+..+... +.||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999986543 2344556678999999999999888765 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+.+|++++|||||++||..++..+.+.|+++.++ |.|+|++||++. ++..+.|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~ 204 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADR 204 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999996 67788887
No 85
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.76 Aligned_cols=199 Identities=25% Similarity=0.368 Sum_probs=172.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 588999988763 24589999999999999999999999999999999998763 489999999886
Q ss_pred Ccc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
... ..+|.+|||+|+..++|.+||+||+.|....+ ..+.++.+++++++++.+||.+..+... +.||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 532 23567999999999999999999999986543 2344556678899999999998887765 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |+|+|++||++. ++..+.|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~ 206 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDT 206 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999995 56777787
No 86
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.5e-36 Score=298.44 Aligned_cols=191 Identities=27% Similarity=0.357 Sum_probs=166.6
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccc----cceEEEeccCCCCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETF----TRISGYCEQNDIHSP 776 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~----~~~~~~v~q~~~~~~ 776 (1247)
++++++++||+.+++||++|++|||||||||.+.++.|...+ .+|.|.+||.+++.... +.-+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 456799999999999999999999999999999999998764 37999999999875432 224799999999999
Q ss_pred CcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000867 777 FVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1247)
Q Consensus 777 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEp 856 (1247)
.+||+||+.-....+.. +...++++.+++++++.+++.|+++.... .||||||||+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999877665532 23334566678899999999999998753 6999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC
Q 000867 857 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
++|+||.+..+|+++++.+...|.-|++|-|.-+ |..+..|++
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRa 209 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRA 209 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheE
Confidence 9999999999999999999988999999999886 567778884
No 87
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.3e-35 Score=317.01 Aligned_cols=200 Identities=29% Similarity=0.404 Sum_probs=163.8
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++.. ...+.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehhh
Confidence 577887766310 0014699999999999999999999999999999999998653 47999999987643
Q ss_pred cc-------ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 759 ET-------FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 759 ~~-------~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 24568999999999999999999988754431 223334556889999999987776665 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++.. + +..|+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~ 209 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADR 209 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcE
Confidence 9999999999999999999999999999999999999999999876 58999999999864 3 35565
No 88
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=315.24 Aligned_cols=197 Identities=28% Similarity=0.390 Sum_probs=163.0
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777653 2459999999999999999999999999999999999865 347999999987643
Q ss_pred c-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
. ..++.++|++|++.+++.+|++|++.+..... ....+..+++++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23456899999998888999999998765332 1223344556788999999988777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+..|+
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 200 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADR 200 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999876 4899999999985 34455565
No 89
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.1e-34 Score=330.75 Aligned_cols=200 Identities=27% Similarity=0.374 Sum_probs=171.5
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++..++ ++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 4689999998763 24699999999999999999999999999999999998763 48999999998
Q ss_pred CCc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 756 KKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 756 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
... ...++.+||++|+..+++.+||+|++.+.+..+. .+..+.+++++++++.++|.+..++.++ .||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHH
Confidence 653 2345679999999999999999999987665432 2233344567889999999988888764 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++||+||+++|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+.+ ++-+..|+
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~ 241 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDR 241 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998777999999999985 56666777
No 90
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.3e-34 Score=334.35 Aligned_cols=199 Identities=24% Similarity=0.350 Sum_probs=172.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEE--EEEEEcCc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 754 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~--G~i~i~g~ 754 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 578999988763 23599999999999999999999999999999999998764 36 99999998
Q ss_pred cCCcc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 755 PKKQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 755 ~~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
+.... ..++.+|||+|+..++|.+||+||+.|....+ ..+.++.+++++++++.+||.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 76432 23567999999999999999999999986543 2344555667899999999999888875 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..+.|+
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dr 208 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADK 208 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998766 799999999986 46677777
No 91
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=313.13 Aligned_cols=196 Identities=26% Similarity=0.401 Sum_probs=163.8
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchhH
Confidence 5677777653 23599999999999999999999999999999999998653 48999999987653
Q ss_pred ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000867 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1247)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~ 838 (1247)
..++.++|++|+..+++.+|++||+.+....+. ......++.++++++.+|+.+..++.+ +.||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345678999999999999999999987654431 223334556889999999987776654 46999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 839 ~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 197 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDR 197 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhE
Confidence 9999999999999999999999999999999999998777899999999986 34445565
No 92
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=314.16 Aligned_cols=199 Identities=27% Similarity=0.382 Sum_probs=163.6
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc
Confidence 567777765310 0114699999999999999999999999999999999998653 47999999987653
Q ss_pred ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000867 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1247)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~ 838 (1247)
.++.++|++|++.+++.+|++||+.+....+. ...+..++.++++++.+|+.+..+..+ +.||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35678999999998888999999988654331 223344566889999999987776665 46999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 839 ~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADR 201 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999864 4899999999986 34455565
No 93
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2e-34 Score=313.41 Aligned_cols=199 Identities=26% Similarity=0.332 Sum_probs=164.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 56788887652 123599999999999999999999999999999999998653 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. .+++.++|++|++.+++.+|++||+.+....+ ....+..+++++++++.+++.+..++.+ +.||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVR---GKKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 23567899999999999999999998875432 1223344566889999999987666654 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 206 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHR 206 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999999998777899999999985 44445565
No 94
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.9e-34 Score=314.56 Aligned_cols=208 Identities=37% Similarity=0.604 Sum_probs=170.1
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-CeEEEEEEEcCccC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 756 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~-~~~~G~i~i~g~~~ 756 (1247)
+.|+|+++.+... +..+.+|+|+|+++++||+++|+||||||||||+++|+|..+. .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4578888776311 0135799999999999999999999999999999999997641 13589999999887
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHH-HHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEE-IMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
.....++.++|++|++.+++.+||+||+.+......+.....+...+.+++ .++.+++.+..++.+ +.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 544556779999999999999999999998765433222122222334555 889999887766654 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||++|||+|+.+|++++|||||+|||+.++..+.+.++++.++|+|+|+++|++..++.+.+|+
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~ 213 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDR 213 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCE
Confidence 9999999999999999999999999999999999999998777899999999998788888887
No 95
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.7e-35 Score=284.57 Aligned_cols=181 Identities=28% Similarity=0.355 Sum_probs=153.7
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCcCHHHHHHH
Q 000867 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFTRISGYCEQNDIHSPFVTVYESLLY 786 (1247)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~ 786 (1247)
..+..|++||++||+||||||||||||.++|...+ .+|+|.|||.+.... ...|-++.++|+..+|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 56788999999999999999999999999998764 489999999987542 345668899999999999999999977
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 000867 787 SAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 866 (1247)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~ 866 (1247)
+..-.+ .. .++.+++++.++..+||..+.+.+.+ .|||||||||++||+|+++-+|++||||+|.||+.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643211 11 24456679999999999999888754 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 867 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 867 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++..++.++++ ++.|++++||+|+ +.-..-|+
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~ 199 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADR 199 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhc
Confidence 99999999874 4899999999996 34444444
No 96
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-34 Score=330.48 Aligned_cols=187 Identities=28% Similarity=0.396 Sum_probs=161.3
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCcC
Q 000867 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFTRISGYCEQNDIHSPFVT 779 (1247)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 779 (1247)
++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 35699999999999999999999999999999999998663 48999999987643 233567899999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000867 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1247)
Q Consensus 780 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsg 859 (1247)
|+|++.+.+.++. .+....+++++++++.+||.+..++.++ .||||||||++||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765442 2333445568899999999888877764 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+.++..+++.|+++.++|+|||+++|++. ++.+..|+
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~ 193 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDR 193 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 9999999999999998877999999999985 55566676
No 97
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=313.58 Aligned_cols=197 Identities=28% Similarity=0.367 Sum_probs=164.2
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCc
Confidence 5778877653 24599999999999999999999999999999999998653 48999999987542
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
...++.++|++|++.+++.+||+|++.+....+. ...++.+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2234578999999999999999999988654431 223334556889999999988777765 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++||+||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~ 201 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDR 201 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998776 899999999986 34445565
No 98
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.6e-34 Score=311.62 Aligned_cols=198 Identities=26% Similarity=0.352 Sum_probs=163.6
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEccc
Confidence 4677777653 124599999999999999999999999999999999998653 47999999987643
Q ss_pred c------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 759 E------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 759 ~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
. ..++.++|++|++.+++.+|++||+.+....+. ...+..+++++++++.+|+.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 235678999999999999999999988754331 223444556889999999987766664 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~ 205 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHR 205 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998777899999999985 33344554
No 99
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.3e-34 Score=332.22 Aligned_cols=199 Identities=23% Similarity=0.332 Sum_probs=172.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 588999988763 24599999999999999999999999999999999998763 489999999886
Q ss_pred Ccc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
... ..+|.+||++|+..++|.+||.||+.|+...+ ..+..+.+++++++++.+||.+..+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 432 23567999999999999999999999976433 2234455667899999999998888775 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..+.|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDr 214 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDR 214 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999985 57777887
No 100
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.2e-33 Score=342.55 Aligned_cols=202 Identities=30% Similarity=0.452 Sum_probs=164.8
Q ss_pred cCCCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEE
Q 000867 671 LPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT 750 (1247)
Q Consensus 671 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~ 750 (1247)
.|.-.+.++++|++|.+... +..+|+|+|++|+|||.+||+|+||||||||+|+|.|... +.+|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 34456789999999998632 2369999999999999999999999999999999999876 3589999
Q ss_pred EcCccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-------ccccc
Q 000867 751 ISGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-------PLRQS 820 (1247)
Q Consensus 751 i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~ 820 (1247)
+||.|.+. ..+|+.+|||+||+.++. -|++||+.++. | +.+.++ +.++++..|.. .-.|+
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EATDEE----IIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCCHHH----HHHHHHHhCcHHHHHhccccccc
Confidence 99998654 567899999999998875 69999998652 2 223222 33444444433 23466
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 821 ~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+|. ++.+||||||||++|||||+++|+||+||||||+||+++.+.|.+.|++.. +|+|+|+++|+++ .+...|+
T Consensus 602 ~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adr 676 (709)
T COG2274 602 PVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADR 676 (709)
T ss_pred cccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccE
Confidence 6664 446899999999999999999999999999999999999999999999875 5799999999986 5666776
No 101
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.2e-34 Score=311.58 Aligned_cols=197 Identities=26% Similarity=0.391 Sum_probs=163.5
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCc
Confidence 5678877653 23599999999999999999999999999999999998653 47999999987643
Q ss_pred c-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
. ..++.++|++|++.+++..|++||+.+....+ ....++.+++++++++.+|+.+..+..+ +.||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 2 22356899999998888999999998765432 1223444556888999999987777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~ 200 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADR 200 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 99999999999999999999999999999999999998764 899999999985 44455565
No 102
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=330.39 Aligned_cols=201 Identities=25% Similarity=0.389 Sum_probs=170.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67888887763 24599999999999999999999999999999999998663 4799999998864
Q ss_pred cc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 QE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
.. ..++.+||++|+..++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987643211 12344555667899999999988887765 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++..+.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dr 206 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADR 206 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999985 56667777
No 103
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.8e-34 Score=313.26 Aligned_cols=202 Identities=28% Similarity=0.403 Sum_probs=166.7
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 5678888776311 0112599999999999999999999999999999999998653 4799999998764
Q ss_pred c--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
. ..+++.++|++|++.+++.+||+||+.+....+ ....++.+++++++++.+|+.+..+..+ +.||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999999999999999998765433 1233444567889999999988777665 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 205 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDR 205 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999998777899999999985 45555665
No 104
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.9e-34 Score=326.47 Aligned_cols=199 Identities=27% Similarity=0.374 Sum_probs=167.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478899988763 24599999999999999999999999999999999998653 479999999876
Q ss_pred Cc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 757 KQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
.. ...++.+||++|++.+++.+||+|++.+.+... ..+.+..+++++++++.++|.+..++.++ .|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRVA-----LLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCchh-----hCCHHH
Confidence 42 223567999999999999999999998755432 12233344567889999999887777764 699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~ 204 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDR 204 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998777999999999986 55566676
No 105
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=330.48 Aligned_cols=200 Identities=24% Similarity=0.348 Sum_probs=172.2
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+
T Consensus 18 ~~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~ 82 (377)
T PRK11607 18 PLLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVD 82 (377)
T ss_pred ceEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEE
Confidence 3588999987763 23599999999999999999999999999999999998763 48999999987
Q ss_pred CCc-ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 756 KKQ-ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 756 ~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
+.. ...+|.+||++|+..++|.+||.||+.|....+ ..+..+.+++++++++.++|.+..+..+ .+|||||
T Consensus 83 i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq 154 (377)
T PRK11607 83 LSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQ 154 (377)
T ss_pred CCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHH
Confidence 643 234678999999999999999999999876533 2234555667899999999998877765 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+|||||+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++||++. ++..+-|+
T Consensus 155 ~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDr 219 (377)
T PRK11607 155 RQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGR 219 (377)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 4899999999986 67777887
No 106
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.4e-34 Score=315.76 Aligned_cols=200 Identities=27% Similarity=0.355 Sum_probs=164.1
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCC
Confidence 4677776653 23599999999999999999999999999999999998653 47999999987653
Q ss_pred c---c-ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCC-------CCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 759 E---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 759 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
. . .++.++|++|++.+++.+||+|++.+....+.... ......++.++++++.+|+.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 2 1 23458999999999999999999988654321110 112334556889999999987776665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+..|+
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~ 212 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADR 212 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998777899999999986 45566676
No 107
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.3e-34 Score=314.95 Aligned_cols=197 Identities=27% Similarity=0.364 Sum_probs=163.9
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 5677777653 23599999999999999999999999999999999998653 47999999987543
Q ss_pred c---c-ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 759 E---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 759 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
. . .++.++|++|++.+++.+|++||+.+....+. ...+..++.++++++.+++.+..++.+ +.|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23468999999999999999999987643321 223344456788999999987776665 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 202 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDR 202 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998777899999999986 56666666
No 108
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=331.94 Aligned_cols=199 Identities=25% Similarity=0.364 Sum_probs=169.8
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378889987763 24599999999999999999999999999999999998763 479999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 757 KQE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 757 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
... ..++.+||++|+..+++.+||+||+.|....+ ..+.++.+++++++++.+||.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 431 23467899999999999999999999876433 1233445567899999999988777765 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|+++|++. ++.++.|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~ 203 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADK 203 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998764 899999999986 56677787
No 109
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=309.41 Aligned_cols=200 Identities=24% Similarity=0.339 Sum_probs=171.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-+.++|++|+++. +..+|+|+|+++++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 3678899988741 25799999999999999999999999999999999998763 479999999986
Q ss_pred C----cccccceEEEeccCCCCC-CCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 757 K----QETFTRISGYCEQNDIHS-PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 757 ~----~~~~~~~~~~v~q~~~~~-~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
. ...+++.+|||+|++..+ -.-||.|.+.|+.. +...+.++.+++++++++.+|+.+..+... ..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~---n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLE---NLGLPREEIEERVAEALELVGLEELLDRPP-----FNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchh---hcCCCHHHHHHHHHHHHHHcCchhhccCCc-----cccC
Confidence 5 345678899999998665 35799999999864 234556678889999999999999887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||+||.+|+.+|++|+|||||||||+.....+++.++++.++ |+|+|+++|+.. .+.+..|+
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~ 208 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADR 208 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCE
Confidence 99999999999999999999999999999999999999999999877 689999999975 35555565
No 110
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=334.30 Aligned_cols=191 Identities=26% Similarity=0.339 Sum_probs=162.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.++||+|++.+++++||+|||.|+.+.++..
T Consensus 32 ~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (356)
T PRK11650 32 FIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMP- 107 (356)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999987 999999999876433 3478999999999999999999999976432100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+.+..++++++.+||.+..+ +.+++|||||||||+|||||
T Consensus 108 ---------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 108 ---------------------------------KAEIEERVAEAARILELEPLLD-----RKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhHhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0112234677899999976544 55668999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++||||||+||+.++.++.+.++++.+. .+++++.++|+..++..++|+|++|++|+++..|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 9999999999999999999999999999987653 3566777899999999999999999999999999988764
No 111
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-34 Score=312.54 Aligned_cols=196 Identities=26% Similarity=0.353 Sum_probs=162.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 47899998876311 011469999999999999999999999999999999999865 3489999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000867 757 KQET------F-TRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1247)
Q Consensus 757 ~~~~------~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 829 (1247)
.... . ++.++|++|++.+++.+|++||+.+....+ ....+..+++++++++.+||.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4321 1 256899999998899999999998865432 1223344567889999999987766654 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCCh
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSI 891 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~ 891 (1247)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ +|+|||+++|++..
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~ 208 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL 208 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 999999999999999999999999999999999999999999999865 58999999999864
No 112
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=329.41 Aligned_cols=202 Identities=23% Similarity=0.300 Sum_probs=168.7
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|++++++.. ..++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5788988876410 0124699999999999999999999999999999999998763 4899999998865
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. ..++.+||++|++.+++.+||+||+.+....+ ..+.++.+++++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13467999999999999999999998875433 1233444567889999999988777665 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~ 210 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDR 210 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998764 899999999986 45566777
No 113
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.1e-34 Score=328.93 Aligned_cols=187 Identities=24% Similarity=0.265 Sum_probs=162.4
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc---cc----cceEEEeccCCCC
Q 000867 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---TF----TRISGYCEQNDIH 774 (1247)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~~~v~q~~~~ 774 (1247)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.++... .. ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 45699999999999999999999999999999999998763 589999999887532 22 5679999999999
Q ss_pred CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000867 775 SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 854 (1247)
Q Consensus 775 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lD 854 (1247)
+|.+||+||+.|..... ..+.++.++++.++++.+||.+..++.. ..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 2344556678899999999988877765 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 855 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 855 EptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+.++..+++.++++.++ |+|||++||++.. +....|+
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~e-a~~~~dr 199 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDE-AIRIGDR 199 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhCCE
Confidence 999999999999999999998654 8999999999863 5666777
No 114
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-34 Score=298.57 Aligned_cols=190 Identities=25% Similarity=0.286 Sum_probs=161.8
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEecccc--ccCCCCCHHHHHHHHHhcc
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHD--VHIGEMTVRETLAFSARCQ 75 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~--~~~~~lTv~e~l~f~~~~~ 75 (1247)
.+|+|+||||||||.++|+|..+|+ +|+|.++|++..... ..+.+-+|+||+ .+-|..||++.|.-+.+.+
T Consensus 36 lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~ 112 (252)
T COG1124 36 LGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH 112 (252)
T ss_pred EEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC
Confidence 5899999999999999999999997 999999998765432 357899999996 4678889999998765432
Q ss_pred CCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHH
Q 000867 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
+.. +.+..+.++|+.+||++.. -++.+..|||||||||+|
T Consensus 113 ~~~------------------------------------~~~~~i~~~L~~VgL~~~~----l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 113 GLS------------------------------------KSQQRIAELLDQVGLPPSF----LDRRPHELSGGQRQRIAI 152 (252)
T ss_pred Ccc------------------------------------HHHHHHHHHHHHcCCCHHH----HhcCchhcChhHHHHHHH
Confidence 211 0111256789999998643 357788999999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||||..+|++|+||||||+||+....+|++.|.++.+. .+.+.+.++|+..-+.++||||++|++|++++.++.+++.+
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998664 56778889999999999999999999999999999998864
No 115
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=312.55 Aligned_cols=201 Identities=26% Similarity=0.388 Sum_probs=165.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 67889887763 23599999999999999999999999999999999998653 4899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 QE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
.. ..++.++|++|++.+++.+||+||+.+....+.. ........++.++++++.+||.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 32 2245689999999998899999999876543211 00122333456788999999987777665 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~ 206 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADR 206 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998764 899999999985 35556666
No 116
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=282.67 Aligned_cols=180 Identities=27% Similarity=0.410 Sum_probs=161.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCHHH
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYE 782 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 782 (1247)
..+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||.+++... ..-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 359999999999999999999999999999999999876 35899999999876432 12389999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCH
Q 000867 783 SLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 862 (1247)
Q Consensus 783 ~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~ 862 (1247)
|+.|+..++ ..++.++.+++.+.+..+||.+..++.+- .||||||||+.|||||..+|++|+||||.+.||.
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~-----qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYIW-----QLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccceE-----eecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 46678888899999999999998887763 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEeccCChHHH
Q 000867 863 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIF 894 (1247)
Q Consensus 863 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~ 894 (1247)
-++++++++|-++.+ .|+.++++||+....+|
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieEAlf 198 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEEALF 198 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHh
Confidence 999999999999764 59999999999877666
No 117
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.5e-34 Score=309.09 Aligned_cols=182 Identities=29% Similarity=0.385 Sum_probs=152.3
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCC-CCCcCHH
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIH-SPFVTVY 781 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~-~~~ltv~ 781 (1247)
+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+......++.++|++|++.. +..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4599999999999999999999999999999999998653 489999999876443445678999999742 3457999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000867 782 ESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 861 (1247)
Q Consensus 782 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD 861 (1247)
||+.+..... . . .+++++++++.+|+.+..++.+ +.||||||||++|||||+.+|++++|||||+|||
T Consensus 91 e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D-A---GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C-c---cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 1245788999999988777765 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 862 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 862 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.++..+.+.|++++++|+|||+++|++.. +.+..|+
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~~~~~d~ 195 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYEF-LAKVCDR 195 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhCCE
Confidence 999999999999987779999999999863 4445555
No 118
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-34 Score=294.64 Aligned_cols=201 Identities=27% Similarity=0.332 Sum_probs=161.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++.+|++..++... ....+|+|||++|.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 477889887765321 123699999999999999999999999999999999998764 489999999876
Q ss_pred Ccc----cccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCC
Q 000867 757 KQE----TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGESG 829 (1247)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~ 829 (1247)
... .+.+.+-+|+||+. +.|..||++.|.=.... ...++.+ +++.++++.+||.+. .+.. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 543 36678899999975 66889999988543322 2223332 338899999999653 3332 357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||||+||||||+.+|++|+||||||.||+..+..|+++|.++.++ +.|.|+++||.+. +..+.|+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdR 211 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDR 211 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhh
Confidence 9999999999999999999999999999999999999999999998755 7899999999753 4445565
No 119
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-34 Score=278.11 Aligned_cols=181 Identities=27% Similarity=0.384 Sum_probs=155.9
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc-------cccceEEEeccCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-------TFTRISGYCEQNDI 773 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~~~v~q~~~ 773 (1247)
+...||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++.... .+.+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 456799999999999999999999999999999999998764 489999999986431 23467999999999
Q ss_pred CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000867 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1247)
Q Consensus 774 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~l 853 (1247)
+.|++|..||+.....++.... ....+...+.++.+||.+..+.+. .+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999988877764322 222334678999999988777664 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCCh
Q 000867 854 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSI 891 (1247)
Q Consensus 854 DEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~ 891 (1247)
||||-+||.+|...|.+++-.+.+ .|.|.|++||||+.
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~L 209 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQL 209 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHH
Confidence 999999999999999999988764 49999999999963
No 120
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=309.45 Aligned_cols=191 Identities=26% Similarity=0.367 Sum_probs=162.8
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCC----CCcccceEEEecccc-ccCCCCCHHHHHHHHHhccC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMD----EFVPQRTAAYISQHD-VHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~----~~~~~~~i~yv~Q~~-~~~~~lTv~e~l~f~~~~~~ 76 (1247)
++|+||||||||||+++|+|+++|. +|+|.++|.+.. ....++.+|||+|++ ..+..-||.|.+.|+....+
T Consensus 33 ~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g 109 (235)
T COG1122 33 VLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLG 109 (235)
T ss_pred EEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcC
Confidence 7899999999999999999999997 899999998865 233468899999985 35566799999999876543
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. .++.+.+++++++.+||.+..+ +.+..|||||||||+||
T Consensus 110 ~~----------------------------------~~e~~~rv~~~l~~vgl~~~~~-----r~p~~LSGGqkqRvaIA 150 (235)
T COG1122 110 LP----------------------------------REEIEERVAEALELVGLEELLD-----RPPFNLSGGQKQRVAIA 150 (235)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCchhhcc-----CCccccCCcceeeHHhh
Confidence 21 1123445788899999987654 55678999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
.+|+.+|++++|||||||||+..+.++++.++++... ++.++++++|+.+.+..++|++++|++|+++++|++.++.+
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 9999999999999999999999999999999998653 45677779999999999999999999999999999877653
No 121
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.8e-34 Score=308.24 Aligned_cols=193 Identities=29% Similarity=0.384 Sum_probs=160.7
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5678877653 2359999999999999999999999999999999999865 348999999987643
Q ss_pred -ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
...++.++|++|++.+++.+||+||+.+....+. . .+++++++++.+++.+..++.+ +.||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2334578999999999999999999987654321 1 1345778999999988777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+-+..|+
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 195 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADR 195 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999998777899999999986 23334454
No 122
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=330.90 Aligned_cols=191 Identities=24% Similarity=0.348 Sum_probs=162.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++..... ++.++||+|+..+++.+||+||+.|+.+.++..
T Consensus 34 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~- 109 (351)
T PRK11432 34 MVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVP- 109 (351)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCC-
Confidence 47999999999999999999999987 9999999998765433 478999999999999999999999986532210
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+.++.++++++.+||.+.. ++.+..|||||||||+|||||
T Consensus 110 ---------------------------------~~~~~~~v~~~l~~~gl~~~~-----~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 110 ---------------------------------KEERKQRVKEALELVDLAGFE-----DRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhh-----cCChhhCCHHHHHHHHHHHHH
Confidence 011223467788999997544 455678999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|+++..|+++++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ-FNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999988654 3566777999999999999999999999999999998874
No 123
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.1e-34 Score=330.02 Aligned_cols=191 Identities=20% Similarity=0.300 Sum_probs=162.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++..... ++.++||+|++.+++++||+||+.|+.+
T Consensus 21 i~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~ 97 (363)
T TIGR01186 21 IFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPE 97 (363)
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998765332 4689999999999999999999999765
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+.. ..+..+.+.++++.+||+...+ +.+..|||||||||
T Consensus 98 ~~~~~----------------------------------~~~~~~~~~~~l~~vgL~~~~~-----~~p~~LSGGq~QRV 138 (363)
T TIGR01186 98 LLGWP----------------------------------EQERKEKALELLKLVGLEEYEH-----RYPDELSGGMQQRV 138 (363)
T ss_pred HcCCC----------------------------------HHHHHHHHHHHHHhcCCchhhh-----CChhhCCHHHHHHH
Confidence 43210 0112234567899999975544 45568999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|+++||||||+|||+.++.++.+.++++.+. .+.+|+.++|+.+++..++|+|++|++|+++..|+++++
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999999999999999999987553 356677799999999999999999999999999998887
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 218 ~ 218 (363)
T TIGR01186 218 L 218 (363)
T ss_pred H
Confidence 5
No 124
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.7e-34 Score=331.78 Aligned_cols=192 Identities=21% Similarity=0.308 Sum_probs=162.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCcee--eEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFS--GRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~--G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+|||||||||||++|+|+.+|+ + |+|.++|+++.... .++.++||+|++.+++.+||+|||.|+.+.++.
T Consensus 33 ~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~ 109 (362)
T TIGR03258 33 LLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKM 109 (362)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 7 99999998875433 246799999999999999999999998643211
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
. ..+.+..++++++.+||.+..+ +.+++|||||||||+|||
T Consensus 110 ~----------------------------------~~~~~~~v~~~l~~~gL~~~~~-----~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 110 P----------------------------------KADIAERVADALKLVGLGDAAA-----HLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred C----------------------------------HHHHHHHHHHHHHhcCCCchhh-----CChhhCCHHHHHHHHHHH
Confidence 0 0112234677899999976554 456689999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||+.+|++++|||||+|||+.++.++.+.|+++.+..++++++.++|+.+++..++|+|++|++|+++..|+++++.
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999998765432567777999999999999999999999999999998874
No 125
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.8e-35 Score=341.01 Aligned_cols=193 Identities=22% Similarity=0.381 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.||||||||+||||+.++|...++|+ +|+|.+||+|+.+.++ |++||+|.|||.+|.. ||+|||.|+...
T Consensus 496 ~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~~--- 568 (716)
T KOG0058|consen 496 VVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLDN--- 568 (716)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCCC---
Confidence 48999999999999999999999998 9999999999977654 5889999999998865 999999997531
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
...+++..++.+ .+..=-+.+++++.||.||+++. .||||||||++|||
T Consensus 569 ----------------------~t~e~i~~AAk~--------ANah~FI~~~p~gY~T~VGEkG~-qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 569 ----------------------ATDEEIEAAAKM--------ANAHEFITNFPDGYNTVVGEKGS-QLSGGQKQRIAIAR 617 (716)
T ss_pred ----------------------CCHHHHHHHHHH--------hChHHHHHhCccccccccCCccc-cccchHHHHHHHHH
Confidence 011111112111 11112345699999999997666 79999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||++||+||||||.||+||++++..+-+.|.+..+ +.|+++|.|.. +..+.+|+|+++++|++++.|+++++++
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRL-STV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRL-STVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhh-hHhhhccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999999999999987643 35566577766 5678899999999999999999999874
No 126
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.1e-35 Score=341.28 Aligned_cols=195 Identities=28% Similarity=0.428 Sum_probs=162.4
Q ss_pred CCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcC
Q 000867 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1247)
Q Consensus 674 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g 753 (1247)
-.+.++|+||+++|+..+ +.++|||+||+|+|||.+||+||||+||||+.+.|-...+ +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 356899999999997553 4579999999999999999999999999999999998765 4589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHH-----HHHHHHcCCCccccccccCC
Q 000867 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFI-----EEIMELVELNPLRQSLVGLP 825 (1247)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v-----~~~l~~l~l~~~~~~~~g~~ 825 (1247)
.|+++ ..+++.+|+|.|+|.+|. -|++||+.|+.. +.+.++..... .+.+ .++.+-.||.||..
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEK 601 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCc
Confidence 99764 456789999999999986 599999998753 33333322111 1222 34566688999864
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
| ..||||||||++|||||++||+||||||+||.||+++...++++|.+..+ ++|||+++|+.|
T Consensus 602 G-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS 664 (716)
T KOG0058|consen 602 G-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS 664 (716)
T ss_pred c-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh
Confidence 4 37999999999999999999999999999999999999999999988764 699999999886
No 127
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.4e-34 Score=312.31 Aligned_cols=198 Identities=24% Similarity=0.279 Sum_probs=161.5
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC-----CCCeEEEEEEEcC
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 753 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~-----~~~~~~G~i~i~g 753 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5677777653 235999999999999999999999999999999999976 4 3589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ..+++.++|++|++.++ .+||+||+.+....+. ....+..+++++++++.+|+.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87542 22356789999998888 7999999988654331 11222234567889999999876555430 24
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++. .+.+..|+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~ 209 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADR 209 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCE
Confidence 79999999999999999999999999999999999999999999998776 99999999986 45556676
No 128
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=7.5e-34 Score=302.61 Aligned_cols=178 Identities=26% Similarity=0.336 Sum_probs=149.8
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc-----ccccceEEEeccCCC-CCC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-----ETFTRISGYCEQNDI-HSP 776 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~-~~~ 776 (1247)
+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 4699999999999999999999999999999999998653 48999999987631 123557899999973 233
Q ss_pred CcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000867 777 FVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1247)
Q Consensus 777 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEp 856 (1247)
..|++||+.+..... ..+.+..+++++++++.+|+.+..++.+ +.||||||||++|||||+.+|++++||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 479999998865322 1233444556889999999988777765 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 857 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
|+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999998777999999999985
No 129
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.2e-34 Score=282.72 Aligned_cols=185 Identities=23% Similarity=0.348 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
++-|+||||||||||||+|.++..|+ .|+|.+||+++.... .||+||+|+||.-+++..||.||+.|+.+.
T Consensus 30 f~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v 106 (223)
T COG2884 30 FVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRV 106 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhc
Confidence 46799999999999999999999997 999999999985432 358999999999999999999999998776
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. ..+.++.+.++|+.+||.+..+ ..+..|||||||||+
T Consensus 107 ~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~-----~lP~~LSGGEQQRva 147 (223)
T COG2884 107 IGKP----------------------------------PREIRRRVSEVLDLVGLKHKAR-----ALPSQLSGGEQQRVA 147 (223)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHhccchhhh-----cCccccCchHHHHHH
Confidence 5421 1223445778899999987665 346689999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
||||++.+|++|+-||||..||+..+.+|++.+.++.+ .+|+|++.+|+..-+..+-.+++.|++|+++....
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999999864 47888889999999999999999999999986653
No 130
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.1e-33 Score=309.29 Aligned_cols=201 Identities=24% Similarity=0.333 Sum_probs=162.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 5678888776311 0124699999999999999999999999999999999998653 4899999998764
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000867 758 QE---T---FT-RISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1247)
Q Consensus 758 ~~---~---~~-~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 830 (1247)
.. . ++ +.++|++|++.+++.+|++||+.+....+. .......+++.++++.+|+.+..+..+ +.|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 12 568999999988889999999988654321 122333456788999999987766654 469
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 831 SgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++.++ |+|||+++|++.. + +..|+
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~-~-~~~d~ 210 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLEL-A-KKLDR 210 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-hhcCE
Confidence 999999999999999999999999999999999999999999998754 8999999999863 3 33465
No 131
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.2e-34 Score=308.91 Aligned_cols=186 Identities=27% Similarity=0.366 Sum_probs=153.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCC-CCCCc
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDI-HSPFV 778 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 778 (1247)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 4699999999999999999999999999999999998653 47999999987642 234567899999975 35678
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000867 779 TVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 858 (1247)
Q Consensus 779 tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEpts 858 (1247)
|++||+.+....+ .......++.++++++.+|+.+..++.+ ..||||||||++|||||+.+|++++|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 1223334456788999999987666654 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 859 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 859 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~ 203 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADR 203 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999998777899999999985 34444554
No 132
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.7e-34 Score=308.32 Aligned_cols=198 Identities=24% Similarity=0.335 Sum_probs=163.0
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|++++|||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 5678877653 23599999999999999999999999999999999998653 47999999987632
Q ss_pred -----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 759 -----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 759 -----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
...++.++|++|++.+++.+|++||+.+...... ....++.+++++++++.+|+.+..+..+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345678999999999999999999987642111 1223344556788999999987766665 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~ 204 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADR 204 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998777899999999985 34444554
No 133
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=313.50 Aligned_cols=196 Identities=26% Similarity=0.337 Sum_probs=163.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 56788887653 23599999999999999999999999999999999998653 4799999998764
Q ss_pred cccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
. ..+.++|++|++.+++.+||+||+.+....+ .......+++++++++.+|+.+..+..+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999998888899999998764332 1223344556889999999987766654 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++. .+.+..|+
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~ 198 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATE 198 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999854 5899999999986 45556676
No 134
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.7e-34 Score=327.77 Aligned_cols=191 Identities=22% Similarity=0.311 Sum_probs=161.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|+.+|+ +|+|.++|+++.... .++.++|++|+..+++..||+||+.++...
T Consensus 33 i~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~ 109 (343)
T TIGR02314 33 IYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLEL 109 (343)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999999876432 246799999999999999999999986543
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. ..+.+..+.++++.+||.+..| +.+..|||||||||+
T Consensus 110 ~~~~----------------------------------~~~~~~~v~e~l~~vgL~~~~~-----~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 110 DNTP----------------------------------KDEIKRKVTELLALVGLGDKHD-----SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHH
Confidence 2110 0112224567899999986554 455689999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++|+|||||||||+.++.++++.|+++.+.. +.+|++++|+.+.+.++||+|++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999999986643 556777899999999999999999999999999988764
No 135
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.7e-34 Score=330.44 Aligned_cols=191 Identities=24% Similarity=0.361 Sum_probs=162.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .+|.++||+|+..+|+.+||+||+.|+.+.++..
T Consensus 32 ~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~- 107 (353)
T TIGR03265 32 FVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMG- 107 (353)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999987 999999999876433 3578999999999999999999999976432100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+.+..++++++.+||++..+ +.+.+|||||||||+|||||
T Consensus 108 ---------------------------------~~~~~~~~~~~l~~l~L~~~~~-----~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 108 ---------------------------------RAEVAERVAELLDLVGLPGSER-----KYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCCchhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0112234678899999986554 55668999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|+++|||||+++||+.++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|++++.|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999987654 3566777899999999999999999999999999988875
No 136
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.3e-33 Score=321.66 Aligned_cols=197 Identities=25% Similarity=0.379 Sum_probs=168.1
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++++. ++.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67888887763 24599999999999999999999999999999999998663 4899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++.+++++++++.+||.+..++.++ .||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCchh-----hCCHHHH
Confidence 3 2345679999999999999999999998775542 2234445568899999999988887764 6999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+..|+
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~ 201 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDR 201 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999864 799999999986 56666676
No 137
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-34 Score=312.32 Aligned_cols=202 Identities=25% Similarity=0.305 Sum_probs=165.8
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5677887765310 0012699999999999999999999999999999999998763 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124678999999999999999999988654331 233344556789999999987776654 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~ 210 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDR 210 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998765 899999999985 45566676
No 138
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.1e-33 Score=305.80 Aligned_cols=185 Identities=24% Similarity=0.349 Sum_probs=155.9
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC---c----ccccceEEEeccCCCCC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFTRISGYCEQNDIHS 775 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~~~v~q~~~~~ 775 (1247)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 4599999999999999999999999999999999998653 4799999998743 1 12346789999999999
Q ss_pred CCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000867 776 PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 855 (1247)
Q Consensus 776 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDE 855 (1247)
+.+|++||+.+....+ ....+...++++++++.+|+.+..++.+ ..||||||||++|||||+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998865432 1223444566889999999987777665 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 856 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 856 ptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+|||+.+...+.+.|+++.++|.|||+++|++.. .+..|+
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~--~~~~d~ 202 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEV--AKQADR 202 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH--HhhcCE
Confidence 999999999999999999987778999999999852 344444
No 139
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=301.48 Aligned_cols=185 Identities=26% Similarity=0.391 Sum_probs=160.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+|||-|+||||||||+|+|+|+..|+ +|.|.+||+-+.+. ..+|++|||+||..+||.+||+.|+.|+..
T Consensus 26 vTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~ 102 (352)
T COG4148 26 ITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMW 102 (352)
T ss_pred eEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhc
Confidence 58999999999999999999999998 99999999765221 235899999999999999999999999753
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
.. .....|.+.+.||+++.. ++++.+|||||||||
T Consensus 103 ~~----------------------------------------~~~~fd~iv~lLGI~hLL-----~R~P~~LSGGEkQRV 137 (352)
T COG4148 103 KS----------------------------------------MRAQFDQLVALLGIEHLL-----DRYPGTLSGGEKQRV 137 (352)
T ss_pred cc----------------------------------------chHhHHHHHHHhCcHHHH-----hhCCCccCcchhhHH
Confidence 21 011235677888987654 467788999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|+|||++.|++|+||||.+.||-....+++-.|.++.++. +.-|+.++|..+|+.+++|+|++|++|++...|+.+++
T Consensus 138 AIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v 216 (352)
T COG4148 138 AIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEV 216 (352)
T ss_pred HHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHH
Confidence 99999999999999999999999999999999999987754 56678899999999999999999999999999999887
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 217 ~ 217 (352)
T COG4148 217 W 217 (352)
T ss_pred h
Confidence 5
No 140
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1e-33 Score=329.47 Aligned_cols=202 Identities=26% Similarity=0.349 Sum_probs=168.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEc
Confidence 377889988763 24699999999999999999999999999999999998663 479999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ...++.+||++|+..+++.+||+|++.+....... .....+..+++++++++.+|+.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 53 23466799999999998899999999875321100 01112334567899999999998888775 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||+.|||||+++|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+..|+
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adr 208 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDE 208 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877899999999985 45566776
No 141
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-33 Score=308.74 Aligned_cols=198 Identities=26% Similarity=0.393 Sum_probs=163.1
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 56777776531 114699999999999999999999999999999999998653 48999999987643
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
...++.++|++|++.+++.+|++||+.+....+. ...+..+++++++++.++|.+..++.+ ..|||||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345568999999998889999999988654331 223334456788999999987777665 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+-+..|+
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 201 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDR 201 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999865 599999999986 34455565
No 142
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.9e-33 Score=307.25 Aligned_cols=199 Identities=25% Similarity=0.325 Sum_probs=163.3
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 56788887662 123599999999999999999999999999999999998653 4899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. .+++.++|++|++.+++.+|++||+.+....+ ....++.++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567899999998888899999998865432 1233344456788999999987666654 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.++|.|+|+++|+++. +-+..|+
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~-~~~~~d~ 206 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGL-ISRRSYR 206 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhCCE
Confidence 999999999999999999999999999999999999999999987778999999999863 3334454
No 143
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.1e-34 Score=324.75 Aligned_cols=191 Identities=26% Similarity=0.356 Sum_probs=161.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++.+++.+||+||+.|.+...+..
T Consensus 35 i~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 111 (306)
T PRK13537 35 CFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLS 111 (306)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999987542 23467999999999999999999999865443210
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+.+..++++++.++|.+..++.+ ++||||||||++||+|
T Consensus 112 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~a 152 (306)
T PRK13537 112 ----------------------------------AAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARA 152 (306)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHH
Confidence 0011223567888999987776655 4799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|++++|||||+|||+.++.++++.++++.+ .+++|+.++|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 153 L~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 153 LVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999753 35677778999999999999999999999999999988754
No 144
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.2e-34 Score=308.71 Aligned_cols=187 Identities=27% Similarity=0.412 Sum_probs=152.6
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCC--CcCH
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSP--FVTV 780 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~--~ltv 780 (1247)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++. ..++.++|++|++.+.+ .+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 3599999999999999999999999999999999998653 4799999998654 24567899999987643 3799
Q ss_pred HHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCC
Q 000867 781 YESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 859 (1247)
Q Consensus 781 ~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsg 859 (1247)
+||+.+....... .....+..+++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00111233456889999999987766655 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 860 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 860 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~ 201 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDR 201 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999998777899999999986 34455565
No 145
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=317.42 Aligned_cols=188 Identities=23% Similarity=0.281 Sum_probs=158.0
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FTRISGYCEQNDI 773 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~~~v~q~~~ 773 (1247)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 346799999999999999999999999999999999998753 479999999876421 1 1356899999999
Q ss_pred CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000867 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFM 853 (1247)
Q Consensus 774 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~l 853 (1247)
+++.+||+||+.+....+ .......+++++++++.+||.+..++.+ +.||||||||++|||||+.+|++|+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999998865432 1223344556889999999988777765 36999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 854 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 854 DEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~ 230 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDR 230 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999999999998654 899999999986 35556666
No 146
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-33 Score=302.94 Aligned_cols=187 Identities=24% Similarity=0.326 Sum_probs=158.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 56778877653 23599999999999999999999999999999999998663 4799999998764
Q ss_pred c--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..+++++++++.+|+.+..++.+ +.||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999988899999999987654321 1 12345788999999987766654 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
||++||+||+++|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 190 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL 190 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh
Confidence 9999999999999999999999999999999999999998777899999999975
No 147
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=313.47 Aligned_cols=201 Identities=27% Similarity=0.306 Sum_probs=161.4
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccc
Confidence 46777766531 14599999999999999999999999999999999998653 47999999987643
Q ss_pred c------cccceEEEeccCCCCCCCcCHHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 759 E------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 759 ~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
. ..++.++|++|++.+++.+||+||+.+...... .........++++.++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA----- 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----
Confidence 1 234578999999999999999999977532110 001111233456788999999987666654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. +.+..|+
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~-~~~~~d~ 214 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDL-AREYADR 214 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhCCE
Confidence 479999999999999999999999999999999999999999999998754 8999999999863 5555666
No 148
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-34 Score=303.98 Aligned_cols=192 Identities=23% Similarity=0.329 Sum_probs=168.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+-.++|..||.||..|+.+
T Consensus 56 IfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe 132 (386)
T COG4175 56 IFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 132 (386)
T ss_pred EEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee
Confidence 46899999999999999999999997 9999999998754332 3679999999999999999999999988
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
.++... ++.++...+.|+..||....+ +++++||||+||||
T Consensus 133 v~Gv~~----------------------------------~er~~~a~~~l~~VgL~~~~~-----~yp~eLSGGMqQRV 173 (386)
T COG4175 133 VQGVPK----------------------------------AEREERALEALELVGLEGYAD-----KYPNELSGGMQQRV 173 (386)
T ss_pred ecCCCH----------------------------------HHHHHHHHHHHHHcCchhhhh-----cCcccccchHHHHH
Confidence 876431 123345677899999987765 45678999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
.|||||+.+|+|||+|||+|+|||--+.+..+.|.++-+.. ++||+.++|+.+|++++.|||.+|++|+++..|+++++
T Consensus 174 GLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 174 GLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred HHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHH
Confidence 99999999999999999999999999999999988876655 55677799999999999999999999999999999998
Q ss_pred HH
Q 000867 234 LD 235 (1247)
Q Consensus 234 ~~ 235 (1247)
+.
T Consensus 253 l~ 254 (386)
T COG4175 253 LL 254 (386)
T ss_pred Hc
Confidence 73
No 149
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.1e-34 Score=329.99 Aligned_cols=191 Identities=27% Similarity=0.359 Sum_probs=162.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.++||+|++.+++.+||+|||.|+.+.++..
T Consensus 42 ~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 117 (375)
T PRK09452 42 FLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTP- 117 (375)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCC-
Confidence 47999999999999999999999987 999999999875433 3478999999999999999999999975432110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+.++.++++++.+||.+..+ +.+.+|||||||||+|||||
T Consensus 118 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~p~~LSgGq~QRVaLARaL 159 (375)
T PRK09452 118 ---------------------------------AAEITPRVMEALRMVQLEEFAQ-----RKPHQLSGGQQQRVAIARAV 159 (375)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0111234567889999976554 45668999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|+++|||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|+++..|+++++.
T Consensus 160 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 160 VNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999986643 566777999999999999999999999999999988874
No 150
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=287.72 Aligned_cols=193 Identities=21% Similarity=0.345 Sum_probs=164.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++++|||||||||...++.|+..|+ +|+|.++|.+++.... +.-+||+||++..|..+||+|||+-..+.+.
T Consensus 32 iVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~ 108 (243)
T COG1137 32 IVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIRE 108 (243)
T ss_pred EEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhh
Confidence 47899999999999999999999998 9999999999976543 3469999999999999999999987655432
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. ....+.+...+++|+.+.+.+.++. ....||||||||+.||
T Consensus 109 ~d--------------------------------~~~~~~~~~l~~LL~ef~i~hlr~~-----~a~sLSGGERRR~EIA 151 (243)
T COG1137 109 KD--------------------------------LKKAERKEELDALLEEFHITHLRDS-----KAYSLSGGERRRVEIA 151 (243)
T ss_pred cc--------------------------------hhHHHHHHHHHHHHHHhchHHHhcC-----cccccccchHHHHHHH
Confidence 10 0011233456789999999877664 4557999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|||+.+|+.++||||++|+||.+..+|-+.++.+.. ++..|+++-|+..|...+|||.+++.+|+++.+|+++++.+
T Consensus 152 RaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 152 RALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred HHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999999999988754 47778878999999999999999999999999999988763
No 151
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.6e-33 Score=308.25 Aligned_cols=195 Identities=28% Similarity=0.402 Sum_probs=158.8
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCC
Confidence 5677776552 23599999999999999999999999999999999998653 47999999987643
Q ss_pred c---c-ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCCHH
Q 000867 759 E---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELV-ELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 759 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lSgG 833 (1247)
. . .++.++|++|++.+++.+|++||+.+...... ....++.+.++++.+ ++.+..++.+ +.||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHH
Confidence 2 1 24568999999999999999999988654321 122234566778887 4666556554 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADR 201 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccE
Confidence 999999999999999999999999999999999999999998777899999999985 34455665
No 152
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-33 Score=310.79 Aligned_cols=198 Identities=27% Similarity=0.367 Sum_probs=162.9
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCc
Confidence 46777776531 13599999999999999999999999999999999998653 47999999987543
Q ss_pred ---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCHH
Q 000867 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP--LRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSgG 833 (1247)
...++.++|++|++.+++.+|++||+.+....+ ..+.+..++.+.++++.+|+.+ ..++.+ +.||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYP-----HELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHH
Confidence 233557899999999999999999998765432 1233444556889999999985 555543 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+..|+
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~ 205 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADR 205 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998764 899999999985 34455565
No 153
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.9e-33 Score=311.94 Aligned_cols=199 Identities=26% Similarity=0.344 Sum_probs=164.4
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67888887763 23599999999999999999999999999999999998653 4799999998754
Q ss_pred c-----------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000867 758 Q-----------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1247)
Q Consensus 758 ~-----------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 826 (1247)
. ...++.++|++|++.+++.+|++||+.+...... ....+...++++++++.+|+.+..+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1234578999999999989999999987532111 1233344556888999999987766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~ 213 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADR 213 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 469999999999999999999999999999999999999999999998777899999999985 35555666
No 154
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.3e-33 Score=309.28 Aligned_cols=199 Identities=22% Similarity=0.339 Sum_probs=164.6
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788887653 2359999999999999999999999999999999999865 34799999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 758 Q-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
. ...++.++|++|++.+++.+||+|++.+...... .......++++.++++.+|+.+..+..+ +.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 3 1235578999999998999999999987542111 1233444566889999999987766654 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++++|||||+|||..++..+.+.|+++.++|+|||+++|++. ++-+..|+
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 205 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASR 205 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998777899999999986 34455666
No 155
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-33 Score=312.90 Aligned_cols=202 Identities=25% Similarity=0.284 Sum_probs=162.0
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 46778876652 024599999999999999999999999999999999998653 4799999998754
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 826 (1247)
.. .+++.++|++|++.+++.+||+||+.+...... .........++++.++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 21 235678999999999999999999976421100 001112233456788999999987766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++.. +.+..|+
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~-~~~~~d~ 215 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDL-AKKYADR 215 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH-HHHhcCe
Confidence 469999999999999999999999999999999999999999999998654 8999999999863 4556666
No 156
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-33 Score=315.94 Aligned_cols=203 Identities=21% Similarity=0.301 Sum_probs=165.0
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 67889988764110 0124699999999999999999999999999999999998663 4899999998865
Q ss_pred c-----ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC--ccccccccCCCCCC
Q 000867 758 Q-----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN--PLRQSLVGLPGESG 829 (1247)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~g~~~~~~ 829 (1247)
. ...++.+||++|++. .+...||+|++.|..... ..+.++..++++++++.+||. +..++.+ +.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 3 134567999999863 233579999998865332 234455566788999999996 5556554 47
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++....|+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dr 214 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADR 214 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999998765 899999999985 45566777
No 157
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=310.00 Aligned_cols=192 Identities=22% Similarity=0.286 Sum_probs=162.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 11 ~~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~ 75 (257)
T PRK11247 11 TPLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAP 75 (257)
T ss_pred CcEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEE
Confidence 3588999998763 23599999999999999999999999999999999998653 47999999876
Q ss_pred CCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 756 KKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 756 ~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
.. ..++.++|++|++.+++.+||+||+.+... . ..++++.++++.+|+.+..+..+ ..||||||
T Consensus 76 ~~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqk 139 (257)
T PRK11247 76 LA--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQK 139 (257)
T ss_pred HH--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHH
Confidence 53 235678999999999998999999987421 0 12345778999999987766654 46999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. .+.+..|+
T Consensus 140 qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~ 203 (257)
T PRK11247 140 QRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADR 203 (257)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999864 4899999999986 34556676
No 158
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.8e-33 Score=299.10 Aligned_cols=185 Identities=25% Similarity=0.329 Sum_probs=156.1
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEccc
Confidence 4677776653 24699999999999999999999999999999999998653 47999999987542
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
..+++.++|++|++.+++.+|+.|++.+....+. . + ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2234678999999888888999999987643321 1 1 234678999999988777665 369999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
|++|||+++.+|++++|||||+|||..+...+.+.|+++.++|.|||+++|++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 999999999999999999999999999999999999998777899999999985
No 159
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.6e-33 Score=312.65 Aligned_cols=200 Identities=21% Similarity=0.306 Sum_probs=165.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478999987763 24599999999999999999999999999999999998653 479999999876
Q ss_pred Ccc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000867 757 KQE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1247)
Q Consensus 757 ~~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 830 (1247)
... ..++.++|++|+..+++.+|+.||+.+...... ..+.+..++.+.++++.+|+.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 124568999999999999999999987543211 1223334456788999999988777665 469
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 831 SgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~ 213 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADH 213 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCE
Confidence 999999999999999999999999999999999999999999998755 899999999975 34555666
No 160
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-33 Score=306.93 Aligned_cols=204 Identities=24% Similarity=0.279 Sum_probs=159.4
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+... .....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5678888766310 0012599999999999999999999999999999999998653 4799999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000867 758 Q------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1247)
Q Consensus 758 ~------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 828 (1247)
. ..+++.++|++|++ .+++.+||+||+.+......+ ....+..+..++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 23456799999998 466789999999876543321 111111122235788999985 4555554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+-+..|+
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 215 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADR 215 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 69999999999999999999999999999999999999999999998765 899999999985 34445665
No 161
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.4e-33 Score=306.58 Aligned_cols=191 Identities=26% Similarity=0.380 Sum_probs=159.6
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 56778877653 23599999999999999999999999999999999998653 4799999998764
Q ss_pred cc--cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 QE--TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~~--~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
.. ...+.++|++|++.+++.+|++||+.+....+ ....+...+.++++++.+|+.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 31 22346899999998888999999998765432 1223334456788999999987776665 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCCh
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSI 891 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~ 891 (1247)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|++..
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~ 195 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE 195 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh
Confidence 999999999999999999999999999999999999999874 58999999999864
No 162
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-33 Score=303.28 Aligned_cols=195 Identities=33% Similarity=0.459 Sum_probs=161.2
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCcccc
Confidence 5677777653 235999999999999 9999999999999999999998653 48999999987643
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
...++.++|++|++.+++.+||+|++.+....+. ...++.++.++++++.+|+.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2235678999999999999999999987654431 222333456788999999987777665 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|||||+.+|++++|||||+|||+.+...+.+.|+++++ +.|||+++|++.. +.+..|+
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~~-~~~~~d~ 198 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVED-VESLCNQ 198 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHHH-HHHhCCE
Confidence 99999999999999999999999999999999999999875 5999999999863 4445565
No 163
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-34 Score=295.46 Aligned_cols=204 Identities=25% Similarity=0.335 Sum_probs=169.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCccc----ceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQ----RTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~----~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++..+|...+|++|||.||+..++..+.
T Consensus 32 i~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~ 108 (250)
T COG0411 32 IVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARL 108 (250)
T ss_pred EEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhh
Confidence 47999999999999999999999998 99999999998765543 458888999999999999999999865432
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. +.......+ ...+..+..+...++|+.+||.+.+|+..| +||+|||||+.||
T Consensus 109 ~---~~~~l~~~~-------------------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIA 161 (250)
T COG0411 109 G---LSGLLGRPR-------------------ARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIA 161 (250)
T ss_pred h---hhhhhcccc-------------------chhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHH
Confidence 1 000000000 000122344556789999999998887665 5999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|||+.+|++|+||||.+||.+..+.++.+.++++.+ ..+.+|++|.|+++-+..+||||+||+.|+++..|+++++.+
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999999999999999865 356888889999999999999999999999999999998763
No 164
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-33 Score=322.28 Aligned_cols=191 Identities=26% Similarity=0.326 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.+...+..
T Consensus 21 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 97 (302)
T TIGR01188 21 VFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLP 97 (302)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999876432 22457999999999999999999999865432210
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+....++++++.+||.+..++. ++.|||||||||+||+|
T Consensus 98 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~a 138 (302)
T TIGR01188 98 ----------------------------------KDEAEERAEELLELFELGEAADRP-----VGTYSGGMRRRLDIAAS 138 (302)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCChhHhCCc-----hhhCCHHHHHHHHHHHH
Confidence 001112356789999998666554 45799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|++++|||||+|||+.++..+++.++++.+ . +++|++++|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 139 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 139 LIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 9999999999999999999999999999998754 2 5667778999999999999999999999999999888754
No 165
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.1e-33 Score=299.25 Aligned_cols=184 Identities=28% Similarity=0.352 Sum_probs=156.0
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4677776653 24599999999999999999999999999999999998653 47999999987542
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
..+++.++|++|++.+++.+|++|++.+.... . .+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~----~-----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD----H-----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc----c-----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456789999999888899999999875311 1 2345788999999987776664 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
|++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++|+|+|+++|++..
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~ 187 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLG 187 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchh
Confidence 9999999999999999999999999999999999999887779999999999853
No 166
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=312.37 Aligned_cols=200 Identities=26% Similarity=0.338 Sum_probs=165.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ +++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 478899988763 123599999999999999999999999999999999998653 479999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ...++.+||++|++. .++..||.||+.|..... ..+.+..+++++++++.+||.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223457999999963 345689999998764321 2333444556889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+..|+
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~ 207 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQ 207 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998777999999999976 35566777
No 167
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-33 Score=314.85 Aligned_cols=202 Identities=26% Similarity=0.298 Sum_probs=164.8
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|++++++... ...+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67899998874210 0124599999999999999999999999999999999998663 4799999998764
Q ss_pred c-------ccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000867 758 Q-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1247)
Q Consensus 758 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 827 (1247)
. ..+++.+|||+|++ .++ ..||+||+.|..... ..+.++.+++++++++.+||. +..++.+
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP----- 143 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----
Confidence 2 13456799999986 344 479999998875322 223444456788999999996 5556554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+..|+
T Consensus 144 ~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~dr 215 (290)
T PRK13634 144 FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQ 215 (290)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 479999999999999999999999999999999999999999999998764 899999999986 56667777
No 168
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=308.29 Aligned_cols=199 Identities=28% Similarity=0.369 Sum_probs=164.4
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67788887653 24599999999999999999999999999999999998653 4799999998764
Q ss_pred cc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
.. ..++.++|++|++.+++.+|+.||+.+....+. ..+.+..+++++++++.+|+.+..+..+ +.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 31 134568999999999998999999987643221 1223344566888999999987666554 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+..|+
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~ 206 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCER 206 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998777999999999984 45556666
No 169
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=324.73 Aligned_cols=195 Identities=25% Similarity=0.345 Sum_probs=161.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++..... ++.++||+|++.+++.+||+||+.|+.+......
T Consensus 30 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~ 106 (353)
T PRK10851 30 MVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRE 106 (353)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhccccc
Confidence 47999999999999999999999987 9999999998754322 4679999999999999999999999754210000
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
. . ...+.++.++++++.++|++..+ +.+..|||||||||+|||||
T Consensus 107 ~------~------------------------~~~~~~~~~~~~l~~~~L~~~~~-----~~~~~LSgGq~QRvalArAL 151 (353)
T PRK10851 107 R------P------------------------NAAAIKAKVTQLLEMVQLAHLAD-----RYPAQLSGGQKQRVALARAL 151 (353)
T ss_pred C------C------------------------CHHHHHHHHHHHHHHcCCchhhh-----CChhhCCHHHHHHHHHHHHH
Confidence 0 0 00112234677899999976544 55668999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++.++.+.|+++.+. .+.++++++|+..++..++|+|++|++|++++.|+++++.
T Consensus 152 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 152 AVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999997653 3566777999999999999999999999999999988874
No 170
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.3e-33 Score=300.56 Aligned_cols=186 Identities=29% Similarity=0.397 Sum_probs=156.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67888887653 2359999999999999999999999999999999999865 34799999998753
Q ss_pred cccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
....++.++|++|++.+++.+|++||+.+....+. .. ++.++++++.+|+.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22245678999999888888999999987543321 11 234788999999987666554 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
++||++|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 188 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL 188 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 99999999999999999999999999999999999998777999999999985
No 171
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-33 Score=275.83 Aligned_cols=191 Identities=23% Similarity=0.353 Sum_probs=162.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++++||||||||||||+++|..+|. .|.|.+||+++..... .-|.|+|++.++|.+||.||+.|+.++++.++
T Consensus 33 ~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k- 106 (259)
T COG4525 33 LVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVIDNVAFGLQLRGIEK- 106 (259)
T ss_pred EEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCCc--cceeEeccCccchhhHHHHHHHHHHHhcCCCH-
Confidence 36899999999999999999999997 9999999998865433 45899999999999999999999998877531
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
.+..+++.+.+..+||++..+.. +-.|||||||||.|||||+
T Consensus 107 ---------------------------------~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa 148 (259)
T COG4525 107 ---------------------------------AQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALA 148 (259)
T ss_pred ---------------------------------HHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhh
Confidence 12233467789999998877644 4579999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEec--CCcEEEecCcchHHHH
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DAQIVYQGPRELVLDF 236 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~--~G~v~~~G~~~~~~~~ 236 (1247)
.+|+.|+||||+++||+-+++++.+.|.++.+.. +..++.+||+.+|+.-+++++++|+ .|+|+..-+.+....|
T Consensus 149 ~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~t-gk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~df~rR~ 225 (259)
T COG4525 149 VEPQLLLLDEPFGALDALTREQMQELLLDLWQET-GKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLDFARRY 225 (259)
T ss_pred cCcceEeecCchhhHHHHHHHHHHHHHHHHHHHh-CCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCCHHHHh
Confidence 9999999999999999999999999999888764 5566679999999999999999997 5899987776654443
No 172
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=8.9e-33 Score=303.49 Aligned_cols=202 Identities=26% Similarity=0.403 Sum_probs=164.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 48899998876411 0013599999999999999999999999999999999998653 479999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000867 757 KQET------F-TRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1247)
Q Consensus 757 ~~~~------~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 829 (1247)
.... . ++.++|++|++.+++.+|+.||+.+....+ .......++++.++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 246899999999999999999998765432 1223344567889999999987766654 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++.. + +..|+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~ 215 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQL-A-ARCDR 215 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999998654 8999999999863 3 33555
No 173
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.7e-34 Score=349.04 Aligned_cols=192 Identities=27% Similarity=0.417 Sum_probs=155.1
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+||+|+||||||||+|+|+|++.|. +|+|.+||.|+.+.. .|+++|||+||+.+|. .||+|||.++..
T Consensus 502 vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~p----- 572 (709)
T COG2274 502 VAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGNP----- 572 (709)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCCC-----
Confidence 7999999999999999999999997 999999999986554 4689999999887665 599999998532
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
+.+.+...++|...+ ++ -....++.+.||.||+. +.+||||||||++||||
T Consensus 573 --------------------~~~~e~i~~A~~~ag------~~--~fI~~lP~gy~t~v~E~-G~~LSGGQrQrlalARa 623 (709)
T COG2274 573 --------------------EATDEEIIEAAQLAG------AH--EFIENLPMGYDTPVGEG-GANLSGGQRQRLALARA 623 (709)
T ss_pred --------------------CCCHHHHHHHHHHhC------cH--HHHHhcccccccccccC-CCCCCHHHHHHHHHHHH
Confidence 111122222222211 11 12345899999999965 55899999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|+||+||||||+||+.++..|.+.|.+... ++|+|+ ++|.. ...+.||+|++|++|+++++|+++++..
T Consensus 624 Ll~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~-IaHRl-~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 624 LLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVII-IAHRL-STIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred hccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEE-EEccc-hHhhhccEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999999999999998743 344444 56554 5788999999999999999999999875
No 174
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=8.3e-33 Score=307.32 Aligned_cols=199 Identities=24% Similarity=0.317 Sum_probs=162.3
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcCc
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 754 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~ 754 (1247)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235999999999999999999999999999999999976531 12799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccCC
Q 000867 755 PKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGLP 825 (1247)
Q Consensus 755 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~~ 825 (1247)
+... ...++.++|++|+..+++ .|++||+.+....+. ..+.++.++.++++++.+|+. +..+..+
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 142 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSA--- 142 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc---
Confidence 7642 133567999999998888 999999988654331 122344456688999999997 4444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 143 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~ 212 (247)
T TIGR00972 143 --LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDR 212 (247)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCE
Confidence 47999999999999999999999999999999999999999999999876 489999999986 45556676
No 175
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-33 Score=315.53 Aligned_cols=204 Identities=24% Similarity=0.321 Sum_probs=165.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++... ...+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+
T Consensus 20 ~~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~ 89 (320)
T PRK13631 20 IILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIY 89 (320)
T ss_pred ceEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEE
Confidence 3589999998874210 0124599999999999999999999999999999999998763 47999999977
Q ss_pred CCc-------------------ccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCC
Q 000867 756 KKQ-------------------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVEL 814 (1247)
Q Consensus 756 ~~~-------------------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l 814 (1247)
... ...++.+|||+|++ .+++ .||+||+.|..... ..+.++..+++.++++.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL 165 (320)
T PRK13631 90 IGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGL 165 (320)
T ss_pred cccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCC
Confidence 532 13456799999986 3555 59999998864321 22344445678899999999
Q ss_pred C-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHH
Q 000867 815 N-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 893 (1247)
Q Consensus 815 ~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~ 893 (1247)
. +..+..+ ..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+
T Consensus 166 ~~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~ 239 (320)
T PRK13631 166 DDSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HV 239 (320)
T ss_pred ChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HH
Confidence 6 4555443 479999999999999999999999999999999999999999999998777999999999986 35
Q ss_pred HHhhhc
Q 000867 894 FESFDE 899 (1247)
Q Consensus 894 ~~~fd~ 899 (1247)
.+..|+
T Consensus 240 ~~~adr 245 (320)
T PRK13631 240 LEVADE 245 (320)
T ss_pred HHhCCE
Confidence 556676
No 176
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.1e-33 Score=296.91 Aligned_cols=185 Identities=25% Similarity=0.355 Sum_probs=156.7
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNP--EKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeeEEECCCccc
Confidence 56788887653 24599999999999999999999999999999999998653 4799999998764
Q ss_pred c--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 758 Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 758 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
. ..+++.++|++|+..+++.+||+|++.+.... .. . +..++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 3 23456789999998888899999999876421 11 1 235788999999977666554 36999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
||++|||+++.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 188 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL 188 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch
Confidence 9999999999999999999999999999999999999998777999999999985
No 177
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=9.2e-33 Score=308.65 Aligned_cols=199 Identities=21% Similarity=0.268 Sum_probs=164.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 478999988763 24599999999999999999999999999999999998653 479999999865
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCcCHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHcCCCccc-
Q 000867 757 KQ----------------ETFTRISGYCEQNDIHSPFVTVYESLLYSAW-LRLPPEVDSETQKMFIEEIMELVELNPLR- 818 (1247)
Q Consensus 757 ~~----------------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-~~~~~~~~~~~~~~~v~~~l~~l~l~~~~- 818 (1247)
.. ..+++.++|++|++.+++.+|++||+.+... .. .......++++.++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1235678999999999999999999987542 21 123344456688999999997653
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhh
Q 000867 819 QSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFD 898 (1247)
Q Consensus 819 ~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd 898 (1247)
+..+ +.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++-+..|
T Consensus 147 ~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKYP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 4443 479999999999999999999999999999999999999999999998777999999999986 3444556
Q ss_pred c
Q 000867 899 E 899 (1247)
Q Consensus 899 ~ 899 (1247)
+
T Consensus 221 ~ 221 (257)
T PRK10619 221 H 221 (257)
T ss_pred E
Confidence 6
No 178
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=309.23 Aligned_cols=191 Identities=28% Similarity=0.364 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 104 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLRE 104 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhh
Confidence 47999999999999999999999987 999999998765421 246799999999899999999999886432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
... .. .++....++++++.+||.+..++ .+..|||||||||+
T Consensus 105 ~~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~ 146 (235)
T cd03261 105 HTR---LS------------------------------EEEIREIVLEKLEAVGLRGAEDL-----YPAELSGGMKKRVA 146 (235)
T ss_pred ccC---CC------------------------------HHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHH
Confidence 100 00 00112235667889999765544 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++..+||+|++|++|++++.|+++++
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999999999999987653 355677789999999999999999999999999987665
No 179
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-33 Score=325.46 Aligned_cols=191 Identities=21% Similarity=0.295 Sum_probs=161.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.+|||+|++.+|+.+||.||+.|+.+.++..
T Consensus 47 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 122 (377)
T PRK11607 47 IFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLP- 122 (377)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCC-
Confidence 47899999999999999999999987 999999999875432 3578999999999999999999999975432110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+.++.++++++.+||.+.. ++.+.+|||||||||+|||||
T Consensus 123 ---------------------------------~~~~~~~v~~~l~~l~L~~~~-----~~~~~~LSgGq~QRVaLARAL 164 (377)
T PRK11607 123 ---------------------------------KAEIASRVNEMLGLVHMQEFA-----KRKPHQLSGGQRQRVALARSL 164 (377)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhh-----cCChhhCCHHHHHHHHHHHHH
Confidence 011223467789999997544 455668999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++|||||||++||..++.++.+.++++.+.. +.+++.++|+..++..++|+|++|++|+++..|+++++.
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 99999999999999999999999999998876543 566777899999999999999999999999999988864
No 180
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-33 Score=317.93 Aligned_cols=196 Identities=28% Similarity=0.439 Sum_probs=162.6
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
+..++|+|+++++. +++++|+++||+|++||++||+|+|||||||++++|.+..+ .+|+|.|||.
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 45699999999875 23459999999999999999999999999999999998654 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~ 824 (1247)
++++ +..|+.+||||||..++. -||.+|+.|+. .+.+.++ |-++.+..|+.+ -.+|.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8754 567889999999998875 59999999863 2333333 455566666544 34555665
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
. +..|||||||||++|||++++|+|+++|||||.||++|..++++.+++. ..++|+|++.|+.+ +.+.||+
T Consensus 484 r-G~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~Dk 554 (591)
T KOG0057|consen 484 R-GLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDK 554 (591)
T ss_pred c-ccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCE
Confidence 4 3469999999999999999999999999999999999999999999984 45899999999874 6677887
No 181
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=311.74 Aligned_cols=202 Identities=25% Similarity=0.331 Sum_probs=164.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67899998874110 0123599999999999999999999999999999999998663 4899999998864
Q ss_pred c-------ccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000867 758 Q-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1247)
Q Consensus 758 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 827 (1247)
. ..+++.+||++|++ .+++ .||.|++.|..... ..+.++.++++.++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~----- 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSP----- 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCc-----
Confidence 1 13456799999986 4444 69999999875322 233455566788999999996 4555543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dr 213 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADY 213 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999998777999999999984 45566777
No 182
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-33 Score=296.37 Aligned_cols=183 Identities=30% Similarity=0.549 Sum_probs=153.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEcCcc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 755 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 755 (1247)
.++|+|+++.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999998632 13457999999999999999999999999999999999986522 458999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 756 KKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 756 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
... ...++.++|++|++.+++.+||+||+.+....+ .+.. ...||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567899999999999999999997753211 1222 2469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++++|||||+|||+.++..+.+.++++.++ +.|+|+++|+...++.+..|+
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~ 189 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDK 189 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCe
Confidence 999999999999999999999999999999999999999998765 678888888877777777776
No 183
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-33 Score=313.64 Aligned_cols=203 Identities=24% Similarity=0.303 Sum_probs=163.8
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++... .....+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 77899998874210 0123599999999999999999999999999999999998663 4799999986531
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q 000867 758 ---------------------------QETFTRISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIM 809 (1247)
Q Consensus 758 ---------------------------~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l 809 (1247)
....++.+|||+|++ ..+...||+|++.|..... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112356789999985 2334579999998865422 234455566789999
Q ss_pred HHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecc
Q 000867 810 ELVELN-PLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 888 (1247)
Q Consensus 810 ~~l~l~-~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 888 (1247)
+.+||. +..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 5666654 4799999999999999999999999999999999999999999999988779999999999
Q ss_pred CChHHHHhhhc
Q 000867 889 PSIDIFESFDE 899 (1247)
Q Consensus 889 ~~~~~~~~fd~ 899 (1247)
+. .+.+..|+
T Consensus 225 ~~-~~~~~adr 234 (305)
T PRK13651 225 LD-NVLEWTKR 234 (305)
T ss_pred HH-HHHHhCCE
Confidence 85 34566676
No 184
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-33 Score=312.63 Aligned_cols=201 Identities=24% Similarity=0.307 Sum_probs=166.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++.. +.+.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 47899999887411 123599999999999999999999999999999999998653 489999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.+++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567899999973 667789999998864322 2344455567899999999988777665 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + ...|+
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dr 209 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDR 209 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999998765 8999999999864 3 45676
No 185
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-33 Score=312.88 Aligned_cols=203 Identities=22% Similarity=0.337 Sum_probs=164.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..++ ..|+|.+||.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367899998874110 0124699999999999999999999999999999999998663 479999999876
Q ss_pred Cc-------ccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCC
Q 000867 757 KQ-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPG 826 (1247)
Q Consensus 757 ~~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 826 (1247)
.. ...++.+|||+|++ .+++ .||.||+.|..... ..+.++.++++.++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 143 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSP---- 143 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 42 13456799999986 3444 59999998864322 233445556788999999996 5666554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +|+|||+++|++. ++.+..|+
T Consensus 144 -~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dr 215 (286)
T PRK13646 144 -FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADE 215 (286)
T ss_pred -ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 47999999999999999999999999999999999999999999999875 4899999999986 35566776
No 186
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.4e-33 Score=320.77 Aligned_cols=191 Identities=26% Similarity=0.357 Sum_probs=160.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.+||++|++.+++.+||+||+.+.....+..
T Consensus 69 i~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 145 (340)
T PRK13536 69 CFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMS 145 (340)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999987532 23467999999999999999999998754332100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
. .+....++++++.++|++..++.+ ++||||||||++||+|
T Consensus 146 ----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 146 ----------T------------------------REIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARA 186 (340)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHH
Confidence 0 001123456788899987766655 4799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|++++|||||+|||+.++.++++.++++.+ .+++|++++|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999854 35677778999999999999999999999999999988764
No 187
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.5e-33 Score=306.64 Aligned_cols=203 Identities=23% Similarity=0.257 Sum_probs=159.6
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5778877663 235999999999999999999999999999999999974111357999999987643
Q ss_pred c---cc-cceEEEeccCCCCCCCcCHHHHHHHHhhccCCC----CCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCC
Q 000867 759 E---TF-TRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESG 829 (1247)
Q Consensus 759 ~---~~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~ 829 (1247)
. .. +..++|++|++.+++.+|++|++.+........ ..+.+..+++++++++.+||. +..+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 11 234799999999999999999998764322110 112233345678899999997 34555432 24
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHh-hhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES-FDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-fd~ 899 (1247)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++. +... .|+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~-~~~~~~d~ 214 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRL-LNYIKPDY 214 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHH-HHhhcCCe
Confidence 99999999999999999999999999999999999999999999987778999999999853 3333 355
No 188
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-33 Score=311.50 Aligned_cols=200 Identities=27% Similarity=0.303 Sum_probs=166.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 4789999887631 124599999999999999999999999999999999998763 489999999886
Q ss_pred Ccc---cccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQE---TFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~~---~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
... ..++.+||++|++. .++..||.||+.+..... ....++.+++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 532 33567899999973 666789999998865432 1233444567889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + ...|+
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~ 209 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADR 209 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCE
Confidence 9999999999999999999999999999999999999999998865 8999999999864 3 34676
No 189
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=288.42 Aligned_cols=191 Identities=23% Similarity=0.350 Sum_probs=155.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||+||||||++|+|..++. +|+|.++|++++.... ++-++||||....|+.+||+|||..++....
T Consensus 31 iv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~ 107 (237)
T COG0410 31 IVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARR 107 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhccc
Confidence 58999999999999999999999976 9999999999976543 3579999999999999999999998764321
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhC-CcccccccccCCccccccccccchhHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLG-LEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
. ++.. + ...+++.+.+- |.+-. ++...+|||||||-++|
T Consensus 108 ~-~~~~------~----------------------------~~~e~v~~lFP~Lker~-----~~~aG~LSGGEQQMLAi 147 (237)
T COG0410 108 D-KEAQ------E----------------------------RDLEEVYELFPRLKERR-----NQRAGTLSGGEQQMLAI 147 (237)
T ss_pred c-cccc------c----------------------------ccHHHHHHHChhHHHHh-----cCcccCCChHHHHHHHH
Confidence 1 0000 0 00122222221 22112 24455799999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||||+++|++|+|||||.||-|.-..+|.+.++++.+. .+.+|+.+.|+...+.+++||.++|++|++++.|+.+++.+
T Consensus 148 aRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 148 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred HHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998764 45788889999999999999999999999999999988763
No 190
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=305.44 Aligned_cols=198 Identities=24% Similarity=0.328 Sum_probs=163.0
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecc
Confidence 67888887763 23599999999999999999999999999999999998653 4799999998752
Q ss_pred c---------ccccceEEEeccCCCCCCCcCHHHHHHHH-hhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 758 Q---------ETFTRISGYCEQNDIHSPFVTVYESLLYS-AWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 758 ~---------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~-~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
. ...++.++|++|++.+++.+|+.||+.+. .... ....++..+++.++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 0 12345689999999999999999999643 2221 1223334456788999999987777665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.++|+|+|+++|++. ++-+..|+
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~ 210 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASR 210 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 469999999999999999999999999999999999999999999998767899999999986 34445565
No 191
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-33 Score=310.50 Aligned_cols=198 Identities=22% Similarity=0.293 Sum_probs=163.8
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECC
Confidence 56788887653 123599999999999999999999999999999999998653 4799999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 758 Q----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 758 ~----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
. ...++.+||++|++. .+...|+.||+.+..... ..+....++.++++++.+||.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 3 233567899999975 356689999998765332 2234444566889999999988777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++.. + ...|+
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~-~-~~~d~ 204 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEE-L-HDADR 204 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-H-hhCCE
Confidence 99999999999999999999999999999999999999999987779999999999874 3 44666
No 192
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=320.66 Aligned_cols=187 Identities=23% Similarity=0.270 Sum_probs=159.7
Q ss_pred ccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCCC
Q 000867 702 KLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FTRISGYCEQNDIH 774 (1247)
Q Consensus 702 ~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~~~v~q~~~~ 774 (1247)
...+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... . .++.+||++|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 34689999999999999999999999999999999998763 479999999886431 1 23568999999999
Q ss_pred CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000867 775 SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMD 854 (1247)
Q Consensus 775 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lD 854 (1247)
++.+||+||+.+....+. ...++.+++++++++.+||.+..++.+ +.||||||||++|||||+.+|++|+||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765431 233444567889999999988777765 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 855 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 855 EptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.++.|+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dr 234 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDR 234 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCE
Confidence 99999999999999999999865 4899999999986 45666777
No 193
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-32 Score=298.00 Aligned_cols=188 Identities=24% Similarity=0.307 Sum_probs=159.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++++++ ++.+++|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 588999987653 23599999999999999999999999999999999998653 479999999876
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
.....++.++|++|++.+++.+|++|++.+....+. .. .++.++++++.+++.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999987654321 11 2234678899999987777665 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
|++|||+++.+|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 198 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY 198 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh
Confidence 999999999999999999999999999999999999998878899999999985
No 194
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=311.09 Aligned_cols=201 Identities=25% Similarity=0.382 Sum_probs=165.9
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~ 69 (283)
T PRK13636 4 YILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKP 69 (283)
T ss_pred ceEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEE
Confidence 3588999998773 124599999999999999999999999999999999998653 48999999988
Q ss_pred CCc-----ccccceEEEeccCCCC-CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000867 756 KKQ-----ETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1247)
Q Consensus 756 ~~~-----~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 829 (1247)
... ..+++.+||++|++.. +...|++||+.+..... ..+.+..+++++++++.+||.+..++.+ +.
T Consensus 70 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 141 (283)
T PRK13636 70 IDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HC 141 (283)
T ss_pred CCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----cc
Confidence 631 2345679999999742 34579999998764322 2234444567889999999988777765 46
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. +.+..|+
T Consensus 142 LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~-~~~~~dr 211 (283)
T PRK13636 142 LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDI-VPLYCDN 211 (283)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHHhCCE
Confidence 9999999999999999999999999999999999999999999998765 8999999999864 4456676
No 195
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=305.54 Aligned_cols=202 Identities=23% Similarity=0.260 Sum_probs=163.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 377888887763 235999999999999999999999999999999999976421 3589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc----ccccccCCC
Q 000867 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVGLPG 826 (1247)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~~g~~~ 826 (1247)
.++.. ..+++.+||++|++.+++.+||+||+.+....+.. ....++.++.++++++.+||.+. .++.
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----- 143 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP----- 143 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----
Confidence 87642 23456789999999888899999999886533211 11223344568889999998642 3333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ |+|+|+++|++. .+.+..|+
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 214 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDY 214 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCE
Confidence 357999999999999999999999999999999999999999999999854 799999999986 45556676
No 196
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-33 Score=321.94 Aligned_cols=190 Identities=27% Similarity=0.477 Sum_probs=160.5
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
+..++.+|+++.++ +++++++|+|++++||+++||+|+||||||||+++|+|..++ .+|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng~ 383 (559)
T COG4988 318 PIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNGI 383 (559)
T ss_pred CceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCc
Confidence 45677779998874 234799999999999999999999999999999999998764 5899999998
Q ss_pred cCC---cccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccc------ccccCC
Q 000867 755 PKK---QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ------SLVGLP 825 (1247)
Q Consensus 755 ~~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~------~~~g~~ 825 (1247)
+.. ...+++.++||+|++.+++ -|++||+.++. + +.+ ++.+.++++..||.+..+ +.+| +
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ig-e 452 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIG-E 452 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhc-c
Confidence 764 4568899999999998887 59999998752 1 222 334677888888876554 3444 3
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
++++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++.
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~ 516 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE 516 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH
Confidence 5678999999999999999999999999999999999999999999999886 599999999985
No 197
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-33 Score=304.85 Aligned_cols=197 Identities=23% Similarity=0.352 Sum_probs=161.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 478899988763 23599999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCC
Q 000867 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELV-ELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lS 831 (1247)
... ..++.++|++|+..+++.+||.||+.+..... ..+..++.++++++.+ ++.+..+... +.||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCC
Confidence 432 13456999999999999999999998754221 1122234566777777 4665555443 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADR 206 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCE
Confidence 99999999999999999999999999999999999999999998777999999999985 45566666
No 198
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=324.49 Aligned_cols=191 Identities=25% Similarity=0.367 Sum_probs=159.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.|+.+..+..
T Consensus 31 ~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~- 106 (369)
T PRK11000 31 FVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAK- 106 (369)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999987 999999998875432 2467999999999999999999999875432110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+.+..++++++.+||.+..+ +.+.+|||||||||+|||||
T Consensus 107 ---------------------------------~~~~~~~~~~~l~~lgL~~~~~-----~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 107 ---------------------------------KEEINQRVNQVAEVLQLAHLLD-----RKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhhhc-----CChhhCCHHHHHHHHHHHHH
Confidence 0011224567889999976554 44567999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|+++||||||+|||+.++.++.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+++..|+++++.
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999876533 556777899999999999999999999999999988764
No 199
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-32 Score=298.81 Aligned_cols=181 Identities=27% Similarity=0.338 Sum_probs=151.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCcCHHHHHHH
Q 000867 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFTRISGYCEQNDIHSPFVTVYESLLY 786 (1247)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~ 786 (1247)
|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 99999999999999999999999999999998753 479999999876432 234578999999999999999999987
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 000867 787 SAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 866 (1247)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~ 866 (1247)
....+. .. .+..+++++++++.+|+.+..++.+ ..||||||||++|||||+.+|++++|||||+|||..++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1233456789999999987777665 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 867 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 867 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 198 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQR 198 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCE
Confidence 999999998754 899999999985 34445565
No 200
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=305.53 Aligned_cols=200 Identities=23% Similarity=0.276 Sum_probs=160.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988763 235999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++ +||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 234567999999988875 899999988653321 112333455678889998874 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ .+.+..|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~ 218 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDR 218 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCE
Confidence 35799999999999999999999999999999999999999999999985 4799999999986 34455666
No 201
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=305.87 Aligned_cols=202 Identities=23% Similarity=0.251 Sum_probs=162.8
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899988763 235999999999999999999999999999999999986532 2489999999
Q ss_pred ccCC--c---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKK--Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~--~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++. . ..+++.++|++|++.+++.+|+.||+.+....+. .....+..++.++++++.+|+.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG-LVKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcC-ccCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8764 1 2345678999999999999999999987654321 11123334456788999999853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 217 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDY 217 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCE
Confidence 357999999999999999999999999999999999999999999999865 699999999986 35556676
No 202
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.5e-33 Score=345.28 Aligned_cols=189 Identities=27% Similarity=0.417 Sum_probs=157.8
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
...++++|++++++. ++++|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.
T Consensus 332 ~~~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p--~~G~I~i~g~ 397 (529)
T TIGR02868 332 KPTLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDP--LQGEVTLDGV 397 (529)
T ss_pred CceEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCE
Confidence 346999999998841 23599999999999999999999999999999999998763 4899999998
Q ss_pred cCCc--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 755 PKKQ--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 755 ~~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
++.+ ..+++.++||+|++.+++ -|++||+.++. + +.+ +++++++++..++.+. .|+.+|..
T Consensus 398 ~i~~~~~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 467 (529)
T TIGR02868 398 SVSSLQDELRRRISVFAQDAHLFD-TTVRDNLRLGR----P-DAT----DEELWAALERVGLADWLRSLPDGLDTVLGEG 467 (529)
T ss_pred EhhhHHHHHHhheEEEccCccccc-ccHHHHHhccC----C-CCC----HHHHHHHHHHcCCHHHHHhCcccccchhccc
Confidence 7653 445678999999999886 49999998752 1 222 2346677887777543 36777753
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 889 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~ 889 (1247)
+.+||||||||++|||||+++|+||+||||||+||++++..|++.+++.. +++|+|+++|++
T Consensus 468 -G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 468 -GARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 45799999999999999999999999999999999999999999999763 579999999985
No 203
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-32 Score=305.89 Aligned_cols=199 Identities=24% Similarity=0.303 Sum_probs=163.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35788887763 23599999999999999999999999999999999998653 4899999998763
Q ss_pred c----------------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccccc
Q 000867 758 Q----------------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSL 821 (1247)
Q Consensus 758 ~----------------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~ 821 (1247)
. ...++.++|++|++.+++..|+.||+.+..... ........++.++++++.+|+.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567899999999999999999998753211 1123344455688999999998776665
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 822 ~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
. +.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|+|+++|++. ++.+..|+
T Consensus 144 ~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~ 216 (252)
T TIGR03005 144 P-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADR 216 (252)
T ss_pred h-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCE
Confidence 4 469999999999999999999999999999999999999999999998764 899999999986 35556666
No 204
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=308.77 Aligned_cols=201 Identities=24% Similarity=0.303 Sum_probs=165.1
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~ 72 (271)
T PRK13632 6 VMIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGIT 72 (271)
T ss_pred eEEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 35889999887631 124699999999999999999999999999999999998653 47999999988
Q ss_pred CCc---ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 756 KKQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
+.. ..+++.++|++|++. .++.+|++||+.+..... ....+..+++++++++.+||.+..++.+ +.||
T Consensus 73 i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 144 (271)
T PRK13632 73 ISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLS 144 (271)
T ss_pred cCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCC
Confidence 643 234567899999974 567789999998764322 1233444556889999999988777765 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ ++|||+++|++.. + ...|+
T Consensus 145 ~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~ 211 (271)
T PRK13632 145 GGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADK 211 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCE
Confidence 99999999999999999999999999999999999999999998765 5899999999864 2 34565
No 205
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-32 Score=310.71 Aligned_cols=204 Identities=25% Similarity=0.307 Sum_probs=163.8
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367889888764110 0124699999999999999999999999999999999998763 489999999876
Q ss_pred Cc-------ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000867 757 KQ-------ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1247)
Q Consensus 757 ~~-------~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 827 (1247)
.. ...++.+||++|++. .+..+||.||+.|..... ....+..+++++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 123457899999963 233579999998765332 223444556788999999997 5666665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++. .+.+..|+
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~ 214 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADD 214 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998777999999999985 35556666
No 206
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.8e-32 Score=303.89 Aligned_cols=200 Identities=26% Similarity=0.300 Sum_probs=162.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 67888887653 23599999999999999999999999999999999998653 4799999998764
Q ss_pred cc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.. ..++.++|++|++.+++.+||+||+.+....... .....+..+++++++++.+|+.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 31 1234689999999999999999999876432100 00112334456889999999987776665 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 211 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADK 211 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCE
Confidence 6999999999999999999999999999999999999999999999865 789999999986 35556666
No 207
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-32 Score=306.33 Aligned_cols=198 Identities=25% Similarity=0.352 Sum_probs=162.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67888887763 2359999999999999999999999999999999999865 34799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+|+.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223456899999998888899999998754221 1112233456788999999987777765 4699999
Q ss_pred HHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~------~~p~il~lDEptsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+||+ .+|++|+|||||+|||+.++..+.+.|+++. ++|+|||+++|++. .+.+..|+
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 210 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADR 210 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCE
Confidence 99999999999 5999999999999999999999999999987 56899999999985 34456666
No 208
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-33 Score=323.74 Aligned_cols=192 Identities=25% Similarity=0.378 Sum_probs=151.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---cccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.|||+|+||||||||+++|+|+.+|+ +|+|.+||.+.++. .++++++||+|++.+++. |+||||.++..-..
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~~~~s- 423 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLARPDAS- 423 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccCCcCC-
Confidence 48999999999999999999999987 99999999887654 467899999999887765 99999998632100
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
..++....+. ..+.+.+.-+.+.||.+|+ ++++|||||+|||++||
T Consensus 424 ------~e~i~~al~~---------------------------a~l~~~v~~p~GLdt~ige-~G~~LSgGQ~QRlaLAR 469 (559)
T COG4988 424 ------DEEIIAALDQ---------------------------AGLLEFVPKPDGLDTVIGE-GGAGLSGGQAQRLALAR 469 (559)
T ss_pred ------HHHHHHHHHH---------------------------hcHHHhhcCCCcccchhcc-CCCCCCHHHHHHHHHHH
Confidence 0000000000 0112223335678999996 56689999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||+++++++++||||++||.++++.|.+.+.++++ + +++++++|.. +....+|+|++|++|++++.|.++++.+
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~-ktvl~itHrl-~~~~~~D~I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--Q-KTVLVITHRL-EDAADADRIVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--C-CeEEEEEcCh-HHHhcCCEEEEecCCceeccCCHHHHhh
Confidence 99999999999999999999999999999999765 3 4555577765 4556679999999999999999998853
No 209
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-33 Score=287.21 Aligned_cols=191 Identities=28% Similarity=0.385 Sum_probs=163.6
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FTRISGYCEQNDIHSP 776 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~~~v~q~~~~~~ 776 (1247)
+...+++|||+++++||++||+||||||||||+|+|+|..++ ..|+|.++|.++.... .+.-++.-+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 456799999999999999999999999999999999998764 4799999999876432 2334678899999999
Q ss_pred CcCHHHHHHHHhhcc--------CCCC-CCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000867 777 FVTVYESLLYSAWLR--------LPPE-VDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVAN 847 (1247)
Q Consensus 777 ~ltv~e~l~~~~~~~--------~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~ 847 (1247)
.|||.||+..++..+ .+.. ...++..++..++|+.+||.+.+|...| +||+||+|||.|||||+++
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 999999998775433 1111 1234456678899999999999999976 5999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 848 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 848 p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|+||||.+||.+....++.+.|+++.++ |.||+++-|+.+. ++.+-|+
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dr 219 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADR 219 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccE
Confidence 9999999999999999999999999999874 6999999999874 6777777
No 210
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=305.29 Aligned_cols=200 Identities=25% Similarity=0.301 Sum_probs=161.2
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~ 752 (1247)
..++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+.. +.+|+|.++
T Consensus 11 ~~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~ 77 (258)
T PRK14268 11 PQIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIE 77 (258)
T ss_pred eeEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEEC
Confidence 3588999987653 235999999999999999999999999999999999976421 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g 823 (1247)
|.++.. ..+++.++|++|++.+++ +|++||+.+....+ ..+.+..+++++++++.+++.+ ..++.
T Consensus 78 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 151 (258)
T PRK14268 78 GEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP-- 151 (258)
T ss_pred CEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC--
Confidence 987532 124567999999988888 89999998865432 1233344456788999998842 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++.. +.+..|+
T Consensus 152 ---~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~~-~~~~~d~ 222 (258)
T PRK14268 152 ---ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQQ-AARISDY 222 (258)
T ss_pred ---hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHHH-HHHhCCE
Confidence 347999999999999999999999999999999999999999999999864 7999999999853 4444565
No 211
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-32 Score=306.15 Aligned_cols=202 Identities=23% Similarity=0.246 Sum_probs=163.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 478899987763 2459999999999999999999999999999999999865 3489999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCcCHHHHHHHHhhccCC----------C--CCCHHHHHHHHHHHHHHcCCCccccc
Q 000867 757 KQE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP----------P--EVDSETQKMFIEEIMELVELNPLRQS 820 (1247)
Q Consensus 757 ~~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~ 820 (1247)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+|+.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233478999999999999999999875421110 0 00112233467888999999877666
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 821 ~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+ +.||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 65 469999999999999999999999999999999999999999999998765 899999999986 44555666
No 212
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=291.43 Aligned_cols=176 Identities=59% Similarity=0.918 Sum_probs=149.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47889998877421 012469999999999999999999999999999999999643223589999999876
Q ss_pred CcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
. ...++.++|++|++.+++.+|++||+.+...+ + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 5 34456789999999899999999999864210 0 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|||||+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++.++.+..|+
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~ 178 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDR 178 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCE
Confidence 999999999999999999999999999999999999998777899999999997656677776
No 213
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2e-32 Score=299.46 Aligned_cols=192 Identities=24% Similarity=0.337 Sum_probs=160.4
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4677776553 2459999999999999999999999999999999999865 348999999987653
Q ss_pred ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000867 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1247)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~ 838 (1247)
.. .+.++|++|++.+++.+|++||+.+....+. .. ++++.++++.+|+.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 32 2468999999998888999999987654331 11 234678899999988777654 46999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 839 ~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+||||++.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~ 193 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADH 193 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999998777899999999986 35555666
No 214
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=306.60 Aligned_cols=201 Identities=26% Similarity=0.344 Sum_probs=163.6
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67888887653 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
. ...++.++|++|+..+++.+|+.|++.+....... .....+..+++++++++.+|+.+..++.+ +.||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 23345689999999888889999999875311000 01111223456788999999987777664 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~ 207 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDH 207 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998777899999999986 45566676
No 215
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-32 Score=307.10 Aligned_cols=203 Identities=27% Similarity=0.365 Sum_probs=165.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 10 ~~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~ 74 (265)
T PRK10575 10 TTFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQP 74 (265)
T ss_pred ceEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEe
Confidence 3588999987763 2359999999999999999999999999999999999865 347999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
+.. ..+++.++|++|+..+++.+|+.||+.+....... ........+++++++++.+++.+..++.+ +.||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 149 (265)
T PRK10575 75 LESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLS 149 (265)
T ss_pred hhhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCC
Confidence 532 23345789999998888889999999875321110 00111223456788999999987767665 3699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 150 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~ 217 (265)
T PRK10575 150 GGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDY 217 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998764 899999999986 45566676
No 216
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.8e-32 Score=290.62 Aligned_cols=177 Identities=50% Similarity=0.835 Sum_probs=151.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCeEEEEEEEcCc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 754 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~--~~~~~~G~i~i~g~ 754 (1247)
.++++|+++.++... ...++.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 578999988774210 001246999999999999999999999999999999999986 5 45899999999
Q ss_pred cCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 755 PKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 755 ~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8765445677999999999889999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++|||||+.+|++++|||||+|||..++..+.+.|+++.++|+|+|+++|++..++.+..|+
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~ 181 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDK 181 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCE
Confidence 99999999999999999999999999999999999999998767999999999998777777787
No 217
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.6e-32 Score=312.75 Aligned_cols=215 Identities=20% Similarity=0.219 Sum_probs=168.5
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
.-++++|++++++............+...+++|||++|++||++||+|+||||||||+++|+|..+. .+|+|.++|.+
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~ 84 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKD 84 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEE
Confidence 3588999998775321000000001235699999999999999999999999999999999998763 47999999988
Q ss_pred CCcc------cccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCC
Q 000867 756 KKQE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPG 826 (1247)
Q Consensus 756 ~~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 826 (1247)
+... .+++.++||+|++ .++|.+|+.|++.+......+ ..+.++.++++.++++.+||. +..++..
T Consensus 85 i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~p---- 159 (331)
T PRK15079 85 LLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRYP---- 159 (331)
T ss_pred CCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCCc----
Confidence 6431 2356799999997 578899999999876443211 234455566788999999994 3445543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|+|++||++. .+.+..|+
T Consensus 160 -~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dr 231 (331)
T PRK15079 160 -HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDR 231 (331)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999998764 899999999985 34445566
No 218
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.5e-33 Score=282.49 Aligned_cols=187 Identities=24% Similarity=0.371 Sum_probs=169.4
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCH
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
+++.+++|+||.++||+++|++|||||||||++++|.|...+ .+|+|.++|.+.+... +.++||.|.+--++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhhhh-hhhcccChhhhccCccCcH
Confidence 457899999999999999999999999999999999998763 5899999999987643 4568999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgL 860 (1247)
.|.|.|-|.++ .++.++.++.++.+|+.+++.......+ +.||.|++|++.+-.+++++|++++||||+|||
T Consensus 90 ~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 99999999887 4566777788999999999998887776 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 861 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 861 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||.+.+.+-+.+.++.++|.|||+++|+.. .+-++.|+
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~ 199 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDR 199 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhh
Confidence 999999999999999999999999999985 45667777
No 219
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.9e-32 Score=297.40 Aligned_cols=202 Identities=23% Similarity=0.341 Sum_probs=165.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+... .+.+.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5688888765310 112569999999999999999999999999999999999765 34899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 QE------TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. ..++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.+|+.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999999998999999988654321 1233444567889999999987776664 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +++|||+++|+++ +.+..|+
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~ 210 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADR 210 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCE
Confidence 9999999999999999999999999999999999999999999875 4899999999985 3455665
No 220
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=307.34 Aligned_cols=199 Identities=25% Similarity=0.343 Sum_probs=164.4
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ +++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67889888763 12359999999999999999999999999999999999865 34899999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 758 Q---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 758 ~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
. ...++.++|++|++. .+...||.||+.+..... ..+.+..+++++++++.+||.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999974 234579999998765322 2334445567889999999988777765 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~dr 207 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADY 207 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998765 899999999986 45566676
No 221
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-33 Score=319.88 Aligned_cols=191 Identities=23% Similarity=0.327 Sum_probs=159.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 33 i~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~ 109 (343)
T PRK11153 33 IFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLEL 109 (343)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999998875432 146799999999999999999999987543
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. . .+.+..++++++.+||++..+. .+..|||||||||+
T Consensus 110 ~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~-----~~~~LSgGq~qRv~ 150 (343)
T PRK11153 110 AGTP----------K------------------------AEIKARVTELLELVGLSDKADR-----YPAQLSGGQKQRVA 150 (343)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhC-----ChhhCCHHHHHHHH
Confidence 2110 0 0111235678899999765544 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||+|++|++|++++.|+.+++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998653 3566777899999999999999999999999999987764
No 222
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-32 Score=304.11 Aligned_cols=201 Identities=20% Similarity=0.266 Sum_probs=162.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377899988763 235999999999999999999999999999999999976421 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++.+||+||+.+....+. ..+.+..++.++++++.+|+.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87631 2345678999999999999999999987654321 1123344556788999999842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++ +++|||+++|++. ++.+..|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tviivsH~~~-~~~~~~d~ 216 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK-QDYTIVIVTHNMQ-QAARVSDQ 216 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhCCE
Confidence 35799999999999999999999999999999999999999999999985 4689999999986 34555666
No 223
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-32 Score=308.75 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=161.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67889988764110 0113599999999999999999999999999999999998653 4899999998764
Q ss_pred c-------ccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000867 758 Q-------ETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGE 827 (1247)
Q Consensus 758 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 827 (1247)
. ...++.++|++|++ .+++ .|++||+.+..... ..+.+..++.++++++.+||.+ ..+..+
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP----- 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc-----
Confidence 2 12356789999996 3444 69999998764322 1233444556788999999963 445544
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~ 214 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADF 214 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998777899999999985 44455666
No 224
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-33 Score=302.10 Aligned_cols=189 Identities=30% Similarity=0.364 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 104 (220)
T cd03265 28 IFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVP 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999876432 22357999999998899999999999864322100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
.++....++++++.+||++..++. +..||||||||++||||
T Consensus 105 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr~~la~a 145 (220)
T cd03265 105 ----------------------------------GAERRERIDELLDFVGLLEAADRL-----VKTYSGGMRRRLEIARS 145 (220)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCHHHhhCC-----hhhCCHHHHHHHHHHHH
Confidence 001122356789999997655544 45799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
++.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++...+|++++|++|++++.|++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEE 218 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHH
Confidence 99999999999999999999999999999987653 25567778999999999999999999999999987654
No 225
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.2e-32 Score=301.16 Aligned_cols=188 Identities=29% Similarity=0.383 Sum_probs=155.9
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFTRISGYCE-QNDIHSPF 777 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~-q~~~~~~~ 777 (1247)
+.+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 345799999999999999999999999999999999998653 47999999986432 23456789997 55677788
Q ss_pred cCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000867 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEpt 857 (1247)
+|++|++.+....+ ....++..+.++++++.+|+.+..++.+ +.||||||||++||++|+.+|++++|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765433 1223344456788999999988777765 369999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 858 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|||+.++..+.+.|++++++ ++|||+++|++. ++-+..|+
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~ 223 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARR 223 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999998754 799999999986 44555665
No 226
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-32 Score=282.21 Aligned_cols=197 Identities=28% Similarity=0.393 Sum_probs=159.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|++..|. +.++|++||+++++||+++|+|||||||||||++|+|..+. .+|+|.++|.++.
T Consensus 4 L~v~~l~~~YG-------------~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGYG-------------KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeeccc-------------ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 66788876653 45799999999999999999999999999999999998763 4799999999976
Q ss_pred cc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCH
Q 000867 758 QE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVE-LNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 758 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ..++-++||||....||.|||+|||..++..+.. ++..+..++++.+.+= |.+..+...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3355689999999999999999999987654422 1111222667777763 5666666655 5999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+|-++|||||+.+|++|+|||||.||-|.-..+|.+.|+++.++ |.||+.+-+.-. ...+.-|+
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr 206 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADR 206 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCE
Confidence 9999999999999999999999999999999999999999999866 668888776543 34455565
No 227
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-32 Score=302.73 Aligned_cols=206 Identities=23% Similarity=0.319 Sum_probs=161.7
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC---CCeEEEEEEE
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITI 751 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~---~~~~~G~i~i 751 (1247)
|..++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... ..+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34689999998763 1359999999999999999999999999999999999642 1134799999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000867 752 SGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1247)
Q Consensus 752 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 826 (1247)
+|.++.. ...++.++|++|++.+++ .||+||+.+....+. ....+..+++++++++.+|+.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987642 123567999999998887 599999988654321 11223334567888999998542111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+..|+
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~ 217 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDV 217 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCE
Confidence 35799999999999999999999999999999999999999999999985 4799999999986 34455666
No 228
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=304.18 Aligned_cols=204 Identities=20% Similarity=0.268 Sum_probs=163.5
Q ss_pred CCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeEEEEE
Q 000867 673 FEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNI 749 (1247)
Q Consensus 673 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~-~~~~G~i 749 (1247)
.....++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|
T Consensus 9 ~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i 75 (260)
T PRK10744 9 TAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI 75 (260)
T ss_pred CCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE
Confidence 3456789999998763 1359999999999999999999999999999999999753 1 1357999
Q ss_pred EEcCccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccc
Q 000867 750 TISGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQS 820 (1247)
Q Consensus 750 ~i~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~ 820 (1247)
.++|.++.. ...++.++|++|+..+++ .|++||+.+...... ..+.+..+++++++++.+++.+ ..+.
T Consensus 76 ~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 76 LLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred EECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 999987632 134567999999988887 899999987653221 1233444566889999999843 2333
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 821 ~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
. ...||||||||++|||||+.+|++|+|||||+|||..++..+.+.|+++. ++.|||+++|++. .+.+..|+
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~ 224 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDY 224 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 3 35799999999999999999999999999999999999999999999985 4789999999985 34455666
No 229
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-33 Score=300.07 Aligned_cols=185 Identities=26% Similarity=0.385 Sum_probs=151.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~-- 102 (213)
T cd03259 28 FLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGV-- 102 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCC--
Confidence 47999999999999999999999887 999999998775322 245799999998888899999999886432110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
. . .+.+..++++++.+||.+..+. .+..||||||||++|||||
T Consensus 103 --~------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~la~al 145 (213)
T cd03259 103 --P------K------------------------AEIRARVRELLELVGLEGLLNR-----YPHELSGGQQQRVALARAL 145 (213)
T ss_pred --C------H------------------------HHHHHHHHHHHHHcCChhhhhc-----ChhhCCHHHHHHHHHHHHH
Confidence 0 0 0011235667888999765444 3457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
+.+|++++|||||+|||+.++..+.+.++++++. .+++|++++|+.+++.++||++++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987653 3566777899999999999999999999998765
No 230
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=306.82 Aligned_cols=198 Identities=24% Similarity=0.347 Sum_probs=161.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 56788887763 23599999999999999999999999999999999998653 4899999998763
Q ss_pred c-----ccccceEEEeccCCCC-CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 Q-----ETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
. ...++.++|++|++.. ....|+.||+.+....+ ....+..++.++++++.+|+.+..++.+ +.||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234578999999753 34468999998764332 1233344456788999999988777654 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~ 205 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDA 205 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998767899999999986 34455666
No 231
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.6e-32 Score=304.89 Aligned_cols=208 Identities=25% Similarity=0.305 Sum_probs=162.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++.....+ ..+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 67888888764110000 00135699999999999999999999999999999999998653 4799999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000867 758 QE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 828 (1247)
.. ..++.++|++|++ .+.+.+||+|++.+...... ....+..+++++++++.+|+. +..+..+ +
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 31 1345689999996 46678999999976543111 122333455688999999995 5555554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+..|+
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~ 220 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQR 220 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcE
Confidence 69999999999999999999999999999999999999999999998765 899999999986 34455666
No 232
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3e-32 Score=295.69 Aligned_cols=195 Identities=25% Similarity=0.319 Sum_probs=159.5
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ .+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 64 (213)
T TIGR01277 2 ALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTG 64 (213)
T ss_pred eEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEccc
Confidence 4677776652 146799999999999999999999999999999998763 47999999987643
Q ss_pred -ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 759 -ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 759 -~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
...++.++|++|++.+++.+|+.||+.+...... ... ...+++++++++.+|+.+..++.+ +.||||||||
T Consensus 65 ~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (213)
T TIGR01277 65 LAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQR 136 (213)
T ss_pred CChhccceEEEeccCccCCCCcHHHHHHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHH
Confidence 2345679999999999999999999976542211 111 223456788999999987777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++|||+|+.+|++++|||||+|||..++..+.+.|+++.++ |+|||+++|++. ++-+..|+
T Consensus 137 l~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~ 198 (213)
T TIGR01277 137 VALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQ 198 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCe
Confidence 99999999999999999999999999999999999998754 899999999986 34455666
No 233
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2e-32 Score=300.26 Aligned_cols=183 Identities=25% Similarity=0.361 Sum_probs=152.6
Q ss_pred eeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCHHHHHH
Q 000867 706 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLL 785 (1247)
Q Consensus 706 L~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~ 785 (1247)
|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5799999999999999999999999999999998653 4899999998765322 12489999999999999999998
Q ss_pred HHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000867 786 YSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 865 (1247)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~ 865 (1247)
+......+ ....+..+++++++++.+|+.+..++.+ +.||||||||++|||+|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2233444556788999999987777665 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 866 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 866 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 184 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDR 184 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999998764 899999999986 45566776
No 234
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-32 Score=298.02 Aligned_cols=197 Identities=27% Similarity=0.398 Sum_probs=164.6
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
.++|+++.+. .+.+++|+|++++|||+++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5778877653 23599999999999999999999999999999999998763 47999999987653
Q ss_pred c-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
. ..++.++|++|++.+++.+|++||+.+....+ ..+....++.++++++.+|+.+..++.+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 12457899999999988899999998765433 1223344556788999999988777665 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~ 200 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDR 200 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999998764 899999999985 35566676
No 235
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.8e-32 Score=303.16 Aligned_cols=182 Identities=20% Similarity=0.220 Sum_probs=135.1
Q ss_pred CCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcC
Q 000867 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1247)
Q Consensus 674 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g 753 (1247)
.+..+.+.++++.++. +.-+++++++..++.-...+++|+||+||||+++++.|... +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 3456888888876541 11168899999999999999999999999999999998544 2356665543
Q ss_pred ccCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 754 YPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 754 ~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
+..++|-.|...-+-.+.|.+- .+....+ +... ++.+++-+..+||..-. ......+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~--pG~~----~ee~r~hl~~~Gl~g~l----a~~si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF--PGKT----EEEIRRHLGSFGLSGEL----ALQSIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhC--CCCC----HHHHHHHHHhcCCCchh----hhccccccCCc
Confidence 4567899887654444444432 2333333 1222 23356778899996421 11124579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
||-||++|.....+|.+|+|||||+.||..+-..+.+.|+.. +.-||+++|+.+
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~ 540 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE 540 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH
Confidence 999999999999999999999999999999999999999875 347999999864
No 236
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=305.63 Aligned_cols=204 Identities=28% Similarity=0.348 Sum_probs=164.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEcCcc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 755 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 755 (1247)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478899987763 245999999999999999999999999999999999986532 236999999987
Q ss_pred CCc--------ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCC-----CCCHHHHHHHHHHHHHHcCCCccccccc
Q 000867 756 KKQ--------ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-----EVDSETQKMFIEEIMELVELNPLRQSLV 822 (1247)
Q Consensus 756 ~~~--------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~-----~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 822 (1247)
+.. ...++.++|++|++.+++.+|+.||+.+......+. ....+..+++++++++.+|+.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999999999999999998753211000 1112233456889999999987777665
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 823 GLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 823 g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||||+.+|++|+|||||+|||..++..+.+.|+++.+ +|+|||+++|++.. +.+..|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~-~~~~~d~ 222 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDY-ALRYCER 222 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhCCE
Confidence 46999999999999999999999999999999999999999999999875 48999999999863 4444555
No 237
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=306.29 Aligned_cols=203 Identities=22% Similarity=0.281 Sum_probs=166.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEE
Confidence 4688999998763 23599999999999999999999999999999999998653 47999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
+.. ...++.++|++|++.+++.+|++|++.+...-..+ .....+..+++++++++.+|+.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCC
Confidence 643 22345689999999988889999999765211100 00011233456788999999987766664 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+..|+
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~ 213 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASH 213 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998764 899999999986 46667776
No 238
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-32 Score=275.42 Aligned_cols=191 Identities=27% Similarity=0.422 Sum_probs=160.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
|+.+|++|+.. ++.+|+++|++++|||++||+||||||||||||.|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 56788988864 45799999999999999999999999999999999998763 3799999999876
Q ss_pred cc---cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCC--CHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 758 QE---TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEV--DSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 758 ~~---~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~--~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ...+..+.+||+..+-.-.||+|-+.++. .|... ..++..+.+++++...++.+++.... ..|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr---~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGR---IPHRSGREPEEDERIAAQALAATDLSGLAGRDY-----RTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcc---cccccCCCchhhHHHHHHHHHHcChhhhhccch-----hhcCc
Confidence 43 34455689999988876689999999874 33321 22244455788999999998887665 46999
Q ss_pred HHHHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 833 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~------~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
||||||.+||.|+. ++++||||||||+||..-+..++++.|+++++|..|+++.||.+.
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL 203 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL 203 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH
Confidence 99999999999975 456999999999999999999999999999999999999999874
No 239
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-32 Score=300.92 Aligned_cols=204 Identities=23% Similarity=0.316 Sum_probs=160.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC---CCCeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~---~~~~~~G~i~i~g 753 (1247)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. +..+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 477889887763 235999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. ....+..++.++++++.+|+.+..+.... ...+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87643 133557899999988887 699999987654331 11223344567889999998643211111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+..|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~ 214 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDK 214 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCE
Confidence 799999999999999999999999999999999999999999999985 5799999999986 45566776
No 240
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.3e-32 Score=313.97 Aligned_cols=191 Identities=26% Similarity=0.364 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 32 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 108 (303)
T TIGR01288 32 CFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMS 108 (303)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999876432 12467999999998888999999998754321100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
. .+.+..++.+++.++|++..++.+ .+|||||||||+||||
T Consensus 109 ----------~------------------------~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 109 ----------T------------------------REIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARA 149 (303)
T ss_pred ----------H------------------------HHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHH
Confidence 0 001123456788899987666554 4799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+.+|++++|||||+|||+.++..+.+.++++.+ .+++|++++|+.+++.++||++++|++|++++.|+++++.+
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999754 35667778999999999999999999999999999888753
No 241
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-32 Score=300.26 Aligned_cols=194 Identities=26% Similarity=0.296 Sum_probs=156.9
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECCC
Confidence 5678877653 23599999999999999999999999999999999998653 47999999987643
Q ss_pred c----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCHH
Q 000867 759 E----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVE-LNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 759 ~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSgG 833 (1247)
. ..++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.++ +.+..++.+ +.||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCHH
Confidence 1 124568999999999999999999987654321 11 1223566777776 455555554 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 201 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADR 201 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998764 899999999985 34445665
No 242
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5e-33 Score=315.06 Aligned_cols=191 Identities=26% Similarity=0.404 Sum_probs=152.6
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+||+|+|||||||+||+|.+..+ . +|+|.+||+++.+.. .|+.|||||||..+|.+ ||.+||.+|..-.+
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~sas-- 453 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNPSAS-- 453 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCCCcC--
Confidence 69999999999999999999988 3 899999999986543 46789999998777654 99999999642111
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
++.+.+.|++ .+ ..+. ...|+++.+|.||+++. .|||||||||+||||
T Consensus 454 --~eeV~e~~k~---a~------------------------~hd~--i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa 501 (591)
T KOG0057|consen 454 --DEEVVEACKR---AG------------------------LHDV--ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARA 501 (591)
T ss_pred --HHHHHHHHHH---cC------------------------cHHH--HHhccccchhhHhhccc-ccccchHHHHHHHHH
Confidence 1111122111 11 1111 23488999999997655 699999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
++.+|+|+++|||||+||++++.++++.+.+. ..++|++.+.|+. .....||+|++|++|++.+.|++++++.
T Consensus 502 ~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 502 FLKDAPILLLDEATSALDSETEREILDMIMDV---MSGRTVIMIVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HhcCCCeEEecCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999999999999883 2345555577766 5677899999999999999999999875
No 243
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=319.97 Aligned_cols=191 Identities=20% Similarity=0.301 Sum_probs=159.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|+|+++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.++..
T Consensus 56 i~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~ 132 (400)
T PRK10070 56 IFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGME 132 (400)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998754321 2479999999999999999999998764
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+.. . .+.+..++++++.+||.+..+ +.+..|||||||||
T Consensus 133 ~~~~~----------~------------------------~~~~~~~~e~L~~~gL~~~~~-----~~~~~LSgGq~QRv 173 (400)
T PRK10070 133 LAGIN----------A------------------------EERREKALDALRQVGLENYAH-----SYPDELSGGMRQRV 173 (400)
T ss_pred hcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhh-----cCcccCCHHHHHHH
Confidence 32210 0 011123567899999976544 44568999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|+++||||||+|||+.++.++.+.|+++.+. .+++|++++|+.+++..++|+|++|++|+++..|+++++
T Consensus 174 ~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l 252 (400)
T PRK10070 174 GLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEI 252 (400)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999987553 355677789999999999999999999999999988776
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 253 ~ 253 (400)
T PRK10070 253 L 253 (400)
T ss_pred H
Confidence 4
No 244
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.3e-32 Score=304.00 Aligned_cols=201 Identities=28% Similarity=0.393 Sum_probs=162.9
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 56788887663 24599999999999999999999999999999999998653 4799999998764
Q ss_pred c---ccccceEEEeccCCCCCCCcCHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 758 Q---ETFTRISGYCEQNDIHSPFVTVYESLLYSAW-LRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 758 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
. ...++.++|++|++.+++.+||+||+.+... .+...........+++.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 2234568999999877788999999987521 100000111223456788999999987777665 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+..|+
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDH 206 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998777899999999986 45566676
No 245
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-32 Score=302.18 Aligned_cols=209 Identities=22% Similarity=0.280 Sum_probs=165.8
Q ss_pred CCCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEE
Q 000867 672 PFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGN 748 (1247)
Q Consensus 672 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~ 748 (1247)
|..+..++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 34455799999998763 24599999999999999999999999999999999997642 135899
Q ss_pred EEEcCccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccccccc
Q 000867 749 ITISGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVG 823 (1247)
Q Consensus 749 i~i~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g 823 (1247)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... . ....+..++++.++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987642 123557899999988887 69999998764321 1 11233445667889999998643222221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...+.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|++. ++.+..|+
T Consensus 159 -~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~ 231 (267)
T PRK14237 159 -KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDY 231 (267)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCE
Confidence 1245799999999999999999999999999999999999999999999985 4799999999986 46666776
No 246
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-32 Score=304.27 Aligned_cols=200 Identities=25% Similarity=0.288 Sum_probs=164.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 5889999887631 123599999999999999999999999999999999998653 479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ...++.++|++|++. +++..|+.+|+.+..... ....+...+.++++++.+++.+..+..+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567899999974 677789999998764322 2233444556788999999987776654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++.. +.. .|+
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~~-~d~ 211 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AME-ADH 211 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hhc-CCE
Confidence 9999999999999999999999999999999999999999998764 8999999999864 333 565
No 247
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-32 Score=302.62 Aligned_cols=202 Identities=24% Similarity=0.274 Sum_probs=161.7
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~ 752 (1247)
..++++|+++.+. ++.+|+|+|++|+|||+++|+||||||||||+++|+|..++ .+.+|+|.++
T Consensus 18 ~~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~ 84 (267)
T PRK14235 18 IKMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLD 84 (267)
T ss_pred ceEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEEC
Confidence 3689999998763 23599999999999999999999999999999999997542 1357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc----cccccc
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL----RQSLVG 823 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~----~~~~~g 823 (1247)
|.++.. ..+++.++|++|++.+++. |+.||+.+....+.. ....+..+++++++++.+|+.+. .+..
T Consensus 85 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 160 (267)
T PRK14235 85 GEDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP-- 160 (267)
T ss_pred CEECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC--
Confidence 987642 2345678999999888875 999999886543311 11223334567889999999642 2222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+-+..|+
T Consensus 161 ---~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~ 231 (267)
T PRK14235 161 ---GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQR 231 (267)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCE
Confidence 357999999999999999999999999999999999999999999999865 689999999985 34455565
No 248
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=310.58 Aligned_cols=191 Identities=25% Similarity=0.357 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDV-HIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++. .+...||+||+.|+...
T Consensus 35 ~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 111 (287)
T PRK13637 35 FVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPIN 111 (287)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHH
Confidence 47999999999999999999999987 99999999887542 22467999999853 34467999999986432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc--ccccccccCCccccccccccch
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE--VCDDTLVGDEMVRGISGGQKKR 152 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~vg~~~~~~LSGGqrqR 152 (1247)
.+.. .++..+.++++++.+||+ +.. ++.++.||||||||
T Consensus 112 ~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~~LSgGq~qr 152 (287)
T PRK13637 112 LGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYK-----DKSPFELSGGQKRR 152 (287)
T ss_pred CCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhc-----cCCcccCCHHHHHH
Confidence 1100 011223456789999996 333 45566899999999
Q ss_pred hHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 153 vsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
++|||||+.+|++++|||||+|||+.++.++.+.++++.+. .+++|++++|+.+++..+||+|++|++|++++.|++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998653 35677778999999999999999999999999999888
Q ss_pred HH
Q 000867 233 VL 234 (1247)
Q Consensus 233 ~~ 234 (1247)
+.
T Consensus 232 ~~ 233 (287)
T PRK13637 232 VF 233 (287)
T ss_pred HH
Confidence 64
No 249
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.1e-32 Score=314.61 Aligned_cols=188 Identities=21% Similarity=0.304 Sum_probs=159.9
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc----cCCc---cc---c-cceEEEec
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY----PKKQ---ET---F-TRISGYCE 769 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~~~v~ 769 (1247)
+...+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|. ++.. .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 446799999999999999999999999999999999998763 4799999996 2221 11 1 24689999
Q ss_pred cCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCc
Q 000867 770 QNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPS 849 (1247)
Q Consensus 770 q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~ 849 (1247)
|+..++|.+||+||+.|....+ ..+.++.+++++++++.+||.+..+...+ .||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPG-----ELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875433 23345556678899999999888777653 699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 850 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 850 il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.++.|+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~Dr 234 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNR 234 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999998764 899999999986 45667777
No 250
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-32 Score=304.02 Aligned_cols=199 Identities=28% Similarity=0.349 Sum_probs=162.7
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+. .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 56888887763 123599999999999999999999999999999999998653 4799999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 758 Q-----ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
. ...++.++|++|++. .+...||.|++.+..... ....++..+++.++++.+||.+..++.+ +.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 333479999998754221 2233444566889999999988877765 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~ 206 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADK 206 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998777999999999976 44556676
No 251
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=307.24 Aligned_cols=191 Identities=24% Similarity=0.336 Sum_probs=157.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-------ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-------PQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 52 ~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 128 (269)
T cd03294 52 IFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999987 999999998765321 12479999999988989999999998653
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+. . . .+..+.++++++.+||.+..++. +..|||||||||
T Consensus 129 ~~~~----~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv 169 (269)
T cd03294 129 VQGV----P------R------------------------AEREERAAEALELVGLEGWEHKY-----PDELSGGMQQRV 169 (269)
T ss_pred hcCC----C------H------------------------HHHHHHHHHHHHHcCCHhHhhCC-----cccCCHHHHHHH
Confidence 2210 0 0 00112356688999997655544 457999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.++++.+. .+.+|++++|+.+++.+++|++++|++|++++.|+++++
T Consensus 170 ~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 248 (269)
T cd03294 170 GLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEI 248 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987653 355677789999999999999999999999999988765
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 249 ~ 249 (269)
T cd03294 249 L 249 (269)
T ss_pred H
Confidence 4
No 252
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-32 Score=276.32 Aligned_cols=192 Identities=28% Similarity=0.400 Sum_probs=157.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
|++|+||||||||||||.|+|++.|+ +|++.+||.+.+.... .+.-+..||+..+-+..||+|.+.++..-.+.
T Consensus 29 v~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~ 105 (259)
T COG4559 29 VLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS 105 (259)
T ss_pred EEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc
Confidence 57999999999999999999999997 9999999999876543 25679999998887778999999998542211
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
++. ..+..++++..|...++...+ .+....|||||||||.+||
T Consensus 106 g~~--------------------------------~~e~~~i~~~ala~~d~~~la-----~R~y~~LSGGEqQRVqlAR 148 (259)
T COG4559 106 GRE--------------------------------PEEDERIAAQALAATDLSGLA-----GRDYRTLSGGEQQRVQLAR 148 (259)
T ss_pred CCC--------------------------------chhhHHHHHHHHHHcChhhhh-----ccchhhcCchHHHHHHHHH
Confidence 110 011223456667777766544 3556789999999999999
Q ss_pred HHhc------CCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 158 MMVG------PALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 158 al~~------~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
.|++ ++++||||||||+||....++++++.+++++. +..|+.+.|+.+-+..+||||++|++||++..|+++
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 9986 45699999999999999999999999999875 355666899999999999999999999999999998
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
+++
T Consensus 227 ~vl 229 (259)
T COG4559 227 DVL 229 (259)
T ss_pred Hhc
Confidence 876
No 253
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.3e-32 Score=297.41 Aligned_cols=197 Identities=27% Similarity=0.397 Sum_probs=163.6
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5677777653 23599999999999999999999999999999999998653 47999999988653
Q ss_pred c-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 759 E-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 759 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
. ..++.++|++|++.+++.+|+.||+.+....+ ........+.++++++.+++.+..++.. +.||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 23457899999999999999999998765432 1223334456788999999987777665 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++|||+|+.+|++++|||||+|||..+...+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~ 200 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADR 200 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCE
Confidence 99999999999999999999999999999999999998765 899999999985 44555666
No 254
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=302.70 Aligned_cols=195 Identities=25% Similarity=0.353 Sum_probs=156.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++........
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~ 106 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSE 106 (239)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccc
Confidence 47999999999999999999999886 999999998765322 24579999999888888999999998643211000
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
+.+ ..+..+.++++++.+||.+..+. .+.+|||||||||+|||||
T Consensus 107 ~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la~al 151 (239)
T cd03296 107 RPP------------------------------EAEIRAKVHELLKLVQLDWLADR-----YPAQLSGGQRQRVALARAL 151 (239)
T ss_pred cCC------------------------------HHHHHHHHHHHHHHcCChhhhhc-----ChhhCCHHHHHHHHHHHHH
Confidence 000 00111235667888998754443 4557999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++..+.+.++++++. .+++|++++|+.+++...+|++++|++|++++.|+++++.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 9999999999999999999999999999987653 2456777899999999999999999999999999877653
No 255
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-32 Score=307.33 Aligned_cols=205 Identities=19% Similarity=0.291 Sum_probs=162.3
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++... .....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 5 ~~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~ 74 (289)
T PRK13645 5 KDIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYA 74 (289)
T ss_pred ceEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 3588999998774110 0013599999999999999999999999999999999998653 47999999987
Q ss_pred CCc--------ccccceEEEeccCCCC-CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCC
Q 000867 756 KKQ--------ETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLP 825 (1247)
Q Consensus 756 ~~~--------~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~ 825 (1247)
+.. ...++.++|++|++.. ....|++||+.|..... ....+...++++++++.++|. +..++.+
T Consensus 75 i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~--- 148 (289)
T PRK13645 75 IPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP--- 148 (289)
T ss_pred ccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh---
Confidence 531 2345678999999742 22369999998764321 123344445678899999994 5556554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 149 --~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~ 220 (289)
T PRK13645 149 --FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADE 220 (289)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998754 899999999986 45566776
No 256
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-32 Score=332.05 Aligned_cols=204 Identities=22% Similarity=0.292 Sum_probs=168.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++++++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 478899988763 2459999999999999999999999999999999999865423589999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQET----FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.... .++.+||++|++.+++.+||+|++.+....+.....+.+..+++++++++.+|+.+..+..+ +.|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24568999999989999999999988653321111123334456889999999987777765 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. .+.+..|+
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~ 212 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDT 212 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999999998777999999999985 34455666
No 257
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2e-32 Score=302.48 Aligned_cols=200 Identities=24% Similarity=0.320 Sum_probs=157.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~----~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+|||||||||||++|+|+++|. +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~ 104 (236)
T cd03219 28 IHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQART 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcc
Confidence 47999999999999999999999886 9999999988754321 2469999999999999999999998653221
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. . .... .. .....+....++++++.+||++..+ +.++.|||||||||+||
T Consensus 105 ~~-~------~~~~-----~~------------~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~la 155 (236)
T cd03219 105 GS-G------LLLA-----RA------------RREEREARERAEELLERVGLADLAD-----RPAGELSYGQQRRLEIA 155 (236)
T ss_pred cc-c------cccc-----cc------------cccHHHHHHHHHHHHHHcCccchhh-----CChhhCCHHHHHHHHHH
Confidence 00 0 0000 00 0000111234567889999976544 44567999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+.+.++++.+ . +++|++++|+.+++.++||++++|++|++++.|+++++.
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 999999999999999999999999999999998764 3 556777899999999999999999999999999877653
No 258
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-32 Score=303.35 Aligned_cols=203 Identities=27% Similarity=0.360 Sum_probs=161.6
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC------eEEEEEEE
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 751 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~------~~~G~i~i 751 (1247)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56788887653 245999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 752 SGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 752 ~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
+|.+... ..+++.++|++|++..++.+|++||+.+....... .....+..++.++++++.+|+.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987642 23345689999998766679999999875321110 01111233456788999999987766554
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhh
Q 000867 828 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESF 897 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~---------~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~f 897 (1247)
..||||||||++|||+|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+..
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 469999999999999999 599999999999999999999999999998765 899999999986 455566
Q ss_pred hc
Q 000867 898 DE 899 (1247)
Q Consensus 898 d~ 899 (1247)
|+
T Consensus 223 d~ 224 (272)
T PRK13547 223 DR 224 (272)
T ss_pred CE
Confidence 76
No 259
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-31 Score=307.90 Aligned_cols=209 Identities=17% Similarity=0.220 Sum_probs=164.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-C-eEEEEEEEcCc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGY 754 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~-~-~~~G~i~i~g~ 754 (1247)
.++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..+. + ..+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 37889998877421 1124699999999999999999999999999999999997642 2 35899999998
Q ss_pred cCCcc---c----ccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000867 755 PKKQE---T----FTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1247)
Q Consensus 755 ~~~~~---~----~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 825 (1247)
++... . +++.++|++|++ .+.|.+|+.+++........ ....++.++++.++++.+||.+..+.. +.
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l--~~ 149 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRL--DV 149 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHH--hC
Confidence 86431 1 123689999998 47888999988765543221 223445567789999999997532111 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+..|||||||||+|||||+.+|++|++||||+|||..++..+++.|+++.+ .|.|+|++||+.+. +.+..|+
T Consensus 150 ~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~-~~~~adr 223 (326)
T PRK11022 150 YPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLAL-VAEAAHK 223 (326)
T ss_pred CchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhCCE
Confidence 2357999999999999999999999999999999999999999999999875 48999999999863 4556677
No 260
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.4e-32 Score=299.29 Aligned_cols=180 Identities=24% Similarity=0.340 Sum_probs=147.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~ 107 (216)
T TIGR00960 31 MVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRI 107 (216)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHh
Confidence 47999999999999999999999887 999999998764321 246799999999889999999999986542
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. .++....++++++.+||++..+. .+.+|||||||||+
T Consensus 108 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~ 148 (216)
T TIGR00960 108 IGVP----------------------------------PRDANERVSAALEKVGLEGKAHA-----LPMQLSGGEQQRVA 148 (216)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 2100 00011235667889999765544 44579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcE
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v 224 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+.+..+||++++|++|++
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998754 3 55677789999999999999999999974
No 261
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=317.54 Aligned_cols=185 Identities=24% Similarity=0.350 Sum_probs=157.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.|+.+
T Consensus 26 ~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 102 (352)
T PRK11144 26 ITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA 102 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh
Confidence 47999999999999999999999987 99999999876431 124679999999999999999999988531
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
. . .+..++++++.+||.+..+ +.+.+|||||||||
T Consensus 103 ~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGq~qRv 137 (352)
T PRK11144 103 K-----------S-----------------------------MVAQFDKIVALLGIEPLLD-----RYPGSLSGGEKQRV 137 (352)
T ss_pred h-----------h-----------------------------hHHHHHHHHHHcCCchhhh-----CCcccCCHHHHHHH
Confidence 0 0 0112566788999976544 44567999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..++|++++|++|+++..|+++++
T Consensus 138 alaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 138 AIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999999999999999987653 356677789999999999999999999999999999887
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 217 ~ 217 (352)
T PRK11144 217 W 217 (352)
T ss_pred H
Confidence 5
No 262
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-32 Score=302.37 Aligned_cols=199 Identities=23% Similarity=0.288 Sum_probs=160.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~ 752 (1247)
..++++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|..+. .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4689999988763 23599999999999999999999999999999999997542 1357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g 823 (1247)
|.++.. ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 987531 234556899999998888 499999988754331 111 23345677888888743 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~ 222 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDM 222 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCE
Confidence 357999999999999999999999999999999999999999999999854 789999999985 45566776
No 263
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.5e-31 Score=294.55 Aligned_cols=159 Identities=25% Similarity=0.303 Sum_probs=125.0
Q ss_pred eceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCHHHHHHH
Q 000867 707 NGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLY 786 (1247)
Q Consensus 707 ~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~ 786 (1247)
.-=.++|..||+++++||||-||||+.++|+|..+++ +|+ . ..-.++|=||--.-....||++-|.-
T Consensus 358 ~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~-------~~~~vSyKPQyI~~~~~gtV~~~l~~ 424 (591)
T COG1245 358 EVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----E-------EDLKVSYKPQYISPDYDGTVEDLLRS 424 (591)
T ss_pred EecCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----C-------ccceEeecceeecCCCCCcHHHHHHH
Confidence 3335678889999999999999999999999976532 443 1 01235788887555567899998754
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHH
Q 000867 787 SAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 866 (1247)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~ 866 (1247)
...-+... . ....++.+-|+|.+..+..+. +|||||.|||+||.+|.+++++.+||||++.||.+.+.
T Consensus 425 ~~~~~~~~---s----~~~~ei~~pl~l~~i~e~~v~-----~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~ 492 (591)
T COG1245 425 AIRSAFGS---S----YFKTEIVKPLNLEDLLERPVD-----ELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRI 492 (591)
T ss_pred hhhhhccc---c----hhHHhhcCccchHHHHhcccc-----cCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHH
Confidence 33221111 1 123468888999988888874 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEeccCC
Q 000867 867 IVMRTVRNTVD-TGRTVVCTIHQPS 890 (1247)
Q Consensus 867 ~i~~~l~~~~~-~g~tvi~~~H~~~ 890 (1247)
.+.+.||+... .++|.+++-||.-
T Consensus 493 ~vakvIRR~~e~~~kta~vVdHDi~ 517 (591)
T COG1245 493 IVAKVIRRFIENNEKTALVVDHDIY 517 (591)
T ss_pred HHHHHHHHHHhhcCceEEEEeccee
Confidence 99999999874 4789999999874
No 264
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-32 Score=301.03 Aligned_cols=191 Identities=25% Similarity=0.337 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~ 109 (233)
T cd03258 33 IFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEI 109 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999998875421 145799999999989889999999886432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+. . . .+....++++++.+||++..+. .+..|||||||||+
T Consensus 110 ~~~----~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 150 (233)
T cd03258 110 AGV----P---K---------------------------AEIEERVLELLELVGLEDKADA-----YPAQLSGGQKQRVG 150 (233)
T ss_pred cCC----C---H---------------------------HHHHHHHHHHHHHCCChhhhhc-----ChhhCCHHHHHHHH
Confidence 210 0 0 0011235677889999765443 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+. ++++|++++|+.+++.+++|++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999987553 3566777899999999999999999999999999876653
No 265
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-32 Score=298.91 Aligned_cols=204 Identities=21% Similarity=0.276 Sum_probs=158.8
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-CeEEEEEEEcCccC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 756 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~-~~~~G~i~i~g~~~ 756 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788887763 23599999999999999999999999999999999997532 23579999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
.. ...++.++|++|++.+++ .|++||+.+....+.... .....+++++++++.+++.+...... +...+.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKL-KQNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHh-cCCcccCCHH
Confidence 43 234567899999998887 699999988654331101 12233456788999999953211111 1123579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+..|+
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~ 210 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADY 210 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcE
Confidence 99999999999999999999999999999999999999999864 899999999985 23444555
No 266
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-31 Score=298.65 Aligned_cols=206 Identities=21% Similarity=0.297 Sum_probs=162.7
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~~-~~~G~i~i~ 752 (1247)
..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++
T Consensus 3 ~~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~ 69 (252)
T PRK14256 3 NKVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLD 69 (252)
T ss_pred cEEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEEC
Confidence 3578999988763 2359999999999999999999999999999999999753 21 247999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
|.++.. ..+++.++|++|+..+++.+|++||+.+...... ....+..+++++++++.+++.+....... ...
T Consensus 70 g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 146 (252)
T PRK14256 70 DTDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNA 146 (252)
T ss_pred CEEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCc
Confidence 987632 2345679999999999999999999987543221 11223334567889999998542111111 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 147 ~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~ 216 (252)
T PRK14256 147 MELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDY 216 (252)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCE
Confidence 57999999999999999999999999999999999999999999999865 689999999985 45566676
No 267
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.1e-32 Score=305.15 Aligned_cols=204 Identities=21% Similarity=0.270 Sum_probs=165.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-++++|++++++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEec
Confidence 478999988874110 00124699999999999999999999999999999999998663 479999999886
Q ss_pred Cc----ccccceEEEeccCCCC-CCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 757 KQ----ETFTRISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.. ...++.+||++|++.. +...||.|++.|..... ..+..+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2345678999999742 23468999998865322 2233444567889999999988877765 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|+++. +- ..|+
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~ 213 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADR 213 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCE
Confidence 99999999999999999999999999999999999999999998754 8999999999975 32 3666
No 268
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=6e-32 Score=298.91 Aligned_cols=194 Identities=28% Similarity=0.378 Sum_probs=158.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEh
Confidence 477889987763 23599999999999999999999999999999999998653 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 832 (1247)
.. ...++.++|++|++.+++ .|++||+.+....+ . . .++++.++++.+++. +..++.. ..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G-E---KNVDVEYYLSIVGLNKEYATRDV-----KNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C-c---HHHHHHHHHHHcCCCHHHhhCCc-----ccCCH
Confidence 42 234567899999988887 69999987653221 1 1 123577889999996 4555443 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+-+..|+
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~ 201 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDY 201 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998764 899999999986 34455666
No 269
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.1e-31 Score=295.58 Aligned_cols=184 Identities=28% Similarity=0.400 Sum_probs=155.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCcCHHHH
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFTRISGYCEQNDIHSPFVTVYES 783 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv~e~ 783 (1247)
+|+|+|++++|||+++|+||||||||||+++|+|..++ ..|+|.++|.++... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 89999999999999999999999999999999998653 479999999876532 234578999999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHH
Q 000867 784 LLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 863 (1247)
Q Consensus 784 l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~ 863 (1247)
+.+..... .......++.+.++++.+||.+..++.+ +.||||||||++|||||+.+|++++|||||+|||..
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223334456788999999988777765 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 864 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 864 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~ 199 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADK 199 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999998654 899999999985 35555666
No 270
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.98 E-value=3e-32 Score=300.32 Aligned_cols=189 Identities=21% Similarity=0.354 Sum_probs=155.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.+.....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG 104 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC
Confidence 47999999999999999999999887 999999998764322 12469999999989999999999988643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. . .+....++++++.+|+.+..++ .+..||||||||++||
T Consensus 105 ~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la 145 (232)
T cd03218 105 LS----------K------------------------KEREEKLEELLEEFHITHLRKS-----KASSLSGGERRRVEIA 145 (232)
T ss_pred CC----------H------------------------HHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHHHH
Confidence 00 0 0111235677888898765444 4557999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
|||+.+|++++|||||+|||+.++..+.+.++++.+ .+++|++++|+.+++.+.+|++++|++|++++.|+.+++
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999999999999998754 255677789999999999999999999999999987665
No 271
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=99.98 E-value=1.2e-31 Score=293.58 Aligned_cols=205 Identities=23% Similarity=0.277 Sum_probs=159.1
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcC--c-
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG--Y- 754 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g--~- 754 (1247)
++++|+++.++.... ...++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++| .
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 567888877642100 00124699999999999999999999999999999999998653 479999984 2
Q ss_pred -cCCc---cc----ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCC
Q 000867 755 -PKKQ---ET----FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLP 825 (1247)
Q Consensus 755 -~~~~---~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~ 825 (1247)
+... .. .++.++|++|++.+++.+||+|++.+..... ....+..++++.++++.+|+.+. .+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 147 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPP--- 147 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCc---
Confidence 3221 11 1346899999999999999999998754322 12233344567889999999753 34443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 148 --~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~ 218 (224)
T TIGR02324 148 --ATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADR 218 (224)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcce
Confidence 479999999999999999999999999999999999999999999998777899999999953 23344554
No 272
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.8e-32 Score=305.37 Aligned_cols=202 Identities=24% Similarity=0.286 Sum_probs=165.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCe-EEEEEEEcCcc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 755 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~-~~G~i~i~g~~ 755 (1247)
.++++|+++.++. .++.+|+|+|++|++||+++|+||||||||||+++|+|..++.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4889999887631 12359999999999999999999999999999999999765321 13899999988
Q ss_pred CCcc---cccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 756 KKQE---TFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 756 ~~~~---~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.... ..++.+||++|++. .++..||.||+.|....+ ..+.++.+++++++++.+||.+..+..+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 6532 23457899999974 567789999998764322 2334455567889999999988777665 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ...|+
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~ 212 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQ 212 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 99999999999999999999999999999999999999999998764 8999999999974 3 45676
No 273
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.1e-32 Score=297.29 Aligned_cols=185 Identities=27% Similarity=0.373 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.. .++.++|++|++.+++.+||+||+.++....+..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 104 (220)
T cd03293 32 FVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLDNVALGLELQGVP-- 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999886 9999999987653 3467999999988888899999998865322100
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
. ++....++++++.+||.+..+. .+..||||||||++|||||+
T Consensus 105 --------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~la~al~ 147 (220)
T cd03293 105 --------K------------------------AEARERAEELLELVGLSGFENA-----YPHQLSGGMRQRVALARALA 147 (220)
T ss_pred --------H------------------------HHHHHHHHHHHHHcCChhhhhC-----CcccCCHHHHHHHHHHHHHH
Confidence 0 0011235678889999765444 34579999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEec--CCcEEEecCc
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DAQIVYQGPR 230 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~--~G~v~~~G~~ 230 (1247)
.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++.+.+|++++|+ +|++++.++.
T Consensus 148 ~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 148 VDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred cCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999987543 35567778999989999999999999 7999988764
No 274
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=99.98 E-value=6.9e-32 Score=295.12 Aligned_cols=195 Identities=24% Similarity=0.367 Sum_probs=158.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. ++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 588999987763 2359999999999999999999999999999999999765 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 832 (1247)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .+++++++++.+++. ...++.+ +.|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 42 224567899999988887 4999999875433211 11 124567899999995 3455554 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++ |.|||+++|++.. + +..|+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~ 206 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADK 206 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999998754 8999999999864 2 33554
No 275
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=99.98 E-value=2.4e-32 Score=311.18 Aligned_cols=190 Identities=25% Similarity=0.352 Sum_probs=159.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.+.+.+..
T Consensus 30 i~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~ 106 (301)
T TIGR03522 30 IVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMK 106 (301)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 99999999887542 22467999999999999999999999865442210
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+....++++++.+||.+..+.. ++.|||||||||+||+|
T Consensus 107 ----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 107 ----------------------------------GQLLKQRVEEMIELVGLRPEQHKK-----IGQLSKGYRQRVGLAQA 147 (301)
T ss_pred ----------------------------------HHHHHHHHHHHHHHCCCchHhcCc-----hhhCCHHHHHHHHHHHH
Confidence 001112356788999998766544 45799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|++++|||||+|||+.++.++++.++++. . +++|++++|+.+++.++||+|++|++|++++.|+.+++..
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~-~--~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG-K--DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc-C--CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999999999999999874 2 3677779999999999999999999999999999988754
No 276
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.2e-32 Score=296.81 Aligned_cols=196 Identities=24% Similarity=0.289 Sum_probs=160.2
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++. ...|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------------~~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH---------------LPMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC---------------ccceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 568888887631 1238999999999999999999999999999999865 34799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 758 QE-TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 758 ~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
.. ..++.++|++|++.+++.+|+.||+.+...... .. .+..+++++++++.+|+.+..++.+ +.|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhccccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 124568999999999999999999976532111 11 1233456889999999988777765 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|||+++.+|++++|||||+|||..++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 199 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPR 199 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998754 899999999986 34455666
No 277
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.98 E-value=2.3e-32 Score=342.31 Aligned_cols=195 Identities=24% Similarity=0.373 Sum_probs=160.8
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.+. +++++|+|+|++++|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 4699999986542 1246999999999999999999999999999999999987 3 37999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~ 825 (1247)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.+. ++++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 754 456778999999999887 59999998752 12333 33556666666543 236777654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.+||||||||++|||||+++|+||+||||||+||++++..+++.|+++. +++|+|+++|+++ ..+.+|+
T Consensus 483 -G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~ 552 (588)
T PRK11174 483 -AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQ 552 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCE
Confidence 45799999999999999999999999999999999999999999999875 5799999999994 4566777
No 278
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=99.98 E-value=2.1e-32 Score=300.32 Aligned_cols=189 Identities=22% Similarity=0.312 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCC-----CCCCceeeEEEECCccCCCCc-----ccceEEEeccccccCCCCCHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKL-----DSKLKFSGRVTYNGHGMDEFV-----PQRTAAYISQHDVHIGEMTVRETLAF 70 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~-----~~~~~~~G~v~~~g~~~~~~~-----~~~~i~yv~Q~~~~~~~lTv~e~l~f 70 (1247)
+++|+||||||||||+++|+|.. +|. +|+|.++|+++.... .++.++|++|++.++ .+||+||+.+
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~ 103 (227)
T cd03260 28 ITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAY 103 (227)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHh
Confidence 47999999999999999999999 776 999999998764322 246799999998877 7899999988
Q ss_pred HHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000867 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1247)
+....+.. . . .+.+..++++++.+||.+..+.... +.+||||||
T Consensus 104 ~~~~~~~~---~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~ 147 (227)
T cd03260 104 GLRLHGIK---L------K------------------------EELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQ 147 (227)
T ss_pred HHHhcCCC---c------H------------------------HHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHH
Confidence 64322100 0 0 0011234667888999765443320 357999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|++++|+.+++.+.||++++|++|++++.|++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 999999999999999999999999999999999999998754 3 6677789999999999999999999999999987
Q ss_pred ch
Q 000867 231 EL 232 (1247)
Q Consensus 231 ~~ 232 (1247)
++
T Consensus 225 ~~ 226 (227)
T cd03260 225 EQ 226 (227)
T ss_pred cc
Confidence 64
No 279
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.6e-31 Score=306.03 Aligned_cols=207 Identities=19% Similarity=0.244 Sum_probs=163.5
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~ 752 (1247)
..++++|+++.+.. +.+.+|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46999999988741 124599999999999999999999999999999999997531 2357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
|.++.. ...++.++|++|++.+++ .|++||+.|..... ...+.+..++.++++++.++|.+..++.++. ..
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 998752 234667999999998875 79999998864321 1111222334567888888885433333332 34
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Dr 293 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDE 293 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 57999999999999999999999999999999999999999999998865 699999999985 34455666
No 280
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.98 E-value=1.2e-31 Score=286.61 Aligned_cols=183 Identities=20% Similarity=0.300 Sum_probs=152.3
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++++. ++.+++ +|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (195)
T PRK13541 2 LSLHQLQFNIE-------------QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQP--SSGNIYYKNCNIN 65 (195)
T ss_pred eEEEEeeEEEC-------------CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCcccC
Confidence 56788887763 123555 9999999999999999999999999999998653 4899999998765
Q ss_pred cccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHH
Q 000867 758 QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKR 837 (1247)
Q Consensus 758 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r 837 (1247)
... ++.++|++|+..+++..||+||+.+..... . .++.++++++.+++.+..++.+ +.||||||||
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~---~-----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~r 131 (195)
T PRK13541 66 NIA-KPYCTYIGHNLGLKLEMTVFENLKFWSEIY---N-----SAETLYAAIHYFKLHDLLDEKC-----YSLSSGMQKI 131 (195)
T ss_pred hhh-hhhEEeccCCcCCCccCCHHHHHHHHHHhc---c-----cHHHHHHHHHHcCCHhhhccCh-----hhCCHHHHHH
Confidence 322 345799999987778899999998754322 1 1234678889999987666654 4699999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 838 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 838 ~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
++||||++.+|++++|||||+|||+.+...+.+.|++..++|+|+|+++|++.
T Consensus 132 l~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 184 (195)
T PRK13541 132 VAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLES 184 (195)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 99999999999999999999999999999999999876667899999999985
No 281
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=2.7e-32 Score=295.68 Aligned_cols=183 Identities=26% Similarity=0.365 Sum_probs=151.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (210)
T cd03269 28 IFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLK-- 101 (210)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999887 9999999987653 23567999999998888899999998864322100
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
..+.+..++++++.+||++..++ .+.+||||||||++|||||+
T Consensus 102 --------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 102 --------------------------------KEEARRRIDEWLERLELSEYANK-----RVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred --------------------------------hHHHHHHHHHHHHHcCChHHHhC-----cHhhCCHHHHHHHHHHHHHh
Confidence 00112235677888999765554 34579999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++.+++|++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998754 2 456777899999999999999999999998764
No 282
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=6.7e-32 Score=282.57 Aligned_cols=161 Identities=29% Similarity=0.415 Sum_probs=139.4
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 4677777653 13599999999999999999999999999999999998653 47999999987643
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
..+++.++|++|++.+++.+|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567899999998888899999873 8999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|.|+|+++|++. .+.+..|+
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~ 164 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDR 164 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998877899999999986 44445555
No 283
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=99.98 E-value=3.5e-32 Score=295.62 Aligned_cols=185 Identities=29% Similarity=0.402 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++..||+||+.++....+..
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~- 103 (213)
T cd03301 28 FVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVP- 103 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCCC-
Confidence 37899999999999999999999886 999999998875322 2357999999988888899999998864322100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
.++.+..++++++.+||.+..+. .+..||||||||++|||||
T Consensus 104 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qr~~laral 145 (213)
T cd03301 104 ---------------------------------KDEIDERVREVAELLQIEHLLDR-----KPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCHHHHhC-----ChhhCCHHHHHHHHHHHHH
Confidence 00112235677888999765554 4457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
+.+|++++|||||+|||+.++..+.+.++++++.. +.+|++++|+.+++.+++|++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999876533 456677899999999999999999999998876
No 284
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=3.2e-32 Score=337.55 Aligned_cols=194 Identities=31% Similarity=0.452 Sum_probs=160.3
Q ss_pred CCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcC
Q 000867 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1247)
Q Consensus 674 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g 753 (1247)
..+.++|+|+.++++.++ +..+|+|+|+.|++||.+||+|||||||||++++|.+..+ +.+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcC
Confidence 456899999999987543 3469999999999999999999999999999999999776 4589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-------CCCcccccccc
Q 000867 754 YPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELV-------ELNPLRQSLVG 823 (1247)
Q Consensus 754 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l-------~l~~~~~~~~g 823 (1247)
.++.. ...+..+|.|.|+|.++. .|++||+.|+- ++.+.++ ++++.+.. .|.+-.|+.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF~-~tI~eNI~~G~-----~dat~~~----i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLFA-TTIRENIRYGK-----PDATREE----IEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhhc-ccHHHHHhcCC-----CcccHHH----HHHHHHHccHHHHHHhhHHhhccccc
Confidence 98764 345678999999998775 79999998752 2222222 33333332 34455678888
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
..+. .||||||||++|||||+++|+||+||||||+||+++.+.++++|.+.. +|+|.|+++|+.|.
T Consensus 485 e~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 485 ERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLST 550 (1228)
T ss_pred CCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehhh
Confidence 6554 499999999999999999999999999999999999999999998764 68999999999863
No 285
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.6e-32 Score=308.87 Aligned_cols=207 Identities=25% Similarity=0.354 Sum_probs=163.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEecccc--ccCCCCCHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHD--VHIGEMTVRETLAFS 71 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .++ ..||.||+.|+
T Consensus 34 ~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~ 109 (288)
T PRK13643 34 YTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFG 109 (288)
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhH
Confidence 47999999999999999999999987 99999999987421 1246799999985 444 46999999987
Q ss_pred HhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcc-cccccccCCcccccccccc
Q 000867 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqr 150 (1247)
....+.. ..+.+..++++++.+||.+ ..+ +.+..||||||
T Consensus 110 ~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~-----~~~~~LSgGqk 150 (288)
T PRK13643 110 PQNFGIP----------------------------------KEKAEKIAAEKLEMVGLADEFWE-----KSPFELSGGQM 150 (288)
T ss_pred HHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhcc-----CCcccCCHHHH
Confidence 5422110 0011224567788899852 333 45668999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
||++|||+|+.+|++++|||||+|||+.++..+.+.++++.+ .+.+|++++|+.+++..+||+|++|++|++++.|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~ 228 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTP 228 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998754 356777789999999999999999999999999999
Q ss_pred chHH---HHHHhCCCCCCCCCChhh
Q 000867 231 ELVL---DFFESMGFKCPERKGVAD 252 (1247)
Q Consensus 231 ~~~~---~~f~~~G~~~~~~~~~~~ 252 (1247)
+++. +.++..|+.+|.....++
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~~ 253 (288)
T PRK13643 229 SDVFQEVDFLKAHELGVPKATHFAD 253 (288)
T ss_pred HHHHcCHHHHHHcCCCCChHHHHHH
Confidence 8874 234456666655443333
No 286
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.98 E-value=1.4e-31 Score=306.98 Aligned_cols=209 Identities=20% Similarity=0.281 Sum_probs=166.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eEEEEEEEcCcc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 755 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 755 (1247)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..+.. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 58899998876421 12346999999999999999999999999999999999986532 237999999998
Q ss_pred CCcc---c---c-cceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000867 756 KKQE---T---F-TRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1247)
Q Consensus 756 ~~~~---~---~-~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 826 (1247)
+... . + ++.++||+|++ .+.|.+|+.+++........ ..+.++..+++.++++.+||.+..+.. +..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~--~~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM--KMY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh--cCC
Confidence 6431 1 1 24699999998 67899999999876544321 233445556788899999997533221 123
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.+||||||||++|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|+|+++||++ .+.+..|+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dr 231 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDK 231 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCE
Confidence 4679999999999999999999999999999999999999999999998765 899999999986 44556677
No 287
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.8e-31 Score=297.29 Aligned_cols=200 Identities=22% Similarity=0.306 Sum_probs=159.8
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+. .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899988763 23599999999999999999999999999999999996431 12479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 123567899999988887 899999988654321 1122334556788888888753 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|++. .+.+..|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~ 214 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDK 214 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCE
Confidence 35799999999999999999999999999999999999999999999985 4799999999975 45556666
No 288
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=3.3e-32 Score=295.28 Aligned_cols=183 Identities=27% Similarity=0.388 Sum_probs=151.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV--PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~--~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.+.....+..
T Consensus 27 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 103 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIP 103 (211)
T ss_pred cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCC
Confidence 47999999999999999999999887 999999998765321 2467999999999899999999998864322100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+....++++++.+||++..++. +..|||||||||+||||
T Consensus 104 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~a 144 (211)
T cd03264 104 ----------------------------------SKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRRRVGIAQA 144 (211)
T ss_pred ----------------------------------HHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHHHHHHHHH
Confidence 000112356778889997655544 45799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
|+.+|++++|||||+|||+.++..+.+.++++.+ + +++++++|+.+.+.+++|++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 3 56777899999999999999999999998765
No 289
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.98 E-value=4.1e-32 Score=313.58 Aligned_cols=191 Identities=23% Similarity=0.281 Sum_probs=158.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCc----cCCCCc------c-cceEEEeccccccCCCCCHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGH----GMDEFV------P-QRTAAYISQHDVHIGEMTVRETLA 69 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~----~~~~~~------~-~~~i~yv~Q~~~~~~~lTv~e~l~ 69 (1247)
+++|+||||||||||+++|+|+++|+ +|+|.++|+ ++.... . ++.++||+|++.+++.+||+||+.
T Consensus 52 i~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~ 128 (382)
T TIGR03415 52 ICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVA 128 (382)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHH
Confidence 47999999999999999999999987 999999996 332211 1 247999999999999999999999
Q ss_pred HHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000867 70 FSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQ 149 (1247)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1247)
++....+.. + .+.+..++++++.+||++..+. .+..|||||
T Consensus 129 ~~~~~~g~~----------~------------------------~~~~~~a~e~le~vgL~~~~~~-----~~~~LSgGq 169 (382)
T TIGR03415 129 FGLEMQGMP----------E------------------------AERRKRVDEQLELVGLAQWADK-----KPGELSGGM 169 (382)
T ss_pred HHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHH
Confidence 975432210 0 0112235678999999765554 455799999
Q ss_pred cchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 150 rqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
||||+|||||+.+|+|+||||||+|||+.++.++.+.|+++.+. .+++|++++|+.+++.+++|+|++|++|+++..|+
T Consensus 170 ~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~-~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~ 248 (382)
T TIGR03415 170 QQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK-LNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGT 248 (382)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999987653 35677779999999999999999999999999999
Q ss_pred cchHH
Q 000867 230 RELVL 234 (1247)
Q Consensus 230 ~~~~~ 234 (1247)
++++.
T Consensus 249 ~~ei~ 253 (382)
T TIGR03415 249 PEEIV 253 (382)
T ss_pred HHHHh
Confidence 88775
No 290
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.4e-32 Score=308.24 Aligned_cols=191 Identities=21% Similarity=0.299 Sum_probs=155.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDV-HIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1247)
+++|+||||||||||+++|+|+.+|+ +|+|.++|+++... ..++.++||+|++. .+...||+||+.|+.
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~ 111 (290)
T PRK13634 35 YVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGP 111 (290)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHH
Confidence 47999999999999999999999987 99999999987421 12357999999852 344579999999865
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCccccccccccc
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1247)
...+.. ..+.+..++++++.+||. ...+ +.+..|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~q 152 (290)
T PRK13634 112 MNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLA-----RSPFELSGGQMR 152 (290)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhh-----CCcccCCHHHHH
Confidence 321100 001122457789999996 3344 445679999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+. .+++|++++|+.+++...||+|++|++|++++.|+++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987653 3567777999999999999999999999999999988
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 232 ~~~ 234 (290)
T PRK13634 232 EIF 234 (290)
T ss_pred HHh
Confidence 764
No 291
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.5e-31 Score=298.03 Aligned_cols=203 Identities=20% Similarity=0.266 Sum_probs=158.4
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eEEEEEEEcCcc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISGYP 755 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g~~ 755 (1247)
+++|+++.++ .+.+|+|+||++++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4677776653 2459999999999999999999999999999999999753 11 247999999987
Q ss_pred CCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000867 756 KKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1247)
Q Consensus 756 ~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 830 (1247)
+.. ...++.++|++|++.+++. |++||+.+....+. .....+..++.++++++.+|+.+...+... .....|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhhC
Confidence 532 1245678999999888875 99999987643321 111223344567889999999652211111 123579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 831 SgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+..|+
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~ 217 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDR 217 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCE
Confidence 9999999999999999999999999999999999999999999985 4899999999986 45556676
No 292
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=99.98 E-value=3.5e-32 Score=312.36 Aligned_cols=188 Identities=27% Similarity=0.336 Sum_probs=156.9
Q ss_pred EeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCCccc
Q 000867 4 LLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYD 82 (1247)
Q Consensus 4 ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~ 82 (1247)
|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.|+.+..+..
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~---~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~---- 73 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPD---SGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVP---- 73 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCC----
Confidence 68999999999999999999987 999999998875432 2467999999999999999999999975432100
Q ss_pred hhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHhcC
Q 000867 83 MLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMVGP 162 (1247)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~~~ 162 (1247)
+ .+.+..++++++.+||++..+ +.+..|||||||||+|||||+.+
T Consensus 74 ------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgGq~qRvalaraL~~~ 118 (325)
T TIGR01187 74 ------R------------------------AEIKPRVLEALRLVQLEEFAD-----RKPHQLSGGQQQRVALARALVFK 118 (325)
T ss_pred ------H------------------------HHHHHHHHHHHHHcCCcchhc-----CChhhCCHHHHHHHHHHHHHHhC
Confidence 0 011123567889999976544 44568999999999999999999
Q ss_pred CeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 163 ALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 163 p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+..++..++|+|++|++|+++..|+++++.
T Consensus 119 p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~-~g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~ 189 (325)
T TIGR01187 119 PKILLLDEPLSALDKKLRDQMQLELKTIQEQ-LGITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIY 189 (325)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999987654 3556677899999999999999999999999999988764
No 293
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.6e-31 Score=297.71 Aligned_cols=200 Identities=22% Similarity=0.260 Sum_probs=160.8
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
-++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 477889887763 235999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++ .|++||+.|...... ....+..+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 88642 123566899999998887 899999987654321 1122334456788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~ 215 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDY 215 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCE
Confidence 357999999999999999999999999999999999999999999999865 689999999985 55666777
No 294
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.98 E-value=1.2e-31 Score=300.77 Aligned_cols=209 Identities=19% Similarity=0.232 Sum_probs=164.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++++..+.. ....+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 3789999987742110 0000124699999999999999999999999999999999998763 479999999876
Q ss_pred Ccc---cccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCC
Q 000867 757 KQE---TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGESGL 830 (1247)
Q Consensus 757 ~~~---~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~l 830 (1247)
... ..++.++|++|++. +++.+|+.|++.+....+. .......++.++++++.+|+. +..+..+ ..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYP-----HML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhc
Confidence 421 22356899999975 5678899999987654332 222334445688999999994 4555543 469
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 831 SgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~ 219 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQ 219 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999999998764 899999999985 45556676
No 295
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.1e-31 Score=311.43 Aligned_cols=175 Identities=24% Similarity=0.363 Sum_probs=151.9
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCcCH
Q 000867 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998653 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgL 860 (1247)
+||+.|... ...+++++++++.+||.+..+..+ +.||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345789999999988777765 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+.++..+.+.|+++.++ |+|+|+++|++. ++..+.|+
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~ 198 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADR 198 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCE
Confidence 999999999999998765 899999999985 56677777
No 296
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.1e-31 Score=302.51 Aligned_cols=201 Identities=23% Similarity=0.287 Sum_probs=164.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++.. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47899998876410 12359999999999999999999999999999999999876 3479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQ---ETFTRISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
.. ...++.+||++|++. .++..||.||+.+..... ....+...++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998764322 1233444456889999999987776654 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++..- ...|+
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~--~~~d~ 209 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEA--ASSDR 209 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH--HhCCE
Confidence 9999999999999999999999999999999999999999998765 89999999998753 23566
No 297
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.98 E-value=7.8e-32 Score=295.97 Aligned_cols=186 Identities=25% Similarity=0.307 Sum_probs=151.5
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--eEEEEEEEcCccCCcccc-cceEEEeccCCC--CCCCcC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-TRISGYCEQNDI--HSPFVT 779 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~~~v~q~~~--~~~~lt 779 (1247)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 579999999999999999999999999999999986531 147999999988654322 357899999974 557789
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc---cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000867 780 VYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP---LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1247)
Q Consensus 780 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEp 856 (1247)
+.|++.+...... . ..+..+++++++++.+++.+ ..+..+ +.||||||||++|||+|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999876543221 1 12333456889999999973 344443 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 857 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+|||..+...+.+.|+++.++ |+|||+++|+++ ++....|+
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 195 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADE 195 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999998764 899999999986 45566676
No 298
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-31 Score=297.96 Aligned_cols=200 Identities=28% Similarity=0.338 Sum_probs=159.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 753 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999988763 2359999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87632 123567999999998887 899999987643321 1122333456778899998753 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||||+.+|++|+|||||+|||..++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 216 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDR 216 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999864 689999999986 46666776
No 299
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.98 E-value=4.5e-32 Score=315.20 Aligned_cols=189 Identities=24% Similarity=0.390 Sum_probs=157.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.|+..
T Consensus 25 i~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 101 (354)
T TIGR02142 25 VTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMK 101 (354)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhh
Confidence 47999999999999999999999987 99999999886421 124679999999999999999999998643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
... . .+.+..++++++.+||.+..+ +.+..|||||||||
T Consensus 102 ~~~------------~------------------------~~~~~~~~~~l~~~gL~~~~~-----~~~~~LSgGqkqRv 140 (354)
T TIGR02142 102 RAR------------P------------------------SERRISFERVIELLGIGHLLG-----RLPGRLSGGEKQRV 140 (354)
T ss_pred ccC------------h------------------------hHHHHHHHHHHHHcCChhHhc-----CChhhCCHHHHHHH
Confidence 110 0 001123567889999976554 44567999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..++|++++|++|+++..|+++++
T Consensus 141 alAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 141 AIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999999999999999999997653 355677789999999999999999999999999998876
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 220 ~ 220 (354)
T TIGR02142 220 W 220 (354)
T ss_pred h
Confidence 4
No 300
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.98 E-value=1.1e-31 Score=311.84 Aligned_cols=179 Identities=24% Similarity=0.359 Sum_probs=153.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCcCH
Q 000867 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 89999999999999999999999999999998653 47999999987632 1235679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgL 860 (1247)
+||+.|..... .....+++++++++.+||.+..+..+ +.||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12233456889999999988777765 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~ 201 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADR 201 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999998765 899999999986 46666777
No 301
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.98 E-value=3.4e-32 Score=297.24 Aligned_cols=188 Identities=30% Similarity=0.429 Sum_probs=154.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~ 106 (220)
T cd03263 30 IFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLP 106 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999876432 22457999999988888999999998864322100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
. .+....++++++.+||.+..++. +..||||||||++||||
T Consensus 107 ----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~a 147 (220)
T cd03263 107 ----------K------------------------SEIKEEVELLLRVLGLTDKANKR-----ARTLSGGMKRKLSLAIA 147 (220)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCCHHHHhCh-----hhhCCHHHHHHHHHHHH
Confidence 0 00112356678889997665544 45799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
|+.+|++++|||||+|||+.++.++.+.|+++.+ + .++++++|+.+.+.+.+|++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998743 3 6677789999999999999999999999999987653
No 302
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.3e-31 Score=304.74 Aligned_cols=210 Identities=24% Similarity=0.247 Sum_probs=166.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|.... .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 588999998774221000 001124699999999999999999999999999999999998653 479999999886
Q ss_pred Ccc------cccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCC
Q 000867 757 KQE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGE 827 (1247)
Q Consensus 757 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 827 (1247)
... .+++.++||+|++ .+.|.+|+.+++........ ....++.++++.++++.+||.+ ..+..+
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~p----- 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRYP----- 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCCC-----
Confidence 431 2456799999997 58889999999876543321 2234455667899999999963 445543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||||+.+|++|++||||++||..++..+++.|+++.++ |.|+|++||+.+ .+.+.-|+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adr 224 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADE 224 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999998764 899999999985 34445566
No 303
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.98 E-value=2.9e-32 Score=341.41 Aligned_cols=192 Identities=24% Similarity=0.333 Sum_probs=150.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.+||+||||||||||+++|+|++ |. +|+|.+||.++++.. .++.++||+|++.+|. .|++|||.++..-
T Consensus 378 ~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~~~--- 449 (588)
T PRK11174 378 RIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGNPD--- 449 (588)
T ss_pred EEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCCCC---
Confidence 37999999999999999999999 76 899999999886543 3578999999988775 5999999985210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
.. .++..+++... ..++.+ -.|+++.||.||++ +.+||||||||++|||
T Consensus 450 ---------~~-------------~eei~~al~~a------~l~~~i--~~lp~G~dT~vge~-G~~LSGGQrQRialAR 498 (588)
T PRK11174 450 ---------AS-------------DEQLQQALENA------WVSEFL--PLLPQGLDTPIGDQ-AAGLSVGQAQRLALAR 498 (588)
T ss_pred ---------CC-------------HHHHHHHHHHh------CHHHHH--HhcccccccccccC-CCCCCHHHHHHHHHHH
Confidence 00 00111111000 011222 24788899999976 4579999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||+++|+|++||||||+||+.++..|.+.+++.. . ++|+++++|.. +....+|+|++|++|++++.|+++++.+
T Consensus 499 All~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~-~~TvIiItHrl-~~i~~aD~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 499 ALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--R-RQTTLMVTHQL-EDLAQWDQIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--C-CCEEEEEecCh-HHHHhCCEEEEEeCCeEeecCCHHHHHh
Confidence 9999999999999999999999999999998763 2 34445566666 4567799999999999999999998864
No 304
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.9e-31 Score=298.47 Aligned_cols=204 Identities=21% Similarity=0.277 Sum_probs=160.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 753 (1247)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 488999988763 2359999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.+... ...++.+||++|++.+++. |++||+.+....+. ....++.+++++++++.+++.+...... +...+
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l-~~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRL-HTQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhh-hCCcc
Confidence 87642 1335678999999888875 99999987643321 1123334456778899999854211111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|+++|++. .+.+..|+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~ 223 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQ 223 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 799999999986 45556676
No 305
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=5.4e-32 Score=300.21 Aligned_cols=198 Identities=25% Similarity=0.355 Sum_probs=156.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 105 (241)
T cd03256 29 FVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLG 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcc
Confidence 47999999999999999999999886 999999998875432 245799999998888989999999875321
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.. .... ... .. ......+.++++++.+||.+..+ +.+..|||||||||+
T Consensus 106 ~~--~~~~---~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~ 154 (241)
T cd03256 106 RR--STWR---SLF------GL---------------FPKEEKQRALAALERVGLLDKAY-----QRADQLSGGQQQRVA 154 (241)
T ss_pred cc--hhhh---hhc------cc---------------CcHHHHHHHHHHHHHcCChhhhC-----CCcccCCHHHHHHHH
Confidence 00 0000 000 00 00011223566788899975444 345679999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..++|++++|++|++++.|+++++
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 155 IARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 999999999999999999999999999999999987653 355677789999999999999999999999999988765
No 306
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.98 E-value=3.6e-32 Score=296.68 Aligned_cols=184 Identities=31% Similarity=0.424 Sum_probs=151.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+|+||||||||+++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 109 (218)
T cd03266 33 VTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLK 109 (218)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCC
Confidence 37999999999999999999999887 99999999877532 22467999999998889899999998754321100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+....++++++.+||.+..+. .+..||||||||++||||
T Consensus 110 ----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~lara 150 (218)
T cd03266 110 ----------------------------------GDELTARLEELADRLGMEELLDR-----RVGGFSTGMRQKVAIARA 150 (218)
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCCHHHHhh-----hhhhcCHHHHHHHHHHHH
Confidence 00112235678899999765544 455799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
++.+|++++|||||+|||+.++..+.+.|+++.+ . +.++++++|+..++.+.+|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998754 3 556777899999999999999999999998754
No 307
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=301.04 Aligned_cols=203 Identities=24% Similarity=0.390 Sum_probs=159.8
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 588999988763 124599999999999999999999999999999999998653 479999999876
Q ss_pred CcccccceEEEeccCCCCC--CCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 757 KQETFTRISGYCEQNDIHS--PFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~--~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
.....++.++|++|++.+. ...+++|++.+....... ........++.++++++.+||.+..++.++ .||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIG-----ELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcc-----cCCHH
Confidence 4322234689999997653 234788887653210000 011112234457789999999887777654 69999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++|||||+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~ 211 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDY 211 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998777899999999985 34455565
No 308
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=99.98 E-value=1.2e-30 Score=340.57 Aligned_cols=118 Identities=23% Similarity=0.276 Sum_probs=92.8
Q ss_pred CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCc
Q 000867 774 HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-RQSLVGLPGESGLSTEQRKRLTIAVELV---ANPS 849 (1247)
Q Consensus 774 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGqr~r~~ia~~l~---~~p~ 849 (1247)
.+...||.|+|.++..-........++..+++ ++++.+||.+. .+... ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999877542211111223344455 57889999775 45554 469999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 850 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 850 il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+++|||||+|||..+...+++.|+++.++|.|||+++|++.. + +..|+
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDr 880 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADY 880 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCE
Confidence 999999999999999999999999998889999999999963 3 77777
No 309
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.5e-31 Score=296.12 Aligned_cols=204 Identities=22% Similarity=0.291 Sum_probs=160.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 377899987763 235999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+... ....+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~ 145 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGT 145 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChh
Confidence 87642 123567899999998887 899999987653321 1122334455788899998864211111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++|+|||||+|||..++..+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 146 ~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~ 214 (250)
T PRK14262 146 RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADY 214 (250)
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 789999999986 35556666
No 310
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.1e-32 Score=309.23 Aligned_cols=189 Identities=23% Similarity=0.384 Sum_probs=153.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------------------cccceEEEecccc--ccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------------------VPQRTAAYISQHD--VHI 59 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------------------~~~~~i~yv~Q~~--~~~ 59 (1247)
+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... ..++.++||+|++ .++
T Consensus 54 ~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~ 130 (320)
T PRK13631 54 IYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF 130 (320)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhccc
Confidence 47999999999999999999999987 99999999876431 1246799999986 455
Q ss_pred CCCCHHHHHHHHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcc-ccccccc
Q 000867 60 GEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVG 138 (1247)
Q Consensus 60 ~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg 138 (1247)
+ .||+||+.|+....+.. ..+....++++++.+||+. ..
T Consensus 131 ~-~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~----- 170 (320)
T PRK13631 131 K-DTIEKDIMFGPVALGVK----------------------------------KSEAKKLAKFYLNKMGLDDSYL----- 170 (320)
T ss_pred c-chHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHh-----
Confidence 4 59999998864321100 0011223567788899962 22
Q ss_pred CCccccccccccchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEE
Q 000867 139 DEMVRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIIL 218 (1247)
Q Consensus 139 ~~~~~~LSGGqrqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~ 218 (1247)
++.+.+|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.. .+++|++++|+.+++...||+|++
T Consensus 171 ~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 171 ERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred cCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEE
Confidence 345668999999999999999999999999999999999999999999998754 356677789999999999999999
Q ss_pred ecCCcEEEecCcchHH
Q 000867 219 LSDAQIVYQGPRELVL 234 (1247)
Q Consensus 219 l~~G~v~~~G~~~~~~ 234 (1247)
|++|++++.|+++++.
T Consensus 249 l~~G~i~~~g~~~~~~ 264 (320)
T PRK13631 249 MDKGKILKTGTPYEIF 264 (320)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 311
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=5.6e-32 Score=299.66 Aligned_cols=191 Identities=25% Similarity=0.369 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 105 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKW 105 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999886 999999998765322 245799999999899899999999886432210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcc--cccccccCCccccccccccchhHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV--CDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
+ ..+....+.++++.+||+. .. ++.+.+|||||||||+|
T Consensus 106 ----~------------------------------~~~~~~~~~~~l~~l~l~~~~~~-----~~~~~~LS~G~~qrv~l 146 (242)
T cd03295 106 ----P------------------------------KEKIRERADELLALVGLDPAEFA-----DRYPHELSGGQQQRVGV 146 (242)
T ss_pred ----C------------------------------HHHHHHHHHHHHHHcCCCcHHHH-----hcChhhCCHHHHHHHHH
Confidence 0 0001123566788899974 22 34566899999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++...+|+|++|++|++++.|+++++.
T Consensus 147 aral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 147 ARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999999987653 3566777899998999999999999999999999876653
No 312
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.3e-31 Score=297.51 Aligned_cols=200 Identities=22% Similarity=0.304 Sum_probs=160.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-e--EEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~-~--~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 578999988763 235999999999999999999999999999999999975422 1 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+....++.++++++.+++.+ ..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87632 223457899999998887 899999987654331 1122333456778899988843 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~ 218 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDF 218 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCe
Confidence 357999999999999999999999999999999999999999999999864 689999999986 45555665
No 313
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.5e-31 Score=305.98 Aligned_cols=208 Identities=16% Similarity=0.196 Sum_probs=162.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CeEEEEEEEcCc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGY 754 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~--~~~~G~i~i~g~ 754 (1247)
-++++|+++.+... .+...+|+|||++|++||++||+|+||||||||+++|+|..+. ...+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 37889998877421 1234699999999999999999999999999999999997642 235799999998
Q ss_pred cCCcc---c----ccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCC---CCHHHHHHHHHHHHHHcCCCccc---c
Q 000867 755 PKKQE---T----FTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPE---VDSETQKMFIEEIMELVELNPLR---Q 819 (1247)
Q Consensus 755 ~~~~~---~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~---~~~~~~~~~v~~~l~~l~l~~~~---~ 819 (1247)
++... . +++.++||+|++. +.|.+||.+++........... ....+.++++.++++.+||.+.. +
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76431 1 1346899999975 5788999999975422110000 11123445688999999997532 3
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhh
Q 000867 820 SLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFD 898 (1247)
Q Consensus 820 ~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd 898 (1247)
.. +..|||||||||+||+||+.+|++|++||||+|||+.++..+.+.|+++.++ |.|||++||+.+ .+.+..|
T Consensus 154 ~~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SF-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CC-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 33 3579999999999999999999999999999999999999999999998764 899999999985 3445566
Q ss_pred c
Q 000867 899 E 899 (1247)
Q Consensus 899 ~ 899 (1247)
+
T Consensus 228 r 228 (330)
T PRK15093 228 K 228 (330)
T ss_pred E
Confidence 6
No 314
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=99.98 E-value=4.9e-32 Score=293.16 Aligned_cols=180 Identities=25% Similarity=0.354 Sum_probs=149.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-cccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|..+|. +|+|.++|+++... ..++.++|++|++.+++.+||+||+.+.......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~-- 102 (208)
T cd03268 28 IYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI-- 102 (208)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC--
Confidence 47899999999999999999999886 99999999876432 2245799999998889899999999886432100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
.+..++++++.++|.+..+. .+..|||||||||+||||+
T Consensus 103 ------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~la~al 141 (208)
T cd03268 103 ------------------------------------RKKRIDEVLDVVGLKDSAKK-----KVKGFSLGMKQRLGIALAL 141 (208)
T ss_pred ------------------------------------cHHHHHHHHHHcCCHHHHhh-----hHhhCCHHHHHHHHHHHHH
Confidence 01124567888888765544 4557999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
+.+|++++|||||+|||+.++..+.+.+++..+ . +.++++++|+.+++...+|++++|++|++++.|
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 142 LGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999998754 3 456777899999999999999999999998765
No 315
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=99.98 E-value=1.3e-31 Score=327.80 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=166.9
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-++++|++++++ ++.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEC
Confidence 378899988763 24599999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
... ..++.++|++|++.+++.+||+|++.+....+.. ...+.+..+++++++++.+|+.+..+..++ .||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVG-----ELS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCC
Confidence 421 1235689999999899999999999886432211 112233344568899999999887777654 699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++. ++-+..|+
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~ 210 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDD 210 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998777899999999985 35556676
No 316
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=99.98 E-value=4.1e-32 Score=296.24 Aligned_cols=180 Identities=25% Similarity=0.355 Sum_probs=146.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-------ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-------PQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 108 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLL 108 (218)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHh
Confidence 47999999999999999999999887 999999998875422 13579999999988999999999998654
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+.. . .+.+..++++++.+||.+..+ +.++.|||||||||
T Consensus 109 ~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 149 (218)
T cd03255 109 LAGVP----------K------------------------KERRERAEELLERVGLGDRLN-----HYPSELSGGQQQRV 149 (218)
T ss_pred hcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhh-----cChhhcCHHHHHHH
Confidence 32100 0 001123567888999976544 34557999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcE
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v 224 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++. .||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999999999999987653 3556777888888876 9999999999974
No 317
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.98 E-value=5.2e-32 Score=296.38 Aligned_cols=187 Identities=22% Similarity=0.384 Sum_probs=151.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|+.+|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~ 104 (222)
T cd03224 28 IVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR 104 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC
Confidence 47999999999999999999999987 999999998765432 13569999999989999999999988643210
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHh-CCcccccccccCCccccccccccchhHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVL-GLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
. . +....++.+++.+ ++++..+ +.+..||||||||++|
T Consensus 105 ---~----~-----------------------------~~~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrv~l 143 (222)
T cd03224 105 ---R----A-----------------------------KRKARLERVYELFPRLKERRK-----QLAGTLSGGEQQMLAI 143 (222)
T ss_pred ---c----h-----------------------------hHHHHHHHHHHHHHhhhhhhh-----CchhhCCHHHHHHHHH
Confidence 0 0 0011133445555 3554333 3455799999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
||||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|++++|+.+++.+.+|++++|++|++++.|+.+++
T Consensus 144 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (222)
T cd03224 144 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAEL 219 (222)
T ss_pred HHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999998754 356677789999999999999999999999999987664
No 318
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.5e-31 Score=290.56 Aligned_cols=178 Identities=24% Similarity=0.344 Sum_probs=149.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCcCH
Q 000867 708 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 708 ~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
|+|+++++ |+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998653 47999999987531 1234578999999999989999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgL 860 (1247)
+||+.+..... ..+..+++++++++.+|+.+..+..+ +.||||||||++||++|+.+|++++|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 22334456788999999987666654 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 861 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 861 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+.++..+.+.|++++++ |+|||+++|++.. +-+..|+
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~~~~~d~ 201 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLSE-AEYLADR 201 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHHH-HHHhcCE
Confidence 999999999999998765 8999999999853 3344554
No 319
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.98 E-value=3.9e-32 Score=293.12 Aligned_cols=177 Identities=27% Similarity=0.343 Sum_probs=145.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccc-cCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDV-HIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+|||||||||||++|+|..+|+ +|+|.++|.++.....++.++|++|++. .+..+||+||+.++.....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~--- 101 (205)
T cd03226 28 IIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD--- 101 (205)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcC---
Confidence 47999999999999999999999887 9999999987654333467999999864 3456799999987532110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
.....++++++.+||.+..++ .+..||||||||++|||||
T Consensus 102 -----------------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~laral 141 (205)
T cd03226 102 -----------------------------------AGNEQAETVLKDLDLYALKER-----HPLSLSGGQKQRLAIAAAL 141 (205)
T ss_pred -----------------------------------ccHHHHHHHHHHcCCchhcCC-----CchhCCHHHHHHHHHHHHH
Confidence 001124667889999765554 4457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEE
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~ 225 (1247)
+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.+++|++++|++|+++
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 142 LSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999999998754 3 556777899999999999999999999874
No 320
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.98 E-value=6.8e-32 Score=309.29 Aligned_cols=194 Identities=21% Similarity=0.219 Sum_probs=158.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1247)
+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.... .++.++||+|++ .+++.+||.|||.+..
T Consensus 49 ~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l 125 (331)
T PRK15079 49 TLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 125 (331)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999886 999999999875432 245799999996 5788999999998864
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccch
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKR 152 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1247)
...... . ...+.+..++++++.+||.. .+.++.+..||||||||
T Consensus 126 ~~~~~~--------~------------------------~~~~~~~~~~~~l~~vgl~~----~~~~~~p~~LSgG~~QR 169 (331)
T PRK15079 126 RTYHPK--------L------------------------SRQEVKDRVKAMMLKVGLLP----NLINRYPHEFSGGQCQR 169 (331)
T ss_pred HHhccC--------C------------------------CHHHHHHHHHHHHHHcCCCh----HHhcCCcccCCHHHHHH
Confidence 321100 0 00112234567889999942 12345677899999999
Q ss_pred hHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 153 vsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
|+|||||+.+|+++++||||+|||..++.++++.|+++.+. .+.++++++|+...+.+++|+|++|++|++++.|+.++
T Consensus 170 v~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~ 248 (331)
T PRK15079 170 IGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDE 248 (331)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999999999999999999987653 35677789999999999999999999999999999887
Q ss_pred HH
Q 000867 233 VL 234 (1247)
Q Consensus 233 ~~ 234 (1247)
+.
T Consensus 249 i~ 250 (331)
T PRK15079 249 VY 250 (331)
T ss_pred HH
Confidence 65
No 321
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.7e-32 Score=307.76 Aligned_cols=190 Identities=22% Similarity=0.311 Sum_probs=153.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCC---------------------------CcccceEEEec
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE---------------------------FVPQRTAAYIS 53 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~---------------------------~~~~~~i~yv~ 53 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+... ...++.+|||+
T Consensus 35 ~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 35 FIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 47999999999999999999999987 8999999875421 11246799999
Q ss_pred ccc-ccCCCCCHHHHHHHHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-c
Q 000867 54 QHD-VHIGEMTVRETLAFSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-V 131 (1247)
Q Consensus 54 Q~~-~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~ 131 (1247)
|++ ..+...||+|||.|+....+.. .++....++++++.+||+ +
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAKKRAAKYIELVGLDES 157 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChh
Confidence 985 3444579999999875422110 011122456788999996 3
Q ss_pred cccccccCCccccccccccchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHh
Q 000867 132 CDDTLVGDEMVRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYD 211 (1247)
Q Consensus 132 ~~~t~vg~~~~~~LSGGqrqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~ 211 (1247)
..+ +.+..|||||||||+|||+|+.+|++++|||||+|||+.++..+++.++++.+ . +.+|++++|+.+.+.+
T Consensus 158 ~~~-----~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 158 YLQ-----RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-GKTIILVTHDLDNVLE 230 (305)
T ss_pred hhh-----CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeeCHHHHHH
Confidence 333 45668999999999999999999999999999999999999999999998753 3 5667779999999999
Q ss_pred hcccEEEecCCcEEEecCcchHH
Q 000867 212 LFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 212 ~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
.||+|++|++|++++.|+++++.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988864
No 322
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.98 E-value=5.2e-32 Score=315.28 Aligned_cols=194 Identities=24% Similarity=0.397 Sum_probs=159.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||||+|+|.++|. +|+|.++|+++.... .++.++||+|++.+++.+||+||+.++..-..
T Consensus 31 iv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~- 106 (402)
T PRK09536 31 LVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHR- 106 (402)
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhc-
Confidence 47999999999999999999999987 999999998875432 24679999999988899999999998532100
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
.++.. . ..+.++.+++.++.+||.+..+. .++.|||||||||+|||
T Consensus 107 -~~~~~---~-------------------------~~~~~~~v~~~le~vgl~~~~~~-----~~~~LSgGerQRv~IAr 152 (402)
T PRK09536 107 -SRFDT---W-------------------------TETDRAAVERAMERTGVAQFADR-----PVTSLSGGERQRVLLAR 152 (402)
T ss_pred -ccccC---C-------------------------CHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHHH
Confidence 00000 0 00112346778999999766554 45679999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||+++|++++|||||+|||+.++.++++.|+++++ . +++|++++|+.+++.++||++++|++|++++.|+++++.
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999865 3 456777899999999999999999999999999988754
No 323
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.5e-32 Score=302.32 Aligned_cols=189 Identities=24% Similarity=0.297 Sum_probs=154.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++..||.||+.|+....+
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 109 (274)
T PRK13647 33 KTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMG 109 (274)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcC
Confidence 47999999999999999999999987 999999998875432 2357999999863 4556899999998643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. ..+.+..++.+++.+||.+..+. .+..|||||||||+||
T Consensus 110 ~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~-----~~~~LSgG~~qrv~la 150 (274)
T PRK13647 110 LD----------------------------------KDEVERRVEEALKAVRMWDFRDK-----PPYHLSYGQKKRVAIA 150 (274)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCCHHHhcC-----ChhhCCHHHHHHHHHH
Confidence 00 00112235678889999765544 4557999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
|||+.+|++++|||||+|||+.++.++.+.+++++. . +.+|++++|+.+.+.+.||++++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999998764 3 56677789999999999999999999999999987653
No 324
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.3e-31 Score=297.17 Aligned_cols=206 Identities=22% Similarity=0.263 Sum_probs=161.8
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEE
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITI 751 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i 751 (1247)
...++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|..+. .+.+|+|.+
T Consensus 23 ~~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i 89 (272)
T PRK14236 23 QTALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRL 89 (272)
T ss_pred CcEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEE
Confidence 34689999998763 23599999999999999999999999999999999998542 135899999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCC
Q 000867 752 SGYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPG 826 (1247)
Q Consensus 752 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 826 (1247)
+|.+... ...++.++|++|++.+++. |++||+.+....+. ....+..++.++++++.+++.+....... ..
T Consensus 90 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 165 (272)
T PRK14236 90 DGQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLH-EN 165 (272)
T ss_pred CCEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhh-CC
Confidence 9987642 1345678999999988886 99999987653321 11222334567888998888642111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 166 ~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~ 236 (272)
T PRK14236 166 AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDY 236 (272)
T ss_pred cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCE
Confidence 357999999999999999999999999999999999999999999999865 789999999985 34455666
No 325
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=99.97 E-value=1.4e-30 Score=328.60 Aligned_cols=102 Identities=19% Similarity=0.285 Sum_probs=86.7
Q ss_pred HHHHhCCccc-ccccccCCccccccccccchhHHHHHHhcCC--eEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEE
Q 000867 123 YLKVLGLEVC-DDTLVGDEMVRGISGGQKKRVTTGEMMVGPA--LALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAV 199 (1247)
Q Consensus 123 ~l~~lgL~~~-~~t~vg~~~~~~LSGGqrqRvsiA~al~~~p--~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~i 199 (1247)
.|+.+||.+. . ++.+.+|||||||||.||++|..+| ++++|||||+|||+..+.++++.|+++.+ .+.+|
T Consensus 472 ~L~~vGL~~l~l-----~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~--~G~TV 544 (943)
T PRK00349 472 FLVDVGLDYLTL-----SRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRD--LGNTL 544 (943)
T ss_pred HhhccccCCCCC-----CCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHh--CCCEE
Confidence 5788888643 3 3556689999999999999999987 99999999999999999999999999854 35567
Q ss_pred EEecCCChhHHhhcccEEEe------cCCcEEEecCcch
Q 000867 200 ISLLQPAPETYDLFDDIILL------SDAQIVYQGPREL 232 (1247)
Q Consensus 200 v~~~~~~~~~~~~~D~v~~l------~~G~v~~~G~~~~ 232 (1247)
++++|+.+++. .+|+|++| ++|++++.|++++
T Consensus 545 IvVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv~~g~~~e 582 (943)
T PRK00349 545 IVVEHDEDTIR-AADYIVDIGPGAGVHGGEVVASGTPEE 582 (943)
T ss_pred EEEeCCHHHHH-hCCEEEEeccccCCCCCEEeeccCHHH
Confidence 77899888765 69999999 8999999886654
No 326
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.3e-31 Score=294.79 Aligned_cols=201 Identities=24% Similarity=0.284 Sum_probs=159.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCe---EEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~---~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467888887763 2359999999999999999999999999999999999754322 379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1335578999999999999999999987643221 1122333455667777777642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 216 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDT 216 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999864 799999999986 35555666
No 327
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.3e-31 Score=295.03 Aligned_cols=204 Identities=24% Similarity=0.279 Sum_probs=159.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467888887663 245999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000867 754 YPKKQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1247)
Q Consensus 754 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 829 (1247)
.++.. ...++.++|++|++.+++ .|+.||+.+...... ....+..++++.++++.+++.+....... .....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCccc
Confidence 87631 234567899999998887 899999987643221 11223334567788888887542111111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~ 213 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDR 213 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999865 589999999985 45566676
No 328
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.8e-31 Score=293.91 Aligned_cols=204 Identities=20% Similarity=0.248 Sum_probs=158.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 477899987763 235999999999999999999999999999999999976532 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ...++.++|++|++.+++. |++||+.+....+.. . ..+..++.++++++.+++.+..+... +....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT-T-AQSRLDEVVEKSLRQAALWDEVKDNL-HKSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC-C-hhhHHHHHHHHHHHHhCCchhhhhHh-hCCcc
Confidence 87532 1345679999999988875 999999886543211 1 12223445677888888754211111 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++. +-+..|+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~~-~~~~~d~ 215 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQQ-AARASDW 215 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHHH-HHhhCCE
Confidence 799999999999999999999999999999999999999999999884 58999999999853 3344455
No 329
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4e-31 Score=297.28 Aligned_cols=204 Identities=23% Similarity=0.288 Sum_probs=162.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 753 (1247)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 588999998874 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCC
Q 000867 754 YPKKQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESG 829 (1247)
Q Consensus 754 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 829 (1247)
.++.. ...++.++|++|++.+++ .|++||+.+..... ...+.++.++.+.++++.+++.+..+.... ...+.
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 134567899999998888 89999998764322 112333444456788899998653221111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 830 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 830 lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dr 231 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDR 231 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999865 589999999985 45566676
No 330
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.97 E-value=1e-31 Score=301.64 Aligned_cols=192 Identities=20% Similarity=0.328 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++.... .++.++|++|++.+++.+||.||+.++...
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~ 111 (269)
T PRK11831 35 ITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLRE 111 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHH
Confidence 47999999999999999999999886 999999998765321 235699999998888889999999885321
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.. ..+ . .+.+..++++++.+||.+..+.. +..|||||||||+
T Consensus 112 ~~---~~~------~------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrv~ 153 (269)
T PRK11831 112 HT---QLP------A------------------------PLLHSTVMMKLEAVGLRGAAKLM-----PSELSGGMARRAA 153 (269)
T ss_pred cc---CCC------H------------------------HHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHH
Confidence 10 000 0 00112345678899997655543 4579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999987653 3566777899999999999999999999999999887654
No 331
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.97 E-value=1.2e-31 Score=293.03 Aligned_cols=197 Identities=26% Similarity=0.405 Sum_probs=156.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 68 (220)
T cd03245 2 RIEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDI 68 (220)
T ss_pred eEEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEh
Confidence 3678888876531 124599999999999999999999999999999999998653 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccccccc------CCCC
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVG------LPGE 827 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~ 827 (1247)
.. ...++.++|++|++.+++ .|+.|++.+... ... ++.+.++++.+++.+..+.... ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 69 RQLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred HHCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 32 223457899999998876 699999876421 111 1235677888888776555431 1123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++.. + +..|+
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~-~-~~~d~ 207 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL-L-DLVDR 207 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH-H-HhCCE
Confidence 579999999999999999999999999999999999999999999998654 899999999863 3 56666
No 332
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.97 E-value=7.1e-32 Score=299.51 Aligned_cols=198 Identities=23% Similarity=0.300 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 106 (243)
T TIGR02315 30 FVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLG 106 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccc
Confidence 47999999999999999999999886 999999998765321 245799999998889999999999874311
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.. ..+. ... . ....+....++++++.+||.+..+ +.+..|||||||||+
T Consensus 107 ~~--~~~~---~~~---------~------------~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~ 155 (243)
T TIGR02315 107 YK--PTWR---SLL---------G------------RFSEEDKERALSALERVGLADKAY-----QRADQLSGGQQQRVA 155 (243)
T ss_pred cc--cchh---hhh---------c------------cccHHHHHHHHHHHHHcCcHhhhc-----CCcccCCHHHHHHHH
Confidence 00 0000 000 0 000011223567788899975444 345679999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+.+.++||++++|++|++++.|+++++
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999999987653 356677789999999999999999999999999987664
No 333
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.4e-31 Score=281.45 Aligned_cols=163 Identities=30% Similarity=0.412 Sum_probs=139.8
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+++|+|+++++||+++|+||||||||||+++|+|..+. .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5677776653 23599999999999999999999999999999999998653 48999999987643
Q ss_pred -----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 000867 759 -----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTE 833 (1247)
Q Consensus 759 -----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 833 (1247)
...++.++|++|++.+++.+|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999987532 8999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 834 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 834 qr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. .+.+..|+
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 170 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADR 170 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998876 899999999985 33344554
No 334
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.4e-31 Score=294.80 Aligned_cols=186 Identities=23% Similarity=0.300 Sum_probs=150.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.+...
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 37 MMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 47999999999999999999999887 9999999988754321 2469999999888889999999998643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+. . . .+.++.++++++.+||++..+. .+.+||||||||+
T Consensus 114 ~~~~----~------~------------------------~~~~~~~~~~l~~~gl~~~~~~-----~~~~LSgG~~qrl 154 (233)
T PRK11629 114 IGKK----K------P------------------------AEINSRALEMLAAVGLEHRANH-----RPSELSGGERQRV 154 (233)
T ss_pred hcCC----C------H------------------------HHHHHHHHHHHHHcCCchhhhC-----ChhhCCHHHHHHH
Confidence 2110 0 0 0111235678899999765543 4557999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
+||||++.+|++++|||||+|||+.++..+.+.++++.+. ++++|++++|+.+++.. +|++++|++|++++.|+.
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 155 AIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEEEECCEEEEEecc
Confidence 9999999999999999999999999999999999987543 35667778888888766 589999999999988864
No 335
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.97 E-value=4.5e-31 Score=294.30 Aligned_cols=199 Identities=21% Similarity=0.275 Sum_probs=158.3
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--eEEEEEEEcC
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISG 753 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~--~~~G~i~i~g 753 (1247)
..++++|+++.++ +.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3588999987752 24999999999999999999999999999999999986531 1579999999
Q ss_pred ccCCcccc-cceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc---ccccccCCCC
Q 000867 754 YPKKQETF-TRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL---RQSLVGLPGE 827 (1247)
Q Consensus 754 ~~~~~~~~-~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~~g~~~~ 827 (1247)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .+++++++++.+++.+. .++.+
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~~----- 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLYP----- 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcCC-----
Confidence 88653322 356899999974 4466899998866433221 111 22567889999999762 34433
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++.. +.+..|+
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~-~~~~~d~ 210 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGV-VARLADD 210 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHH-HHHhCCE
Confidence 479999999999999999999999999999999999999999999998764 8999999999863 3344555
No 336
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.7e-31 Score=297.90 Aligned_cols=199 Identities=24% Similarity=0.294 Sum_probs=160.1
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~ 752 (1247)
..++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..+. .+.+|+|.++
T Consensus 38 ~~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~ 104 (285)
T PRK14254 38 TVIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFR 104 (285)
T ss_pred ceEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEEC
Confidence 3588999988763 23599999999999999999999999999999999997542 1247999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g 823 (1247)
|.++.. ...++.++|++|++.+++. |++||+.+....+. ... ..+++++++++.+++.+ ..+..
T Consensus 105 G~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~-- 177 (285)
T PRK14254 105 GKNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS-- 177 (285)
T ss_pred CEEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC--
Confidence 987532 2345678999999888875 99999987654331 112 23456788999999853 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|+||+|||||+|||..+...+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 178 ---~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dr 248 (285)
T PRK14254 178 ---GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDK 248 (285)
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCE
Confidence 357999999999999999999999999999999999999999999999876 489999999985 34445565
No 337
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=302.28 Aligned_cols=190 Identities=21% Similarity=0.311 Sum_probs=154.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. .++..||+|||.|+....+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 35 WLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 47999999999999999999999987 999999998875422 2457999999863 6777899999998643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. ..+....++++++.+||++..+. .+..||||||||++||
T Consensus 112 ~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 112 IP----------------------------------HEEMKERVNEALELVGMQDFKER-----EPARLSGGQKQRVAIA 152 (279)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHCCCHhHhhC-----CcccCCHHHHHHHHHH
Confidence 00 00112235678899999765543 4557999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+++.++++.+. .+++|++++|+.+++ ..||++++|++|+++..|+++++.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999988653 356677788888887 589999999999999999987764
No 338
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=9.5e-32 Score=341.96 Aligned_cols=194 Identities=29% Similarity=0.383 Sum_probs=162.4
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++. +++++|+|+|++|+|||++||+|+||||||||+|+|+|..++ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 47999999999841 224699999999999999999999999999999999998763 48999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..|+.+. .|+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 456788999999999886 59999998642 1 22 2346677888777653 35666643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++ ++|+|+++|+++ ..+.+|+
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~ 653 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADR 653 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCE
Confidence 4689999999999999999999999999999999999999999999876 589999999984 4566777
No 339
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.97 E-value=1.6e-31 Score=294.80 Aligned_cols=190 Identities=25% Similarity=0.366 Sum_probs=153.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV--PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~--~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... ..+.++|++|++.+++.+|++||+.+.....+..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~ 105 (236)
T TIGR03864 29 FVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLS 105 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCC
Confidence 47999999999999999999999887 999999998764322 2257999999988888999999998754321100
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
. .+....++++++.+||++..++. +..||||||||++||||
T Consensus 106 ----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 106 ----------R------------------------AEARERIAALLARLGLAERADDK-----VRELNGGHRRRVEIARA 146 (236)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHHHHHHHHHH
Confidence 0 00112356678889997655544 45799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|+.+|++++|||||+|||+.++..+.+.|+++++. .+.++++++|+.+++.. +|++++|++|++++.|+++++.
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~ 220 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELR 220 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999999999987643 35567778898888865 9999999999999999887664
No 340
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.5e-31 Score=326.44 Aligned_cols=202 Identities=26% Similarity=0.302 Sum_probs=165.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 478899988763 24599999999999999999999999999999999998653 479999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCcCHHHHHHHHhhcc--C-CC-CCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 757 KQET----FTRISGYCEQNDIHSPFVTVYESLLYSAWLR--L-PP-EVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 757 ~~~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~--~-~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.... .++.++|++|++.+++.+||+|++.+..... . .. ..+.++.+++++++++.+||.+..++.++
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~----- 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVA----- 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchh-----
Confidence 4321 2346899999999999999999998753210 0 00 01233345668899999999887777664
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~ 214 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDR 214 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 69999999999999999999999999999999999999999999999877999999999975 34455666
No 341
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.1e-31 Score=293.75 Aligned_cols=205 Identities=21% Similarity=0.270 Sum_probs=162.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.+. +..+|+|+||++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 588999998763 135999999999999999999999999999999999976531 1369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ...++.++|++|+..+++ .|+.||+.+...... .....+.++++.++++.+++.+..+.... ....
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87531 233566899999988888 899999987643221 11223334567889999998542221111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++++|||||+|||..+...+.+.|+++++ +|+|||+++|++. ++.+..|+
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~ 220 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDF 220 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCE
Confidence 7999999999999999999999999999999999999999999999764 4899999999985 46667777
No 342
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.9e-32 Score=305.80 Aligned_cols=196 Identities=25% Similarity=0.372 Sum_probs=163.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|++++++.+ ..++|+|+|+++++||++||+|+||||||||++.|+|..++ .+|+|..||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~--~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDP--QQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCC--CCCeeeECCcCh
Confidence 78999999998632 34699999999999999999999999999999999997653 489999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCC
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPG 826 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~ 826 (1247)
.. ...++.++++.|...++. -|+|+||..+. ++.+ ++.+.++++.+||++.... .+| ++
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lg-e~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLG-EG 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhc-cC
Confidence 43 335667899999887765 59999997652 2333 3447889999999875433 454 35
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.||||||||++|||+|++|.++++|||||.|||+.|.+++++.+.+.+ +|+|+|++||+... .+.||+
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~-~~kTll~vTHrL~~--le~~dr 541 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA-EGKTLLMVTHRLRG--LERMDR 541 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh-cCCeEEEEeccccc--HhhcCE
Confidence 67899999999999999999999999999999999999999999998876 48999999999753 456776
No 343
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.5e-31 Score=293.63 Aligned_cols=200 Identities=25% Similarity=0.316 Sum_probs=159.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 753 (1247)
.++++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999988763 2359999999999999999999999999999999999764 11 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.+... ...++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87632 123567899999988886 799999987643221 1122333456778899999853 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|++. .+.+..|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~ 215 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK-HQYTFIMVTHNLQ-QAGRISDQ 215 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH-cCCeEEEEECCHH-HHHhhcCE
Confidence 35799999999999999999999999999999999999999999999985 4689999999986 34455566
No 344
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=2.3e-31 Score=333.32 Aligned_cols=196 Identities=21% Similarity=0.319 Sum_probs=163.8
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++. ++++|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46999999998741 23599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccc-------cccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR-------QSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~g~~ 825 (1247)
+++ ..+++.++||+|++.+++. |++||+.++. +.+ +++++++++.+|+.+.. |+.+|.
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e- 472 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGE- 472 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccC-
Confidence 753 4567889999999999985 9999998752 122 23467788888876533 555654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
.+.+||||||||++|||||+++|+||+||||||+||+++++.+.+.|+++.+ ++|+|+++|++ +....+|+.
T Consensus 473 ~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~--~~l~~~D~i 544 (592)
T PRK10790 473 QGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRL--STIVEADTI 544 (592)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecch--HHHHhCCEE
Confidence 3457999999999999999999999999999999999999999999998754 69999999999 445667773
No 345
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.97 E-value=1.3e-31 Score=298.66 Aligned_cols=191 Identities=23% Similarity=0.313 Sum_probs=154.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-----------cccceEEEeccccccCCCCCHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----------VPQRTAAYISQHDVHIGEMTVRETLA 69 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-----------~~~~~i~yv~Q~~~~~~~lTv~e~l~ 69 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~ 107 (250)
T PRK11264 31 VVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENII 107 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHH
Confidence 47999999999999999999999886 99999999876421 12457999999988888899999998
Q ss_pred HHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000867 70 FSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQ 149 (1247)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1247)
++..... +. . ..+....++++++.+||.+..++ .+..|||||
T Consensus 108 ~~~~~~~-~~--~------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~Gq 149 (250)
T PRK11264 108 EGPVIVK-GE--P------------------------------KEEATARARELLAKVGLAGKETS-----YPRRLSGGQ 149 (250)
T ss_pred HHHHHhc-CC--C------------------------------HHHHHHHHHHHHHHcCCcchhhC-----ChhhCChHH
Confidence 7532100 00 0 00112235667888999765443 456799999
Q ss_pred cchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 150 rqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
||||+|||||+.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++.+++|++++|++|++++.|+
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998754 2 4567778999999999999999999999999998
Q ss_pred cchHH
Q 000867 230 RELVL 234 (1247)
Q Consensus 230 ~~~~~ 234 (1247)
.+++.
T Consensus 228 ~~~~~ 232 (250)
T PRK11264 228 AKALF 232 (250)
T ss_pred HHHHh
Confidence 77653
No 346
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.97 E-value=2.6e-31 Score=296.43 Aligned_cols=195 Identities=21% Similarity=0.308 Sum_probs=158.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++. +...+|+|+|++|++||+++|+||||||||||+++|+|..+ .+|+|.+||.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999988741 12359999999999999999999999999999999999875 269999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccC------CCC
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGL------PGE 827 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~------~~~ 827 (1247)
.. ...++.++|++|++.+++ .|++||+.... ... ++.+.++++.+||.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234567999999999987 49999995321 111 23467788889997665554431 234
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. +++|||+++|++. .+. ..|+
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~-~~dr 205 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AML-ECQR 205 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HHH-hCCE
Confidence 5799999999999999999999999999999999999999999999874 5899999999984 343 4676
No 347
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=99.97 E-value=4.3e-31 Score=323.91 Aligned_cols=203 Identities=23% Similarity=0.339 Sum_probs=164.3
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24599999999999999999999999999999999997653224799999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCC
Q 000867 758 QET----FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETQKMFIEEIMELVELNPLR-QSLVGLPGESGLS 831 (1247)
Q Consensus 758 ~~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~lS 831 (1247)
... .++.+||++|++.+++.+||+|++.+........ ....+..+++++++++.+++.+.. +..+ +.||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 321 2356899999998899999999998764322111 122333455688999999997654 3434 4699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||||+||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~ 210 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDT 210 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998878999999999985 34455676
No 348
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=3.1e-30 Score=280.28 Aligned_cols=178 Identities=20% Similarity=0.296 Sum_probs=138.3
Q ss_pred CCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcC
Q 000867 674 EPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 753 (1247)
Q Consensus 674 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g 753 (1247)
.|..+-++|++|.++ +.++++++++|-|.--..++|+||||.||||||+.|.|...+ ..|+..-|
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc-
Confidence 345677888888764 346799999999999999999999999999999999998763 35554322
Q ss_pred ccCCcccccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCC
Q 000867 754 YPKKQETFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLS 831 (1247)
Q Consensus 754 ~~~~~~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 831 (1247)
.+-.+|+..|.. .+-..-|+-|.|.-.. .+ +.+. ....|-.+||...++++- .+.||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F--Nl----pyq~----ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRKF--NL----PYQE----ARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHhc--CC----ChHH----HHHHhhhhhhhhccceEe----eeecC
Confidence 123578877753 2334567777764321 12 2221 345788899998888873 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
||||-||++|..-++.|+||||||||++||.++...+.+.|++. ...||+++|+.+
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeR 762 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDER 762 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccc
Confidence 99999999999999999999999999999999999999999875 357999999875
No 349
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.97 E-value=1.5e-31 Score=293.81 Aligned_cols=194 Identities=23% Similarity=0.255 Sum_probs=155.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCC----CCceeeEEEECCccCCCCcc-cceEEEeccccc--cCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDS----KLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDV--HIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~----~~~~~G~v~~~g~~~~~~~~-~~~i~yv~Q~~~--~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+| + +|+|.++|+++..... ++.++|++|++. +.+.+|++||+.+...
T Consensus 14 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~ 90 (230)
T TIGR02770 14 VLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLR 90 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHH
Confidence 4799999999999999999999987 5 8999999988754332 257999999974 5567899999987543
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+.. . .+.+..++++++.+||++. +...++.+..|||||||||
T Consensus 91 ~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~LS~G~~qrv 134 (230)
T TIGR02770 91 SLGKL---------S-------------------------KQARALILEALEAVGLPDP--EEVLKKYPFQLSGGMLQRV 134 (230)
T ss_pred HcCcc---------H-------------------------HHHHHHHHHHHHHcCCCch--HHHHhCChhhcCHHHHHHH
Confidence 21100 0 0112235678899999742 1122445668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+||||++.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++...+|++++|++|+++..|+++++
T Consensus 135 ~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 213 (230)
T TIGR02770 135 MIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEI 213 (230)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987543 356677789999999999999999999999999988776
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 214 ~ 214 (230)
T TIGR02770 214 F 214 (230)
T ss_pred H
Confidence 4
No 350
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.6e-31 Score=324.02 Aligned_cols=202 Identities=28% Similarity=0.345 Sum_probs=166.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 478899988763 23599999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
... .+++.+||++|++.+++.+||+||+.+....+........+.+++++++++.+|+.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 421 234568999999989999999999987532111111123344566889999999987666654 46999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~ 209 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDA 209 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998877999999999986 34455666
No 351
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.4e-31 Score=296.15 Aligned_cols=200 Identities=22% Similarity=0.270 Sum_probs=158.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998763 2359999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1235678999999988875 99999987643221 1112233455777888888852 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~ 232 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDR 232 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999864 689999999985 35556666
No 352
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.9e-31 Score=297.51 Aligned_cols=200 Identities=21% Similarity=0.275 Sum_probs=158.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999988763 1359999999999999999999999999999999999632 1 02479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. .+....++++.++++.+|+. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988875 999999886533211 12233345677888888874 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++.. +.+..|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~~-~~~~~d~ 250 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQQ-ASRVSDY 250 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHH-HHHhCCE
Confidence 357999999999999999999999999999999999999999999998864 6899999999863 4455666
No 353
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.2e-31 Score=293.39 Aligned_cols=204 Identities=25% Similarity=0.277 Sum_probs=159.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988763 235999999999999999999999999999999999964311 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+...... +...+
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRL-HDSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHh-hcChh
Confidence 87642 2335678999999988874 999999987543321 122333456778888888753211111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++.. +.+..|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~~-~~~~~d~ 217 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQQ-AARVSDY 217 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHHH-HHhhCCE
Confidence 7999999999999999999999999999999999999999999999865 6899999999853 4455565
No 354
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.97 E-value=1.4e-31 Score=293.66 Aligned_cols=189 Identities=23% Similarity=0.274 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+.++..... . .
T Consensus 13 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~~~~~~~~-~-~ 85 (230)
T TIGR01184 13 FISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIALAVDRVL-P-D 85 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHHHHHHhcc-c-C
Confidence 47999999999999999999999887 9999999988754322 35899999988998999999988532100 0 0
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
.. ..+.+..++++++.+||++..++. +..||||||||++|||||+
T Consensus 86 ------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~ 130 (230)
T TIGR01184 86 ------LS------------------------KSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALS 130 (230)
T ss_pred ------CC------------------------HHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHH
Confidence 00 001122356678889997655443 4579999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
.+|++++|||||+|||+.++..+.+.++++.+. .+.+|++++|+.+++.+.+|++++|++|+++..|+..+
T Consensus 131 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 201 (230)
T TIGR01184 131 IRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILE 201 (230)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCcee
Confidence 999999999999999999999999999987653 35567778999999999999999999999999886544
No 355
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.3e-31 Score=290.57 Aligned_cols=185 Identities=23% Similarity=0.348 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 26 ~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--- 99 (211)
T cd03298 26 ITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--- 99 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhccccccc---
Confidence 47999999999999999999999887 999999998775422 24679999999988888999999987532100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
. .. .+.+..++++++.+||.+..++ .+..||||||||++||||+
T Consensus 100 --~----~~-------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 100 --K----LT-------------------------AEDRQAIEVALARVGLAGLEKR-----LPGELSGGERQRVALARVL 143 (211)
T ss_pred --C----cc-------------------------HHHHHHHHHHHHHcCCHHHHhC-----CcccCCHHHHHHHHHHHHH
Confidence 0 00 0011235667888999765554 3457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
+.+|++++|||||+|||+.++..+.+.++++.+. .+.+|++++|+..++.+++|++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999987643 3566777899999999999999999999998654
No 356
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.97 E-value=5.4e-31 Score=294.58 Aligned_cols=200 Identities=24% Similarity=0.259 Sum_probs=158.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc-
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 755 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~- 755 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 478999988763 23599999999999999999999999999999999998653 47999999987
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000867 756 ----KKQE---T----FTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSL 821 (1247)
Q Consensus 756 ----~~~~---~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 821 (1247)
+... . .++.++|++|+.. +.+.+|+.|++.+..... . .......++.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAV-G-ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 567789999987643211 1 1112233456788999999964 44544
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 822 ~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+ ..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++.. +.+..|+
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~-~~~~~d~ 221 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAV-ARLLAHR 221 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHH-HHHhcCE
Confidence 3 479999999999999999999999999999999999999999999998764 8999999999853 3334555
No 357
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=1.3e-31 Score=296.49 Aligned_cols=190 Identities=19% Similarity=0.314 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHhc-
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSARC- 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~- 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 105 (240)
T PRK09493 29 VVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999887 99999999886532 1245799999998888889999999875321
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+. + ..+....++++++.+||++..+. .+..||||||||++
T Consensus 106 ~~~----~------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~qrv~ 146 (240)
T PRK09493 106 RGA----S------------------------------KEEAEKQARELLAKVGLAERAHH-----YPSELSGGQQQRVA 146 (240)
T ss_pred cCC----C------------------------------HHHHHHHHHHHHHHcCChHHHhc-----ChhhcCHHHHHHHH
Confidence 000 0 00111235678888999755443 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||||++.+|++++|||||+|||+.++..+.+.++++.+ . +++|++++|+.+++...||++++|++|++++.|+.+++.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999999999999998754 3 456777899999999999999999999999999877654
No 358
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8e-31 Score=292.64 Aligned_cols=203 Identities=18% Similarity=0.213 Sum_probs=160.7
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--C-eEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~--~-~~~G~i~i~ 752 (1247)
..+..+++++.+. ++.+|+|+|++++|||+++|+|+||||||||+++|+|..++ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 4567777776542 34699999999999999999999999999999999997642 1 257999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGE 827 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 827 (1247)
|.++.. ..+++.++|++|++.++ .+|++||+.+....+. . ....++.++++++.+++.+..+...+ ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987632 13456789999998877 5999999988754331 1 12234567889999998643222221 224
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+..|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~ 217 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADT 217 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 5799999999999999999999999999999999999999999999985 4799999999986 35566676
No 359
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.9e-31 Score=289.74 Aligned_cols=183 Identities=27% Similarity=0.392 Sum_probs=150.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+...
T Consensus 25 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~ 101 (214)
T cd03297 25 VTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLK 101 (214)
T ss_pred eEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHh
Confidence 47999999999999999999999887 99999999876421 124579999999988889999999987532
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
.. . . ...+..++++++.+||++..+ +.+..||||||||+
T Consensus 102 ~~------~------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 140 (214)
T cd03297 102 RK------R------N------------------------REDRISVDELLDLLGLDHLLN-----RYPAQLSGGEKQRV 140 (214)
T ss_pred hC------C------H------------------------HHHHHHHHHHHHHcCCHhHhh-----cCcccCCHHHHHHH
Confidence 10 0 0 001123456788899875444 34567999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
+||||++.+|++++|||||+|||+.++..+.+.++++++. .+++|++++|+.+++...+|++++|++|++++.|
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 141 ALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999999987653 2556777899999999999999999999998765
No 360
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.1e-31 Score=303.84 Aligned_cols=190 Identities=18% Similarity=0.250 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEecccc--ccCCCCCHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHD--VHIGEMTVRETLAFS 71 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .+++ .||.||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~ 110 (286)
T PRK13646 35 YYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFG 110 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhh
Confidence 47999999999999999999999987 99999999887431 1246799999985 3444 5999999986
Q ss_pred HhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCcccccccccc
Q 000867 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1247)
....+.. ..+....++++++.+||. +..+ +.+..||||||
T Consensus 111 ~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~ 151 (286)
T PRK13646 111 PKNFKMN----------------------------------LDEVKNYAHRLLMDLGFSRDVMS-----QSPFQMSGGQM 151 (286)
T ss_pred HHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhh-----CCcccCCHHHH
Confidence 4321100 001122356788899996 3444 44568999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
|||+|||||+.+|++++|||||+|||+.++.++.+.++++.+. .+++|++++|+.+++.+.+|+|++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987543 456777799999999999999999999999999998
Q ss_pred chHH
Q 000867 231 ELVL 234 (1247)
Q Consensus 231 ~~~~ 234 (1247)
+++.
T Consensus 231 ~~~~ 234 (286)
T PRK13646 231 KELF 234 (286)
T ss_pred HHHH
Confidence 7764
No 361
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=99.97 E-value=7e-31 Score=293.08 Aligned_cols=198 Identities=24% Similarity=0.310 Sum_probs=157.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|++++|||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 488999987763 2359999999999999999999999999999999999621113579999999876
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCcCHHHHHHHHhhccCC----CCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCC
Q 000867 757 KQE---TFTR-ISGYCEQNDIHSPFVTVYESLLYSAWLRLP----PEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGE 827 (1247)
Q Consensus 757 ~~~---~~~~-~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 827 (1247)
... ..++ .++|++|++.+++.+|+.|++.+....... ......+..+++.++++.+|+. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 378999999999999999998765432110 1112223345678889999996 34454432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
..||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++.++|+|||+++|++..
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~ 213 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL 213 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 2499999999999999999999999999999999999999999999987778999999999764
No 362
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.97 E-value=1.8e-31 Score=306.05 Aligned_cols=198 Identities=20% Similarity=0.209 Sum_probs=160.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLAFS 71 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~--~~~~~lTv~e~l~f~ 71 (1247)
+++|+|+||||||||+++|+|+++|....+|+|.++|+++..... ++.++||+|++ .+.+.+|+.+++.+.
T Consensus 44 ~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~ 123 (330)
T PRK09473 44 TLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 123 (330)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH
Confidence 479999999999999999999998742348999999998754321 14799999997 678899999999875
Q ss_pred HhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccc
Q 000867 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrq 151 (1247)
...... . ...+....+.++++.+||++..+. + ++.+.+|||||||
T Consensus 124 ~~~~~~---------~------------------------~~~~~~~~~~~~L~~vgL~~~~~~-~-~~~p~~LSgG~~Q 168 (330)
T PRK09473 124 LMLHKG---------M------------------------SKAEAFEESVRMLDAVKMPEARKR-M-KMYPHEFSGGMRQ 168 (330)
T ss_pred HHHhcC---------C------------------------CHHHHHHHHHHHHHHcCCCChHHH-h-cCCcccCCHHHHH
Confidence 432110 0 001112345677889999754322 2 4677899999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
||+|||||+.+|+++++||||+|||+.++.++++.|+++.+. .++++++++|+...+.+++|+|++|++|++++.|+.+
T Consensus 169 Rv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 169 RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998653 3667778999999999999999999999999999988
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 248 ~i~ 250 (330)
T PRK09473 248 DVF 250 (330)
T ss_pred HHH
Confidence 875
No 363
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=99.97 E-value=4.7e-31 Score=287.95 Aligned_cols=179 Identities=27% Similarity=0.340 Sum_probs=145.5
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCcCH
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSPFVTV 780 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 780 (1247)
+++++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 34679999999999999999999999999999999999865 348999999976431 1112334567999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000867 781 YESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 860 (1247)
Q Consensus 781 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgL 860 (1247)
+||+.+....+ ..+.+..+++++++++.+++.+..++.+ +.||||||||++|||+|+.+|++++|||||+||
T Consensus 102 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99998765432 1223344456788999999988777765 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 861 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 861 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|+.++..+.+.|+++.++|+|||+++|++.. +-+..|+
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~~-~~~~~d~ 211 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPSS-IKRLCDR 211 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHHhCCE
Confidence 9999999999999987778999999999852 3334454
No 364
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.97 E-value=1.1e-31 Score=296.72 Aligned_cols=194 Identities=25% Similarity=0.392 Sum_probs=147.2
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHh
Confidence 56787776531 124599999999999999999999999999999999998653 47999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHH-----HHHHHHHHHc--CCCccccccccCCCCC
Q 000867 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQK-----MFIEEIMELV--ELNPLRQSLVGLPGES 828 (1247)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 828 (1247)
...++.++|++|++.+++ .||+||+.+... ....+... ...+++++.+ ++.+..+.. .+
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567899999987765 699999976421 11111111 0112333333 333333332 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|++++ +|+|||+++|++.. + +..|+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~ 205 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADR 205 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCE
Confidence 799999999999999999999999999999999999999999999986 48999999999964 3 34565
No 365
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=8.6e-32 Score=335.18 Aligned_cols=197 Identities=30% Similarity=0.464 Sum_probs=161.8
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
...++|+|+++.++. ++++|+|+|++++|||++||+||||||||||++.|.|..++ .+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCE
Confidence 356999999999852 35699999999999999999999999999999999998763 4899999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCC-------CccccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVEL-------NPLRQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l-------~~~~~~~~g~ 824 (1247)
+++. ..+++.++||+|++.++. -|++||+.++. + +.++++ ++++++..++ .+-.|+.+|
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vg- 460 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATDEE----IEEALKLANAHEFIANLPDGYDTIVG- 460 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCHHH----HHHHHHHhChHHHHHhCcccccceec-
Confidence 8754 456788999999999998 79999998763 1 223333 3444443332 234688888
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+++..||||||||++||||++++|+||+||||||+||+++...+++.++++. +++|+|+++|+++. ....|+
T Consensus 461 e~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~ 532 (567)
T COG1132 461 ERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADR 532 (567)
T ss_pred CCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCE
Confidence 4456899999999999999999999999999999999999999999999776 57899999999953 233666
No 366
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=99.97 E-value=5e-31 Score=322.88 Aligned_cols=195 Identities=22% Similarity=0.314 Sum_probs=164.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999998763 23599999999999999999999999999999999998653 479999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 000867 757 KQE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLST 832 (1247)
Q Consensus 757 ~~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 832 (1247)
... . .++.+||++|++.+++.+||+|++.+... . ....+++++++++.+||.+..+..++ .|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSAG-----SLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCChh-----hCCH
Confidence 431 1 22458999999999999999999987531 1 12334567889999999887777654 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 833 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 833 Gqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++.. +.+..|+
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~-~~~~~d~ 209 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPE-IRQLADR 209 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhCCE
Confidence 99999999999999999999999999999999999999999988779999999999863 4456676
No 367
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=3.3e-31 Score=331.80 Aligned_cols=199 Identities=24% Similarity=0.291 Sum_probs=163.8
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++|+++. +.+++|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999998741 124699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~ 825 (1247)
.++ ..+++.++|++|++.+++ -|++||+.++. +.+.+. ++++++++..|+.+ -.|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 346778999999999887 69999997642 212222 34666777776543 246677653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
++.||||||||++|||||+++|+||+||||||+||++++..+.+.|+++. +++|+|+++|+++ ..+.+|+.
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~I 548 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEI 548 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEE
Confidence 46799999999999999999999999999999999999999999999874 4799999999994 56778873
No 368
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.1e-31 Score=300.06 Aligned_cols=190 Identities=25% Similarity=0.341 Sum_probs=155.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.... .++.++|++|++. .++..||.|||.++....+
T Consensus 35 ~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~ 111 (279)
T PRK13635 35 WVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIG 111 (279)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCC
Confidence 47999999999999999999999987 999999999875432 2457999999863 6777899999988643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. ..+.++.++++++.+||.+..++. +..|||||||||+||
T Consensus 112 ~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS~G~~qrv~la 152 (279)
T PRK13635 112 VP----------------------------------REEMVERVDQALRQVGMEDFLNRE-----PHRLSGGQKQRVAIA 152 (279)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCChhhhhCC-----cccCCHHHHHHHHHH
Confidence 00 001122356788889997655544 457999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++. .+|++++|++|++++.|+.+++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999987653 3567777888888876 59999999999999999987765
No 369
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.97 E-value=3.9e-31 Score=279.21 Aligned_cols=152 Identities=26% Similarity=0.428 Sum_probs=132.4
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQND---IHSPF 777 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 777 (1247)
+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 89999999999999999999999999999999998663 479999999876432 2356789999984 57788
Q ss_pred cCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000867 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEpt 857 (1247)
+|++||+.+... ||||||||++|||||+.+|++++|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999875320 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 858 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|||+.++..+.+.|+++.++|+|+|+++|+++ ++-+..|+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~ 173 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDR 173 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999998767899999999974 45455555
No 370
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1e-30 Score=291.71 Aligned_cols=200 Identities=26% Similarity=0.339 Sum_probs=157.7
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 753 (1247)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478999988763 2359999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 824 (1247)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87632 234567999999988888 6999999876543211 112222345667788887742 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|||+++|++. .+.+..|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~ 216 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDK 216 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999865 589999999985 35555666
No 371
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.97 E-value=1.8e-31 Score=290.18 Aligned_cols=179 Identities=26% Similarity=0.367 Sum_probs=146.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (214)
T TIGR02673 30 FLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEV 106 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999886 999999998875421 245799999999888889999999986432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+. . .+..+..++++++.+||.+..++ .+..|||||||||+
T Consensus 107 ~~~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~ 147 (214)
T TIGR02673 107 RGK----K------------------------------EREIQRRVGAALRQVGLEHKADA-----FPEQLSGGEQQRVA 147 (214)
T ss_pred cCC----C------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHHHHHH
Confidence 210 0 00011235667888998754443 34579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCc
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~ 223 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+ . +.+|++++|+.+++..+||++++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999998754 3 4567778999999999999999999985
No 372
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.97 E-value=1.8e-31 Score=290.45 Aligned_cols=180 Identities=24% Similarity=0.355 Sum_probs=147.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~ 105 (214)
T cd03292 29 FVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEV 105 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998775421 245799999999899999999999886432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. .++....++++++.+||++..++ .+.+||||||||++
T Consensus 106 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 146 (214)
T cd03292 106 TGVP----------------------------------PREIRKRVPAALELVGLSHKHRA-----LPAELSGGEQQRVA 146 (214)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhC-----ChhhcCHHHHHHHH
Confidence 2100 00011234667888898765544 34579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcE
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v 224 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+ . ++++++++|+.+.+.+++|++++|++|++
T Consensus 147 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 147 IARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998754 3 55677789999999999999999999974
No 373
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.1e-31 Score=301.68 Aligned_cols=190 Identities=23% Similarity=0.319 Sum_probs=153.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDV-HIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+..+||+||+.|+.
T Consensus 35 ~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 35 FVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 47999999999999999999999987 99999999876431 12357999999862 333679999998864
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCccccccccccc
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1247)
...... .++....++++++.+||. +..+ +.++.|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~~LSgGq~q 152 (287)
T PRK13641 112 KNFGFS----------------------------------EDEAKEKALKWLKKVGLSEDLIS-----KSPFELSGGQMR 152 (287)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhh-----CCcccCCHHHHH
Confidence 321100 001122356788999995 3333 445679999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|++++|+.+.+.+.||++++|++|++++.|+++
T Consensus 153 rl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 153 RVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998743 3667777999999999999999999999999999887
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 231 ~~~ 233 (287)
T PRK13641 231 EIF 233 (287)
T ss_pred HHh
Confidence 754
No 374
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.97 E-value=8.9e-31 Score=293.70 Aligned_cols=208 Identities=25% Similarity=0.301 Sum_probs=161.7
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.+.... ..+ ...++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888887763100 000 0012569999999999999999999999999999999999765 35899999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000867 758 QE------TFTRISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1247)
Q Consensus 758 ~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 828 (1247)
.. ..++.++|++|+. .+.+..|+.|++.+..... .........+.++++++.+|+. +..+..+ +
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 31 2356799999997 3567799999987643211 1123344455688999999996 4555543 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++|+|||||+|||..+...+.+.|+++.++ |+|||+++|++. .+-+..|+
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~ 221 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQR 221 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCE
Confidence 69999999999999999999999999999999999999999999998764 899999999985 34445565
No 375
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=2.3e-31 Score=330.54 Aligned_cols=197 Identities=27% Similarity=0.438 Sum_probs=164.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 57999999998741 124699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccc------cccccCCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLR------QSLVGLPG 826 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~------~~~~g~~~ 826 (1247)
+.+ ..+++.++||+|++.+++ -|++||+.++. + +. .++.++++++..++.+.. |+.+|. +
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge-~ 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGE-G 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcC-C
Confidence 654 356778999999998886 59999997752 1 22 234477888888887653 455654 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 827 ESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 827 ~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+..||||||||++|||||+++|++|+||||||+||++++..+.+.|++.. +++|+|+++|+++. ...+|+
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~ 542 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDR 542 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCE
Confidence 46799999999999999999999999999999999999999999999875 58999999999963 345776
No 376
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=294.73 Aligned_cols=191 Identities=19% Similarity=0.326 Sum_probs=155.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+..+...
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 107 (241)
T PRK10895 31 IVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD 107 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc
Confidence 47999999999999999999999887 999999998875422 23579999999888888999999987532210
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. .+ ..+.+..++++++.+||.+..+ +.++.|||||||||+||
T Consensus 108 ~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 108 D---LS------------------------------AEQREDRANELMEEFHIEHLRD-----SMGQSLSGGERRRVEIA 149 (241)
T ss_pred c---cC------------------------------HHHHHHHHHHHHHHcCCHHHhh-----cchhhCCHHHHHHHHHH
Confidence 0 00 0011223567788889875433 44568999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+.+.++++.+ .+.++++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 999999999999999999999999999999988753 3556777889989999999999999999999999887653
No 377
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.7e-31 Score=300.10 Aligned_cols=191 Identities=25% Similarity=0.324 Sum_probs=155.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCC--C---cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE--F---VPQRTAAYISQHDV-HIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~--~---~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+...||+||+.++...
T Consensus 34 ~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 110 (283)
T PRK13636 34 VTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVN 110 (283)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHH
Confidence 47999999999999999999999987 9999999988741 1 12467999999863 34567999999886432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. ..+....++++++.+||.+..+ +.++.||||||||++
T Consensus 111 ~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~-----~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 111 LKLP----------------------------------EDEVRKRVDNALKRTGIEHLKD-----KPTHCLSFGQKKRVA 151 (283)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHCCChhhhh-----CCcccCCHHHHHHHH
Confidence 1100 0011223567889999976544 455679999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++..+||++++|++|++++.|+.+++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988653 3566777899999999999999999999999999988765
No 378
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=99.97 E-value=1.1e-30 Score=291.03 Aligned_cols=197 Identities=28% Similarity=0.331 Sum_probs=152.5
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788887763 23599999999999999999999999999999999997421135799999998764
Q ss_pred cc---c-ccceEEEeccCCCCCCCcCHHHHHHHHhh-ccC--CCC-CCHHHHHHHHHHHHHHcCCC-ccccccccCCCCC
Q 000867 758 QE---T-FTRISGYCEQNDIHSPFVTVYESLLYSAW-LRL--PPE-VDSETQKMFIEEIMELVELN-PLRQSLVGLPGES 828 (1247)
Q Consensus 758 ~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-~~~--~~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 828 (1247)
.. . .++.++|++|++.+++.+|+.+++.+... ++. ... ......++.++++++.+++. +..+..+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 21 1 22458999999988888887776643211 110 000 11122345677888999984 34444331 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
.||||||||++|||||+.+|++|+|||||+|||..+...+.+.|+++.++|+|||+++|++..
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~ 207 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI 207 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 699999999999999999999999999999999999999999999987778999999999763
No 379
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.97 E-value=1.9e-31 Score=329.94 Aligned_cols=197 Identities=29% Similarity=0.457 Sum_probs=162.4
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++. .++++|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 319 ~~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~I~~~g~~ 385 (529)
T TIGR02857 319 PSLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDP--TEGSIAVNGVP 385 (529)
T ss_pred CeEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999998741 124699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+.+ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+. .|+.+|.
T Consensus 386 i~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e- 454 (529)
T TIGR02857 386 LADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR----P-DAS----DAEIRRALERAGLDEFVAALPQGLDTLIGE- 454 (529)
T ss_pred hhhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC----C-CCC----HHHHHHHHHHcCcHHHHHhCcccccchhcc-
Confidence 654 456778999999999886 59999997642 1 122 2346677777777653 3556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+..||||||||++|||||+++|++++||||||+||+.+++.+.+.++++. +++|+|+++|+++ ..+.+|+
T Consensus 455 ~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ 525 (529)
T TIGR02857 455 GGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLA--LAERADR 525 (529)
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHH--HHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 5899999999984 3466775
No 380
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.97 E-value=1e-30 Score=283.50 Aligned_cols=209 Identities=22% Similarity=0.296 Sum_probs=165.7
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-C--CeEEEEEEEcCc
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGNITISGY 754 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~-~--~~~~G~i~i~g~ 754 (1247)
++++||+.++.... +...+++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 56788887765321 23569999999999999999999999999999999999765 2 246789999998
Q ss_pred cCCc---c----cccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCC
Q 000867 755 PKKQ---E----TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLP 825 (1247)
Q Consensus 755 ~~~~---~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 825 (1247)
++-. + -+-+.+++++|++. +.|.+|+.+.+.=......... ..++..+++.++|+.+|+.+-.... +.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~--~~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRL--KS 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHH--hh
Confidence 7532 1 12347899999964 6788999888765443322111 3455567788999999998643222 22
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.+|||||||||.||.||+.+|++||.||||++||...+.+|+++|+++.+ .|.|+|++|||.. -+.++-|+
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDr 223 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADR 223 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcce
Confidence 3567999999999999999999999999999999999999999999999986 5999999999986 35666777
No 381
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=99.97 E-value=3.4e-31 Score=277.27 Aligned_cols=160 Identities=29% Similarity=0.439 Sum_probs=136.6
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++. .++.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 68 (173)
T cd03246 2 EVENVSFRYPG-----------AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRP--TSGRVRLDGADISQ 68 (173)
T ss_pred EEEEEEEEcCC-----------CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEEccc
Confidence 56777776531 123599999999999999999999999999999999998653 47999999987643
Q ss_pred ---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 000867 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQR 835 (1247)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr 835 (1247)
..+++.++|++|++.+++ .|++||+ ||||||
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~~l---------------------------------------------LS~G~~ 102 (173)
T cd03246 69 WDPNELGDHVGYLPQDDELFS-GSIAENI---------------------------------------------LSGGQR 102 (173)
T ss_pred CCHHHHHhheEEECCCCcccc-CcHHHHC---------------------------------------------cCHHHH
Confidence 234567899999988777 4998876 899999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 836 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 836 ~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+ +..|+
T Consensus 103 qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~-~~~d~ 164 (173)
T cd03246 103 QRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPE-TL-ASADR 164 (173)
T ss_pred HHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhCCE
Confidence 9999999999999999999999999999999999999998777999999999985 33 45555
No 382
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.7e-32 Score=268.05 Aligned_cols=193 Identities=24% Similarity=0.335 Sum_probs=164.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+|+++|||||||||||.+++++++.+ +|+|+++|.++..... .+.++.+.|++..-..+||+|-+.||.- +
T Consensus 29 iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRf---P 102 (252)
T COG4604 29 ITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHINSRLTVRDLVGFGRF---P 102 (252)
T ss_pred eeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCC---c
Confidence 58999999999999999999999987 9999999999865433 3678999999999999999999999731 1
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
.++-+ ...+.+.++++.++.+.|++.. ++...+||||||||.-||+
T Consensus 103 YSqGR-----------------------------lt~eD~~~I~~aieyl~L~~l~-----dryLd~LSGGQrQRAfIAM 148 (252)
T COG4604 103 YSQGR-----------------------------LTKEDRRIINEAIEYLHLEDLS-----DRYLDELSGGQRQRAFIAM 148 (252)
T ss_pred ccCCC-----------------------------CchHHHHHHHHHHHHhcccchH-----HHhHHhcccchhhhhhhhe
Confidence 11100 0122345678889999997655 4677789999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
.++++.+.++||||.+.||...+.++++.|++++++.++++|+ +.|+.+.+..++|+|+-|++|+++.+|+++++.
T Consensus 149 VlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii 224 (252)
T COG4604 149 VLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDHIVALKNGKVVKQGSPDEII 224 (252)
T ss_pred eeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhheeeecCCEEEecCCHHHhc
Confidence 9999999999999999999999999999999999987665554 788999999999999999999999999999876
No 383
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=290.40 Aligned_cols=201 Identities=23% Similarity=0.305 Sum_probs=159.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--Ce--EEEEEEEc
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGNITIS 752 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~--~~--~~G~i~i~ 752 (1247)
.+.+++++++++ ++.+|+|+||++++||+++|+||||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 478889887763 34699999999999999999999999999999999997542 21 23666666
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccccccCC
Q 000867 753 GYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVGLP 825 (1247)
Q Consensus 753 g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~~ 825 (1247)
|.+... ...++.++|++|++.+++.+|++||+.+...... ....++.++.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665432 2345678999999999999999999988643221 1123344456788999999964 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||+|||||++|||||+.+|++++|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~ 221 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADY 221 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999998854 699999999985 44455666
No 384
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=293.05 Aligned_cols=200 Identities=23% Similarity=0.253 Sum_probs=157.4
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 589999998763 1359999999999999999999999999999999999753 1 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccccccC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELN----PLRQSLVGL 824 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 824 (1247)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 234567999999988887 499999987653321 112222334566777777543 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+..|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~ 235 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDK 235 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999865 799999999986 34455666
No 385
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.9e-31 Score=291.99 Aligned_cols=191 Identities=21% Similarity=0.344 Sum_probs=155.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|+.+|. +|+|.++|+++.... .++.++|++|++.+++.+|+.||+.++.... .
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~-~-- 100 (232)
T PRK10771 27 RVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG-L-- 100 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccc-c--
Confidence 37899999999999999999999887 899999998765432 2357999999998898899999998742110 0
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
... ......++++++.+||++..++. +..||||||||++||||+
T Consensus 101 ~~~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral 144 (232)
T PRK10771 101 KLN-------------------------------AAQREKLHAIARQMGIEDLLARL-----PGQLSGGQRQRVALARCL 144 (232)
T ss_pred CCC-------------------------------HHHHHHHHHHHHHcCcHHHHhCC-----cccCCHHHHHHHHHHHHH
Confidence 000 00112356778899997655544 457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+..++.+.+|++++|++|++++.|+.+++.
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQE-RQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999987653 2556667899999999999999999999999999887664
No 386
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.6e-31 Score=294.41 Aligned_cols=186 Identities=25% Similarity=0.355 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++... .+.++|++|++.+++.+||+||+.++....+..
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (255)
T PRK11248 29 LLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVE-- 101 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCC--
Confidence 47999999999999999999999887 99999999876532 245899999988888899999998864321100
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
. .+....++++++.+||.+..+ +.+..|||||||||+|||||+
T Consensus 102 --------~------------------------~~~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGq~qrl~laral~ 144 (255)
T PRK11248 102 --------K------------------------MQRLEIAHQMLKKVGLEGAEK-----RYIWQLSGGQRQRVGIARALA 144 (255)
T ss_pred --------H------------------------HHHHHHHHHHHHHcCChhHhh-----CChhhCCHHHHHHHHHHHHHh
Confidence 0 011123567889999975544 345579999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEec--CCcEEEecCcc
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS--DAQIVYQGPRE 231 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~--~G~v~~~G~~~ 231 (1247)
.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++...||+|++|+ +|+++..++.+
T Consensus 145 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 145 ANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 999999999999999999999999999987543 35567778999999999999999998 59999888653
No 387
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.2e-31 Score=303.50 Aligned_cols=196 Identities=20% Similarity=0.271 Sum_probs=155.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|+.++. ...+|+|.++|+++... ..++.++||+|+++++ +.|++|||.|+..
T Consensus 110 ~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~~ 188 (329)
T PRK14257 110 VTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF-EMSIFDNVAYGPR 188 (329)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC-CCcHHHHHHhHHH
Confidence 47999999999999999999998631 02389999999987531 2356799999998877 5799999998643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+.. .. +..++.++..++..+|.+..++.++ +.+.+|||||||||
T Consensus 189 ~~~~~----------~~-----------------------~~~~~~~~~~l~~~~L~~~l~~~~~-~~~~~LSgGqkqRl 234 (329)
T PRK14257 189 NNGIN----------DR-----------------------KILEKIVEKSLKSAALWDEVKDDLD-KAGNALSGGQQQRL 234 (329)
T ss_pred hcCCC----------hH-----------------------HHHHHHHHHHHHHcCCcchhhhhhh-CCcccCCHHHHHHH
Confidence 21100 00 0011123456677777544445555 45678999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+||||++.+|+|++|||||+|||+.+...+.+.++++.+ +.++++++|....+.+.+|+|++|++|++++.|+++++
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l 311 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTI 311 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999988643 36777799999999999999999999999999999887
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 312 ~ 312 (329)
T PRK14257 312 F 312 (329)
T ss_pred h
Confidence 5
No 388
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.3e-30 Score=293.06 Aligned_cols=199 Identities=19% Similarity=0.228 Sum_probs=157.7
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~ 752 (1247)
..++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 4688999998763 235999999999999999999999999999999999975311 247999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----ccccccc
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQSLVG 823 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g 823 (1247)
|.++.. ..+++.++|++|+..+++. |+.||+.+....+. .. ...++.+++.++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987632 2345678999999888874 99999987643321 11 122344567788888742 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 824 LPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 824 ~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+..|+
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~ 229 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADW 229 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999864 689999999985 34556666
No 389
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.97 E-value=2.9e-31 Score=294.41 Aligned_cols=180 Identities=21% Similarity=0.267 Sum_probs=149.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++..
T Consensus 40 ~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~enl~~~~~------- 107 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVIDNVGLGLK------- 107 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHHHHHhccc-------
Confidence 47999999999999999999999887 9999999976532 34679999999888888999999987421
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
. . .+..++++++.+||.+..+ +.+..|||||||||+|||+|+
T Consensus 108 -~---~-----------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~LSgGqkqrl~laraL~ 149 (257)
T PRK11247 108 -G---Q-----------------------------WRDAALQALAAVGLADRAN-----EWPAALSGGQKQRVALARALI 149 (257)
T ss_pred -c---h-----------------------------HHHHHHHHHHHcCChhHhc-----CChhhCCHHHHHHHHHHHHHh
Confidence 0 0 0012456788889875444 345679999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
.+|++++|||||+|||+.++..+.+.|+++.+. .+.+|++++|+.+.+...+|+|++|++|++++.|+.+
T Consensus 150 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 150 HRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999999999987553 3456677899999999999999999999999988653
No 390
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=1.6e-31 Score=282.82 Aligned_cols=185 Identities=24% Similarity=0.278 Sum_probs=163.6
Q ss_pred ceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCC
Q 000867 704 MLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHSP 776 (1247)
Q Consensus 704 ~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~ 776 (1247)
.-++|+|++|+.||+..|||-||||||||+++|.+..+ +..|+|.++|.++.. ..+++.++.|+|...++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 46899999999999999999999999999999999876 458999999998643 123457899999999999
Q ss_pred CcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000867 777 FVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEP 856 (1247)
Q Consensus 777 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEp 856 (1247)
..||.||..|+..++ ..+++++++++.++++.+||....+.+. .+||||+||||.+||||+++|+||++|||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999997766 4567888899999999999999999886 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 857 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 857 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|.|||--+.++++.|.++.++ ++|||++|||.. |-+..=|+
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~r 234 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDR 234 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccce
Confidence 9999999999999999988644 899999999975 34445555
No 391
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=292.52 Aligned_cols=202 Identities=21% Similarity=0.280 Sum_probs=157.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--C-eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~--~-~~~G~i~i~g 753 (1247)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 488999988763 23599999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKK-----QETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~-----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++. ....++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+... .....
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKL-KQSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHh-cCCcc
Confidence 8753 1234567899999988887 499999987653221 11 122345667788888753211111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~ 219 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDM 219 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999865 589999999985 45566666
No 392
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.97 E-value=4.9e-31 Score=289.00 Aligned_cols=187 Identities=33% Similarity=0.522 Sum_probs=147.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC---CCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD---SKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~---~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+||+||+.++......
T Consensus 35 ~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~ 111 (226)
T cd03234 35 VMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLP 111 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcc
Confidence 479999999999999999999998 65 999999998775434457899999999999999999999986543210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHH-HHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDY-YLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
... .+ ......++. .++.+++.+.. ++.++.|||||||||+||
T Consensus 112 ~~~----~~---------------------------~~~~~~~~~~~l~~~~l~~~~-----~~~~~~LS~G~~qrl~la 155 (226)
T cd03234 112 RKS----SD---------------------------AIRKKRVEDVLLRDLALTRIG-----GNLVKGISGGERRRVSIA 155 (226)
T ss_pred ccc----ch---------------------------HHHHHHHHHHHHHhhcchhhh-----cccccCcCHHHHHHHHHH
Confidence 000 00 000011223 67777775443 445568999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCC-hhHHhhcccEEEecCCcEEEec
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPA-PETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~-~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
|+|+.+|++++|||||+|||+.++.++.+.++++.+ . +.++++++|+. .++.+.+|++++|++|++++.|
T Consensus 156 ral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~-~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 156 VQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-R-NRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999998754 3 44556677776 6899999999999999998875
No 393
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2.1e-31 Score=293.89 Aligned_cols=194 Identities=27% Similarity=0.346 Sum_probs=149.4
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++. .++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhh
Confidence 56777776531 113599999999999999999999999999999999998653 47999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHH-----HHHHHHHHHc--CCCccccccccCCCCC
Q 000867 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQK-----MFIEEIMELV--ELNPLRQSLVGLPGES 828 (1247)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 828 (1247)
...++.++|++|++.+++ .|++||+.+.... ....... ..+++.++.+ ++.+..+.. ..
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 233566899999988876 6999999765321 1111111 1233445544 454444433 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++. +++|||+++|++.. + ...|+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~ 205 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLST-I-ENADR 205 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCE
Confidence 799999999999999999999999999999999999999999999986 48999999999963 3 33665
No 394
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.97 E-value=3.1e-31 Score=289.94 Aligned_cols=181 Identities=23% Similarity=0.324 Sum_probs=144.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc------c-ceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP------Q-RTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~------~-~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|+|.++|. +|+|.++|+++..... + +.++|++|++.+++.+||+||+.+...
T Consensus 33 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 109 (221)
T TIGR02211 33 IVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLL 109 (221)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999887 9999999988754221 2 569999999888888999999988643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
.... + . .+....+.++++.+||.+..+ +.+..|||||||||
T Consensus 110 ~~~~----~------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrv 150 (221)
T TIGR02211 110 IGKK----S------V------------------------KEAKERAYEMLEKVGLEHRIN-----HRPSELSGGERQRV 150 (221)
T ss_pred hcCC----C------H------------------------HHHHHHHHHHHHHcCChhhhh-----CChhhCCHHHHHHH
Confidence 2110 0 0 001123456788899975444 34557999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEE
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~ 225 (1247)
+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+.+.+. .+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999876533 456666888887775 47999999999875
No 395
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=99.97 E-value=2.3e-31 Score=291.90 Aligned_cols=200 Identities=26% Similarity=0.365 Sum_probs=156.6
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|+++.++.. +++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 10 ~~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~ 77 (226)
T cd03248 10 GIVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQP--QGGQVLLDGKP 77 (226)
T ss_pred ceEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCcEEEECCCc
Confidence 458899999887411 123599999999999999999999999999999999998653 47999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCH---HHHHHHHHHHHHHc--CCCccccccccCCCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDS---ETQKMFIEEIMELV--ELNPLRQSLVGLPGE 827 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~---~~~~~~v~~~l~~l--~l~~~~~~~~g~~~~ 827 (1247)
+.. ...++.++|++|++.+++ .|++||+.+..... .... ...+..++++++.+ |+.+..+..+
T Consensus 78 ~~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~----- 148 (226)
T cd03248 78 ISQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSC---SFECVKEAAQKAHAHSFISELASGYDTEVGEKG----- 148 (226)
T ss_pred hHHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCC---CHHHHHHHHHHcCcHHHHHhccccccchhhcCC-----
Confidence 532 233467899999988776 59999997643211 1100 11112346777887 6766555543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|+++|+++. + +..|+
T Consensus 149 ~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~ 217 (226)
T cd03248 149 SQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLST-V-ERADQ 217 (226)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHH-H-HhCCE
Confidence 57999999999999999999999999999999999999999999999765 6899999999864 3 33565
No 396
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.97 E-value=5.1e-31 Score=295.50 Aligned_cols=211 Identities=28% Similarity=0.399 Sum_probs=172.0
Q ss_pred CCCCCccCCCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCe
Q 000867 665 KKRGMVLPFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY 744 (1247)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~ 744 (1247)
....+.+|.....++.+++.+.. + ..++++|+|+||.++|||-+||+||||||||||.++|.|.-. +
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~P---P--------g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p 388 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAAP---P--------GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--P 388 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeecC---C--------CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--c
Confidence 34456778788899999998742 2 245789999999999999999999999999999999999765 3
Q ss_pred EEEEEEEcCccCCcc---cccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHH-----HHHHHHHHHHcCCCc
Q 000867 745 ITGNITISGYPKKQE---TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQ-----KMFIEEIMELVELNP 816 (1247)
Q Consensus 745 ~~G~i~i~g~~~~~~---~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~-----~~~v~~~l~~l~l~~ 816 (1247)
.+|.|.+||.+.++. .+-+.+||.||+-.+|+ -||.||+. |...+.+.+.. ...|.+++ +.+.+
T Consensus 389 ~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~ 460 (580)
T COG4618 389 TSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQ 460 (580)
T ss_pred CCCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcC
Confidence 589999999988653 45678999999999987 59999994 33334343321 11222322 45566
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHh
Q 000867 817 LRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFES 896 (1247)
Q Consensus 817 ~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 896 (1247)
-.||.+|.. +.+||||||||+++||||-.+|.+++||||-|+||.+....+.+.|.+..++|+|+|+++|+|+ +...
T Consensus 461 GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~ 537 (580)
T COG4618 461 GYDTRIGEG-GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALAS 537 (580)
T ss_pred CccCccCCC-CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhh
Confidence 678999854 4689999999999999999999999999999999999999999999999889999999999996 5556
Q ss_pred hhc
Q 000867 897 FDE 899 (1247)
Q Consensus 897 fd~ 899 (1247)
.|+
T Consensus 538 ~Dk 540 (580)
T COG4618 538 VDK 540 (580)
T ss_pred cce
Confidence 666
No 397
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.97 E-value=3.8e-31 Score=294.02 Aligned_cols=192 Identities=23% Similarity=0.368 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+|. ...+|+|.++|+++... ..++.++|++|++.+++ .|++||+.+...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~ 107 (247)
T TIGR00972 29 VTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPR 107 (247)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHH
Confidence 47999999999999999999999763 11289999999887531 12467999999988887 999999998653
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc----ccccccccCCccccccccc
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE----VCDDTLVGDEMVRGISGGQ 149 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1247)
..+. .. ..+....++.+++.+||. +.. ++.+..|||||
T Consensus 108 ~~~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~~~~LSgG~ 149 (247)
T TIGR00972 108 LHGI---KD------------------------------KKELDEIVEESLKKAALWDEVKDRL-----HDSALGLSGGQ 149 (247)
T ss_pred hcCC---CC------------------------------HHHHHHHHHHHHHHcCCCcchhhHh-----hCCcccCCHHH
Confidence 2210 00 001112356678888986 333 34556899999
Q ss_pred cchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 150 rqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
||||+|||||+.+|++++|||||+|||+.++..+.+.++++.+ + .+|++++|+.+++.+.+|++++|++|++++.|+
T Consensus 150 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 150 QQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998754 3 567778999999999999999999999999998
Q ss_pred cchHH
Q 000867 230 RELVL 234 (1247)
Q Consensus 230 ~~~~~ 234 (1247)
++++.
T Consensus 227 ~~~~~ 231 (247)
T TIGR00972 227 TEQIF 231 (247)
T ss_pred HHHHH
Confidence 87653
No 398
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=3.4e-31 Score=291.39 Aligned_cols=187 Identities=24% Similarity=0.308 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (230)
T TIGR03410 28 VTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP 104 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC
Confidence 47999999999999999999999987 999999998765322 13579999999989998999999988643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhC-CcccccccccCCccccccccccchhHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLG-LEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
. . .....+++++.++ +.+.. ++.+..||||||||++|
T Consensus 105 ~----~---------------------------------~~~~~~~~l~~~~~l~~~~-----~~~~~~LS~G~~qrv~l 142 (230)
T TIGR03410 105 R----R---------------------------------SRKIPDEIYELFPVLKEML-----GRRGGDLSGGQQQQLAI 142 (230)
T ss_pred c----c---------------------------------hHHHHHHHHHHHHhHHHHh-----hCChhhCCHHHHHHHHH
Confidence 0 0 0001233455554 33323 34556799999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
||||+.+|++++|||||+|||+.++.++.+.|+++.+. .++++++++|+.+++..++|++++|++|++++.|+.+++
T Consensus 143 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 143 ARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999999999987543 356677789999999999999999999999999987765
No 399
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.97 E-value=4.3e-31 Score=290.51 Aligned_cols=187 Identities=23% Similarity=0.299 Sum_probs=147.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1247)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+++.+||+||+.+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~ 109 (228)
T cd03257 33 TLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPL 109 (228)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHH
Confidence 47999999999999999999999887 999999998875422 246799999997 4667899999998864
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCccccccccccc
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1247)
....... .. ...+...+++++.++|. ...+ +.+..|||||||
T Consensus 110 ~~~~~~~---------~~-----------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~q 152 (228)
T cd03257 110 RIHGKLS---------KK-----------------------EARKEAVLLLLVGVGLPEEVLN-----RYPHELSGGQRQ 152 (228)
T ss_pred HhccCCc---------HH-----------------------HHHHHHHHHHHHHCCCChhHhh-----CCchhcCHHHHH
Confidence 3221000 00 00011124567888884 2333 445679999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
||+|||||+.+|++++|||||+|||+.++..+.+.++++++. .+.+|++++|+.+++...+|++++|++|+++..|
T Consensus 153 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 153 RVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999987653 2456777899999999999999999999998765
No 400
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=99.97 E-value=1.5e-30 Score=290.56 Aligned_cols=200 Identities=26% Similarity=0.268 Sum_probs=156.6
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc-
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 755 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~- 755 (1247)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 378889887763 13589999999999999999999999999999999998653 47999999976
Q ss_pred ----CCcc-------cccceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-ccccc
Q 000867 756 ----KKQE-------TFTRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSL 821 (1247)
Q Consensus 756 ----~~~~-------~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 821 (1247)
+... ..++.++|++|++. +.+.+|+.|++.+..... . .......++.++++++.+|+.+ ..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 12345899999975 345678999986542211 1 0111223456788999999963 55554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 822 ~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+ +.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+..|+
T Consensus 146 ~-----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~ 218 (253)
T TIGR02323 146 P-----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQR 218 (253)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 4 469999999999999999999999999999999999999999999997654 899999999985 34445565
No 401
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3.9e-31 Score=303.12 Aligned_cols=198 Identities=19% Similarity=0.185 Sum_probs=158.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCC-ceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKL-KFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLAF 70 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~-~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~--~~~~~lTv~e~l~f 70 (1247)
+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++|++|++ .+.+.+||.+++..
T Consensus 35 ~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~ 114 (326)
T PRK11022 35 VVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIME 114 (326)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHH
Confidence 479999999999999999999987421 248999999998754321 13699999987 47888999999876
Q ss_pred HHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000867 71 SARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1247)
....... . ...+.++.++++|+.+||.+..+ +-++.+..||||||
T Consensus 115 ~l~~~~~---------~------------------------~~~~~~~~~~~~L~~~gL~~~~~--~l~~~p~~LSgGq~ 159 (326)
T PRK11022 115 AIKVHQG---------G------------------------NKKTRRQRAIDLLNQVGIPDPAS--RLDVYPHQLSGGMS 159 (326)
T ss_pred HHHHhcC---------C------------------------CHHHHHHHHHHHHHHCCCCChHH--HHhCCchhCCHHHH
Confidence 5432100 0 00112234677899999974321 12456778999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
|||+|||||+.+|+++++||||+|||+.++.++++.|+++.+. .+.++++++|+.+.+..++|+|++|++|++++.|+.
T Consensus 160 QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~ 238 (326)
T PRK11022 160 QRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKA 238 (326)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999998654 356777799999999999999999999999999998
Q ss_pred chHH
Q 000867 231 ELVL 234 (1247)
Q Consensus 231 ~~~~ 234 (1247)
+++.
T Consensus 239 ~~~~ 242 (326)
T PRK11022 239 HDIF 242 (326)
T ss_pred HHHh
Confidence 8875
No 402
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.3e-31 Score=286.36 Aligned_cols=199 Identities=23% Similarity=0.296 Sum_probs=165.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC-C-CCceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD-S-KLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHD--VHIGEMTVRETLA 69 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~-~-~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~--~~~~~lTv~e~l~ 69 (1247)
+.+|+|.|||||||+.++|.|+++ + ....+|+|.++|+++..... .+.|+|++|++ .+-|.+||.+.+.
T Consensus 33 ~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~ 112 (316)
T COG0444 33 ILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIA 112 (316)
T ss_pred EEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHH
Confidence 368999999999999999999997 4 33468999999998643321 25799999984 6788899999987
Q ss_pred HHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000867 70 FSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQ 149 (1247)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1247)
-..+.+.... ..+++.+.+.++|+.+||++.+ .+.+..+.+|||||
T Consensus 113 E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~--~~~~~YPhelSGGM 158 (316)
T COG0444 113 EVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE--RRLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH--HHHhhCCcccCCcH
Confidence 7654321000 0122344567789999998643 24467889999999
Q ss_pred cchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 150 rqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
||||.||.||+.+|++++.||||+|||..++.+|++.|+++.+ ..+++++.|||+..-+.++||||+||..|++++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 9999999999999999999999999999999999999999877 457888889999999999999999999999999999
Q ss_pred cchHH
Q 000867 230 RELVL 234 (1247)
Q Consensus 230 ~~~~~ 234 (1247)
.+++.
T Consensus 238 ~~~i~ 242 (316)
T COG0444 238 VEEIF 242 (316)
T ss_pred HHHHh
Confidence 98875
No 403
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=3.8e-31 Score=252.17 Aligned_cols=188 Identities=25% Similarity=0.323 Sum_probs=154.0
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---------cccceEEEeccccccCCCCCHHHHHHHHH
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---------VPQRTAAYISQHDVHIGEMTVRETLAFSA 72 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---------~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1247)
+.++||||+|||||++.|.=+..|. +|+..+.|...+-. ..|+.+|+|+|+..++|.+||.||+.-+.
T Consensus 31 lvllgpsgagkssllr~lnlle~p~---sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap 107 (242)
T COG4161 31 LVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAP 107 (242)
T ss_pred EEEECCCCCchHHHHHHHHHHhCCC---CCeEEecccccccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhh
Confidence 5789999999999999998777776 99999987643211 12467999999999999999999997542
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccch
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKR 152 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1247)
++ + ..+.+.+++....++|+++.|.+.+| +.+-.|||||+||
T Consensus 108 -~k--------v------------------------~gl~~~qa~~~a~ellkrlrl~~~ad-----r~plhlsggqqqr 149 (242)
T COG4161 108 -CR--------V------------------------LGLSKDQALARAEKLLKRLRLKPYAD-----RYPLHLSGGQQQR 149 (242)
T ss_pred -HH--------H------------------------hCCCHHHHHHHHHHHHHHhccccccc-----cCceecccchhhh
Confidence 11 0 01122334445678899999987665 5666899999999
Q ss_pred hHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 153 vsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
|+|||||+.+|++|++||||++|||+-..++++.+++++.. +.+-++++|..+.+-..+.+|+.|++|+|++.|+.+.
T Consensus 150 vaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~t--gitqvivthev~va~k~as~vvyme~g~ive~g~a~~ 227 (242)
T COG4161 150 VAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAET--GITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhc--CceEEEEEeehhHHHhhhhheEeeecCeeEeecchhh
Confidence 99999999999999999999999999999999999998653 5555668999999999999999999999999998754
No 404
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=2.2e-31 Score=331.60 Aligned_cols=193 Identities=24% Similarity=0.375 Sum_probs=153.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.+||+||||||||||+++|+|.++|. +|+|.+||.++++.. .++.++||+|++.+|. .||+|||.++..-
T Consensus 357 ~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~--- 429 (567)
T COG1132 357 KVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRPD--- 429 (567)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCCC---
Confidence 37999999999999999999999987 999999999887654 3688999999988777 6999999996321
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
+++ ++..+++... ...+.++ .++++.||.||+ ++.+||||||||++|||
T Consensus 430 ---------at~-------------eei~~a~k~a------~~~d~I~--~lp~g~dt~vge-~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 430 ---------ATD-------------EEIEEALKLA------NAHEFIA--NLPDGYDTIVGE-RGVNLSGGQRQRLAIAR 478 (567)
T ss_pred ---------CCH-------------HHHHHHHHHh------ChHHHHH--hCcccccceecC-CCccCCHHHHHHHHHHH
Confidence 000 0111111100 0122222 368899999995 45579999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|++.+|+|++||||||+||+.++..|.+.+++.. .++|+++ +.|..+.+.+ +|+|++|++|++++.|+++++..
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEECCEEEEecCHHHHHH
Confidence 9999999999999999999999999999998754 2345555 7887766655 99999999999999999999875
No 405
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2.6e-31 Score=292.18 Aligned_cols=196 Identities=25% Similarity=0.387 Sum_probs=150.2
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.+. +.+.+++|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 477889887753 123599999999999999999999999999999999998653 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccc-c-----CCCC
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLV-G-----LPGE 827 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~-g-----~~~~ 827 (1247)
.. ..+++.++|++|++.+++. |++||+.+... .... ..+++.++.+++.+..+... | ....
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 42 2345668999999888775 99999976421 1111 12334444444433322211 0 1123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.||||||||++||++|+.+|++++|||||+|||+.++..+++.|+++. +|+|||+++|++.. + +..|+
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~ 206 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADK 206 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCE
Confidence 5799999999999999999999999999999999999999999999985 58999999999863 3 34555
No 406
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.97 E-value=5.1e-31 Score=286.06 Aligned_cols=186 Identities=20% Similarity=0.291 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-cccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++... ..++.++|++|++.+++.+|++||+.+...... .
T Consensus 26 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~-~- 100 (213)
T TIGR01277 26 IVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL-K- 100 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhccC-C-
Confidence 47999999999999999999999987 99999999886532 234679999999988988999999987532100 0
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
. . .+.+..++++++.+||++..++ .++.||||||||++||||+
T Consensus 101 --~--~----------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrl~laral 143 (213)
T TIGR01277 101 --L--N----------------------------AEQQEKVVDAAQQVGIADYLDR-----LPEQLSGGQRQRVALARCL 143 (213)
T ss_pred --c--c----------------------------HHHHHHHHHHHHHcCcHHHhhC-----CcccCCHHHHHHHHHHHHH
Confidence 0 0 0011234667888999755443 4557999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
+.+|++++|||||+|||..++..+.+.++++.+. .+++|++++|+..++.+.+|++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999987643 35667778999999999999999999999998874
No 407
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=99.97 E-value=1e-30 Score=289.45 Aligned_cols=184 Identities=26% Similarity=0.354 Sum_probs=152.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
-++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~~--- 65 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAP--DEGVIKRNG--- 65 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECC---
Confidence 478889887763 23599999999999999999999999999999999998653 479999987
Q ss_pred CcccccceEEEeccCCCCCCC--cCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 757 KQETFTRISGYCEQNDIHSPF--VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 757 ~~~~~~~~~~~v~q~~~~~~~--ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
+..++|++|++.+++. .|+.+++.+. .... ++++.++++.+|+.+..+..+ +.|||||
T Consensus 66 -----~~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 66 -----KLRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred -----ccCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 2358999999877765 4778776431 1111 234678999999988777664 4699999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||++||+||+.+|++++|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~ 190 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDE 190 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998765 899999999986 44555666
No 408
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=99.97 E-value=2.5e-31 Score=339.70 Aligned_cols=195 Identities=27% Similarity=0.383 Sum_probs=161.1
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++|+++. .++++|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 57999999998852 124699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+.+ ..+++.+|||+|++.+++ .|++||+.++. + +.+. +.+.++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 653 456788999999999886 59999997541 1 2222 335667777776543 35666643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.+||||||||++|||||+++|+||+||||||+||+.++..+.+.|++ .++|+|+++|+++ ....+|+
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~ 680 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDE 680 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCE
Confidence 468999999999999999999999999999999999999999999986 4899999999985 4456777
No 409
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.5e-31 Score=301.70 Aligned_cols=192 Identities=18% Similarity=0.192 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1247)
+++|+|+||||||||+++|+|+++|. +|+|.++|+++.... .++.++||+|++ .+.+.+||.+++....
T Consensus 43 ~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~ 119 (327)
T PRK11308 43 TLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPL 119 (327)
T ss_pred EEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHH
Confidence 47999999999999999999999886 899999998875432 245799999987 5788899999998754
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcc-cccccccCCccccccccccc
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1247)
..... . ...+.+..+.++++.+||.. .. ++.+..|||||||
T Consensus 120 ~~~~~---------~------------------------~~~~~~~~~~~~l~~~gL~~~~~-----~~~p~~LSgGq~Q 161 (327)
T PRK11308 120 LINTS---------L------------------------SAAERREKALAMMAKVGLRPEHY-----DRYPHMFSGGQRQ 161 (327)
T ss_pred HHccC---------C------------------------CHHHHHHHHHHHHHHCCCChHHh-----cCCCccCCHHHHH
Confidence 32110 0 00112234677899999953 23 4556789999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
||+|||||+.+|++|++||||+|||..++.+|++.|+++.+. .++++++++|+...+..++|+|++|++|++++.|+.+
T Consensus 162 Rv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~ 240 (327)
T PRK11308 162 RIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKE 240 (327)
T ss_pred HHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999987654 3567777999999999999999999999999999988
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 241 ~~~ 243 (327)
T PRK11308 241 QIF 243 (327)
T ss_pred HHh
Confidence 875
No 410
>PRK10908 cell division protein FtsE; Provisional
Probab=99.97 E-value=4.6e-31 Score=288.51 Aligned_cols=181 Identities=22% Similarity=0.298 Sum_probs=147.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (222)
T PRK10908 30 MAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLII 106 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHh
Confidence 47999999999999999999999887 999999998765321 246799999998888899999999886432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. .++....++++++.+||.+..+. .+..||||||||++
T Consensus 107 ~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 147 (222)
T PRK10908 107 AGAS----------------------------------GDDIRRRVSAALDKVGLLDKAKN-----FPIQLSGGEQQRVG 147 (222)
T ss_pred cCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----CchhCCHHHHHHHH
Confidence 2100 00111234567888898754443 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEE
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~ 225 (1247)
||||++.+|++++|||||+|||+.++..+.+.++++.+ . ++++++++|+.+++...+|++++|++|+++
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 148 IARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999999999999998754 2 556777899999999999999999999974
No 411
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=4.7e-31 Score=283.14 Aligned_cols=166 Identities=44% Similarity=0.732 Sum_probs=138.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|.++|....+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--- 111 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--- 111 (202)
T ss_pred EEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc---
Confidence 4799999999999999999999982112399999999887543 23467999999999999999999998743110
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
.++.+..||||||||++||||
T Consensus 112 -----------------------------------------------------------~~~~~~~LS~Ge~qrl~lara 132 (202)
T cd03233 112 -----------------------------------------------------------GNEFVRGISGGERKRVSIAEA 132 (202)
T ss_pred -----------------------------------------------------------cccchhhCCHHHHHHHHHHHH
Confidence 123445799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
|+.+|++++|||||+|||+.++..+.+.++++.+..+.++++++||+.+++.+.+|++++|++|++++.|
T Consensus 133 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 133 LVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998865434566776777778999999999999999998765
No 412
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.7e-31 Score=320.14 Aligned_cols=189 Identities=25% Similarity=0.311 Sum_probs=156.5
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCCCCCCCc
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFTRISGYCEQNDIHSPFV 778 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~~l 778 (1247)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998653 479999999876421 2345689999999888999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000867 779 TVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTS 858 (1247)
Q Consensus 779 tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEpts 858 (1247)
||+||+.+..........+.+...++++++++.+++.+..+..+ ..|||||||||+||+||+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123334456889999999987777665 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 859 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 859 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~ 203 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDE 203 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999998877999999999985 34455666
No 413
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=99.97 E-value=2.5e-31 Score=339.32 Aligned_cols=197 Identities=24% Similarity=0.362 Sum_probs=161.7
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
...++++|++++++ +++++|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.
T Consensus 471 ~~~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~ 536 (708)
T TIGR01193 471 NGDIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGF 536 (708)
T ss_pred CCcEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCE
Confidence 34799999999874 123599999999999999999999999999999999998763 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 824 (1247)
++.+ ..+++.+|||+|++.+++ -|++||+.++.. .+.+. +.+.++++..++.+. .|+.+|.
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e 607 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSE 607 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecC
Confidence 8643 456778999999999886 499999986521 12222 235666666666432 3666664
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++.+||||||||++||||++++|+||+||||||+||++++..+++.|+++ +|+|+|+++|+++ ..+.+|+
T Consensus 608 -~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~ 677 (708)
T TIGR01193 608 -EGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDK 677 (708)
T ss_pred -CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCE
Confidence 34689999999999999999999999999999999999999999999875 4799999999995 4566777
No 414
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.6e-31 Score=296.79 Aligned_cols=191 Identities=25% Similarity=0.339 Sum_probs=155.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+...||.||+.++....+
T Consensus 32 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~ 108 (277)
T PRK13652 32 RIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLG 108 (277)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 999999998765322 2357999999863 3446799999987543211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. + ..+.+..++++++.+||.+..++. ++.||||||||++||
T Consensus 109 ~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrl~la 149 (277)
T PRK13652 109 L----D------------------------------EETVAHRVSSALHMLGLEELRDRV-----PHHLSGGEKKRVAIA 149 (277)
T ss_pred C----C------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----cccCCHHHHHHHHHH
Confidence 0 0 001122356788999997655544 457999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 9999999999999999999999999999999987653 3567777899999999999999999999999999988764
No 415
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.2e-31 Score=291.92 Aligned_cols=188 Identities=24% Similarity=0.366 Sum_probs=150.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 109 (237)
T PRK11614 33 IVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAE 109 (237)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhccC
Confidence 47899999999999999999999887 999999998875432 23579999999888988999999987532100
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHh-CCcccccccccCCccccccccccchhHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVL-GLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
. .+ ....++++++.+ ++.+..+ +.+..||||||||++|
T Consensus 110 ---~----~~-----------------------------~~~~~~~~l~~~~~l~~~~~-----~~~~~LS~G~~qrl~l 148 (237)
T PRK11614 110 ---R----DQ-----------------------------FQERIKWVYELFPRLHERRI-----QRAGTMSGGEQQMLAI 148 (237)
T ss_pred ---h----hH-----------------------------HHHHHHHHHHHHHHHHHHHh-----CchhhCCHHHHHHHHH
Confidence 0 00 001123344555 3543333 3455799999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||||+.+|++++|||||+|||+.++..+.+.++++.+ . +++|+.++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 149 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 149 GRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 9999999999999999999999999999999998754 3 556666899999999999999999999999999887764
No 416
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.97 E-value=5.5e-31 Score=294.34 Aligned_cols=191 Identities=21% Similarity=0.291 Sum_probs=154.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC----------------cccceEEEeccccccCCCCCH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF----------------VPQRTAAYISQHDVHIGEMTV 64 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~i~yv~Q~~~~~~~lTv 64 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 33 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv 109 (257)
T PRK10619 33 VISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTV 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcH
Confidence 47999999999999999999999886 89999999876420 124579999999999988999
Q ss_pred HHHHHHHHh-ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccc
Q 000867 65 RETLAFSAR-CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVR 143 (1247)
Q Consensus 65 ~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 143 (1247)
+||+.++.. .... . ..+.+..+.++++.+||.+.. .++.+.
T Consensus 110 ~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~~l~~~gl~~~~----~~~~~~ 151 (257)
T PRK10619 110 LENVMEAPIQVLGL----------S------------------------KQEARERAVKYLAKVGIDERA----QGKYPV 151 (257)
T ss_pred HHHHHHHHHHhCCC----------C------------------------HHHHHHHHHHHHHHcCCChhh----hhCCcc
Confidence 999987532 1100 0 001122356678899997542 124456
Q ss_pred cccccccchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCc
Q 000867 144 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1247)
Q Consensus 144 ~LSGGqrqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~ 223 (1247)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|++++|+..++..+||+|++|++|+
T Consensus 152 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 152 HLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 8999999999999999999999999999999999999999999998754 35667778999999999999999999999
Q ss_pred EEEecCcchHH
Q 000867 224 IVYQGPRELVL 234 (1247)
Q Consensus 224 v~~~G~~~~~~ 234 (1247)
+++.|+++++.
T Consensus 230 i~~~~~~~~~~ 240 (257)
T PRK10619 230 IEEEGAPEQLF 240 (257)
T ss_pred EEEeCCHHHhh
Confidence 99999887653
No 417
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=1.1e-30 Score=289.82 Aligned_cols=182 Identities=24% Similarity=0.350 Sum_probs=152.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCcCHH
Q 000867 705 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPFVTVY 781 (1247)
Q Consensus 705 iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~ 781 (1247)
+|+|+|+++++||+++|+||||||||||+++|+|..+ . +|+|.++|.++.. ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 2 7999999987643 22345689999998888889999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCcEEEEe
Q 000867 782 ESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVA-------NPSIIFMD 854 (1247)
Q Consensus 782 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~-------~p~il~lD 854 (1247)
||+.+.... ....+..+++++++++.+|+.+..++.+ +.||||||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333456789999999987766654 4699999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 855 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 855 EptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~ 202 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADR 202 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999998777899999999986 34555665
No 418
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.9e-30 Score=289.08 Aligned_cols=204 Identities=22% Similarity=0.279 Sum_probs=158.1
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 753 (1247)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887653 2359999999999999999999999999999999999643 1 12479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 754 YPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 754 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+..++++.++++.+++.+...... +....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKL-DKSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHH-hCCcc
Confidence 87642 1335679999999988875 99999987643221 1123334566788899998854221111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||+|||||++|||+|+.+|++++|||||+|||..+...+.+.|++++ +++|||+++|++. ++.+..|+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~ 214 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKY 214 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCE
Confidence 799999999999999999999999999999999999999999999985 4799999999985 33333443
No 419
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=99.97 E-value=3.8e-31 Score=336.84 Aligned_cols=198 Identities=27% Similarity=0.419 Sum_probs=163.5
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCc
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 754 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 754 (1247)
...++++|++++++. +++++|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.
T Consensus 461 ~~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~ 527 (694)
T TIGR03375 461 QGEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGV 527 (694)
T ss_pred cceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCE
Confidence 357999999999841 234699999999999999999999999999999999998763 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 000867 755 PKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGL 824 (1247)
Q Consensus 755 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~ 824 (1247)
++++ ..+++.++||+|++.+++ .|++||+.+.. + +.+. +++.++++..++.+. .|+.+|.
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e 597 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YADD----EEILRAAELAGVTEFVRRHPDGLDMQIGE 597 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCCH----HHHHHHHHHcChHHHHHhCcccccceecC
Confidence 8754 456788999999999887 59999997641 1 2222 335666777666542 3566664
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 825 PGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 825 ~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
. +.+||||||||++|||||+++|++++||||||+||++++..+++.|+++. +++|+|+++|+++ ..+.+|+
T Consensus 598 ~-G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~ 668 (694)
T TIGR03375 598 R-GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDR 668 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCE
Confidence 3 46799999999999999999999999999999999999999999999875 4799999999995 4567777
No 420
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=6.2e-31 Score=291.64 Aligned_cols=196 Identities=19% Similarity=0.281 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~ 106 (242)
T TIGR03411 30 LRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDK 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhccc
Confidence 47999999999999999999999887 999999998765322 13469999999999999999999988643110
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
..+...... ...+.+..++++++.+|+++..+. .++.|||||||||+||
T Consensus 107 --~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~Ge~qrv~la 155 (242)
T TIGR03411 107 --SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADR-----LAGLLSHGQKQWLEIG 155 (242)
T ss_pred --ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHH
Confidence 000000000 000112245678899999765544 4457999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
||++.+|++++|||||+|||+.++..+.+.++++.+ +.+|++++|+.+++.++||++++|++|++++.|+.+++
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 999999999999999999999999999999998743 35677789999999999999999999999999987665
No 421
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5e-31 Score=296.45 Aligned_cols=189 Identities=26% Similarity=0.354 Sum_probs=153.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccc-cCCCCCHHHHHHHHHhcc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDV-HIGEMTVRETLAFSARCQ 75 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~ 75 (1247)
+++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++. .+...||.||+.++....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~ 106 (274)
T PRK13644 30 YIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL 106 (274)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc
Confidence 47999999999999999999999887 999999998875321 2357999999865 366789999998864321
Q ss_pred CCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHH
Q 000867 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
+.. ..+.++.++++++.+||.+..++. +..||||||||++|
T Consensus 107 ~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~l 147 (274)
T PRK13644 107 CLP----------------------------------PIEIRKRVDRALAEIGLEKYRHRS-----PKTLSGGQGQCVAL 147 (274)
T ss_pred CCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCC-----cccCCHHHHHHHHH
Confidence 100 001122356778899997665544 45799999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||||+.+|++++|||||+|||+.++..+.+.++++.+ .+++|++++|+.+++ ..+|++++|++|++++.|+.+++.
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999998754 356677789998887 569999999999999999987754
No 422
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6e-31 Score=294.16 Aligned_cols=206 Identities=21% Similarity=0.280 Sum_probs=156.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV----PQRTAAYISQHDVHIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~----~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|+.+|+ +|+|.++|.++.... .+..++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 109 (255)
T PRK11300 33 IVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQL 109 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccc
Confidence 47999999999999999999999987 999999998775422 12358999999999999999999998643110
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. +....... . +. . .....+....++++++.+||.+..+ +.+..||||||||++||
T Consensus 110 ~~---~~~~~~~~------~-~~--~-------~~~~~~~~~~~~~~l~~~gl~~~~~-----~~~~~LS~G~~qrv~la 165 (255)
T PRK11300 110 KT---GLFSGLLK------T-PA--F-------RRAESEALDRAATWLERVGLLEHAN-----RQAGNLAYGQQRRLEIA 165 (255)
T ss_pred cc---hhhhhhcc------c-cc--c-------ccchhHHHHHHHHHHHhCChhhhhh-----CChhhCCHHHHHHHHHH
Confidence 00 00000000 0 00 0 0000012234567788899875444 44557999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 166 ~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 166 RCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIR 242 (255)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHHh
Confidence 9999999999999999999999999999999987553 3566777899999999999999999999999999877653
No 423
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.7e-30 Score=294.64 Aligned_cols=207 Identities=25% Similarity=0.302 Sum_probs=160.5
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeEEEEEEEc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 752 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~---~~~~G~i~i~ 752 (1247)
..+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 44 ~~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~ 110 (305)
T PRK14264 44 AKLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELD 110 (305)
T ss_pred ceEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999998763 23599999999999999999999999999999999997531 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCC---------CCC-HHHHHHHHHHHHHHcCCCcc
Q 000867 753 GYPKKQ-----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPP---------EVD-SETQKMFIEEIMELVELNPL 817 (1247)
Q Consensus 753 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~---------~~~-~~~~~~~v~~~l~~l~l~~~ 817 (1247)
|.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+..++.++++++.+++.+.
T Consensus 111 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 189 (305)
T PRK14264 111 GQDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDE 189 (305)
T ss_pred CEEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchh
Confidence 987642 123467899999988887 59999998764321100 011 12234567889999988532
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhh
Q 000867 818 RQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESF 897 (1247)
Q Consensus 818 ~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~f 897 (1247)
.+... ....+.||||||||++||+||+.+|+||+|||||+|||+.+...+.+.|+++++ +.|||+++|+++. +.+..
T Consensus 190 ~~~~~-~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~~-i~~~~ 266 (305)
T PRK14264 190 VNDRL-DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQQ-AARIS 266 (305)
T ss_pred hhHHh-cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHHH-HHHhc
Confidence 21221 112357999999999999999999999999999999999999999999999876 4899999999863 44555
Q ss_pred hc
Q 000867 898 DE 899 (1247)
Q Consensus 898 d~ 899 (1247)
|+
T Consensus 267 d~ 268 (305)
T PRK14264 267 DQ 268 (305)
T ss_pred CE
Confidence 65
No 424
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.6e-30 Score=288.91 Aligned_cols=202 Identities=21% Similarity=0.248 Sum_probs=159.5
Q ss_pred CcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--C-eEEEEEEE
Q 000867 675 PHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITI 751 (1247)
Q Consensus 675 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~--~-~~~G~i~i 751 (1247)
+..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + ..+|+|.+
T Consensus 14 ~~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~ 80 (265)
T PRK14252 14 QQKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIIL 80 (265)
T ss_pred CceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEE
Confidence 45689999998763 23599999999999999999999999999999999997542 1 25899999
Q ss_pred cCccCC---c----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccc
Q 000867 752 SGYPKK---Q----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP----LRQS 820 (1247)
Q Consensus 752 ~g~~~~---~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~ 820 (1247)
+|.+.. . ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+.
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 157 (265)
T PRK14252 81 HPDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG--VKRRSILEERVENALRNAALWDEVKDRLGD 157 (265)
T ss_pred cCccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC--CChHHHHHHHHHHHHHHcCCchhhhHHHhC
Confidence 987643 1 1345678999999988885 99999987643221 1112223455778888888742 2233
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 821 LVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 821 ~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
. ...||||||||++|||+|+.+|++++|||||+|||..+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 158 ~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~ 229 (265)
T PRK14252 158 L-----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDY 229 (265)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCE
Confidence 3 347999999999999999999999999999999999999999999999865 689999999985 35556666
No 425
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=2.9e-31 Score=257.71 Aligned_cols=181 Identities=24% Similarity=0.343 Sum_probs=153.5
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc----------------ccccce
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----------------ETFTRI 764 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 764 (1247)
+...+||+||+..+.|+.+.|+|.|||||||+|+||.-... +..|.|.+||..+.. ...+..
T Consensus 17 G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~ 94 (256)
T COG4598 17 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTR 94 (256)
T ss_pred ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHH
Confidence 45679999999999999999999999999999999987655 347999999975421 012334
Q ss_pred EEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000867 765 SGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVEL 844 (1247)
Q Consensus 765 ~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l 844 (1247)
.|+|+|...++..+||.||+.=+- .+. ...++.+..++.+..|+.+|+.+.+|.+. ..|||||+||++|||||
T Consensus 95 L~mVFQ~FNLWsHmtvLeNViEaP-vhV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIARaL 167 (256)
T COG4598 95 LGMVFQHFNLWSHMTVLENVIEAP-VHV-LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIARAL 167 (256)
T ss_pred hhHhhhhcchhHHHHHHHHHHhcc-hHh-hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHHHH
Confidence 699999999999999999985331 111 23455666677889999999999988764 36999999999999999
Q ss_pred hhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 845 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 845 ~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||...
T Consensus 168 ameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~ 213 (256)
T COG4598 168 AMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMG 213 (256)
T ss_pred hcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehh
Confidence 9999999999999999999999999999999999999999999764
No 426
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1e-30 Score=293.85 Aligned_cols=190 Identities=21% Similarity=0.286 Sum_probs=153.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---cccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++|++|++. +++..|+++|+.+.....+
T Consensus 37 ~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~ 113 (269)
T PRK13648 37 WTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHA 113 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcC
Confidence 47999999999999999999999887 99999999887532 22467999999874 6778899999988643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
.. ..+....++++++.+|+.+..+ ..+..||||||||++||
T Consensus 114 ~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 114 VP----------------------------------YDEMHRRVSEALKQVDMLERAD-----YEPNALSGGQKQRVAIA 154 (269)
T ss_pred CC----------------------------------HHHHHHHHHHHHHHcCCchhhh-----CCcccCCHHHHHHHHHH
Confidence 00 0001123566788899876544 34567999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||++.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+..++.. +|+|++|++|++++.|+++++.
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999987543 35566678888888875 9999999999999999987764
No 427
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.3e-31 Score=296.60 Aligned_cols=190 Identities=21% Similarity=0.298 Sum_probs=151.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-------VPQRTAAYISQHDV-HIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-------~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~ 72 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+...||+||+.+..
T Consensus 35 ~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~ 111 (280)
T PRK13649 35 YTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGP 111 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHH
Confidence 47999999999999999999999887 99999999876432 12457999999862 233469999998864
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcc-cccccccCCccccccccccc
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1247)
...+.. .++.+..++++++.+||.. ..+ +.+..|||||||
T Consensus 112 ~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LSgG~~q 152 (280)
T PRK13649 112 QNFGVS----------------------------------QEEAEALAREKLALVGISESLFE-----KNPFELSGGQMR 152 (280)
T ss_pred HHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhh-----CCcccCCHHHHH
Confidence 321100 0011123466788888863 233 445679999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
|++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|++++|+.+++...+|++++|++|++++.|+++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998754 2 566777899999999999999999999999999887
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 231 ~~~ 233 (280)
T PRK13649 231 DIF 233 (280)
T ss_pred HHh
Confidence 764
No 428
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.2e-31 Score=296.95 Aligned_cols=190 Identities=24% Similarity=0.325 Sum_probs=154.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC----cccceEEEeccccc-cCCCCCHHHHHHHHHhcc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF----VPQRTAAYISQHDV-HIGEMTVRETLAFSARCQ 75 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~----~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~ 75 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+...||.||+.|+....
T Consensus 38 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~ 114 (280)
T PRK13633 38 FLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL 114 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc
Confidence 47999999999999999999999987 99999999887532 22467999999863 233569999999864321
Q ss_pred CCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHH
Q 000867 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
+.. ..+.+..++++++.+||++..++. +..||||||||++|
T Consensus 115 ~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS~G~~qrv~l 155 (280)
T PRK13633 115 GIP----------------------------------PEEIRERVDESLKKVGMYEYRRHA-----PHLLSGGQKQRVAI 155 (280)
T ss_pred CCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCC-----cccCCHHHHHHHHH
Confidence 100 001122356788999998766554 45799999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||+|+.+|++++|||||+|||+.++..+.+.++++.+. .+++|++++|+.+++.. +|++++|++|++++.|+++++.
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999987653 35667778898888876 9999999999999999988875
No 429
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.7e-31 Score=296.00 Aligned_cols=190 Identities=24% Similarity=0.326 Sum_probs=153.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---cccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++. .++.+||+||+.++.....
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~ 113 (271)
T PRK13632 37 YVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKK 113 (271)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 99999999887532 23467999999863 5777899999988643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. . ..+.+..++++++.+||.+..++. ++.||||||||++||
T Consensus 114 ~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la 154 (271)
T PRK13632 114 V----P------------------------------PKKMKDIIDDLAKKVGMEDYLDKE-----PQNLSGGQKQRVAIA 154 (271)
T ss_pred C----C------------------------------HHHHHHHHHHHHHHcCCHHHhhCC-----cccCCHHHHHHHHHH
Confidence 0 0 001122356788899997655544 457999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+++.++++.+. ++++|++++|+.+++. .+|++++|++|++++.|+.+++.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999987653 3456666788887775 79999999999999999877654
No 430
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.9e-31 Score=296.08 Aligned_cols=190 Identities=28% Similarity=0.371 Sum_probs=152.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEecccccc-CCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVH-IGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~-~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.. +...|+.||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~ 105 (271)
T PRK13638 29 VTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRN 105 (271)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHH
Confidence 47999999999999999999999987 99999999886411 123579999998652 4456899999885432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+.. . .+....++++++.+||.+..++ .+..||||||||++
T Consensus 106 ~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrl~ 146 (271)
T PRK13638 106 LGVP----------E------------------------AEITRRVDEALTLVDAQHFRHQ-----PIQCLSHGQKKRVA 146 (271)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhcC-----CchhCCHHHHHHHH
Confidence 1100 0 0011234667888898765544 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.+++|++++|++|++++.|+++++.
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998754 3 456777899999999999999999999999999887654
No 431
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=5e-31 Score=286.13 Aligned_cols=179 Identities=28% Similarity=0.402 Sum_probs=144.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---cccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .++.+|++||+.++....+
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~ 105 (211)
T cd03225 29 FVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLG 105 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcC
Confidence 47999999999999999999999887 99999999876532 12467999999864 3667899999988643211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. . . .+.+..++++++.+||.+..+ +.+..|||||||||+||
T Consensus 106 ~----~------~------------------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~LSgG~~qrv~la 146 (211)
T cd03225 106 L----P------E------------------------EEIEERVEEALELVGLEGLRD-----RSPFTLSGGQKQRVAIA 146 (211)
T ss_pred C----C------H------------------------HHHHHHHHHHHHHcCcHhhhc-----CCcccCCHHHHHHHHHH
Confidence 0 0 0 001123466788889875444 34557999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCc
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQ 223 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~ 223 (1247)
|||+.+|++++|||||+|||+.++..+.+.++++.+ . +++|++++|+..++..+||++++|++|+
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 147 GVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999998765 2 5667778999999999999999999885
No 432
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=7.2e-31 Score=292.99 Aligned_cols=191 Identities=30% Similarity=0.427 Sum_probs=154.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++......
T Consensus 30 ~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 106 (258)
T PRK13548 30 VVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGL 106 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCC
Confidence 47999999999999999999999887 999999998764322 235699999998887889999999885321100
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
. .++.+..++++++.+||.+..++. +..|||||||||+|||
T Consensus 107 --~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 107 --S--------------------------------RAEDDALVAAALAQVDLAHLAGRD-----YPQLSGGEQQRVQLAR 147 (258)
T ss_pred --C--------------------------------cHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHH
Confidence 0 000112346678889997655544 4579999999999999
Q ss_pred HHh------cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 158 MMV------GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 158 al~------~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
||+ .+|++++|||||+|||+.++..+.+.|+++.+.. +.+|++++|+..++..++|+|++|++|++++.|+.+
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999999999999876333 456777899999999999999999999999999876
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 227 ~~~ 229 (258)
T PRK13548 227 EVL 229 (258)
T ss_pred HHh
Confidence 653
No 433
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.97 E-value=7e-31 Score=292.78 Aligned_cols=192 Identities=21% Similarity=0.272 Sum_probs=155.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC----------------cccceEEEeccccccCCCCCH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF----------------VPQRTAAYISQHDVHIGEMTV 64 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~----------------~~~~~i~yv~Q~~~~~~~lTv 64 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++..||
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 104 (252)
T TIGR03005 28 KVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTV 104 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccCCCCcH
Confidence 47999999999999999999999887 99999999876421 124679999999988989999
Q ss_pred HHHHHHHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCcccc
Q 000867 65 RETLAFSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRG 144 (1247)
Q Consensus 65 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 144 (1247)
.||+.++..... + .. ..+....++++++.+|+.+..+ +.+..
T Consensus 105 ~~nl~~~~~~~~-~--~~------------------------------~~~~~~~~~~~l~~~gl~~~~~-----~~~~~ 146 (252)
T TIGR03005 105 LDNVTEAPVLVL-G--MA------------------------------RAEAEKRAMELLDMVGLADKAD-----HMPAQ 146 (252)
T ss_pred HHHHHHHHHHhc-C--CC------------------------------HHHHHHHHHHHHHHcCChhHhh-----cChhh
Confidence 999987532100 0 00 0011123566788899875444 34567
Q ss_pred ccccccchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcE
Q 000867 145 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1247)
Q Consensus 145 LSGGqrqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v 224 (1247)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++.+++|++++|++|++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 225 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFAREFADRVCFFDKGRI 225 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653 356777789999999999999999999999
Q ss_pred EEecCcchHH
Q 000867 225 VYQGPRELVL 234 (1247)
Q Consensus 225 ~~~G~~~~~~ 234 (1247)
++.|+.+++.
T Consensus 226 ~~~g~~~~~~ 235 (252)
T TIGR03005 226 VEQGKPDEIF 235 (252)
T ss_pred EEeCCHHHHh
Confidence 9999877653
No 434
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.97 E-value=9.5e-31 Score=286.25 Aligned_cols=182 Identities=25% Similarity=0.328 Sum_probs=151.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .+.++|++|++.+++.+|++||+.+.....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~--- 100 (223)
T TIGR03740 28 VYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARENLKVHTTLLGL--- 100 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcCC---
Confidence 37999999999999999999999887 999999998765322 35799999998888889999999875432110
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
.+..+.++++.+||.+..+. .+..||||||||++||||++
T Consensus 101 -----------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~~rv~laral~ 140 (223)
T TIGR03740 101 -----------------------------------PDSRIDEVLNIVDLTNTGKK-----KAKQFSLGMKQRLGIAIALL 140 (223)
T ss_pred -----------------------------------CHHHHHHHHHHcCCcHHHhh-----hHhhCCHHHHHHHHHHHHHh
Confidence 00124567888898765443 45579999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.+.+|++++|++|++++.|++.
T Consensus 141 ~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 141 NHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred cCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 99999999999999999999999999998754 2 456777899999999999999999999999999754
No 435
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=8.5e-31 Score=293.80 Aligned_cols=192 Identities=23% Similarity=0.284 Sum_probs=154.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV------PQRTAAYISQHD--VHIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~------~~~~i~yv~Q~~--~~~~~lTv~e~l~f~~ 72 (1247)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+.+.+||+||+.+..
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 115 (265)
T TIGR02769 39 TVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPL 115 (265)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999987 999999998775322 235799999986 4567899999998753
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCccccccccccc
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1247)
.... . .. ..+....++++++.+||. ...+ +.+..|||||||
T Consensus 116 ~~~~---~------~~------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~~LSgGe~q 157 (265)
T TIGR02769 116 RHLT---S------LD------------------------ESEQKARIAELLDMVGLRSEDAD-----KLPRQLSGGQLQ 157 (265)
T ss_pred HHhc---C------CC------------------------HHHHHHHHHHHHHHcCCChhhhh-----CChhhCCHHHHH
Confidence 2110 0 00 001122356778889985 3333 445679999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+...+..++|++++|++|++++.|+++
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987653 3566777899999999999999999999999999987
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 764
No 436
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=7.4e-31 Score=253.40 Aligned_cols=181 Identities=25% Similarity=0.329 Sum_probs=152.2
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-------PQRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-------~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
++|||||||||||||-+++|+-.|+ +|+|.+.|+++.... ..+.+|+|+|.-.++|++|..||+...+.+
T Consensus 39 vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL 115 (228)
T COG4181 39 VAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLEL 115 (228)
T ss_pred EEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhh
Confidence 6999999999999999999999987 999999999875432 136899999999999999999999987776
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
++-+.+ +......+.|+.+||.+-.+ ..+.+|||||+|||+
T Consensus 116 ~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~-----HyP~qLSGGEQQRVA 156 (228)
T COG4181 116 RGESSA----------------------------------DSRAGAKALLEAVGLGKRLT-----HYPAQLSGGEQQRVA 156 (228)
T ss_pred cCCccc----------------------------------cHHHHHHHHHHHhCcccccc-----cCccccCchHHHHHH
Confidence 542110 11223456789999975432 356789999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEE
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVY 226 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~ 226 (1247)
||||+...|+|||-||||-.||.++..+|.+.+..+.++ .+++.+.++|+. .....|||.+-|.+|+++.
T Consensus 157 iARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 157 LARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhhhheeeeecceecc
Confidence 999999999999999999999999999999999988765 577788888876 5778899999999999874
No 437
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=9.3e-31 Score=288.22 Aligned_cols=191 Identities=24% Similarity=0.384 Sum_probs=156.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+..
T Consensus 27 ~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~- 102 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVD- 102 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCC-
Confidence 37999999999999999999999987 999999998875422 2467999999998898999999998864321100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
..+....++++++.+||.+..++. ++.||||||||++||||+
T Consensus 103 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral 144 (235)
T cd03299 103 ---------------------------------KKEIERKVLEIAEMLGIDHLLNRK-----PETLSGGEQQRVAIARAL 144 (235)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCChhHHhcC-----cccCCHHHHHHHHHHHHH
Confidence 001112345678889997655544 457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++..+.+.++++... .++++++++|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKE-FGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999987553 2556777899999999999999999999999999877654
No 438
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=99.97 E-value=4.1e-31 Score=335.52 Aligned_cols=196 Identities=27% Similarity=0.393 Sum_probs=159.3
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++|+|++++++.. +++++|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.|
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 469999999998521 124699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+++ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.+.++++..++.+. .|+.+|.
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige- 613 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGE- 613 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccC-
Confidence 754 446778999999998886 69999998652 1 222 2346677777777543 3566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.+.+||||||||++||||++++|+|++||||||+||++++..+.+ .. ..+++|+|+++|+++ ..+..|+
T Consensus 614 ~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~ 682 (711)
T TIGR00958 614 KGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQ 682 (711)
T ss_pred CCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCE
Confidence 346799999999999999999999999999999999999999988 22 235899999999985 4566777
No 439
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=291.12 Aligned_cols=198 Identities=22% Similarity=0.255 Sum_probs=154.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCCC---cccceEEEeccccccCCCCCHHHHHHHHHhcc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF---VPQRTAAYISQHDVHIGEMTVRETLAFSARCQ 75 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~ 75 (1247)
+++|+||||||||||+++|+|+.+|. ...+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~ 110 (250)
T PRK14247 31 ITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLN 110 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhc
Confidence 47999999999999999999998741 12389999999877532 22467999999988888999999999864321
Q ss_pred CCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHH
Q 000867 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTT 155 (1247)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsi 155 (1247)
.... . ..+..+.++++++.+||.+..... -++.+.+|||||||||+|
T Consensus 111 ~~~~--~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LSgG~~qrv~l 157 (250)
T PRK14247 111 RLVK--S------------------------------KKELQERVRWALEKAQLWDEVKDR-LDAPAGKLSGGQQQRLCI 157 (250)
T ss_pred cccC--C------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hcCCcccCCHHHHHHHHH
Confidence 1000 0 001122356678888885421111 134566899999999999
Q ss_pred HHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 156 GEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 156 A~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 158 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 158 ARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 9999999999999999999999999999999998732 456777899999999999999999999999999887754
No 440
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.1e-31 Score=293.61 Aligned_cols=198 Identities=27% Similarity=0.384 Sum_probs=161.7
Q ss_pred CCCCcEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEE
Q 000867 672 PFEPHSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITI 751 (1247)
Q Consensus 672 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i 751 (1247)
....+.++|+|+++.++ .++++|+||||++.||+.+|++||||+||||++++|.+.-+ ..+|.|.|
T Consensus 532 ~~~~G~i~fsnvtF~Y~------------p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~i 597 (790)
T KOG0056|consen 532 KVTQGKIEFSNVTFAYD------------PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSITI 597 (790)
T ss_pred cccCCeEEEEEeEEecC------------CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEEE
Confidence 34567899999999986 34689999999999999999999999999999999997654 45899999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHH--HHHH-HHcCCCccccccccCC
Q 000867 752 SGYPKKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFI--EEIM-ELVELNPLRQSLVGLP 825 (1247)
Q Consensus 752 ~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v--~~~l-~~l~l~~~~~~~~g~~ 825 (1247)
||++++. ...|+.+|.||||..++. -|+..|+.|+- | +.+.++..+.. ..+- +.++.-+-.++.||..
T Consensus 598 DgqdIrnvt~~SLRs~IGVVPQDtvLFN-dTI~yNIryak----~-~AsneevyaAAkAA~IHdrIl~fPegY~t~VGER 671 (790)
T KOG0056|consen 598 DGQDIRNVTQSSLRSSIGVVPQDTVLFN-DTILYNIRYAK----P-SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGER 671 (790)
T ss_pred cCchHHHHHHHHHHHhcCcccCcceeec-ceeeeheeecC----C-CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhc
Confidence 9999754 456778999999998886 48888888752 2 22333322211 1111 3466777778888865
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCCh
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
+. .|||||||||+|||+++++|.|++|||+||.||..+.+.|+..|.+++. ++|.|+++|+.|.
T Consensus 672 GL-kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLST 735 (790)
T KOG0056|consen 672 GL-KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLST 735 (790)
T ss_pred cc-ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehh
Confidence 43 5999999999999999999999999999999999999999999999874 7999999999874
No 441
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=3.8e-31 Score=336.42 Aligned_cols=189 Identities=24% Similarity=0.323 Sum_probs=149.7
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+||+|+||||||||+|+|+|+++|+ +|+|.+||+++++.. .++.++||+|++.+|+ .|++|||.++.. .
T Consensus 482 vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~-~--- 553 (686)
T TIGR03797 482 VAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP-L--- 553 (686)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCCC-C---
Confidence 7999999999999999999999987 999999999987543 3578999999988775 599999988521 0
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
+ ..++.+..+ .+. .++.++ .++++.||.+|++ +.+||||||||++||||
T Consensus 554 ---~-~e~i~~al~---------------~a~---------l~~~i~--~lp~G~dt~ige~-G~~LSGGQrQRialARA 602 (686)
T TIGR03797 554 ---T-LDEAWEAAR---------------MAG---------LAEDIR--AMPMGMHTVISEG-GGTLSGGQRQRLLIARA 602 (686)
T ss_pred ---C-HHHHHHHHH---------------HcC---------cHHHHH--hccccccccccCC-CCCCCHHHHHHHHHHHH
Confidence 0 001111110 000 111122 3688899999975 46899999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|+|++||||||+||+.++.++.+.+++. ++ |+++++|.. +..+.+|+|++|++|+++++|+++++.+
T Consensus 603 ll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~-T~IiItHr~-~~i~~~D~Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 603 LVRKPRILLFDEATSALDNRTQAIVSESLERL----KV-TRIVIAHRL-STIRNADRIYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CC-eEEEEecCh-HHHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999874 24 555577766 4556799999999999999999998763
No 442
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.2e-31 Score=292.95 Aligned_cols=195 Identities=17% Similarity=0.262 Sum_probs=151.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKL--KFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+|.. ..+|+|.++|+++... ..++.++|++|++.+++ +|++||+.++.+
T Consensus 40 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 118 (258)
T PRK14268 40 VTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPR 118 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 479999999999999999999987410 1389999999876421 12457999999988777 899999998643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+.. . .+.+..++++++.+|+....... -++.+..|||||||||
T Consensus 119 ~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 119 IHGAN----------K------------------------KDLDGVVENALRSAALWDETSDR-LKSPALSLSGGQQQRL 163 (258)
T ss_pred HcCCC----------H------------------------HHHHHHHHHHHHHcCCCcchhhh-hcCChhhCCHHHHHHH
Confidence 21100 0 00112245677888774211111 1345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.++++.+ +++|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998742 36677789999999999999999999999999988765
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 241 ~ 241 (258)
T PRK14268 241 F 241 (258)
T ss_pred h
Confidence 3
No 443
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.97 E-value=4.7e-31 Score=291.85 Aligned_cols=195 Identities=29% Similarity=0.429 Sum_probs=146.3
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.+.. .+++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~----------~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPS----------RPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDP--TSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCC----------CCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCC--CCCEEEECCEehhh
Confidence 46777766531 0124699999999999999999999999999999999998653 47999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCC
Q 000867 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPGES 828 (1247)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~~~ 828 (1247)
...++.++|++|++.+++ .|++|++.+....+ ..+. .++.++..++.+..+. ... ...+
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHHH----HHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223456899999988776 69999997643211 1111 1222333333221111 111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. +|+|||+++|++.. + +..|+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~-~-~~~d~ 206 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLST-I-RNADL 206 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCE
Confidence 799999999999999999999999999999999999999999999886 78999999999864 2 35666
No 444
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.8e-31 Score=292.77 Aligned_cols=196 Identities=20% Similarity=0.239 Sum_probs=150.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKL--KFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~--~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+++ +||+||+.++..
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~ 113 (254)
T PRK14273 35 ITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPK 113 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHH
Confidence 479999999999999999999998621 1389999999876421 22467999999987774 899999998643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+. .. ..+.++.+++.++.+++.+... ..-+..++.|||||||||
T Consensus 114 ~~~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~l~-~~~~~~~~~LSgG~~qrv 159 (254)
T PRK14273 114 IHGT---KD------------------------------KKKLDEIVEQSLKKSALWNEVK-DKLNTNALSLSGGQQQRL 159 (254)
T ss_pred hcCC---CC------------------------------HHHHHHHHHHHHHHhCCchhhH-HHHhCCcccCCHHHHHHH
Confidence 2110 00 0001123455667777632100 011334568999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.++++++|+.+++.+.+|++++|++|+++..|+++++
T Consensus 160 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 160 CIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--E-SYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999874 2 35677789999999999999999999999999988776
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 237 ~ 237 (254)
T PRK14273 237 F 237 (254)
T ss_pred H
Confidence 4
No 445
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=3e-31 Score=332.22 Aligned_cols=193 Identities=21% Similarity=0.361 Sum_probs=151.0
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
++|+||||||||||+++|+|+++|+ +|+|.+||.++++.. .++.++||||++.+|+ .|++|||.++..
T Consensus 372 ~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~----- 442 (582)
T PRK11176 372 VALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYART----- 442 (582)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-chHHHHHhcCCC-----
Confidence 7999999999999999999999997 999999999876543 3578999999988776 599999987521
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
+.++ .+...+++... -.++.++ .|+++.||.+|++ +.+||||||||++||||
T Consensus 443 ~~~~-------------------~~~i~~al~~~------~l~~~i~--~lp~Gldt~ig~~-g~~LSGGqrQRi~LARa 494 (582)
T PRK11176 443 EQYS-------------------REQIEEAARMA------YAMDFIN--KMDNGLDTVIGEN-GVLLSGGQRQRIAIARA 494 (582)
T ss_pred CCCC-------------------HHHHHHHHHHh------CcHHHHH--hcccccCceeCCC-CCcCCHHHHHHHHHHHH
Confidence 0000 00000000000 0112222 3788899999975 56899999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|+|++||||||+||+.++..+.+.+++.. . ++++++++|.. +..+.||+|++|++|++++.|+++++.+
T Consensus 495 ll~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~-~~tvI~VtHr~-~~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 495 LLRDSPILILDEATSALDTESERAIQAALDELQ--K-NRTSLVIAHRL-STIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred HHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--C-CCEEEEEecch-HHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999998753 2 34555567766 5667899999999999999999998864
No 446
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=1.7e-31 Score=257.07 Aligned_cols=186 Identities=23% Similarity=0.328 Sum_probs=156.1
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPF 777 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 777 (1247)
.+..+|+|+|+.+++||..+|.||||||||||+++++...++ .+|.+++.|.+.+. ..++..++||.|.+.+++.
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp--~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~ 91 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGD 91 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCC--CCceEEEcCccccccChHHHHHHHHHHHcCcccccc
Confidence 345699999999999999999999999999999999988763 58999999998753 5678889999999999985
Q ss_pred cCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCC
Q 000867 778 VTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPT 857 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEpt 857 (1247)
||.+|+.|.-.+|... ++ .....+.++.+++.+..-+. ....||||||||.+|+|-|..-|+||+|||||
T Consensus 92 -tVeDNlifP~~~r~rr-~d----r~aa~~llar~~l~~~~L~k----~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 92 -TVEDNLIFPWQIRNRR-PD----RAAALDLLARFALPDSILTK----NITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred -chhhccccchHHhccC-CC----hHHHHHHHHHcCCchhhhcc----hhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 9999999987766322 22 23355788888886543221 13469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHH-hCCCEEEEEeccCChHHHHhhhc
Q 000867 858 SGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 858 sgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|.||..+++.|-++|.++. .+++.++-++|++.. -...+|+
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dq-a~rha~k 203 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQ-AIRHADK 203 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHH-Hhhhhhe
Confidence 9999999999999999987 568999999999974 3467777
No 447
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.6e-30 Score=292.83 Aligned_cols=190 Identities=27% Similarity=0.367 Sum_probs=153.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDV-HIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|+++... ..++.++|++|++. .+...||.||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~ 106 (275)
T PRK13639 30 MVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLN 106 (275)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHH
Confidence 47999999999999999999999887 99999999887421 12467999999852 34457999999875321
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.+. . + .+....+.++++.+||.+..++. +..||||||||++
T Consensus 107 ~~~----~------~------------------------~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS~Gq~qrv~ 147 (275)
T PRK13639 107 LGL----S------K------------------------EEVEKRVKEALKAVGMEGFENKP-----PHHLSGGQKKRVA 147 (275)
T ss_pred cCC----C------H------------------------HHHHHHHHHHHHHCCCchhhcCC-----hhhCCHHHHHHHH
Confidence 100 0 0 01112356688999997655544 5579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+ . +.+|+.++|+.+.+.++||++++|++|++++.|+++++.
T Consensus 148 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 148 IAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999998754 3 566777899999999999999999999999999988764
No 448
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.97 E-value=1.1e-30 Score=287.52 Aligned_cols=185 Identities=24% Similarity=0.271 Sum_probs=149.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEec-cccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--VPQRTAAYIS-QHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--~~~~~i~yv~-Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+++.+|++||+.+.....+.
T Consensus 49 ~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~ 125 (236)
T cd03267 49 IVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDL 125 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999887 99999999865321 2345799997 556777889999999886432210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
. .++....++.+++.+||++..++.+ ..||||||||++||+
T Consensus 126 ~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~ 166 (236)
T cd03267 126 P----------------------------------PARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAA 166 (236)
T ss_pred C----------------------------------HHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHH
Confidence 0 0011123456788889987666554 469999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
||+.+|++++|||||+|||+.++..+.+.|+++.+. ++.+|++++|+.+++.+++|++++|++|++++.|
T Consensus 167 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 167 ALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999987653 3556777899999999999999999999998765
No 449
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.97 E-value=2.4e-29 Score=316.75 Aligned_cols=103 Identities=21% Similarity=0.327 Sum_probs=85.1
Q ss_pred HHHHhCCcccccccccCCccccccccccchhHHHHHHhcCC--eEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEE
Q 000867 123 YLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMVGPA--LALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVI 200 (1247)
Q Consensus 123 ~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~~~p--~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv 200 (1247)
.|..+||.... -++.+.+|||||||||.||++|..+| ++++|||||+|||+.....+++.|+++.+ . +.+|+
T Consensus 470 ~L~~vgL~~l~----l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~-~-G~TVI 543 (924)
T TIGR00630 470 FLIDVGLDYLT----LSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRD-L-GNTVI 543 (924)
T ss_pred hHhhccccccc----cCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHh-C-CCEEE
Confidence 36777885421 14566789999999999999999986 89999999999999999999999999854 3 55666
Q ss_pred EecCCChhHHhhcccEEEe------cCCcEEEecCcch
Q 000867 201 SLLQPAPETYDLFDDIILL------SDAQIVYQGPREL 232 (1247)
Q Consensus 201 ~~~~~~~~~~~~~D~v~~l------~~G~v~~~G~~~~ 232 (1247)
+++|+.+.+ ..||+|++| ++|++++.|++++
T Consensus 544 vVeHd~~~i-~~aD~vi~LgpgaG~~~G~Iv~~g~~~e 580 (924)
T TIGR00630 544 VVEHDEETI-RAADYVIDIGPGAGIHGGEVVASGTPEE 580 (924)
T ss_pred EEECCHHHH-hhCCEEEEecccccCCCCEEeeccCHHH
Confidence 688887766 489999999 8999998886544
No 450
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.5e-31 Score=292.43 Aligned_cols=196 Identities=21% Similarity=0.286 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+|||||||||||++|+|..+ |....+|+|.++|+++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 34 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 112 (253)
T PRK14242 34 VTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLR 112 (253)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHH
Confidence 479999999999999999999864 1001389999999877431 12467999999988777 599999998653
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+... . +..++.+++.++.+||.+...+.. ++.+..|||||||||
T Consensus 113 ~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrv 158 (253)
T PRK14242 113 VNGVKD---------K------------------------AYLAERVERSLRHAALWDEVKDRL-HESALGLSGGQQQRL 158 (253)
T ss_pred HcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHHHHH
Confidence 221000 0 001123455677777753211111 345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+.+++.+++|+|++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~--~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-A--RYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c--CCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999873 2 35677789999999999999999999999999987765
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 236 ~ 236 (253)
T PRK14242 236 F 236 (253)
T ss_pred H
Confidence 3
No 451
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.97 E-value=1.1e-30 Score=286.86 Aligned_cols=182 Identities=25% Similarity=0.304 Sum_probs=146.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|+.||+.+...
T Consensus 38 ~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~ 114 (228)
T PRK10584 38 TIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPAL 114 (228)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHH
Confidence 47999999999999999999999887 9999999987754321 2479999999888888999999988543
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
.... . ..+.+..++++++.+||.+..+. .+..||||||||+
T Consensus 115 ~~~~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~Ge~qrl 155 (228)
T PRK10584 115 LRGE----S------------------------------SRQSRNGAKALLEQLGLGKRLDH-----LPAQLSGGEQQRV 155 (228)
T ss_pred hcCC----C------------------------------HHHHHHHHHHHHHHcCCHhHhhC-----ChhhCCHHHHHHH
Confidence 2110 0 00112235677889999765444 3457999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEE
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVY 226 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~ 226 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.++++++.. +.+|++++|+.+.+ ..+|++++|++|++++
T Consensus 156 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 156 ALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLRLVNGQLQE 226 (228)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999876533 45666688888776 5599999999999875
No 452
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.97 E-value=6e-31 Score=285.81 Aligned_cols=185 Identities=24% Similarity=0.388 Sum_probs=144.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccC--CCCCHHHHHHHHHhccCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHI--GEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~--~~lTv~e~l~f~~~~~~~~ 78 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++. ..++.++|++|++.+. ..+||+||+.++.....
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~-- 99 (213)
T cd03235 27 FLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHK-- 99 (213)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCcHHHHHHhcccccc--
Confidence 47999999999999999999999887 999999998654 2346799999987653 34799999987532110
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
..+... ..+.+..++++++.+||++..++ .+..||||||||++||||
T Consensus 100 ~~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LSgG~~qrv~la~a 146 (213)
T cd03235 100 GLFRRL----------------------------SKADKAKVDEALERVGLSELADR-----QIGELSGGQQQRVLLARA 146 (213)
T ss_pred ccccCC----------------------------CHHHHHHHHHHHHHcCCHHHHhC-----CcccCCHHHHHHHHHHHH
Confidence 000000 00011235677888999755444 445799999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEec
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQG 228 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G 228 (1247)
|+.+|++++|||||+|||+.++..+.+.++++++ .++++++++|+.+++.+.+|++++|++| +++.|
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999998764 3566777899999999999999999886 66554
No 453
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=7.9e-31 Score=290.66 Aligned_cols=189 Identities=25% Similarity=0.320 Sum_probs=152.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCC---------CcccceEEEeccccccCCCCCHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE---------FVPQRTAAYISQHDVHIGEMTVRETLAFS 71 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~---------~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~ 71 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.. ...++.++|++|++.+++.+||.||+.+.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~ 106 (242)
T PRK11124 30 TLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEA 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHH
Confidence 47999999999999999999999887 9999999987521 01245799999999899999999999753
Q ss_pred H-hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCcccccccccc
Q 000867 72 A-RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 72 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1247)
. ...+.. ..+....++++++.+||++..+. .+..||||||
T Consensus 107 ~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~-----~~~~LS~G~~ 147 (242)
T PRK11124 107 PCRVLGLS----------------------------------KDQALARAEKLLERLRLKPYADR-----FPLHLSGGQQ 147 (242)
T ss_pred HHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhC-----ChhhCCHHHH
Confidence 2 111100 00011235677888999755443 4557999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
||++||||++.+|++++|||||+|||+.++..+.+.++++.+ .++++++++|+..++.+.+|++++|++|++++.|++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~ 225 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998743 356677789999999999999999999999999987
Q ss_pred chH
Q 000867 231 ELV 233 (1247)
Q Consensus 231 ~~~ 233 (1247)
++.
T Consensus 226 ~~~ 228 (242)
T PRK11124 226 SCF 228 (242)
T ss_pred HHh
Confidence 653
No 454
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=5e-31 Score=330.35 Aligned_cols=192 Identities=20% Similarity=0.265 Sum_probs=150.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++.. .++.++||+|++.+|+. |++|||.++...
T Consensus 369 ~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~~~--- 441 (592)
T PRK10790 369 FVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGRDI--- 441 (592)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCCCC---
Confidence 37999999999999999999999997 999999999886543 35789999999888875 999999985210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
+ ..++.+.. +.+ -.++.++ .|+++.||.+|+. +.+||||||||++|||
T Consensus 442 ----~-d~~i~~a~---------------~~~---------gl~~~i~--~lp~Gldt~i~e~-g~~LSGGqrQRialAR 489 (592)
T PRK10790 442 ----S-EEQVWQAL---------------ETV---------QLAELAR--SLPDGLYTPLGEQ-GNNLSVGQKQLLALAR 489 (592)
T ss_pred ----C-HHHHHHHH---------------HHc---------CcHHHHH--hccccccccccCC-CCCCCHHHHHHHHHHH
Confidence 0 00010000 000 0111222 2678899999974 5579999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
||+++|+|++||||||+||+.++..|.+.+++..+ ++ ++++++|.. +....+|+|++|++|++++.|+++++.+
T Consensus 490 aLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~-tvIivtHr~-~~l~~~D~ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 490 VLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HT-TLVVIAHRL-STIVEADTILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CC-EEEEEecch-HHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999988642 34 455567765 5566799999999999999999999863
No 455
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=99.97 E-value=8e-31 Score=327.93 Aligned_cols=197 Identities=26% Similarity=0.356 Sum_probs=161.6
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++. ++.+|+|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~ 398 (588)
T PRK13657 333 GAVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTD 398 (588)
T ss_pred CeEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEE
Confidence 46999999998741 13599999999999999999999999999999999998763 47999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
... ..+++.++|++|++.+++ -|++||+.++. + +.++ +.++++++.+++.+. .|+.+|.
T Consensus 399 i~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~-~~~d----~~i~~al~~~~l~~~i~~lp~gldt~i~~- 467 (588)
T PRK13657 399 IRTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR----P-DATD----EEMRAAAERAQAHDFIERKPDGYDTVVGE- 467 (588)
T ss_pred hhhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhCcccccchhcC-
Confidence 654 355678999999998886 59999997641 1 2222 235566666665442 3555654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
.++.||||||||++|||||+++|+|++||||||+||+.++..+.+.|++.. +++|+|++||+++ ..+..|+.
T Consensus 468 ~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~--~~~~~D~i 539 (588)
T PRK13657 468 RGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLS--TVRNADRI 539 (588)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHH--HHHhCCEE
Confidence 345799999999999999999999999999999999999999999998874 4799999999984 56778873
No 456
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=291.13 Aligned_cols=198 Identities=19% Similarity=0.272 Sum_probs=153.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCC--C---cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDE--F---VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~--~---~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++.. . ..++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (253)
T PRK14267 32 VFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVK 111 (253)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHH
Confidence 47999999999999999999998762 1238999999988741 1 224579999999988989999999988653
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
....... ..+....++++++.+||....... -++.+..||||||||+
T Consensus 112 ~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LS~G~~qrv 158 (253)
T PRK14267 112 LNGLVKS--------------------------------KKELDERVEWALKKAALWDEVKDR-LNDYPSNLSGGQRQRL 158 (253)
T ss_pred hcCccCC--------------------------------HHHHHHHHHHHHHHcCCccchhhh-hccChhhCCHHHHHHH
Confidence 2110000 000111245567777774321111 1345678999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++..++|+|++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998743 3 5677789999999999999999999999999988765
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 236 ~ 236 (253)
T PRK14267 236 F 236 (253)
T ss_pred H
Confidence 4
No 457
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.4e-31 Score=289.35 Aligned_cols=186 Identities=22% Similarity=0.332 Sum_probs=151.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---cccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++ .||+||+.++.....
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~- 105 (241)
T PRK14250 31 IYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKG- 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhcC-
Confidence 47999999999999999999999887 99999999876432 22467999999988776 699999987432110
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCccccccccccchhHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. ....++++++.+||+ +..+ +.+..||||||||++||
T Consensus 106 -~------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~qrl~la 143 (241)
T PRK14250 106 -E------------------------------------KNVDVEYYLSIVGLNKEYAT-----RDVKNLSGGEAQRVSIA 143 (241)
T ss_pred -c------------------------------------HHHHHHHHHHHcCCCHHHhh-----CCcccCCHHHHHHHHHH
Confidence 0 001245678888885 2333 34567999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.+|+|++|++|+++..|+++++.
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999987553 3456777899999999999999999999999999887653
No 458
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=99.97 E-value=3.1e-30 Score=317.51 Aligned_cols=199 Identities=24% Similarity=0.290 Sum_probs=159.1
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcC-----
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG----- 753 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g----- 753 (1247)
+++|+++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~ 68 (520)
T TIGR03269 2 EVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEK 68 (520)
T ss_pred EEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccc
Confidence 5678887663 2459999999999999999999999999999999999741013479999872
Q ss_pred ------------------ccCC----------c---ccccceEEEeccC-CCCCCCcCHHHHHHHHhhccCCCCCCHHHH
Q 000867 754 ------------------YPKK----------Q---ETFTRISGYCEQN-DIHSPFVTVYESLLYSAWLRLPPEVDSETQ 801 (1247)
Q Consensus 754 ------------------~~~~----------~---~~~~~~~~~v~q~-~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~ 801 (1247)
.++. . ...++.++|++|+ +.+++.+||+|++.+..... ..+.++.
T Consensus 69 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~ 145 (520)
T TIGR03269 69 CGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKEA 145 (520)
T ss_pred ccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 1110 0 1134568999997 67888899999998865432 1233444
Q ss_pred HHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCC
Q 000867 802 KMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGR 880 (1247)
Q Consensus 802 ~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~-~g~ 880 (1247)
++++.++++.+||.+..+..+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .|+
T Consensus 146 ~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 220 (520)
T TIGR03269 146 VGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGI 220 (520)
T ss_pred HHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCc
Confidence 567889999999987777665 46999999999999999999999999999999999999999999999865 489
Q ss_pred EEEEEeccCChHHHHhhhc
Q 000867 881 TVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 881 tvi~~~H~~~~~~~~~fd~ 899 (1247)
|||+++|++.. +.+..|+
T Consensus 221 tviivtHd~~~-~~~~~d~ 238 (520)
T TIGR03269 221 SMVLTSHWPEV-IEDLSDK 238 (520)
T ss_pred EEEEEeCCHHH-HHHhcCE
Confidence 99999999863 4455666
No 459
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=99.97 E-value=2.1e-30 Score=277.91 Aligned_cols=168 Identities=26% Similarity=0.304 Sum_probs=138.5
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.....+.+|+|.+||.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~ 68 (200)
T cd03217 2 EIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITD 68 (200)
T ss_pred eEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCc
Confidence 5677776653 235999999999999999999999999999999999974211357999999988653
Q ss_pred c---cc-cceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHH
Q 000867 759 E---TF-TRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQ 834 (1247)
Q Consensus 759 ~---~~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGq 834 (1247)
. .. ++.++|++|++.+++..|+++++. .. .+.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l~----------------------------------~~-----~~~LS~G~ 109 (200)
T cd03217 69 LPPEERARLGIFLAFQYPPEIPGVKNADFLR----------------------------------YV-----NEGFSGGE 109 (200)
T ss_pred CCHHHHhhCcEEEeecChhhccCccHHHHHh----------------------------------hc-----cccCCHHH
Confidence 2 12 345899999988888888877650 00 13599999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHH-hhhc
Q 000867 835 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-SFDE 899 (1247)
Q Consensus 835 r~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~-~fd~ 899 (1247)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+ ..|+
T Consensus 110 ~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~ 174 (200)
T cd03217 110 KKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDR 174 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCE
Confidence 99999999999999999999999999999999999999998777899999999986 3433 4676
No 460
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=99.97 E-value=1.1e-30 Score=274.82 Aligned_cols=162 Identities=27% Similarity=0.445 Sum_probs=136.1
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.+.. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~~~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 68 (178)
T cd03247 2 SINNVSFSYPE-----------QEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKP--QQGEITLDGVPVSD 68 (178)
T ss_pred EEEEEEEEeCC-----------CCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCEEHHH
Confidence 56788776531 113599999999999999999999999999999999998653 47999999986532
Q ss_pred --ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHH
Q 000867 759 --ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRK 836 (1247)
Q Consensus 759 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~ 836 (1247)
..+++.++|++|++.+++ .|++||+ ...|||||||
T Consensus 69 ~~~~~~~~i~~~~q~~~~~~-~tv~~~i------------------------------------------~~~LS~G~~q 105 (178)
T cd03247 69 LEKALSSLISVLNQRPYLFD-TTLRNNL------------------------------------------GRRFSGGERQ 105 (178)
T ss_pred HHHHHHhhEEEEccCCeeec-ccHHHhh------------------------------------------cccCCHHHHH
Confidence 234567899999987775 6888876 1359999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 837 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 837 r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|++|||||+.+|++++|||||+|||+.++..+++.|+++. +++|||+++|++.. + +..|+
T Consensus 106 rv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~ 165 (178)
T cd03247 106 RLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVL-KDKTLIWITHHLTG-I-EHMDK 165 (178)
T ss_pred HHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999885 58999999999864 3 34555
No 461
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=9.7e-31 Score=293.23 Aligned_cols=201 Identities=22% Similarity=0.301 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC--------cccceEEEeccccccCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF--------VPQRTAAYISQHDVHIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~--------~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1247)
+++|+||||||||||+++|+|.++|+...+|+|.++|+++... ..++.++|++|++.+++.+||+||+.++.
T Consensus 32 ~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~ 111 (262)
T PRK09984 32 MVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGA 111 (262)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhh
Confidence 4799999999999999999999987522369999999876431 11356999999988899899999998753
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccch
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKR 152 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1247)
... .. .... .... ...+.+..++++++.+||++..+. .+..||||||||
T Consensus 112 ~~~-----~~----~~~~--~~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qr 160 (262)
T PRK09984 112 LGS-----TP----FWRT--CFSW---------------FTREQKQRALQALTRVGMVHFAHQ-----RVSTLSGGQQQR 160 (262)
T ss_pred ccc-----cc----chhh--hccc---------------ccHHHHHHHHHHHHHcCCHHHHhC-----CccccCHHHHHH
Confidence 210 00 0000 0000 000112345678899999765544 445799999999
Q ss_pred hHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 153 vsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
|+|||||+.+|++++|||||+|||..++..+.+.|+++.+. .+++|++++|+.+++...+|++++|++|++++.|++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~ 239 (262)
T PRK09984 161 VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239 (262)
T ss_pred HHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999997653 35677778999999999999999999999999998765
Q ss_pred H
Q 000867 233 V 233 (1247)
Q Consensus 233 ~ 233 (1247)
+
T Consensus 240 ~ 240 (262)
T PRK09984 240 F 240 (262)
T ss_pred h
Confidence 3
No 462
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=99.97 E-value=1.4e-30 Score=322.52 Aligned_cols=198 Identities=30% Similarity=0.438 Sum_probs=158.6
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++. +++.+|+|+|++++|||+++|+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 315 ~~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~ 381 (544)
T TIGR01842 315 GHLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGAD 381 (544)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEe
Confidence 46999999998741 124699999999999999999999999999999999998763 47999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-------LRQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~ 825 (1247)
... ..+++.++||+|++.+++. |++||+.+.. .+.+.++ ++++++..++.+ -.|+.+|.
T Consensus 382 i~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~~----~~~~~~~~~~~~~i~~l~~gl~t~~~~- 450 (544)
T TIGR01842 382 LKQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPEK----IIEAAKLAGVHELILRLPDGYDTVIGP- 450 (544)
T ss_pred hhhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHHH----HHHHHHHhChHHHHHhCccccccccCC-
Confidence 653 3456789999999998875 9999997432 1222222 334444444332 22555553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
...+||||||||++|||||+++|++++|||||||||++++..+.+.|+++..+|+|+|+++|+++ ..+.+|+
T Consensus 451 ~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~ 522 (544)
T TIGR01842 451 GGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDK 522 (544)
T ss_pred CcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCE
Confidence 34679999999999999999999999999999999999999999999988656899999999995 4566777
No 463
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.3e-31 Score=295.99 Aligned_cols=193 Identities=24% Similarity=0.301 Sum_probs=154.1
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV-HIGEMTVRETLAFSARCQG 76 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~-~~~~lTv~e~l~f~~~~~~ 76 (1247)
+++|+||||||||||+++|+|.++|+...+|+|.++|+++.... .++.++|++|++. .++..||+||+.|.....+
T Consensus 35 ~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~ 114 (282)
T PRK13640 35 WTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRA 114 (282)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCC
Confidence 47999999999999999999999886112399999999875422 2457999999864 5778899999988543211
Q ss_pred CCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHH
Q 000867 77 VGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTG 156 (1247)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA 156 (1247)
. . .++.++.++++++.+||.+..+ +.++.||||||||++||
T Consensus 115 ~----------~------------------------~~~~~~~~~~~l~~~~L~~~~~-----~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 115 V----------P------------------------RPEMIKIVRDVLADVGMLDYID-----SEPANLSGGQKQRVAIA 155 (282)
T ss_pred C----------C------------------------HHHHHHHHHHHHHHCCChhHhc-----CCcccCCHHHHHHHHHH
Confidence 0 0 0111224567889999976544 44568999999999999
Q ss_pred HHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 157 EMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 157 ~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+.+ ..||++++|++|++++.|+++++.
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999987653 355677788888887 579999999999999999987764
No 464
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.97 E-value=7.5e-31 Score=285.29 Aligned_cols=180 Identities=21% Similarity=0.318 Sum_probs=146.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHhc-
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSARC- 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~- 74 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|++||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~ 104 (213)
T cd03262 28 VVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKV 104 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999887 99999999876421 1246799999999888889999999885321
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhH
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
++. . ..+....++++++.+|+++..+. .+..||||||||++
T Consensus 105 ~~~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G~~qrv~ 145 (213)
T cd03262 105 KGM----S------------------------------KAEAEERALELLEKVGLADKADA-----YPAQLSGGQQQRVA 145 (213)
T ss_pred cCC----C------------------------------HHHHHHHHHHHHHHcCCHhHhhh-----CccccCHHHHHHHH
Confidence 100 0 00111234667888898765443 45579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcE
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQI 224 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v 224 (1247)
|||||+.+|++++|||||+|||+.++..+.+.++++.+ . ++++++++|+.+++.+++|++++|++|++
T Consensus 146 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 146 IARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998764 3 45677789999999999999999999974
No 465
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=8.5e-31 Score=289.53 Aligned_cols=193 Identities=26% Similarity=0.384 Sum_probs=146.9
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.+||.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~v~~~g~~~~~ 67 (236)
T cd03253 2 EFENVTFAYD------------PGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYD--VSSGSILIDGQDIRE 67 (236)
T ss_pred EEEEEEEEeC------------CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCEEEECCEEhhh
Confidence 5677776652 12359999999999999999999999999999999999865 347999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCC
Q 000867 759 ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPGES 828 (1247)
Q Consensus 759 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~~~ 828 (1247)
..+++.++|++|+..+++ .|++||+.+... ...... +.+.++..++.+..+. ... ...+
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~----~~~~~~~~~l~~~~~~l~~~~~~~~~-~~~~ 136 (236)
T cd03253 68 VTLDSLRRAIGVVPQDTVLFN-DTIGYNIRYGRP-----DATDEE----VIEAAKAAQIHDKIMRFPDGYDTIVG-ERGL 136 (236)
T ss_pred CCHHHHHhhEEEECCCChhhc-chHHHHHhhcCC-----CCCHHH----HHHHHHHcCcHHHHHhccccccchhh-cCCC
Confidence 234567899999988876 699999977531 111111 2233333343322111 111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ |.|||+++|++..- ...|+
T Consensus 137 ~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~--~~~d~ 204 (236)
T cd03253 137 KLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLSTI--VNADK 204 (236)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHH--HhCCE
Confidence 7999999999999999999999999999999999999999999998876 89999999998642 23555
No 466
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.97 E-value=2.3e-30 Score=287.58 Aligned_cols=197 Identities=23% Similarity=0.273 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCC--CCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKL--DSKLKFSGRVTYNGHGMDEFVP----QRTAAYISQHDVHIGEMTVRETLAFSARC 74 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~--~~~~~~~G~v~~~g~~~~~~~~----~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~ 74 (1247)
+++|+||||||||||+++|+|.. +|+ +|+|.++|+++..... +..++|++|++.+++.+|++||+.+....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~ 104 (243)
T TIGR01978 28 IHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNA 104 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHH
Confidence 47999999999999999999995 565 9999999987654221 23489999999999999999999886432
Q ss_pred cCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcc-cccccccCCccc-cccccccch
Q 000867 75 QGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEV-CDDTLVGDEMVR-GISGGQKKR 152 (1247)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~-~LSGGqrqR 152 (1247)
...... ... ....+....++++++.+||++ ..+. .+. +||||||||
T Consensus 105 ~~~~~~------------------~~~---------~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~~~LS~G~~qr 152 (243)
T TIGR01978 105 RRSARG------------------EEP---------LDLLDFLKLLKAKLALLGMDEEFLNR-----SVNEGFSGGEKKR 152 (243)
T ss_pred hhcccc------------------ccc---------ccHHHHHHHHHHHHHHcCCchhhccc-----ccccCcCHHHHHH
Confidence 110000 000 000111224567889999973 3333 333 499999999
Q ss_pred hHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhh-cccEEEecCCcEEEecCcc
Q 000867 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDL-FDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 153 vsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~-~D~v~~l~~G~v~~~G~~~ 231 (1247)
|+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|++++|+.+.+... +|++++|++|++++.|+++
T Consensus 153 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 153 NEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 9999999999999999999999999999999999998754 355677789999999888 8999999999999999887
Q ss_pred hHH
Q 000867 232 LVL 234 (1247)
Q Consensus 232 ~~~ 234 (1247)
++.
T Consensus 231 ~~~ 233 (243)
T TIGR01978 231 LAK 233 (243)
T ss_pred Hhc
Confidence 543
No 467
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=1.3e-30 Score=248.55 Aligned_cols=191 Identities=25% Similarity=0.344 Sum_probs=159.6
Q ss_pred EEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCC
Q 000867 678 LTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 757 (1247)
Q Consensus 678 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 757 (1247)
+..+++++.+ +..++|.||+++.+.||.+.++||||||||||++.|.-... +.+|+..|.|...+
T Consensus 3 irv~~in~~y-------------g~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd 67 (242)
T COG4161 3 IQLNGINCFY-------------GAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred eEEccccccc-------------ccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccc
Confidence 4566666554 34579999999999999999999999999999999976443 34788888775321
Q ss_pred -------c--ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 758 -------Q--ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 758 -------~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
+ ...++.+|.|+|.-.++|.+||.|||.=+ -+|. ...++++.+.+..++++.+.|.+.+|... -
T Consensus 68 ~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enliea-p~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p-----l 140 (242)
T COG4161 68 FSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEA-PCRV-LGLSKDQALARAEKLLKRLRLKPYADRYP-----L 140 (242)
T ss_pred cccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhh-hHHH-hCCCHHHHHHHHHHHHHHhccccccccCc-----e
Confidence 1 23567899999999999999999998543 2332 24556677778899999999999999874 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
.|||||+|||+|||||+.+|.+|++||||+.||++-..++++++++++..|.|-++++|.-.
T Consensus 141 hlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~ 202 (242)
T COG4161 141 HLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVE 202 (242)
T ss_pred ecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehh
Confidence 59999999999999999999999999999999999999999999999999999999999753
No 468
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.5e-31 Score=297.07 Aligned_cols=191 Identities=20% Similarity=0.270 Sum_probs=151.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCC--------CcccceEEEeccccc-cCCCCCHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDE--------FVPQRTAAYISQHDV-HIGEMTVRETLAFS 71 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~--------~~~~~~i~yv~Q~~~-~~~~lTv~e~l~f~ 71 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ...++.++|++|++. .+...||+||+.|+
T Consensus 39 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~ 115 (289)
T PRK13645 39 VTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFG 115 (289)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHH
Confidence 47999999999999999999999887 9999999987631 122457999999863 23346999999886
Q ss_pred HhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCcccccccccc
Q 000867 72 ARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQK 150 (1247)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1247)
....+. . .++....++.+++.++|+ ...+ +.+..||||||
T Consensus 116 ~~~~~~----~------------------------------~~~~~~~~~~ll~~~~L~~~~~~-----~~~~~LS~Gq~ 156 (289)
T PRK13645 116 PVNLGE----N------------------------------KQEAYKKVPELLKLVQLPEDYVK-----RSPFELSGGQK 156 (289)
T ss_pred HHHcCC----C------------------------------HHHHHHHHHHHHHHcCCChhHhc-----CChhhCCHHHH
Confidence 432110 0 000112345678888884 3333 44567999999
Q ss_pred chhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCc
Q 000867 151 KRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPR 230 (1247)
Q Consensus 151 qRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~ 230 (1247)
|||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+.||++++|++|++++.|+.
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999987653 356677789999999999999999999999999988
Q ss_pred chHH
Q 000867 231 ELVL 234 (1247)
Q Consensus 231 ~~~~ 234 (1247)
+++.
T Consensus 236 ~~~~ 239 (289)
T PRK13645 236 FEIF 239 (289)
T ss_pred HHHh
Confidence 7654
No 469
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=99.97 E-value=4.7e-31 Score=337.21 Aligned_cols=190 Identities=23% Similarity=0.301 Sum_probs=149.0
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
++|+||||||||||+++|+|+++|+ +|+|.+||.++++.. .++.++||+|++.+|+ .|++|||.++..
T Consensus 508 vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~~----- 578 (710)
T TIGR03796 508 VALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWDP----- 578 (710)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCCC-----
Confidence 7999999999999999999999987 999999999886543 4688999999988775 599999987421
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
.. +.+...+++... -.++.++ .++++.||.+|++ +.+||||||||++||||
T Consensus 579 -~~-------------------~~~~i~~al~~~------~l~~~i~--~lp~gl~t~i~e~-G~~LSGGQrQRiaLARa 629 (710)
T TIGR03796 579 -TI-------------------PDADLVRACKDA------AIHDVIT--SRPGGYDAELAEG-GANLSGGQRQRLEIARA 629 (710)
T ss_pred -CC-------------------CHHHHHHHHHHh------CCHHHHH--hCcCcccceeccC-CCCCCHHHHHHHHHHHH
Confidence 00 000111111000 0111222 3778899999965 46899999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|+++|+|++||||||+||+.++.++.+.+++ . ++|+++++|..+ ....+|+|++|++|++++.|+++++.+
T Consensus 630 ll~~p~iliLDEptS~LD~~te~~i~~~l~~----~-~~T~IiitHrl~-~i~~~D~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 630 LVRNPSILILDEATSALDPETEKIIDDNLRR----R-GCTCIIVAHRLS-TIRDCDEIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred HhhCCCEEEEECccccCCHHHHHHHHHHHHh----c-CCEEEEEecCHH-HHHhCCEEEEEeCCEEEEecCHHHHHH
Confidence 9999999999999999999999999999975 2 345555777764 456699999999999999999999864
No 470
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.8e-31 Score=263.85 Aligned_cols=181 Identities=26% Similarity=0.428 Sum_probs=157.5
Q ss_pred cccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCC
Q 000867 701 DKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFTRISGYCEQNDIHSPF 777 (1247)
Q Consensus 701 ~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 777 (1247)
+++.+|+++|..|++|.+++|+|||||||||||.++++..+. .+|+|+++|.++.. ....+..+..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~--d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKK--DSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccc--cCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 457899999999999999999999999999999999987663 48999999998754 2345566788898888888
Q ss_pred cCHHHHHHHHhhccCCC--CCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000867 778 VTVYESLLYSAWLRLPP--EVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDE 855 (1247)
Q Consensus 778 ltv~e~l~~~~~~~~~~--~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDE 855 (1247)
+||+|-+.|+ |.|. ....++.+..++++++.++|.+..|... .+||||||||.-||+.++++.+.++|||
T Consensus 90 lTV~dLv~FG---RfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDE 161 (252)
T COG4604 90 LTVRDLVGFG---RFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDE 161 (252)
T ss_pred eEHHHHhhcC---CCcccCCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecC
Confidence 9999999887 3332 2233455677999999999999999886 3699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCCh
Q 000867 856 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSI 891 (1247)
Q Consensus 856 ptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~ 891 (1247)
|.++||..-+..+|+.||+++++ |+||+++.||-+.
T Consensus 162 PLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf 198 (252)
T COG4604 162 PLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF 198 (252)
T ss_pred cccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH
Confidence 99999999999999999999876 9999999999864
No 471
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=99.97 E-value=3.8e-30 Score=266.82 Aligned_cols=155 Identities=28% Similarity=0.416 Sum_probs=131.2
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 2 ~~~~~~~~~~------------~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~---- 63 (166)
T cd03223 2 ELENLSLATP------------DGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPW--GSGRIGMPEG---- 63 (166)
T ss_pred EEEEEEEEcC------------CCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCC----
Confidence 5677777652 123599999999999999999999999999999999998653 4799999873
Q ss_pred ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHH
Q 000867 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRL 838 (1247)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~ 838 (1247)
+.++|++|++.++ ..|++||+.+. . .+.||||||||+
T Consensus 64 ----~~i~~~~q~~~~~-~~tv~~nl~~~---------------------------------~-----~~~LS~G~~~rv 100 (166)
T cd03223 64 ----EDLLFLPQRPYLP-LGTLREQLIYP---------------------------------W-----DDVLSGGEQQRL 100 (166)
T ss_pred ----ceEEEECCCCccc-cccHHHHhhcc---------------------------------C-----CCCCCHHHHHHH
Confidence 5689999998764 57999998642 0 246999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 839 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 839 ~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+|||+|+.+|++++|||||+|||+.++..+.+.++++ ++|+|+++|++.. ....|+
T Consensus 101 ~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~---~~tiiivsh~~~~--~~~~d~ 156 (166)
T cd03223 101 AFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKEL---GITVISVGHRPSL--WKFHDR 156 (166)
T ss_pred HHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHh---CCEEEEEeCChhH--HhhCCE
Confidence 9999999999999999999999999999999999876 5899999999852 345555
No 472
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2.6e-30 Score=284.27 Aligned_cols=191 Identities=24% Similarity=0.314 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV-PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~-~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|+++.... .++.++|++|++..++.+|++||+.++....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~- 103 (232)
T cd03300 28 FFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKKLP- 103 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999987 899999998775432 2467999999998888899999998865322100
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
.......++.+++.+||.+..++ .+..||||||||++||||+
T Consensus 104 ---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~lS~G~~qrl~laral 145 (232)
T cd03300 104 ---------------------------------KAEIKERVAEALDLVQLEGYANR-----KPSQLSGGQQQRVAIARAL 145 (232)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCCchhhcC-----ChhhCCHHHHHHHHHHHHH
Confidence 00011234667888999765554 3457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++..+.+.++++.+. .+.+|++++|+..++.+.+|++++|++|++++.|+.+++.
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~ 219 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKE-LGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIY 219 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHH
Confidence 9999999999999999999999999999987653 2556666889888999999999999999999999876653
No 473
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.5e-30 Score=289.78 Aligned_cols=195 Identities=17% Similarity=0.245 Sum_probs=152.0
Q ss_pred CEEEeCCCCCChHHHHhHHhCC---CCCCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGK---LDSKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSA 72 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~---~~~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~ 72 (1247)
+++|+||||||||||+++|+|. .++. ..+|+|.++|+++... ..++.++|++|++.+++ .|++||+.++.
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~ 108 (250)
T PRK14245 31 VVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGL 108 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHH
Confidence 4799999999999999999996 3331 1389999999887532 22457999999988776 69999998864
Q ss_pred hccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccch
Q 000867 73 RCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKR 152 (1247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1247)
...+... . ......++++++.+||.+...+.. ++.+..||||||||
T Consensus 109 ~~~~~~~------~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qr 154 (250)
T PRK14245 109 RVNGVKD------N---------------------------AFIRQRVEETLKGAALWDEVKDKL-KESAFALSGGQQQR 154 (250)
T ss_pred HHcCCCc------H---------------------------HHHHHHHHHHHHHcCCCcchhhhh-hCCcccCCHHHHHH
Confidence 3221000 0 001123466788888864321222 34566899999999
Q ss_pred hHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcch
Q 000867 153 VTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPREL 232 (1247)
Q Consensus 153 vsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~ 232 (1247)
++|||||+.+|++++|||||+|||+.++..+.+.|+++. . +++|++++|+.+++.+.+|++++|++|++++.|++++
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~--~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-K--DYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c--CCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999873 2 3567778999999999999999999999999998887
Q ss_pred HH
Q 000867 233 VL 234 (1247)
Q Consensus 233 ~~ 234 (1247)
+.
T Consensus 232 ~~ 233 (250)
T PRK14245 232 IF 233 (250)
T ss_pred Hh
Confidence 64
No 474
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=291.68 Aligned_cols=195 Identities=22% Similarity=0.344 Sum_probs=155.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++..|++||+.++..-..
T Consensus 35 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~- 110 (265)
T PRK10253 35 FTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQ- 110 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCccccc-
Confidence 47999999999999999999999887 999999998764322 23569999999888888999999987421000
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
..... . .+.....++++++.+||.+..+ +.+..||||||||++|||
T Consensus 111 -~~~~~---~-------------------------~~~~~~~~~~~l~~~~l~~~~~-----~~~~~LS~Gq~qrv~lar 156 (265)
T PRK10253 111 -PLFTR---W-------------------------RKEDEEAVTKAMQATGITHLAD-----QSVDTLSGGQRQRAWIAM 156 (265)
T ss_pred -ccccC---C-------------------------CHHHHHHHHHHHHHcCCHHHhc-----CCcccCChHHHHHHHHHH
Confidence 00000 0 0001123567788899975444 445679999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+..++.+++|++++|++|++++.|+++++.
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999987653 3566777899999999999999999999999999887654
No 475
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.8e-30 Score=288.29 Aligned_cols=197 Identities=17% Similarity=0.234 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|+.+|....+|+|.++|+++.... .++.++|++|++.+++ .||+||+.++...++.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~ 108 (246)
T PRK14269 30 ITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGM 108 (246)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCc
Confidence 47899999999999999999997521123899999999875432 2467999999988876 6999999886432210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
.. . .......++.+++.++|.+...... ++.++.|||||||||+|||
T Consensus 109 ~~--~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~lar 155 (246)
T PRK14269 109 IK--N------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQNALALSGGQQQRLCIAR 155 (246)
T ss_pred cc--C------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cCCcccCCHHHHHHHHHHH
Confidence 00 0 0001123456788888853211111 3456789999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
||+.+|++++|||||+|||+.++..+.+.++++. . ++++++++|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 156 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 156 ALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--H-NLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFF 229 (246)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--C-CCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999864 2 456777899999999999999999999999999887654
No 476
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.4e-30 Score=261.16 Aligned_cols=198 Identities=26% Similarity=0.290 Sum_probs=167.0
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+.+++.. ++.||++||++|++||+.+||||||||||||.++|+|.+....++|+|.++|.++
T Consensus 3 ~L~I~dLhv~v~~------------~keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI 70 (251)
T COG0396 3 MLEIKDLHVEVEG------------KKEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDI 70 (251)
T ss_pred eeEEeeeEEEecC------------chhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCccc
Confidence 4789999988752 2479999999999999999999999999999999999987777899999999987
Q ss_pred Cc----ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCC
Q 000867 757 KQ----ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNP-LRQSLVGLPGESGLS 831 (1247)
Q Consensus 757 ~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lS 831 (1247)
.. ++.++-+...+|.|.-+|-.|+.+-|..+.+.+........+..+.+++.++.+++.+ ..++.+. .|+|
T Consensus 71 ~~l~~~ERAr~GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN----~GFS 146 (251)
T COG0396 71 LELSPDERARAGIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVN----EGFS 146 (251)
T ss_pred ccCCHhHHHhcCCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccC----CCcC
Confidence 53 2234456788999999999999999987765433221112334456788999999987 5566554 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCC
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 890 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 890 (1247)
||||||..|+.+++.+|++.+||||-||||..+-+.|-+.++.+..+|++++++||..+
T Consensus 147 GGEkKR~EilQ~~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~r 205 (251)
T COG0396 147 GGEKKRNEILQLLLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQR 205 (251)
T ss_pred cchHHHHHHHHHHhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHHH
Confidence 99999999999999999999999999999999999999999999988999999999864
No 477
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=8e-31 Score=325.68 Aligned_cols=186 Identities=25% Similarity=0.403 Sum_probs=149.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.++|+||||||||||+++|+|.++|+ +|+|.+||.++++.. .++.++||+|++.+|+ .|++|||.++..-
T Consensus 368 ~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~~~--- 440 (574)
T PRK11160 368 KVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAAPN--- 440 (574)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCCCc---
Confidence 37999999999999999999999987 999999999876543 3578999999988776 5999999885210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCC------cccccccccCCccccccccccc
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGL------EVCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~~t~vg~~~~~~LSGGqrq 151 (1247)
... + .+.+.++..++ +++.||.||++ +..|||||||
T Consensus 441 ---------~~~-------------~---------------~i~~al~~~~l~~~i~~p~GldT~vge~-g~~LSgGqrq 482 (574)
T PRK11160 441 ---------ASD-------------E---------------ALIEVLQQVGLEKLLEDDKGLNAWLGEG-GRQLSGGEQR 482 (574)
T ss_pred ---------cCH-------------H---------------HHHHHHHHcCCHHHHcCccccCchhcCC-CCCCCHHHHH
Confidence 000 0 01111222222 67889999965 5679999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
|++||||++++|++++||||||+||+.++..+.+.+++.. . ++++++++|..+.+ ..+|+|++|++|++++.|+++
T Consensus 483 RialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~-~~tviiitHr~~~~-~~~d~i~~l~~G~i~~~g~~~ 558 (574)
T PRK11160 483 RLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--Q-NKTVLMITHRLTGL-EQFDRICVMDNGQIIEQGTHQ 558 (574)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--C-CCEEEEEecChhHH-HhCCEEEEEeCCeEEEeCCHH
Confidence 9999999999999999999999999999999999998863 2 34555567766555 569999999999999999999
Q ss_pred hHHH
Q 000867 232 LVLD 235 (1247)
Q Consensus 232 ~~~~ 235 (1247)
++.+
T Consensus 559 ~l~~ 562 (574)
T PRK11160 559 ELLA 562 (574)
T ss_pred HHHh
Confidence 8864
No 478
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=99.97 E-value=9.1e-31 Score=327.54 Aligned_cols=199 Identities=26% Similarity=0.351 Sum_probs=163.0
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
..++++|++++++. .++++|+|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEe
Confidence 46999999998741 124699999999999999999999999999999999998763 47999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 000867 756 KKQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL-------RQSLVGLP 825 (1247)
Q Consensus 756 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 825 (1247)
+++ ..+++.++|++|++.+++ -|++||+.+.. +.+.+ +++++++++.+|+.+. .|+.+|..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 653 345677999999998876 59999997642 11222 2346677887777543 35566643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhcC
Q 000867 826 GESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEG 900 (1247)
Q Consensus 826 ~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~~ 900 (1247)
.+.||||||||++||||++++|+|++||||||+||..++..+.+.|++.. +++|+|++||+++ ..+.+|+.
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~i 537 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRI 537 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEE
Confidence 46799999999999999999999999999999999999999999999874 5799999999984 56677773
No 479
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.97 E-value=1.8e-30 Score=291.22 Aligned_cols=192 Identities=20% Similarity=0.226 Sum_probs=153.6
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc--cCCCCCHHHHHHHHHhcc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDV--HIGEMTVRETLAFSARCQ 75 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~--~~~~lTv~e~l~f~~~~~ 75 (1247)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +.+.+|+.|++.+..+..
T Consensus 41 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~ 117 (267)
T PRK15112 41 TLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN 117 (267)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc
Confidence 47999999999999999999999987 999999998765321 1346999999864 567789999998754321
Q ss_pred CCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCc-ccccccccCCccccccccccchhH
Q 000867 76 GVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLE-VCDDTLVGDEMVRGISGGQKKRVT 154 (1247)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRvs 154 (1247)
.. .. ..+..+.++++++.+||. ...+ ..+..|||||||||+
T Consensus 118 ~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~LS~G~~qrv~ 159 (267)
T PRK15112 118 TD---LE------------------------------PEQREKQIIETLRQVGLLPDHAS-----YYPHMLAPGQKQRLG 159 (267)
T ss_pred cC---CC------------------------------HHHHHHHHHHHHHHcCCChHHHh-----cCchhcCHHHHHHHH
Confidence 00 00 001112356788999994 3333 344579999999999
Q ss_pred HHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 155 TGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 155 iA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..+||++++|++|++++.|+.+++.
T Consensus 160 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 160 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVL 238 (267)
T ss_pred HHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHh
Confidence 999999999999999999999999999999999997653 3566777899999999999999999999999999877654
No 480
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=99.97 E-value=1.1e-29 Score=282.73 Aligned_cols=203 Identities=20% Similarity=0.258 Sum_probs=159.5
Q ss_pred cEEEEEeEEEEEecCc----hhhh--ccc-cccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEE
Q 000867 676 HSLTFDEVTYSVDMPK----EMKL--QGI-LEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGN 748 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~----~~~~--~~~-~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~ 748 (1247)
+.+.++|++..++... ..+. ... ...++.+|+|+|++++|||+++|+||||||||||+++|+|..++ .+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceE
Confidence 4678888876655421 1111 011 22456799999999999999999999999999999999998653 4799
Q ss_pred EEEcCccCCcccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 000867 749 ITISGYPKKQETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSLVGLPGES 828 (1247)
Q Consensus 749 i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 828 (1247)
|.++|. +++++|+..+.+.+|+.||+.+..... ....+...+.++++++.+++.+..+..+ +
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----K 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----c
Confidence 999984 356677776777899999998754332 1223444456778888899987776654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 829 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 829 ~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
.||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~ 212 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTK 212 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCE
Confidence 69999999999999999999999999999999999999999999998777999999999975 34445565
No 481
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2e-30 Score=298.52 Aligned_cols=202 Identities=16% Similarity=0.155 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC-CceeeEEEECCccCCCCcc-------cceEEEeccccc--cCCCCCHHHHHHH
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK-LKFSGRVTYNGHGMDEFVP-------QRTAAYISQHDV--HIGEMTVRETLAF 70 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~-~~~~G~v~~~g~~~~~~~~-------~~~i~yv~Q~~~--~~~~lTv~e~l~f 70 (1247)
+++|+|+||||||||+++|+|+.++. ...+|+|.++|+++..... ++.++||+|++. +.+.+||.+++.+
T Consensus 35 ~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~ 114 (330)
T PRK15093 35 IRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQ 114 (330)
T ss_pred EEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHH
Confidence 47999999999999999999998631 1248999999988754321 246999999865 5778899999976
Q ss_pred HHhccCC-CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccc
Q 000867 71 SARCQGV-GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQ 149 (1247)
Q Consensus 71 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1247)
....... +..+. . ..+.+..+.++|+.+||.+..+ +.++.+..|||||
T Consensus 115 ~~~~~~~~~~~~~---~--------------------------~~~~~~~~~~~L~~~gL~~~~~--~~~~~p~~LSgG~ 163 (330)
T PRK15093 115 NIPGWTYKGRWWQ---R--------------------------FGWRKRRAIELLHRVGIKDHKD--AMRSFPYELTEGE 163 (330)
T ss_pred HHHhhhccccccc---c--------------------------HHHHHHHHHHHHHHCCCCChHH--HHhCCchhCCHHH
Confidence 4221000 00000 0 0011234567899999974321 2245677899999
Q ss_pred cchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecC
Q 000867 150 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGP 229 (1247)
Q Consensus 150 rqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~ 229 (1247)
||||+|||||+.+|+++++||||+|||+.++.++++.|+++.+. .+.++++++|+...+.+++|+|++|++|++++.|+
T Consensus 164 ~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~ 242 (330)
T PRK15093 164 CQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWADKINVLYCGQTVETAP 242 (330)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999997653 35677789999999999999999999999999999
Q ss_pred cchHH
Q 000867 230 RELVL 234 (1247)
Q Consensus 230 ~~~~~ 234 (1247)
.+++.
T Consensus 243 ~~~i~ 247 (330)
T PRK15093 243 SKELV 247 (330)
T ss_pred HHHHH
Confidence 88764
No 482
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.8e-30 Score=291.37 Aligned_cols=197 Identities=19% Similarity=0.305 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+|. ...+|+|.++|+++... ..++.++|++|++.+++. ||+||+.++..
T Consensus 47 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 125 (267)
T PRK14235 47 VTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPR 125 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHH
Confidence 47999999999999999999998741 01389999999887421 224679999999887774 99999998653
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
.++... . + .+....++++++.+||.+...... ++.+..||||||||+
T Consensus 126 ~~~~~~--~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrv 172 (267)
T PRK14235 126 IHGLAR--S------K------------------------AELDEIVETSLRKAGLWEEVKDRL-HEPGTGLSGGQQQRL 172 (267)
T ss_pred hccccc--c------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHHHHH
Confidence 221100 0 0 001123466788888854211111 345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|++++|+.+.+...+|++++|++|+++..|+.+++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~---~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ---NYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKM 249 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc---CCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998743 35677789999999999999999999999999987765
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 250 ~ 250 (267)
T PRK14235 250 F 250 (267)
T ss_pred H
Confidence 3
No 483
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.97 E-value=2.4e-30 Score=282.98 Aligned_cols=196 Identities=24% Similarity=0.321 Sum_probs=152.3
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 756 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 756 (1247)
.++++|+++.++. .++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 68 (221)
T cd03244 2 DIEFKNVSLRYRP-----------NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVE--LSSGSILIDGVDI 68 (221)
T ss_pred cEEEEEEEEecCC-----------CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCCEEEECCEEh
Confidence 4778899877631 12469999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccccc-cc-----CCCC
Q 000867 757 KQ---ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQSL-VG-----LPGE 827 (1247)
Q Consensus 757 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-~g-----~~~~ 827 (1247)
.. ..+++.++|++|++.+++ .|++||+.+.. ... .+.+.+.++.+++.+..+.. .| ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~------~~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 137 (221)
T cd03244 69 SKIGLHDLRSRISIIPQDPVLFS-GTIRSNLDPFG------EYS----DEELWQALERVGLKEFVESLPGGLDTVVEEGG 137 (221)
T ss_pred HhCCHHHHhhhEEEECCCCcccc-chHHHHhCcCC------CCC----HHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 42 234567999999988776 59999986421 111 12345666767765543321 00 1134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 828 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 828 ~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
..||+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|||+++|++.. + ...|+
T Consensus 138 ~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~ 206 (221)
T cd03244 138 ENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLDT-I-IDSDR 206 (221)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHH-H-hhCCE
Confidence 67999999999999999999999999999999999999999999998754 6899999999854 2 23555
No 484
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.97 E-value=2.4e-30 Score=285.39 Aligned_cols=191 Identities=25% Similarity=0.379 Sum_probs=155.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP-QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 79 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~-~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~ 79 (1247)
+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+|++||+.+.....+.
T Consensus 28 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~-- 102 (237)
T TIGR00968 28 LVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRKH-- 102 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHHHHHHhHHHhcCC--
Confidence 37899999999999999999999886 9999999988754322 46799999999888889999999886432110
Q ss_pred ccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHH
Q 000867 80 RYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMM 159 (1247)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al 159 (1247)
. . ......++++++.+++....++ ..+.||||||||++|||+|
T Consensus 103 --~------~------------------------~~~~~~~~~~l~~~~l~~~~~~-----~~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 103 --P------K------------------------AKIKARVEELLELVQLEGLGDR-----YPNQLSGGQRQRVALARAL 145 (237)
T ss_pred --C------H------------------------HHHHHHHHHHHHHcCCHhHhhC-----ChhhCCHHHHHHHHHHHHH
Confidence 0 0 0011234667888888654443 4457999999999999999
Q ss_pred hcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHH
Q 000867 160 VGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVL 234 (1247)
Q Consensus 160 ~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~ 234 (1247)
+.+|++++|||||+|||+.++..+.+.+++.... .++++++++|...++.+.+|++++|++|++++.|+.+++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999987542 3566777889888999999999999999999999887764
No 485
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.97 E-value=4.1e-30 Score=280.16 Aligned_cols=181 Identities=24% Similarity=0.336 Sum_probs=140.2
Q ss_pred cceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCC
Q 000867 703 LMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFTRISGYCEQNDIHS 775 (1247)
Q Consensus 703 ~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~ 775 (1247)
+.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.++
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (218)
T cd03290 14 LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQT--LEGKVHWSNKNESEPSFEATRSRNRYSVAYAAQKPWLL 91 (218)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCcccccccccccchhhcceEEEEcCCCccc
Confidence 4699999999999999999999999999999999998653 47999999986532 12345689999998877
Q ss_pred CCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000867 776 PFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQS-------LVGLPGESGLSTEQRKRLTIAVELVANP 848 (1247)
Q Consensus 776 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~~~~lSgGqr~r~~ia~~l~~~p 848 (1247)
..|++||+.+... ...+ ..+++++.+++.+..+. ..+ .....||||||||++|||+|+.+|
T Consensus 92 -~~t~~~nl~~~~~------~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 92 -NATVEENITFGSP------FNKQ----RYKAVTDACSLQPDIDLLPFGDQTEIG-ERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred -cccHHHHHhhcCc------CCHH----HHHHHHHHhCcHHHHHhCcCccccCcc-cCCCcCCHHHHHHHHHHHHHhhCC
Confidence 5799999976421 1111 23455666666443221 111 124579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHH--HHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 849 SIIFMDEPTSGLDARAAAIVMR--TVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 849 ~il~lDEptsgLD~~~~~~i~~--~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
++++|||||+|||+.+...+++ .++.+.++|.|+|+++|++.. + ...|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~-~-~~~d~ 210 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQY-L-PHADW 210 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHH-H-hhCCE
Confidence 9999999999999999999998 566555568999999999964 3 34554
No 486
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.97 E-value=2.9e-30 Score=278.29 Aligned_cols=181 Identities=22% Similarity=0.407 Sum_probs=137.5
Q ss_pred EEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCc
Q 000867 679 TFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 758 (1247)
Q Consensus 679 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 758 (1247)
+++|+++.+.... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|
T Consensus 2 ~~~~l~~~~~~~~--------~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~--~~~G~i~~~g----- 66 (204)
T cd03250 2 SVEDASFTWDSGE--------QETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELE--KLSGSVSVPG----- 66 (204)
T ss_pred EEeEEEEecCCCC--------ccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCCeEEEcC-----
Confidence 5778877653100 001359999999999999999999999999999999999865 3479999998
Q ss_pred ccccceEEEeccCCCCCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccc-------ccccCCCCCCCC
Q 000867 759 ETFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPLRQ-------SLVGLPGESGLS 831 (1247)
Q Consensus 759 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~~~-------~~~g~~~~~~lS 831 (1247)
.++|++|++.+++ .|++||+.+... ...+ ...+.++.+++.+..+ +... .....||
T Consensus 67 -----~i~~~~q~~~l~~-~t~~enl~~~~~------~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~lS 129 (204)
T cd03250 67 -----SIAYVSQEPWIQN-GTIRENILFGKP------FDEE----RYEKVIKACALEPDLEILPDGDLTEIG-EKGINLS 129 (204)
T ss_pred -----EEEEEecCchhcc-CcHHHHhccCCC------cCHH----HHHHHHHHcCcHHHHHhccCcccceec-CCCCcCC
Confidence 4799999998874 699999976421 1111 1223344444332111 1121 1245799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeccCCh
Q 000867 832 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR-TVRNTVDTGRTVVCTIHQPSI 891 (1247)
Q Consensus 832 gGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~-~l~~~~~~g~tvi~~~H~~~~ 891 (1247)
+|||||++|||+|+.+|++++|||||+|||+.+...+.+ ++++..++|+|||+++|++..
T Consensus 130 ~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~ 190 (204)
T cd03250 130 GGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQL 190 (204)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHH
Confidence 999999999999999999999999999999999999988 566665668999999999853
No 487
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=1.3e-30 Score=266.60 Aligned_cols=192 Identities=22% Similarity=0.328 Sum_probs=167.9
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSR 80 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~ 80 (1247)
|.+++|||||||||.+++|+|.++|+ +|+|.++|.+++.. .+.+|||+|.+--+++.+||.|.|.|-++++++..
T Consensus 30 i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~- 104 (300)
T COG4152 30 IFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPK- 104 (300)
T ss_pred EEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhh-hhhhcccChhhhccCccCcHHHHHHHHHHhcCCcH-
Confidence 57899999999999999999999997 99999999987653 24579999999999999999999999999987521
Q ss_pred cchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHHHh
Q 000867 81 YDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEMMV 160 (1247)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~al~ 160 (1247)
++.+...+.+|+++++..... +++.+||.|.+|++-+-.+++
T Consensus 105 ---------------------------------~e~~~~~~~wLer~~i~~~~~-----~kIk~LSKGnqQKIQfisavi 146 (300)
T COG4152 105 ---------------------------------AEIQKKLQAWLERLEIVGKKT-----KKIKELSKGNQQKIQFISAVI 146 (300)
T ss_pred ---------------------------------HHHHHHHHHHHHhcccccccc-----chHHHhhhhhhHHHHHHHHHh
Confidence 223345678899999876554 456689999999999999999
Q ss_pred cCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHH
Q 000867 161 GPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1247)
Q Consensus 161 ~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f 237 (1247)
++|++++||||+|||||-+.+-+-+.+.++.. .+.+|+..+|.+..+.++||++++|++|+.|.+|+.+++.+-|
T Consensus 147 HePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 147 HEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred cCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhc
Confidence 99999999999999999999999899988754 4677777899999999999999999999999999999998644
No 488
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=5.1e-31 Score=298.73 Aligned_cols=185 Identities=25% Similarity=0.359 Sum_probs=149.1
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
+||+|+||||||||+++|+|..+|+ +|+|++||.++.... .++.+++++|...+| ..|+|||+..+..-
T Consensus 367 vAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~~~---- 438 (573)
T COG4987 367 VAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLF-SGTLRDNLRLANPD---- 438 (573)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcCCC----
Confidence 7999999999999999999999997 999999999876543 357899999976655 55999999985321
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhC-------CcccccccccCCccccccccccc
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLG-------LEVCDDTLVGDEMVRGISGGQKK 151 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-------L~~~~~t~vg~~~~~~LSGGqrq 151 (1247)
++.+ ...+.++.+| .+++.||.+|+ .++.|||||||
T Consensus 439 --------AsDE----------------------------el~~aL~qvgL~~l~~~~p~gl~t~lge-~G~~LSGGE~r 481 (573)
T COG4987 439 --------ASDE----------------------------ELWAALQQVGLEKLLESAPDGLNTWLGE-GGRRLSGGERR 481 (573)
T ss_pred --------CCHH----------------------------HHHHHHHHcCHHHHHHhChhhhhchhcc-CCCcCCchHHH
Confidence 0000 0111222222 45678899985 56689999999
Q ss_pred hhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcc
Q 000867 152 RVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRE 231 (1247)
Q Consensus 152 RvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~ 231 (1247)
|++|||+|++++++++|||||.|||+.|+.++++.+.+.++ +++++.+||+... .+.||+|++|++|++++.|+++
T Consensus 482 RLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~---~kTll~vTHrL~~-le~~drIivl~~Gkiie~G~~~ 557 (573)
T COG4987 482 RLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE---GKTLLMVTHRLRG-LERMDRIIVLDNGKIIEEGTHA 557 (573)
T ss_pred HHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc---CCeEEEEeccccc-HhhcCEEEEEECCeeeecCCHH
Confidence 99999999999999999999999999999999999987543 4556667887755 4668999999999999999999
Q ss_pred hHHH
Q 000867 232 LVLD 235 (1247)
Q Consensus 232 ~~~~ 235 (1247)
++..
T Consensus 558 ~Ll~ 561 (573)
T COG4987 558 ELLA 561 (573)
T ss_pred hhhc
Confidence 8863
No 489
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.1e-30 Score=290.70 Aligned_cols=194 Identities=23% Similarity=0.328 Sum_probs=154.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC---cccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF---VPQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~---~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||.||+.++.... .
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~-~ 114 (265)
T PRK10575 39 VTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPW-H 114 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccc-c
Confidence 47999999999999999999999886 99999999876432 22357999999988888899999998742100 0
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
. .... . ....+..++.+++.++|++..++. +..|||||||||+|||
T Consensus 115 ~-~~~~--------------~--------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~lar 160 (265)
T PRK10575 115 G-ALGR--------------F--------------GAADREKVEEAISLVGLKPLAHRL-----VDSLSGGERQRAWIAM 160 (265)
T ss_pred c-cccC--------------C--------------CHHHHHHHHHHHHHcCCHHHhcCC-----cccCCHHHHHHHHHHH
Confidence 0 0000 0 000112356778889997654444 4579999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.+|+|++|++|++++.|+.+++
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 999999999999999999999999999999987653 245677789999999999999999999999999987665
No 490
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.9e-30 Score=287.85 Aligned_cols=197 Identities=18% Similarity=0.271 Sum_probs=153.2
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|+++ |....+|+|.++|+++... ..++.++|++|++.+++.+|++||+.++.+
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (252)
T PRK14256 32 VTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYK 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHH
Confidence 479999999999999999999985 3211389999999876421 234679999999888988999999987543
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+. .+ . .+.+..+++.++.+|+........ +..+..||||||||+
T Consensus 112 ~~~~---~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrl 157 (252)
T PRK14256 112 LNGR---VN------R------------------------SEADEIVESSLKRVALWDEVKDRL-KSNAMELSGGQQQRL 157 (252)
T ss_pred hcCC---CC------H------------------------HHHHHHHHHHHHHcCCchhhhHHh-hCCcCcCCHHHHHHH
Confidence 2110 00 0 001123456777888753211111 234668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++.++.+.|+++.+ + ++|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 158 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 158 CIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998753 3 5677789999999999999999999999999988775
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 235 ~ 235 (252)
T PRK14256 235 F 235 (252)
T ss_pred H
Confidence 3
No 491
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=99.97 E-value=8.1e-31 Score=332.87 Aligned_cols=191 Identities=25% Similarity=0.368 Sum_probs=147.4
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFV---PQRTAAYISQHDVHIGEMTVRETLAFSARCQGV 77 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~---~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~ 77 (1247)
.++|+||||||||||+++|+|+++|+ +|+|.+||+++++.. .++.++||+|++.+|. .|++|||.++..-
T Consensus 509 ~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~~~--- 581 (711)
T TIGR00958 509 VVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGLTD--- 581 (711)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCCCC---
Confidence 37999999999999999999999997 999999999886543 3578999999988775 5999999885210
Q ss_pred CCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHH
Q 000867 78 GSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGE 157 (1247)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~ 157 (1247)
.+ ..+..+.. +.+. .++.++ .|+++.||.+|++ +.+||||||||++|||
T Consensus 582 ---~~-~e~i~~al---------------~~a~---------l~~~i~--~lp~GldT~ige~-G~~LSGGQkQRlalAR 630 (711)
T TIGR00958 582 ---TP-DEEIMAAA---------------KAAN---------AHDFIM--EFPNGYDTEVGEK-GSQLSGGQKQRIAIAR 630 (711)
T ss_pred ---CC-HHHHHHHH---------------HHcC---------CHHHHH--hCCCccCCcccCC-CCcCCHHHHHHHHHHH
Confidence 00 00010000 0000 111222 3677899999965 5689999999999999
Q ss_pred HHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHH
Q 000867 158 MMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLD 235 (1247)
Q Consensus 158 al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~ 235 (1247)
|++++|+|++||||||+||+.++..+.+ ... ..++|+++++|..+ ....+|+|++|++|++++.|+++++.+
T Consensus 631 ALl~~p~ILILDEpTSaLD~~te~~i~~-~~~----~~~~TvIiItHrl~-~i~~aD~IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 631 ALVRKPRVLILDEATSALDAECEQLLQE-SRS----RASRTVLLIAHRLS-TVERADQILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred HHhcCCCEEEEEccccccCHHHHHHHHH-hhc----cCCCeEEEEeccHH-HHHhCCEEEEEECCEEEEeeCHHHHHh
Confidence 9999999999999999999999998888 221 13456666788765 457799999999999999999999864
No 492
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.8e-30 Score=295.39 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=173.2
Q ss_pred cEEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCcc
Q 000867 676 HSLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 755 (1247)
Q Consensus 676 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 755 (1247)
.-++.+|++.++. ..++|+||||+++|||++||+|.||||||||+|+|+|-.. +.+|+|.+||.+
T Consensus 7 ~ll~~~~i~K~Fg-------------gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~ 71 (500)
T COG1129 7 PLLELRGISKSFG-------------GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKP 71 (500)
T ss_pred ceeeeecceEEcC-------------CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEE
Confidence 3577888876653 4579999999999999999999999999999999999766 348999999998
Q ss_pred CCcc----cccceEEEeccCCCCCCCcCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCC
Q 000867 756 KKQE----TFTRISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGL 830 (1247)
Q Consensus 756 ~~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 830 (1247)
.... ....-++.|.|+..+.|++||.||+.++...+.+ .-.+.....++..++++.+|+....++.++ .|
T Consensus 72 ~~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~L 146 (500)
T COG1129 72 VAFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DL 146 (500)
T ss_pred ccCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hC
Confidence 6532 2334589999999999999999999766443321 224566667778899999999644777775 59
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 831 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 831 SgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
|.||||.|.|||||..+++||+||||||+|+......+.+.++++.++|.+||+++|... |+|+.-|+
T Consensus 147 siaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~Dr 214 (500)
T COG1129 147 SIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADR 214 (500)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999999999999999999999774 89999998
No 493
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3e-30 Score=287.53 Aligned_cols=196 Identities=19% Similarity=0.283 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+|. ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.|+..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~ 110 (251)
T PRK14270 32 ITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPR 110 (251)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHH
Confidence 47999999999999999999998641 11389999999887431 12467999999988776 899999998643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+... . .+....++++++.+||.+..... -++.+..||||||||+
T Consensus 111 ~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 111 IHGIKD---------K------------------------KELDKIVEWALKKAALWDEVKDD-LKKSALKLSGGQQQRL 156 (251)
T ss_pred hcCCCc---------H------------------------HHHHHHHHHHHHHcCCchhhhhH-hhCCcccCCHHHHHHH
Confidence 221000 0 00112345567777774211111 1345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+||||++.+|++++|||||+|||+.++.++.+.|+++.+ + .+|++++|+.+++.+.+|++++|++|++++.|+.+++
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 999999999999999999999999999999999998753 3 5667788999999999999999999999999988876
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 234 ~ 234 (251)
T PRK14270 234 F 234 (251)
T ss_pred h
Confidence 4
No 494
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=7.2e-31 Score=254.99 Aligned_cols=190 Identities=21% Similarity=0.271 Sum_probs=158.4
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCC----------c------ccceEEEeccccccCCCCCHH
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEF----------V------PQRTAAYISQHDVHIGEMTVR 65 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~----------~------~~~~i~yv~Q~~~~~~~lTv~ 65 (1247)
+.|+|.|||||||+|++|.=+..|. +|.|.+||+.+.-. . .|.+.++|+|+-.++..+||.
T Consensus 35 isIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvL 111 (256)
T COG4598 35 ISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVL 111 (256)
T ss_pred EEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHH
Confidence 6899999999999999999988887 99999999876211 1 123579999999999999999
Q ss_pred HHHHHHHhccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccc
Q 000867 66 ETLAFSARCQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGI 145 (1247)
Q Consensus 66 e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 145 (1247)
||+.-+... +.. ..+.++.+..+.+|..+|+.+..| .++..|
T Consensus 112 eNViEaPvh---------VLg------------------------~~k~ea~e~Ae~~L~kVGi~ek~~-----~YP~~L 153 (256)
T COG4598 112 ENVIEAPVH---------VLG------------------------VSKAEAIERAEKYLAKVGIAEKAD-----AYPAHL 153 (256)
T ss_pred HHHHhcchH---------hhc------------------------CCHHHHHHHHHHHHHHhCchhhhh-----cCcccc
Confidence 999764210 000 112234455678899999987665 456689
Q ss_pred cccccchhHHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEE
Q 000867 146 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIV 225 (1247)
Q Consensus 146 SGGqrqRvsiA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~ 225 (1247)
||||+||++|||||+.+|+++++|||||+|||+-.-++++.+++++.+ ++|.+.++|.+..+-+...+|+.|.+|.|-
T Consensus 154 SGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeE--grTMv~VTHEM~FAR~Vss~v~fLh~G~iE 231 (256)
T COG4598 154 SGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEE--GRTMVVVTHEMGFARDVSSHVIFLHQGKIE 231 (256)
T ss_pred CchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHh--CCeEEEEeeehhHHHhhhhheEEeecceec
Confidence 999999999999999999999999999999999999999999999864 566667899999999999999999999999
Q ss_pred EecCcchHH
Q 000867 226 YQGPRELVL 234 (1247)
Q Consensus 226 ~~G~~~~~~ 234 (1247)
++|+++++.
T Consensus 232 E~G~P~qvf 240 (256)
T COG4598 232 EEGPPEQVF 240 (256)
T ss_pred ccCChHHHh
Confidence 999998874
No 495
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=99.97 E-value=3.9e-30 Score=280.74 Aligned_cols=179 Identities=23% Similarity=0.334 Sum_probs=144.9
Q ss_pred EEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCC--CcCHHHHHHHHh
Q 000867 711 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFTRISGYCEQNDIHSP--FVTVYESLLYSA 788 (1247)
Q Consensus 711 ~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~--~ltv~e~l~~~~ 788 (1247)
+++++||+++|+|+||||||||+++|+|..+. .+|+|.+||.+... .++.++|++|++.+++ .+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPP--AKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 46889999999999999999999999998653 47999999987542 3456899999987643 479999998753
Q ss_pred hccCC-CCCCHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHH
Q 000867 789 WLRLP-PEVDSETQKMFIEEIMELVELNPLRQSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 867 (1247)
Q Consensus 789 ~~~~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~ 867 (1247)
..... ........++++.++++.+++.+..++.+ ..||||||||++|||+|+.+|++++|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 00111223446788999999987777665 3699999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeccCChHHHHhhhc
Q 000867 868 VMRTVRNTVDTGRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 868 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~ 182 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDR 182 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999998777999999999986 46666676
No 496
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=99.97 E-value=8e-30 Score=314.28 Aligned_cols=206 Identities=21% Similarity=0.260 Sum_probs=163.5
Q ss_pred EEEEEeEEEEEecCchhhhccccccccceeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eEEEEEEEcC
Q 000867 677 SLTFDEVTYSVDMPKEMKLQGILEDKLMLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 753 (1247)
Q Consensus 677 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~i~G~sGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 753 (1247)
-++++|++++++.. ...+.+|+|+||++++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQ---------QTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCC---------CCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 47889998877411 01246999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCcc------cc-cceEEEeccCCC--CCCCcCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc---cccc
Q 000867 754 YPKKQE------TF-TRISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETQKMFIEEIMELVELNPL---RQSL 821 (1247)
Q Consensus 754 ~~~~~~------~~-~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~ 821 (1247)
.++... .. ++.+||++|++. +.+.+|++|++.+...... ..+....+++++++++.+||.+. .+..
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHR--GMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 876431 11 246899999974 5677899999876432211 22344455678899999999763 3555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeccCChHHHHhhhc
Q 000867 822 VGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFESFDE 899 (1247)
Q Consensus 822 ~g~~~~~~lSgGqr~r~~ia~~l~~~p~il~lDEptsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~fd~ 899 (1247)
+ ..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+.+..|+
T Consensus 154 ~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dr 226 (529)
T PRK15134 154 P-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADR 226 (529)
T ss_pred C-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCE
Confidence 4 479999999999999999999999999999999999999999999998765 899999999986 34456676
No 497
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3e-30 Score=287.98 Aligned_cols=196 Identities=19% Similarity=0.300 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 111 (252)
T PRK14239 33 ITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLR 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHH
Confidence 479999999999999999999853 4212389999999876421 22467999999988776 799999988643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+... + +..+..++.+++.+++.+...+. -++.+..|||||||||
T Consensus 112 ~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 112 LKGIKD--K-------------------------------QVLDEAVEKSLKGASIWDEVKDR-LHDSALGLSGGQQQRV 157 (252)
T ss_pred HcCCCc--H-------------------------------HHHHHHHHHHHHHcCCchhHHHH-HhcCcccCCHHHHHHH
Confidence 221000 0 00112244567777764321111 1345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998743 3 5677789999999999999999999999999988776
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 235 ~ 235 (252)
T PRK14239 235 F 235 (252)
T ss_pred H
Confidence 4
No 498
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3e-30 Score=288.53 Aligned_cols=197 Identities=20% Similarity=0.301 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCCCC--CceeeEEEECCccCCC-----CcccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLDSK--LKFSGRVTYNGHGMDE-----FVPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~~~--~~~~G~v~~~g~~~~~-----~~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|..+|. ...+|+|.++|+++.. ...++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~ 111 (258)
T PRK14241 32 VTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLK 111 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999998641 0138999999987632 1224679999999888999999999988653
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+. .. .++.++.++++++.+||........ ++.+.+|||||||||
T Consensus 112 ~~~~---~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv 157 (258)
T PRK14241 112 LNGV---RN------------------------------KKDLDELVEKSLRGANLWNEVKDRL-DKPGGGLSGGQQQRL 157 (258)
T ss_pred hcCC---CC------------------------------HHHHHHHHHHHHHHcCCchhhhhHh-hCCcccCCHHHHHHH
Confidence 2110 00 0011123456778888742111111 345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEec------CCcEEEe
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLS------DAQIVYQ 227 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~------~G~v~~~ 227 (1247)
+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|++++|+..++.+.+|++++|+ +|++++.
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 158 CIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 999999999999999999999999999999999998742 3 567778999999999999999996 7999999
Q ss_pred cCcchHH
Q 000867 228 GPRELVL 234 (1247)
Q Consensus 228 G~~~~~~ 234 (1247)
|+++++.
T Consensus 235 ~~~~~~~ 241 (258)
T PRK14241 235 DDTEKIF 241 (258)
T ss_pred CCHHHHH
Confidence 9887764
No 499
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.97 E-value=1.8e-30 Score=291.11 Aligned_cols=195 Identities=28% Similarity=0.398 Sum_probs=154.9
Q ss_pred EEEeCCCCCChHHHHhHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000867 2 TLLLGPPCSGKTTLLLALAGKLDSKLKFSGRVTYNGHGMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVG 78 (1247)
Q Consensus 2 ~~ivG~~GsGKSTLL~~L~G~~~~~~~~~G~v~~~g~~~~~~~~---~~~i~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~ 78 (1247)
.+|+||||||||||.++|.|.-+|. +|.|.++|.+++..+. .+.|||+||+-.+|+. ||.|||.= +.
T Consensus 365 lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIaR---f~--- 434 (580)
T COG4618 365 LGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIAR---FG--- 434 (580)
T ss_pred EEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHHh---cc---
Confidence 5899999999999999999999886 9999999999876544 3789999998776665 99999942 11
Q ss_pred CccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchhHHHHH
Q 000867 79 SRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRVTTGEM 158 (1247)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRvsiA~a 158 (1247)
++.|.+.+.+++... .+.++ ++.|++++||.||+.+ .+||||||||+++|||
T Consensus 435 -------------------~~~d~~kIieAA~lA------gvHel--Il~lP~GYdT~iG~~G-~~LSgGQRQRIaLARA 486 (580)
T COG4618 435 -------------------EEADPEKVIEAARLA------GVHEL--ILRLPQGYDTRIGEGG-ATLSGGQRQRIALARA 486 (580)
T ss_pred -------------------ccCCHHHHHHHHHHc------ChHHH--HHhCcCCccCccCCCC-CCCCchHHHHHHHHHH
Confidence 112223333333221 12222 3569999999999754 5899999999999999
Q ss_pred HhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchHHHHH
Q 000867 159 MVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELVLDFF 237 (1247)
Q Consensus 159 l~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~~~~f 237 (1247)
|+++|.+++||||-|.||...+.-+.+.+.+..+ .++++|+ ++|. +.+...+|+|++|++|++..+|+.++++...
T Consensus 487 lYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvv-iaHR-Ps~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 487 LYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVV-IAHR-PSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred HcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEE-EecC-HHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 9999999999999999999999999999988643 4455444 5553 4688899999999999999999999988654
No 500
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.5e-30 Score=289.41 Aligned_cols=196 Identities=18% Similarity=0.274 Sum_probs=151.3
Q ss_pred CEEEeCCCCCChHHHHhHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000867 1 MTLLLGPPCSGKTTLLLALAGKLD--SKLKFSGRVTYNGHGMDEF-----VPQRTAAYISQHDVHIGEMTVRETLAFSAR 73 (1247)
Q Consensus 1 ~~~ivG~~GsGKSTLL~~L~G~~~--~~~~~~G~v~~~g~~~~~~-----~~~~~i~yv~Q~~~~~~~lTv~e~l~f~~~ 73 (1247)
+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+++. ||+||+.++..
T Consensus 40 ~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 118 (259)
T PRK14274 40 VTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPR 118 (259)
T ss_pred EEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHH
Confidence 479999999999999999999986 3212389999999876421 224579999999888875 99999988643
Q ss_pred ccCCCCccchhhHhhHHHHhcCCCCCCchhHHHHHhhhhhhhhhhhHHHHHHHhCCcccccccccCCccccccccccchh
Q 000867 74 CQGVGSRYDMLTELARREKEAGIKPDPDIDVYMKAAATEGQEANVLTDYYLKVLGLEVCDDTLVGDEMVRGISGGQKKRV 153 (1247)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1247)
..+... .++....++++++.+++.+...... ++.+.+||||||||+
T Consensus 119 ~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l-~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 119 IHGTKN---------------------------------KKKLQEIVEKSLKDVALWDEVKDRL-HTQALSLSGGQQQRL 164 (259)
T ss_pred hcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhhh-hCCcccCCHHHHHHH
Confidence 211000 0001122455677777753211111 345668999999999
Q ss_pred HHHHHHhcCCeEeeeeCCCccccHHHHHHHHHHHHHHHHhcCCEEEEEecCCChhHHhhcccEEEecCCcEEEecCcchH
Q 000867 154 TTGEMMVGPALALFMDEISTGLDSSTTFQIVNSIRQNIHILNGTAVISLLQPAPETYDLFDDIILLSDAQIVYQGPRELV 233 (1247)
Q Consensus 154 siA~al~~~p~illLDEptsgLD~~~~~~i~~~l~~~~~~~~~~~iv~~~~~~~~~~~~~D~v~~l~~G~v~~~G~~~~~ 233 (1247)
+|||+|+.+|++++|||||+|||+.++..+.+.++++.. +.++++++|+.+.+.+.+|++++|++|+++.+|+++++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999998742 35667789999999999999999999999999998876
Q ss_pred H
Q 000867 234 L 234 (1247)
Q Consensus 234 ~ 234 (1247)
.
T Consensus 242 ~ 242 (259)
T PRK14274 242 F 242 (259)
T ss_pred h
Confidence 4
Done!