Your job contains 1 sequence.
>000868
MANYLAQFQSIKSTCDRIVIAVEDVSDLWPTIQSGFEEQLPFKRACLNNKTRNPVFVEKL
PAEFILTTDARLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLITQNDER
EWFIVFVSKAHPNNDQANKMAKKVFAKLEVDFNSKKRERCCKFDIHGPEPNFWEDLESKV
MESIRNTLDRRVQFFEDEIRKLSELRFMPVWNFCNFFILKESLAFMFEMAHLHEDALREY
DELELCYLETVNMNGKHKEFGGVERGDDEAALLNPGNKALTEIVQDDSFREFEFRQYLFA
CQSKLLFKLNRPFEVASRGYPFIISFSKALAQHEDILPFCMREVWVITACLALIDATSSQ
YNDGLAAPDIEKEFYRLLGDLYSLCRIKFMRLAYLIGHGTDIERSPVNSASLSMLPWPKP
PVWPLVPADASAEVLAKEKLILQATPRVKHFGIHRKPLPLEPSVLLREANRRRASLSAGN
MFEIFDGSGPDVSLRMSPSNKVQAVSMSRTNSSPGFESSIDRPMRLAEIFVASEHALRQT
ISNPNLLKSLSSVEEFEQKYLELTKGAANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQA
AKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLDKGLFSTKER
QAFQSEVISLAYGEMKDPVPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVWSGFPDDIT
VDTLSLTLMATYNADEGAKALNTSTATVLKPGRNTITVDLPPQKPGSYVLGALTGHIGRL
RFRSHSFSKVGPADSDDFMSYEKPTRPILKVFNPRPLVDLAAAISSPLLINEAQWVGIIV
QPIDYSLKGAILQIDTGPGLTIEESHFVEMESHIKLSNLENCHNIQKDCSLDINKDFERL
HLHDGRIQLPDWASNLTSILWIPIRAINNSLARGSSSVTPQRQSIVDGMRTIALKLQFGV
CHNQIFERTIAVHFTDPFHVSTRIADKCSDGTLLLQVILHSQVNASLTIYDAWLDLQDGF
VHTRQGDGRPTSGFFPLVISSSSKAGILFSICLGKTTPEAEVEAVRRDSLLNIQYGISGK
RTIGAHPPVTAEATGAEDAREGLIFRSALVLQRPVLDPTLAIGFLALPSDGLRVGQLVSM
KWRVERLKDFEENEASQRNDEVLYEVNANADNWMIAGRKRGYVSLPTKQGSRIVISILCV
PLLAGYVRPPQLGLPGVEEANISCNPPGPHLICVLPPTLSSSFCIAA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000868
(1247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147324 - symbol:CLUB "AT5G54440" species:3702... 4833 0. 1
DICTYBASE|DDB_G0273719 - symbol:trappc10-2 "trafficking p... 285 3.5e-53 4
DICTYBASE|DDB_G0273209 - symbol:trappc10-1 "trafficking p... 285 3.5e-53 4
MGI|MGI:1336209 - symbol:Trappc10 "trafficking protein pa... 283 1.7e-38 4
UNIPROTKB|P48553 - symbol:TRAPPC10 "Trafficking protein p... 269 1.1e-35 5
ASPGD|ASPL0000058427 - symbol:AN1038 species:162425 "Emer... 168 3.2e-24 6
FB|FBgn0038303 - symbol:SIDL "Shal Interactor of Di-Leuci... 206 1.3e-15 5
>TAIR|locus:2147324 [details] [associations]
symbol:CLUB "AT5G54440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000919 "cell plate assembly" evidence=IMP]
EMBL:CP002688 InterPro:IPR021773 InterPro:IPR022233 Pfam:PF11817
Pfam:PF12584 GO:GO:0000919 IPI:IPI01020245 RefSeq:NP_200255.5
UniGene:At.28223 PRIDE:F4K0C4 EnsemblPlants:AT5G54440.1
GeneID:835532 KEGG:ath:AT5G54440 OMA:LAHSEMK Uniprot:F4K0C4
Length = 1259
Score = 4833 (1706.4 bits), Expect = 0., P = 0.
Identities = 927/1257 (73%), Positives = 1060/1257 (84%)
Query: 1 MANYLAQFQSIKSTCDRIVIAVEDVSDLWPTIQSGFEEQLPFKRACLNNKTRNPVFVEKL 60
MANYLAQFQ+IK++CDR+V AVEDV DLWPT++ FEE P KRA L NKTRNPVFVE L
Sbjct: 1 MANYLAQFQTIKNSCDRLVAAVEDVCDLWPTVKGLFEEHQPLKRAFLTNKTRNPVFVENL 60
Query: 61 PAEFILTTDARLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLITQNDER 120
P EFILTTDARLRSRFPQEQ LFWFREPYAT+VLVTCEDLDEFK ILKPRLKLI QNDER
Sbjct: 61 PVEFILTTDARLRSRFPQEQYLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDER 120
Query: 121 EWFIVFVSKAHPNNDQANKMAKKVFAKLEVDFNSKKRERCCKFDIHGPEPNFWEDLESKV 180
EWFIVFVSKAHP+NDQA K KKV+AKLEVDF+SKKRERCCK D+HGPE NFWEDLE K+
Sbjct: 121 EWFIVFVSKAHPSNDQATKNVKKVYAKLEVDFSSKKRERCCKLDVHGPEGNFWEDLELKI 180
Query: 181 MESIRNTLDRRVQFFEDEIRKLSELRFMPVWNFCNFFILKESLAFMFEMAHLHEDALREY 240
E IRNTLDRR QF+EDEIRKLSE RFMP+WNFCNFFILKESLAF+FEMAHLHEDALREY
Sbjct: 181 TECIRNTLDRRAQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALREY 240
Query: 241 DELELCYLETVNMNGKHKEFGGVERGDDEAALLNPGNKALTEIVQDDSFREFEFRQYLFA 300
DELELCYLETVNM GK ++FGG + DD+A LL PG+K LT+IVQDDSFREFEFRQYLFA
Sbjct: 241 DELELCYLETVNMPGKQRDFGGFDGEDDQAVLLKPGSKPLTQIVQDDSFREFEFRQYLFA 300
Query: 301 CQSKLLFKLNRPFEVASRGYPFIISFSKALAQHEDILPFCMREVWVITACLALIDATSSQ 360
CQS+LLFKLNRPFEVASRGY F+ISF+KAL HE +LPFCMREVWVITACLALI+AT+S
Sbjct: 301 CQSRLLFKLNRPFEVASRGYSFVISFAKALTLHESVLPFCMREVWVITACLALIEATASH 360
Query: 361 YNDGLAAPDIEKEFYRLLGDLYSLCRIKFMRLAYLIGHGTDIERSPVNSASLSMXXXXXX 420
++DG+ APDIEKEF+RL GDLYSL R+KFMRL YLIG+GTDIE+SP+NSA LSM
Sbjct: 361 HHDGVVAPDIEKEFFRLQGDLYSLSRVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP 420
Query: 421 XXXXXXXADASAEVLAKEKLILQATPRVKHFGIHRKPLPLEPSVLLREANRRRASLSAGN 480
DAS+EVL KEK ILQAT R KHFGI RK LPLEPSVLLR ANRRRASLS GN
Sbjct: 421 AVWPSLPQDASSEVLEKEKTILQATSRTKHFGIQRKALPLEPSVLLRVANRRRASLSTGN 480
Query: 481 MFEIFDG-------SGPDVSLRMSPSNKVQAVSMSRTNSSPG-FESSIDRPMRLAEIFVA 532
+ E+FDG SG + S R S KVQA MSRTNSSPG FES +DRPMRLAEIFVA
Sbjct: 481 IPEMFDGRPSFTEGSGLEASPRTPSSLKVQAPPMSRTNSSPGNFESPLDRPMRLAEIFVA 540
Query: 533 SEHALRQTISNPNLLKSLSSVEEFEQKYLELTKGAANNYHCSWWKRHGVVLDGEIAAVCF 592
+EHALR TIS+ +LLK+LSS+++FE KYL LTKGAA NYH SWWKRHGVVLDGEIAAVCF
Sbjct: 541 AEHALRLTISDHDLLKTLSSIQDFENKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF 600
Query: 593 KHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLDK 652
KHG YD AA SYEKVCALY+GEGWQDLLAEVLPNLA+CQKIL+D+AGY+ SCVRLLSLDK
Sbjct: 601 KHGKYDLAANSYEKVCALYAGEGWQDLLAEVLPNLAQCQKILDDQAGYMSSCVRLLSLDK 660
Query: 653 GLFSTKERQAFQSEVISLAYGEMKDPVPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVW 712
GLFS+KERQAFQSEV++LA+ EMK+PVPLDVSSLITFSGN GPPL+LCDGDPG LSVTVW
Sbjct: 661 GLFSSKERQAFQSEVVTLAHSEMKNPVPLDVSSLITFSGNTGPPLQLCDGDPGNLSVTVW 720
Query: 713 SGFPDDITVDTLSLTLMATYNADEGAKALNTSTATVLKPGRNTITVDLPPQKPGSYVLGA 772
SGFPDDIT+D+LSLTL+AT N DEG +AL +S ATVL PGRNTIT LPPQKPGSYVLG
Sbjct: 721 SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLNPGRNTITFALPPQKPGSYVLGV 780
Query: 773 LTGHIGRLRFRSHSFSKVGPADSDDFMSYEKPTRPILKVFNPRPLVDLAAAISSPLLINE 832
+TG IGRLRFRSHSFSK GPADSDDFMSYEKPTRPILKV PR LVDLAAA+SS LLINE
Sbjct: 781 VTGQIGRLRFRSHSFSKGGPADSDDFMSYEKPTRPILKVSKPRALVDLAAAVSSALLINE 840
Query: 833 AQWVGIIVQPIDYSLKGAILQIDTGPGLTIEESHFVEMESHIKL---SNLENCHNIQKDC 889
AQW+GIIV+PI YSLKGAIL IDTGPGL IE+S+ +EME ++ + +D
Sbjct: 841 AQWIGIIVRPIAYSLKGAILHIDTGPGLKIEDSYGIEMERYMDADCDTGASKAEVFVEDS 900
Query: 890 SLDINKDFERLHLHDGRIQLPDWASNLTSILWIPIRAINNSLARGSSSVTPQRQSIVDGM 949
+ +D E L+L DG+I DWASN++SILW+P+RA++ LARGSSSVTP +Q I++GM
Sbjct: 901 PVSSKRDSEVLNLCDGKIVFSDWASNVSSILWVPVRALSEKLARGSSSVTPLKQDILEGM 960
Query: 950 RTIALKLQFGVCHNQIFERTIAVHFTDPFHVSTRIADKCSDGTLLLQVILHSQVNASLTI 1009
RT+ALKL+FGV HNQIFERTIA HFTDPF V+TR+A+KC+DGTL+LQV+LHS V A+L +
Sbjct: 961 RTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIV 1020
Query: 1010 YDAWLDLQDGFVHTRQGDGRPTSGFFPLVISSSSKAGILFSICLGKTTPEAEVEAVRRDS 1069
D WLDLQDGF+H Q DGRPTS FFPLV+S S+A ++FSICL K+ + +S
Sbjct: 1021 LDVWLDLQDGFIHG-QNDGRPTSTFFPLVVSPGSRAAVVFSICLDKSMSSEGKDLQLPES 1079
Query: 1070 LLNIQYGISGKRTIGAHPPVTAEATGAEDAREGLIFRSALVLQRPVLDPTLAIGFLALPS 1129
+LNI+YGI G R GAH PV A+ + + L+F+SA+VLQRPVLDP L +GFL LPS
Sbjct: 1080 ILNIKYGIHGDRAAGAHRPVDADHSETDTEGRDLVFKSAIVLQRPVLDPCLTVGFLPLPS 1139
Query: 1130 DGLRVGQLVSMKWRVERLKDFEENEA-SQRNDEVLYEVNANADNWMIAGRKRGYVSLPTK 1188
DGLRVG+L++M+WRVERLK+ +E+EA Q++DEVLYEVNAN++NWMIAGRKRG+VSL +
Sbjct: 1140 DGLRVGKLITMQWRVERLKELKESEAVEQQHDEVLYEVNANSENWMIAGRKRGHVSLSEE 1199
Query: 1189 QGSRIVISILCVPLLAGYVRPPQLGLPGVEEANISCNPPGPHLICVLPPTLSSSFCI 1245
QGSR+VISILCVPL+AGYVRPPQLGLP VEEAN+S NP GPHL+CVLPP LSSS+C+
Sbjct: 1200 QGSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPSGPHLVCVLPPLLSSSYCL 1256
>DICTYBASE|DDB_G0273719 [details] [associations]
symbol:trappc10-2 "trafficking protein particle
complex subunit 10" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0273719 dictyBase:DDB_G0273209 GO:GO:0005794
GO:GO:0016192 GenomeReviews:CM000151_GR EMBL:AAFI02000011
EMBL:AAFI02000009 RefSeq:XP_644476.1 RefSeq:XP_644774.1
PRIDE:Q556Z3 EnsemblProtists:DDB0231693 EnsemblProtists:DDB0302652
GeneID:8618876 GeneID:8619100 KEGG:ddi:DDB_G0273209
KEGG:ddi:DDB_G0273719 eggNOG:NOG267071 OMA:ITLESFA
ProtClustDB:CLSZ2431149 InterPro:IPR021773 InterPro:IPR022233
Pfam:PF11817 Pfam:PF12584 Uniprot:Q556Z3
Length = 1442
Score = 285 (105.4 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 62/197 (31%), Positives = 108/197 (54%)
Query: 169 EPNFWEDLESKVMESIRNTLDRRVQFFEDEIRKLSELRFMPVWNFCNFFILKESLAFMFE 228
+ + W+D K+ E I ++ ++ + +EDEIRK+ R P W++ NFF +KE LA ++E
Sbjct: 279 QDDLWDDFLIKMKEGIISSAEQYLTTYEDEIRKMDAKRTTPGWSYQNFFFIKEGLALIYE 338
Query: 229 MAHLHEDALREYDELELCYLETVNMNGKHKEFGGVERGDD---EAALLNPGNKALTEIVQ 285
A L+EDAL +Y ELE+ + + N + + V + + +L+ K +++
Sbjct: 339 RAQLYEDALMQYFELEVLFGDPNNRSQFDQITDEVLQPNSIHCNGNILDTSFKNYRKLIY 398
Query: 286 DDSFREFEFRQYLFACQSKLLFKLNRPFEVASRGYPFIISFSKALAQHEDILPFCMREVW 345
++ F+F+ YLFA QSKLLF L +P E A++ FI S S + Q+ + +E W
Sbjct: 399 ENKISLFDFKVYLFARQSKLLFLLQKPIEAATKSISFITSMSMIIKQYPNSFAPMFKESW 458
Query: 346 VITACLALIDATSSQYN 362
+ + + LI A ++
Sbjct: 459 IFSTSMELIKACQDSFD 475
Score = 231 (86.4 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 49/151 (32%), Positives = 86/151 (56%)
Query: 16 DRIVIAVEDVSDLWPTIQSGFEEQLPFKRACLNNKTRNPVFVEKLPAEFILTTDARLRSR 75
+ I I+ +D S +W I++ LP K KT + VEK+P E + D R+++
Sbjct: 96 EHITISYQDESSIWKYIEAELPNHLPLKNISWKTKTGHTKVVEKMPIEILQYNDERVKAH 155
Query: 76 FPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKL-ITQNDER--EWFIVFVSKAHP 132
+ + L +++PY + LV C+D D +K +++ ++K +TQ ER EW IV+VS
Sbjct: 156 YDNQNL---YKKPYLYLYLVHCDDPDTYKNVVRAKIKQWVTQMTERQQEWLIVYVSLGPK 212
Query: 133 N-NDQANKMAKKVFAKLEVDFNSKKRERCCK 162
++ +K+ + VF +++ DFN K R+RCC+
Sbjct: 213 RFSELTSKLTRTVFDRIKNDFNVK-RDRCCQ 242
Score = 139 (54.0 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 77/322 (23%), Positives = 130/322 (40%)
Query: 549 SLSSVEEFEQKYLELTKGAANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQAAKSYEKVC 608
SL S ++F Q Y EL Y S R L IA + FK + A ++ +
Sbjct: 694 SLQSSKQFTQLYFELLGQIEKLYIQSNRMRSISRLTFAIANLNFKLKEFQIAENLFKSIS 753
Query: 609 ALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLDKGLFSTK-ERQAFQSEV 667
LYS E W + V L+ CQK L Y+ +CV LL+ GL + + E+ + SE+
Sbjct: 754 NLYSREHWSYIEYAVKTRLSYCQKQLGHLVDYVTTCVGLLA--PGLLTNRFEKDHYLSEI 811
Query: 668 ISLAYG-EMK--DP-VPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVWSGFPDDITVDT 723
I ++ E+ P +PL +TF E ++V + S I +
Sbjct: 812 IQISRKPELNIVQPMIPL-FKCKVTFKETVYRYFETIK-----INVRIKSNLISPIRFNN 865
Query: 724 LSLTLMATYNADEGAKALNTSTATVLKPGRNTITVDLPPQKPGSYVLGALTGHIGRLRFR 783
+++ + + D+ LN +++PG N ++V ++ I L F
Sbjct: 866 GAVSFVKSGFGDKLVFQLNDF---LVEPGVNNFQFTAVGTTKATFVKDSIWLKIDNLSF- 921
Query: 784 SHSFSKVGPADSDDFMSYEKPTRPI---LKVFNPRPLVDLAAAISSPLLINEAQWVGIIV 840
+S A T + +KV + + L + +SPLL Q+VGI +
Sbjct: 922 GYSLRNADTAIGGGGGGTNTTTTTLPGEIKVIDSESQITLESFANSPLLFYSIQYVGIKL 981
Query: 841 QPIDYSLKGAILQIDTGPGLTI 862
+++ +L + G TI
Sbjct: 982 HTHSDTIEAGVLTFTSPTGATI 1003
Score = 99 (39.9 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 1136 QLVSMKWRVERLKDFEE---NEASQRNDEVLYEVNANADNWMIAGRKRGYVSLPTKQ-GS 1191
++ ++K + ++ K+ NE Q+ ++ Y + A++ WMI+G+ + S + G
Sbjct: 1308 EITNLKQQQQQQKESNNDNGNEKQQKQQQLQYHIVADSQIWMISGKSKHTFSFNSDTVGE 1367
Query: 1192 RIVISILCVPLLAGYVRPPQLGLPGVEEANISCNPPGPHLICVLP-PTLSS 1241
++ S +P+ +G + P++ L G+ +NIS I V P P + S
Sbjct: 1368 KLKFSCGLIPISSGSLPIPKVTLVGINNSNISYPKTKNEKIFVYPSPQIYS 1418
Score = 61 (26.5 bits), Expect = 4.2e-45, Sum P(4) = 4.2e-45
Identities = 28/135 (20%), Positives = 53/135 (39%)
Query: 809 LKVFNPRPLVDLAAAISSPLLINEAQWVGIIVQPIDYSLKGAILQIDTGPGLTIEESHFV 868
+KV + + L + +SPLL Q+VGI + +++ +L + G TI
Sbjct: 950 IKVIDSESQITLESFANSPLLFYSIQYVGIKLHTHSDTIEAGVLTFTSPTGATI------ 1003
Query: 869 EMESHIKLSNLENCHNIQKDCSLDINKDFERLHLHDGRIQLPDWASNLTSILWIPIRAIN 928
I S++ + K C ++L + ++ L N T ++P+ A+N
Sbjct: 1004 -----IPTSSVIIIQSDDKTCETSSRT----INLINDKLPLSQIGYNQTLEFYLPLMAVN 1054
Query: 929 NSLARGSSSVTPQRQ 943
+ Q Q
Sbjct: 1055 TDTCTHQIRIELQHQ 1069
Score = 42 (19.8 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 1128 PSDGLRVGQLVSMKWRVERLKDFEENEASQRNDEVLYEVNANADN 1172
P+ L GQLVS+ + +++ ++ E +S N+N +N
Sbjct: 1184 PNLNLYPGQLVSLIFEIKKYEN-ESLSSSTSPSSATDSSNSNGNN 1227
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 487 GSGPDVSLRMSPSNKVQAVSMSRTNSSPGFESSIDRPMRLAEIFVASEHALRQTISNPNL 546
G G +V+ S+ ++S S ++SS + S + + ++ +L+ + S+ +L
Sbjct: 28 GGGGNVTSPTLSSSSASSISNSNSSSSNNLKPSTQPLSSSSTLNTPTQFSLQHSSSSSSL 87
Score = 37 (18.1 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 865 SHFVEMESHIKLSNLENCHNIQKDCSLDINKD--FE-RLHLHDGRIQLPDWASNLTSILW 921
S F ++ + N +C+ D S + +E ++ L D ++ L S L +L
Sbjct: 364 SQFDQITDEVLQPNSIHCNGNILDTSFKNYRKLIYENKISLFDFKVYLFARQSKLLFLLQ 423
Query: 922 IPIRAINNSLA 932
PI A S++
Sbjct: 424 KPIEAATKSIS 434
>DICTYBASE|DDB_G0273209 [details] [associations]
symbol:trappc10-1 "trafficking protein particle
complex subunit 10" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0273719 dictyBase:DDB_G0273209 GO:GO:0005794
GO:GO:0016192 GenomeReviews:CM000151_GR EMBL:AAFI02000011
EMBL:AAFI02000009 RefSeq:XP_644476.1 RefSeq:XP_644774.1
PRIDE:Q556Z3 EnsemblProtists:DDB0231693 EnsemblProtists:DDB0302652
GeneID:8618876 GeneID:8619100 KEGG:ddi:DDB_G0273209
KEGG:ddi:DDB_G0273719 eggNOG:NOG267071 OMA:ITLESFA
ProtClustDB:CLSZ2431149 InterPro:IPR021773 InterPro:IPR022233
Pfam:PF11817 Pfam:PF12584 Uniprot:Q556Z3
Length = 1442
Score = 285 (105.4 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 62/197 (31%), Positives = 108/197 (54%)
Query: 169 EPNFWEDLESKVMESIRNTLDRRVQFFEDEIRKLSELRFMPVWNFCNFFILKESLAFMFE 228
+ + W+D K+ E I ++ ++ + +EDEIRK+ R P W++ NFF +KE LA ++E
Sbjct: 279 QDDLWDDFLIKMKEGIISSAEQYLTTYEDEIRKMDAKRTTPGWSYQNFFFIKEGLALIYE 338
Query: 229 MAHLHEDALREYDELELCYLETVNMNGKHKEFGGVERGDD---EAALLNPGNKALTEIVQ 285
A L+EDAL +Y ELE+ + + N + + V + + +L+ K +++
Sbjct: 339 RAQLYEDALMQYFELEVLFGDPNNRSQFDQITDEVLQPNSIHCNGNILDTSFKNYRKLIY 398
Query: 286 DDSFREFEFRQYLFACQSKLLFKLNRPFEVASRGYPFIISFSKALAQHEDILPFCMREVW 345
++ F+F+ YLFA QSKLLF L +P E A++ FI S S + Q+ + +E W
Sbjct: 399 ENKISLFDFKVYLFARQSKLLFLLQKPIEAATKSISFITSMSMIIKQYPNSFAPMFKESW 458
Query: 346 VITACLALIDATSSQYN 362
+ + + LI A ++
Sbjct: 459 IFSTSMELIKACQDSFD 475
Score = 231 (86.4 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 49/151 (32%), Positives = 86/151 (56%)
Query: 16 DRIVIAVEDVSDLWPTIQSGFEEQLPFKRACLNNKTRNPVFVEKLPAEFILTTDARLRSR 75
+ I I+ +D S +W I++ LP K KT + VEK+P E + D R+++
Sbjct: 96 EHITISYQDESSIWKYIEAELPNHLPLKNISWKTKTGHTKVVEKMPIEILQYNDERVKAH 155
Query: 76 FPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKL-ITQNDER--EWFIVFVSKAHP 132
+ + L +++PY + LV C+D D +K +++ ++K +TQ ER EW IV+VS
Sbjct: 156 YDNQNL---YKKPYLYLYLVHCDDPDTYKNVVRAKIKQWVTQMTERQQEWLIVYVSLGPK 212
Query: 133 N-NDQANKMAKKVFAKLEVDFNSKKRERCCK 162
++ +K+ + VF +++ DFN K R+RCC+
Sbjct: 213 RFSELTSKLTRTVFDRIKNDFNVK-RDRCCQ 242
Score = 139 (54.0 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 77/322 (23%), Positives = 130/322 (40%)
Query: 549 SLSSVEEFEQKYLELTKGAANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQAAKSYEKVC 608
SL S ++F Q Y EL Y S R L IA + FK + A ++ +
Sbjct: 694 SLQSSKQFTQLYFELLGQIEKLYIQSNRMRSISRLTFAIANLNFKLKEFQIAENLFKSIS 753
Query: 609 ALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLDKGLFSTK-ERQAFQSEV 667
LYS E W + V L+ CQK L Y+ +CV LL+ GL + + E+ + SE+
Sbjct: 754 NLYSREHWSYIEYAVKTRLSYCQKQLGHLVDYVTTCVGLLA--PGLLTNRFEKDHYLSEI 811
Query: 668 ISLAYG-EMK--DP-VPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVWSGFPDDITVDT 723
I ++ E+ P +PL +TF E ++V + S I +
Sbjct: 812 IQISRKPELNIVQPMIPL-FKCKVTFKETVYRYFETIK-----INVRIKSNLISPIRFNN 865
Query: 724 LSLTLMATYNADEGAKALNTSTATVLKPGRNTITVDLPPQKPGSYVLGALTGHIGRLRFR 783
+++ + + D+ LN +++PG N ++V ++ I L F
Sbjct: 866 GAVSFVKSGFGDKLVFQLNDF---LVEPGVNNFQFTAVGTTKATFVKDSIWLKIDNLSF- 921
Query: 784 SHSFSKVGPADSDDFMSYEKPTRPI---LKVFNPRPLVDLAAAISSPLLINEAQWVGIIV 840
+S A T + +KV + + L + +SPLL Q+VGI +
Sbjct: 922 GYSLRNADTAIGGGGGGTNTTTTTLPGEIKVIDSESQITLESFANSPLLFYSIQYVGIKL 981
Query: 841 QPIDYSLKGAILQIDTGPGLTI 862
+++ +L + G TI
Sbjct: 982 HTHSDTIEAGVLTFTSPTGATI 1003
Score = 99 (39.9 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 1136 QLVSMKWRVERLKDFEE---NEASQRNDEVLYEVNANADNWMIAGRKRGYVSLPTKQ-GS 1191
++ ++K + ++ K+ NE Q+ ++ Y + A++ WMI+G+ + S + G
Sbjct: 1308 EITNLKQQQQQQKESNNDNGNEKQQKQQQLQYHIVADSQIWMISGKSKHTFSFNSDTVGE 1367
Query: 1192 RIVISILCVPLLAGYVRPPQLGLPGVEEANISCNPPGPHLICVLP-PTLSS 1241
++ S +P+ +G + P++ L G+ +NIS I V P P + S
Sbjct: 1368 KLKFSCGLIPISSGSLPIPKVTLVGINNSNISYPKTKNEKIFVYPSPQIYS 1418
Score = 61 (26.5 bits), Expect = 4.2e-45, Sum P(4) = 4.2e-45
Identities = 28/135 (20%), Positives = 53/135 (39%)
Query: 809 LKVFNPRPLVDLAAAISSPLLINEAQWVGIIVQPIDYSLKGAILQIDTGPGLTIEESHFV 868
+KV + + L + +SPLL Q+VGI + +++ +L + G TI
Sbjct: 950 IKVIDSESQITLESFANSPLLFYSIQYVGIKLHTHSDTIEAGVLTFTSPTGATI------ 1003
Query: 869 EMESHIKLSNLENCHNIQKDCSLDINKDFERLHLHDGRIQLPDWASNLTSILWIPIRAIN 928
I S++ + K C ++L + ++ L N T ++P+ A+N
Sbjct: 1004 -----IPTSSVIIIQSDDKTCETSSRT----INLINDKLPLSQIGYNQTLEFYLPLMAVN 1054
Query: 929 NSLARGSSSVTPQRQ 943
+ Q Q
Sbjct: 1055 TDTCTHQIRIELQHQ 1069
Score = 42 (19.8 bits), Expect = 2.8e-47, Sum P(4) = 2.8e-47
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 1128 PSDGLRVGQLVSMKWRVERLKDFEENEASQRNDEVLYEVNANADN 1172
P+ L GQLVS+ + +++ ++ E +S N+N +N
Sbjct: 1184 PNLNLYPGQLVSLIFEIKKYEN-ESLSSSTSPSSATDSSNSNGNN 1227
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 487 GSGPDVSLRMSPSNKVQAVSMSRTNSSPGFESSIDRPMRLAEIFVASEHALRQTISNPNL 546
G G +V+ S+ ++S S ++SS + S + + ++ +L+ + S+ +L
Sbjct: 28 GGGGNVTSPTLSSSSASSISNSNSSSSNNLKPSTQPLSSSSTLNTPTQFSLQHSSSSSSL 87
Score = 37 (18.1 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 865 SHFVEMESHIKLSNLENCHNIQKDCSLDINKD--FE-RLHLHDGRIQLPDWASNLTSILW 921
S F ++ + N +C+ D S + +E ++ L D ++ L S L +L
Sbjct: 364 SQFDQITDEVLQPNSIHCNGNILDTSFKNYRKLIYENKISLFDFKVYLFARQSKLLFLLQ 423
Query: 922 IPIRAINNSLA 932
PI A S++
Sbjct: 424 KPIEAATKSIS 434
>MGI|MGI:1336209 [details] [associations]
symbol:Trappc10 "trafficking protein particle complex 10"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
MGI:MGI:1336209 GO:GO:0005794 GO:GO:0016192 eggNOG:NOG267071
InterPro:IPR022233 Pfam:PF12584 HOGENOM:HOG000046007
HOVERGEN:HBG108593 OrthoDB:EOG4Q58NK EMBL:AK166500 EMBL:BC044902
IPI:IPI00408734 UniGene:Mm.27539 ProteinModelPortal:Q3TLI0
IntAct:Q3TLI0 STRING:Q3TLI0 PaxDb:Q3TLI0 PRIDE:Q3TLI0
UCSC:uc007fxm.1 InParanoid:Q3TLI0 Genevestigator:Q3TLI0
Uniprot:Q3TLI0
Length = 1259
Score = 283 (104.7 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 108/414 (26%), Positives = 182/414 (43%)
Query: 18 IVIAVEDVSDLWPTIQSGFEEQLPFK-RACLNNKTRNPVFVEKLPAEFILTTDARLRSRF 76
IV D +L+ +I +QLP + + R P + L + F+ + L
Sbjct: 20 IVTCAGD-QNLFTSIYPTLSQQLPREPMEWRRSYGRAPKMIH-LESNFVQFKEELLPKEG 77
Query: 77 PQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRL----KLITQNDEREWFIVFVSKAHP 132
+ L F P+ + C D + +K +K L ++ + +W IV V
Sbjct: 78 NKALLTF----PFLHIYWTECCDTEVYKATVKDDLTKWQNVLKAHSSVDWLIVVVENDAK 133
Query: 133 NNDQANKMAK-KVFAKLEVDFNSKKRERCCKF-----DIHGPEPNFWEDLESKVMESIRN 186
++ N + + + K+ DF +K+ +RC D + + W +K+ +
Sbjct: 134 KKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQES-WNAFLTKLRTLLLM 192
Query: 187 TLDRRVQFFEDEIRKLSELRFMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELC 246
+ + + FED++R L E R P W+FC +F+++E LAF+FEM EDAL +YDEL+
Sbjct: 193 SFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDAL 252
Query: 247 YLE-TVNM---NGKH--KEFGGVERGDDEAALLNPGNKALTEIVQDDSFREFEFRQYLFA 300
+ + VN +G + F + + L P + E++Q + R YLF+
Sbjct: 253 FSQYVVNFGAGDGANWLTFFCQPVKSWNGLVLRKPIDMEKRELIQKQEATLLDLRSYLFS 312
Query: 301 CQSKLLFKLNRPFEVASRGYPFIISFSKALAQHEDILPFCMREVWVITACLALIDATSSQ 360
Q LL L RP+EVA R + S + L E +P + WV +CL ++ Q
Sbjct: 313 RQCTLLLFLQRPWEVAQRALELLHSCVQELKLLEVSVPPGALDCWVFLSCLEVL-----Q 367
Query: 361 YNDGLA-APDIEKEFYRLLGDLYSLCRIKFMRLAYLIGHGTDIERSPVNSASLS 413
+G I+ ++G L+S K L YL G + E+ P NS L+
Sbjct: 368 RIEGCCDRAQIDSNIAHMVG-LWSYAMEKLKSLGYLCGLVS--EKGP-NSEDLN 417
Score = 147 (56.8 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 63/227 (27%), Positives = 98/227 (43%)
Query: 510 TNSSPGFESSIDRPMRLAEIFVASEHALRQTISNP--NLLKSLSSVEEFEQKYLELTKGA 567
+ P E ++R + L A T +P L ++LSSVE FE+ YL+L+
Sbjct: 407 SEKGPNSED-LNRTVDLLAGLGAERPETANTAQSPYKKLQEALSSVEAFEKHYLDLSHAT 465
Query: 568 ANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQAAKSY-EKVCALYSGEGWQDLLAEVLPN 626
Y S + L G+ A + Q A+ Y + Y EGW +
Sbjct: 466 IEMY-TSIGRIRSAKLVGKDLAEFYMRKRSPQKAEMYLQGALKNYLAEGWALPVTHTRKQ 524
Query: 627 LAECQKILNDEAGYLLSCVRLLSLDKGLFSTKERQAFQSEVISLAYGEMKDP---VPLDV 683
LAECQK L YL + LL+ D L + +ER+ F E++S A + +P V L +
Sbjct: 525 LAECQKHLGQMENYLQTS-SLLASDHHL-TEEERKYFCQEILSFASQQEDNPGHKVVLPM 582
Query: 684 SSLITFSG-NPGPPLELCD-GDPGTLSVTVWSGFPDDITVDTLSLTL 728
S + PP + G T+ +TV S P + VD +++ +
Sbjct: 583 HSFARLKDLHFDPPNAVVHAGGVLTVEITVCSQMPIPVHVDQIAVNV 629
Score = 104 (41.7 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 1127 LPSDGL---RVGQLVSMKWRVERLKDF---EENEASQRNDE-----VLYEVNANADNWMI 1175
LP+ G + G L S++ + RL D +++EA +++ ++YEV N+ NW +
Sbjct: 1066 LPASGAEYCKTGSLCSLEVSITRLADLLDVDKDEALVESEDYFSTKLMYEVVDNSSNWAV 1125
Query: 1176 AGRKRGYVSLPTKQGSRIVISILCVPLLAGYVRPPQLGL 1214
G+ G +++P + + + +PL AGY+ P + L
Sbjct: 1126 CGKSCGVIAMPLAAQATHRVHMEVMPLFAGYLPLPDVRL 1164
Score = 75 (31.5 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 735 DEGAKALNTSTATVLKPGRNTITVDLPPQKPGSYVLGALTGHIGRLRF 782
++GA L S+ T L+PG N I ++PG+Y L L +G + F
Sbjct: 721 EDGAHVLRCSSVT-LQPGANKIAFKTQAKEPGTYTLRQLRASVGPVWF 767
Score = 44 (20.5 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 397 GHGTDIERSPVNSAS 411
GH TD+ +P+N+ S
Sbjct: 983 GHATDLRLAPLNTQS 997
>UNIPROTKB|P48553 [details] [associations]
symbol:TRAPPC10 "Trafficking protein particle complex
subunit 10" species:9606 "Homo sapiens" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006814 "sodium ion transport"
evidence=TAS] [GO:0015081 "sodium ion transmembrane transporter
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0035725 "sodium ion transmembrane transport" evidence=TAS]
GO:GO:0016021 GO:GO:0005794 GO:GO:0016192 GO:GO:0015081
EMBL:AB001523 eggNOG:NOG267071 InterPro:IPR022233 Pfam:PF12584
OMA:TAQSPYK EMBL:U19252 EMBL:U61500 EMBL:U61520 EMBL:U61501
EMBL:U61502 EMBL:U61503 EMBL:U61504 EMBL:U61505 EMBL:U61506
EMBL:U61507 EMBL:U61508 EMBL:U61509 EMBL:U61510 EMBL:U61511
EMBL:U61512 EMBL:U61513 EMBL:U61514 EMBL:U61515 EMBL:U61516
EMBL:U61517 EMBL:U61518 EMBL:U61519 EMBL:BC101728 IPI:IPI00298870
PIR:JC5523 RefSeq:NP_003265.3 UniGene:Hs.126221
ProteinModelPortal:P48553 DIP:DIP-48281N IntAct:P48553
STRING:P48553 PhosphoSite:P48553 DMDM:12644285 PaxDb:P48553
PRIDE:P48553 DNASU:7109 Ensembl:ENST00000291574 GeneID:7109
KEGG:hsa:7109 UCSC:uc002zea.3 CTD:7109 GeneCards:GC21P045432
HGNC:HGNC:11868 MIM:602103 neXtProt:NX_P48553 PharmGKB:PA162406870
HOGENOM:HOG000046007 HOVERGEN:HBG108593 InParanoid:P48553
OrthoDB:EOG4Q58NK PhylomeDB:P48553 ChiTaRS:TRAPPC10 GenomeRNAi:7109
NextBio:27825 ArrayExpress:P48553 Bgee:P48553 CleanEx:HS_TRAPPC10
Genevestigator:P48553 GermOnline:ENSG00000160218 Uniprot:P48553
Length = 1259
Score = 269 (99.8 bits), Expect = 1.1e-35, Sum P(5) = 1.1e-35
Identities = 106/414 (25%), Positives = 180/414 (43%)
Query: 18 IVIAVEDVSDLWPTIQSGFEEQLPFK-RACLNNKTRNPVFVEKLPAEFILTTDARLRSRF 76
IV D +L+ ++ +QLP + + R P + L + F+ + L
Sbjct: 20 IVTCAGD-QNLFTSVYPTLSQQLPREPMEWRRSYGRAPKMIH-LESNFVQFKEELLPKEG 77
Query: 77 PQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRL----KLITQNDEREWFIVFVSKAHP 132
+ L F P+ + C D + +K +K L ++ + +W IV V
Sbjct: 78 NKALLTF----PFLHIYWTECCDTEVYKATVKDDLTKWQNVLKAHSSVDWLIVIVENDAK 133
Query: 133 NNDQANKMAK-KVFAKLEVDFNSKKRERCCKF-----DIHGPEPNFWEDLESKVMESIRN 186
++ N + + + K+ DF +K+ +RC D + + W +K+ +
Sbjct: 134 KKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQES-WNAFLTKLRTLLLM 192
Query: 187 TLDRRVQFFEDEIRKLSELRFMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELC 246
+ + + FED++R L E R P W+FC +F+++E LAF+FEM EDAL +YDEL+
Sbjct: 193 SFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDAL 252
Query: 247 YLE-TVNM---NGKH--KEFGGVERGDDEAALLNPGNKALTEIVQDDSFREFEFRQYLFA 300
+ + VN +G + F + + L P + E +Q + R YLF+
Sbjct: 253 FSQYVVNFGAGDGANWLTFFCQPVKSWNGLILRKPIDMEKRESIQRREATLLDLRSYLFS 312
Query: 301 CQSKLLFKLNRPFEVASRGYPFIISFSKALAQHEDILPFCMREVWVITACLALIDATSSQ 360
Q LL L RP+EVA R + + + L E +P + WV +CL ++ Q
Sbjct: 313 RQCTLLLFLQRPWEVAQRALELLHNCVQELKLLEVSVPPGALDCWVFLSCLEVL-----Q 367
Query: 361 YNDGLA-APDIEKEFYRLLGDLYSLCRIKFMRLAYLIGHGTDIERSPVNSASLS 413
+G I+ +G L+S K L YL G + E+ P NS L+
Sbjct: 368 RIEGCCDRAQIDSNIAHTVG-LWSYATEKLKSLGYLCGLVS--EKGP-NSEDLN 417
Score = 120 (47.3 bits), Expect = 1.1e-35, Sum P(5) = 1.1e-35
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 510 TNSSPGFESSIDRPMRLAEIFVASEHALRQTISNP--NLLKSLSSVEEFEQKYLELTKGA 567
+ P E ++R + L A T +P L ++LSSVE FE+ YL+L+
Sbjct: 407 SEKGPNSED-LNRTVDLLAGLGAERPETANTAQSPYKKLKEALSSVEAFEKHYLDLSHAT 465
Query: 568 ANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQAAKSY-EKVCALYSGEGWQDLLAEVLPN 626
Y S + G+ A + Q A+ Y + Y EGW +
Sbjct: 466 IEMY-TSIGRIRSAKFVGKDLAEFYMRKKAPQKAEIYLQGALKNYLAEGWALPITHTRKQ 524
Query: 627 LAECQKILNDEAGYLLSCVRLLSLDKGLFSTKERQAFQSEVISLA 671
LAECQK L YL + LL+ D L + +ER+ F E++ A
Sbjct: 525 LAECQKHLGQIENYLQTS-SLLASDHHL-TEEERKHFCQEILDFA 567
Score = 116 (45.9 bits), Expect = 1.1e-35, Sum P(5) = 1.1e-35
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 1128 PSDGL---RVGQLVSMKWRVERLKDF---EENEASQRNDE-----VLYEVNANADNWMIA 1176
P G+ R G L S++ + RL D +++EA +DE ++YEV N+ NW +
Sbjct: 1067 PPSGMEYCRTGSLCSLEVLITRLSDLLEVDKDEALTESDEHFSTKLMYEVVDNSSNWAVC 1126
Query: 1177 GRKRGYVSLPTKQGSRIVISILCVPLLAGYVRPPQLGL 1214
G+ G +S+P + + + +PL AGY+ P + L
Sbjct: 1127 GKSCGVISMPVAARATHRVHMEVMPLFAGYLPLPDVRL 1164
Score = 82 (33.9 bits), Expect = 1.1e-35, Sum P(5) = 1.1e-35
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 725 SLTLMATYNADEGAKALNTSTATVLKPGRNTITVDLPPQKPGSYVLGALTGHIGRLRF 782
SL + + +EGA L S T L+PG N IT ++PG+Y L L +G + F
Sbjct: 711 SLEMPSGVALEEGAHVLRCSHVT-LEPGANQITFRTQAKEPGTYTLRQLCASVGSVWF 767
Score = 48 (22.0 bits), Expect = 3.6e-29, Sum P(4) = 3.6e-29
Identities = 32/138 (23%), Positives = 51/138 (36%)
Query: 785 HSFSKVG--PADSDDFMSYEKPTRPILKVFNPRPLVDLAAAISSPLLINEAQWVGIIVQP 842
H VG PA + KP KV N L ++ A I P + + +
Sbjct: 1024 HCRFSVGFSPASEEQLSISLKPYTYEFKVENFFTLYNVKAEIFPPSGMEYCRTGSLCSLE 1083
Query: 843 IDYSLKGAILQIDTGPGLTIEESHFVEMESHIKLSNLENCHNIQKDC---SLDIN-KDFE 898
+ + +L++D LT + HF + + N N K C S+ + +
Sbjct: 1084 VLITRLSDLLEVDKDEALTESDEHFSTKLMYEVVDNSSNWAVCGKSCGVISMPVAARATH 1143
Query: 899 RLH-----LHDGRIQLPD 911
R+H L G + LPD
Sbjct: 1144 RVHMEVMPLFAGYLPLPD 1161
Score = 40 (19.1 bits), Expect = 1.1e-35, Sum P(5) = 1.1e-35
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 961 CHNQIFERTIAVHFTDPFHVSTRIADKCSDGTL-LLQVILHSQVNASLTIYDAWL 1014
C I+ IA+ F+ PF + + S GT +QV + + + D++L
Sbjct: 928 CPWSIYSTVIALTFSVPFRTTHSLL---SSGTRKYVQVCVQNLSELDFQLSDSYL 979
Score = 38 (18.4 bits), Expect = 4.4e-24, Sum P(3) = 4.4e-24
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 393 AYLI--GHGTDIERSPVNSAS 411
+YL+ G TD++ P+N+ S
Sbjct: 977 SYLVDTGDSTDLQLVPLNTQS 997
Score = 37 (18.1 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 475 SLSAGNMFEIFDGSGPDVSLRMSP--SNKVQAVSMSRTNSSPGFESSIDRPMRLAEIFVA 532
SL A ++E+F+ S D SL + V + + R SS SS++ P +A
Sbjct: 670 SLPALELYEMFERSPSDNSLNTTGIICRNVHML-LRRQESS----SSLEMPSGVA--LEE 722
Query: 533 SEHALR 538
H LR
Sbjct: 723 GAHVLR 728
>ASPGD|ASPL0000058427 [details] [associations]
symbol:AN1038 species:162425 "Emericella nidulans"
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0032258 "CVT pathway" evidence=IEA] [GO:0034498
"early endosome to Golgi transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] EMBL:BN001308 EMBL:AACD01000015
eggNOG:NOG267071 InterPro:IPR022233 Pfam:PF12584 OrthoDB:EOG42FWRV
RefSeq:XP_658642.1 EnsemblFungi:CADANIAT00001607 GeneID:2876815
KEGG:ani:AN1038.2 HOGENOM:HOG000206383 OMA:RRHQIPG Uniprot:Q5BEJ2
Length = 1433
Score = 168 (64.2 bits), Expect = 3.2e-24, Sum P(6) = 3.2e-24
Identities = 48/144 (33%), Positives = 71/144 (49%)
Query: 116 QNDEREWFIVFVSKAHPNNDQA--NKMAKK---VFAKLEVDFNSKKR---ERCCKFDIHG 167
++D EW I+ V + ++ +K + V K++ DFN + +R + +
Sbjct: 138 KHDAFEWLILHVVQDGDGTEKVATSKWGRTTTTVLEKVKADFNGTSKTAIDRVAQLRLPK 197
Query: 168 P-----EPNFWEDLES---KVMESIRNTLDRRVQFFEDEIRKLSELRFMPVWNFCNFFIL 219
P P + +E KV I + D RV +E++I++ R +P WNFC FFIL
Sbjct: 198 PGNTQKSPELADQIEDFVEKVKNGILASFDLRVAQYEEDIKEKDSQRSLPGWNFCTFFIL 257
Query: 220 KESLAFMFEMAHLHEDALREYDEL 243
KE LA FE L EDAL YDEL
Sbjct: 258 KEGLARGFENVGLFEDALVGYDEL 281
Score = 105 (42.0 bits), Expect = 3.2e-24, Sum P(6) = 3.2e-24
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 1127 LPSDG--LRVGQLVSMKWRVERLKDFEENEASQRND---EVLYEVNANADNWMIAGRKRG 1181
LPS VGQ ++ + R+ + + + + D E YE++AN D WM+ GR+RG
Sbjct: 1251 LPSQAPYAAVGQTITAELRLSHTRRWCSPDQRENGDGPLEFSYELHANPDLWMVGGRRRG 1310
Query: 1182 YVSLPTKQGSRIVISILCVPLLAGYVRPPQLGLPGVE 1218
+ +G +I+ +P AG+ L LPG+E
Sbjct: 1311 --NFTASEGETRTFAIMLLPQKAGH-----LLLPGLE 1340
Score = 96 (38.9 bits), Expect = 3.2e-24, Sum P(6) = 3.2e-24
Identities = 56/242 (23%), Positives = 101/242 (41%)
Query: 646 RLLSLD-KGLFSTKERQAFQSEVISLAYGEMKDPVPLDVSSLI-TFSGNPGPPLELCDGD 703
R +LD +FS +E + E + A GE++ V ++ PG L D D
Sbjct: 735 RQKTLDASSIFSEQELLSEYVEELFRAAGELQKEVSAPLTDFFGELDVKPGI-LHYKDRD 793
Query: 704 PGTLSVTVWSGFPDDITVDTLSLTLMATYNADEGAKA-LNTSTATVLKPGRNTITVDLPP 762
L + + I VD++ + L++ + + ++ + TST T +K I VD
Sbjct: 794 GFQLQLHLRFLLGKRIDVDSIKIRLVSANASAQSSECWIETSTKTTIKSSPTKILVDSST 853
Query: 763 QKPGSYVLGALTGHIGRLRFRSHSFSKVG-PADSDDFMSYEKPTRPILKVFNPRPLVDLA 821
G Y + + G L F + P + + ++ TR + + P P L
Sbjct: 854 TLQGKYYVDRVETRTGNLLFSMSGGANANLPLGFREDVDEDEDTRSYILCYPP-P-EGLQ 911
Query: 822 AAISSPLLIN-EA-QWVGIIVQPIDYSLKGAILQI---DTGPGLTIEESHFVEMESHIKL 876
A I +P L+N EA + + + + +K +L++ G L + E+ VE + I
Sbjct: 912 ARIEAPHLVNLEAMRTLELELNSGWNDIKTGVLRVRPATAGLRLRVTEAEVVEGDIDINA 971
Query: 877 SN 878
+N
Sbjct: 972 NN 973
Score = 78 (32.5 bits), Expect = 3.2e-24, Sum P(6) = 3.2e-24
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 546 LLKSLSSVEEFEQKYLELTKG------AANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQ 599
L ++L S + F Y ELT AAN + + H + D +A + F+ +Y
Sbjct: 619 LKEALKSRKAFRAYYEELTDQMYRHHIAANRINST----HTALAD--MAVLRFRQSDYGA 672
Query: 600 AAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKIL--NDEAGYLLSCVRLLSL----DKG 653
AA +V Y + W L +L A C K L NDE Y+ RLL+ +
Sbjct: 673 AASYCHQVAPFYGNKSWTILEGVMLEVYARCLKELGRNDE--YVRMMARLLAKYAAHTQS 730
Query: 654 LFSTKERQAFQSEVIS 669
ST+++ S + S
Sbjct: 731 RLSTRQKTLDASSIFS 746
Score = 63 (27.2 bits), Expect = 3.2e-24, Sum P(6) = 3.2e-24
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 273 LNPGNKALTEIVQDDSFREFEFRQYLFACQSKLLFKLNRPFEVAS 317
L+P K E + + F+FR Y+F+ Q LL + +R + S
Sbjct: 347 LDPNRKPYREEILSSNISIFDFRTYVFSRQLTLLLRASRAPSIVS 391
Score = 56 (24.8 bits), Expect = 3.2e-24, Sum P(6) = 3.2e-24
Identities = 24/112 (21%), Positives = 46/112 (41%)
Query: 12 KSTCDRIVIAVEDVSDLWPTIQSGFEEQLPFKRACLNNKTRNPVFVEKLPAEFI---LTT 68
++ + + + D S L+ ++Q +LP + + TR +E L F T
Sbjct: 6 QAASNSVTVEYTDPSGLFSSVQPIIAHKLPLRNLHWKSPTRPVRSIESLRIGFTPAKTET 65
Query: 69 DARLRSR-FP-------QEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLK 112
D R S P + Q+ + PY + ++ C+D D +K + L+
Sbjct: 66 DERKPSSDAPGGTVTHRRHQIPGLRQTPYLKIYILRCDDNDTYKNSARKALR 117
Score = 53 (23.7 bits), Expect = 5.7e-20, Sum P(6) = 5.7e-20
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 999 LHSQVNASLTIYDAWLDLQDGFVHTRQGDG 1028
L +V+A LT + LD++ G +H + DG
Sbjct: 765 LQKEVSAPLTDFFGELDVKPGILHYKDRDG 794
Score = 46 (21.3 bits), Expect = 9.7e-16, Sum P(5) = 9.7e-16
Identities = 18/91 (19%), Positives = 34/91 (37%)
Query: 473 RASLSAGNMFEIFDGSGPDVSLRMSPSNKVQAVSMSRTNSSPGFESSIDRPMRLAEIFVA 532
+ S+ + +++E+ G +V++R+ P + + R +RL F
Sbjct: 1064 KCSIPSSDVYEVQSNVGDNVAMRVFPKQPASLLYKIQPRKDIVASPGSRRALRLTVDFTC 1123
Query: 533 SEHALRQTISNPNLLKSLSSVEEFEQKYLEL 563
+ T+ K S EF Q Y L
Sbjct: 1124 VDDECFDTVEKT--FKESISKSEFAQ-YTSL 1151
Score = 41 (19.5 bits), Expect = 8.7e-19, Sum P(6) = 8.7e-19
Identities = 19/84 (22%), Positives = 36/84 (42%)
Query: 680 PLDVSSLITFSGNPGPPLELCDGDPGTLSVTVWSGFPDDITVDTLSLTLMATYNADEGAK 739
P +SL+ + P + G L +TV DD DT+ T + + E A+
Sbjct: 1089 PKQPASLL-YKIQPRKDIVASPGSRRALRLTVDFTCVDDECFDTVEKTFKESISKSEFAQ 1147
Query: 740 ALNTSTATVLKPGRNTITVDLPPQ 763
+ T +++ R+ ++ PP+
Sbjct: 1148 YTSLLTPHLVEAFRSQLS---PPE 1168
>FB|FBgn0038303 [details] [associations]
symbol:SIDL "Shal Interactor of Di-Leucine Motif"
species:7227 "Drosophila melanogaster" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014297 GO:GO:0005794 GO:GO:0016192 GO:GO:0030425
GO:GO:0043204 eggNOG:NOG267071 InterPro:IPR021773
InterPro:IPR022233 Pfam:PF11817 Pfam:PF12584 EMBL:AY118591
RefSeq:NP_650431.1 UniGene:Dm.11565 PaxDb:Q9VFB7 PRIDE:Q9VFB7
EnsemblMetazoa:FBtr0083138 GeneID:41833 KEGG:dme:Dmel_CG6623
UCSC:CG6623-RA CTD:41833 FlyBase:FBgn0038303
GeneTree:ENSGT00390000003873 InParanoid:Q9VFB7 OMA:TAQSPYK
OrthoDB:EOG4T76J5 PhylomeDB:Q9VFB7 GenomeRNAi:41833 NextBio:825784
Bgee:Q9VFB7 GermOnline:CG6623 Uniprot:Q9VFB7
Length = 1145
Score = 206 (77.6 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 66/255 (25%), Positives = 114/255 (44%)
Query: 88 PYATVVLVTCEDLDEFKTILKPR----LKLITQNDEREWFIVFVSKAHPNNDQANKMAKK 143
P + + C D+D +K ++ LK +T +W I+ V + N M +
Sbjct: 73 PILHIFVTECNDVDTYKATIREAIDIWLKTLTSYGVSDWMILLVETLDMRKTK-NFMPRT 131
Query: 144 -VFAKLEVDFNSKKRERC------CKFDIHGPEPNFWEDLESKVMESIRNTLDRRVQFFE 196
V K+ +DF +K +RC KF+ E + L ++ + + +R + +E
Sbjct: 132 TVLDKIRLDFGTKNDDRCISVLNPAKFEQKSTES--FRCLVQRIRFLMLTSYNRNIVKYE 189
Query: 197 DEIRKLSELRFMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVN---M 253
+ IR E R + W+F +F ++E LA +FE L +AL +YDEL+ + + + +
Sbjct: 190 ELIRSKREKRNIEGWDFRQYFFMQEDLALIFEKLELPTEALIQYDELDAMFSQFITHTGL 249
Query: 254 NGKHKEFGGVERGDD--EAALLNPGNK-ALTEIVQDDSFREFEFRQYLFACQSKLLFKLN 310
N K + + D L +K + ++D+ EFR YLF Q+ LL N
Sbjct: 250 NEKQQWLNHFRKPLDAFHGICLTRADKFEMRNKIRDEGVSLLEFRNYLFERQAYLLLTCN 309
Query: 311 RPFEVASRGYPFIIS 325
E+A R F+ S
Sbjct: 310 DIPEIAKRLLNFLFS 324
Score = 74 (31.1 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 546 LLKSLSSVEEFEQKYLELTKGAANNY-HCSWWKRHGVV-LD-GEIAAVCFKHGNYDQAAK 602
L ++L S + F++ YLEL + A + Y H + + +V LD G C + + +A
Sbjct: 446 LKEALGSNQAFQKLYLELAELAISTYKHVTRLRSARLVGLDLGNF--YCALNEPH-KAVG 502
Query: 603 SYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSC 644
+ + E W L ++ L LA C + + D Y +C
Sbjct: 503 FFTDLLRELKAENWHMLSSQTLLELANCYRKMGDSLAYTKTC 544
Score = 70 (29.7 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 1161 EVLYEVNANADNWMIAGRKRGYVSLPTKQGSRIVISILCVPLLAGYVRPPQLGL 1214
+++YEV + + W + GR G VS+ I + ++ PL G++ P + L
Sbjct: 1050 DLMYEVLNDQNLWAVCGRSAGVVSMKDVDSHSISLDVM--PLSTGFLPMPSIRL 1101
Score = 41 (19.5 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 436 AKEKLILQATPRVKHFGIHRKP 457
+++ LQATP+++ +RKP
Sbjct: 417 SEQHQFLQATPQLRDRSPNRKP 438
Score = 38 (18.4 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 846 SLKGAILQIDTGPGLTIEESHFVEMESHIKLSNLE 880
SLK + P +IE +++ +E H ++ ++E
Sbjct: 568 SLKTLKTTLSAQP--SIENANYCVLEDHFRILDIE 600
Score = 37 (18.1 bits), Expect = 2.2e-12, Sum P(5) = 2.2e-12
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 1217 VEEANISCNPPGPHLICVLP 1236
++ A + C+ PG L+ + P
Sbjct: 930 LQHAQVKCDVPGVQLLDLNP 949
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1247 1234 0.00078 124 3 11 22 0.38 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 636 (68 KB)
Total size of DFA: 558 KB (2253 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 106.74u 0.17s 106.91t Elapsed: 00:00:08
Total cpu time: 106.75u 0.17s 106.92t Elapsed: 00:00:08
Start: Tue May 21 17:33:53 2013 End: Tue May 21 17:34:01 2013