Your job contains 1 sequence.
>000870
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGDASQMGLDLDEDL
LLDKGTAAGHGVSDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAE
PIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNG
DGHTADWPLHKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGTIN
PLDGSKRFKNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVS
EDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEETA
SVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECY
LTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLL
SVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESF
GVDRTKRNSEFIPDDDDLLSSILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRK
VLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMS
AELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNG
DTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNV
EVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQP
VEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGADVE
TDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNH
MFSEEPVIDSTNSVELGGDTINVSLDDGKSQVDLRSPMDDGRMEIEEVTIGNDTEFLNVN
DDEVAEDYDDGDGCPEDARVLENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVG
KTRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMKADF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000870
(1246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181457 - symbol:SYN4 "sister chromatid cohesi... 959 7.0e-169 2
TAIR|locus:2164501 - symbol:SYN2 species:3702 "Arabidopsi... 297 3.8e-41 3
TAIR|locus:2097548 - symbol:SYN3 "AT3G59550" species:3702... 384 5.2e-41 2
UNIPROTKB|O60216 - symbol:RAD21 "Double-strand-break repa... 376 1.5e-36 3
UNIPROTKB|Q3SWX9 - symbol:RAD21 "Double-strand-break repa... 374 2.6e-36 3
UNIPROTKB|E2QRU9 - symbol:RAD21 "Uncharacterized protein"... 374 2.7e-36 3
UNIPROTKB|F1S1K0 - symbol:LOC100738633 "Uncharacterized p... 374 2.7e-36 3
UNIPROTKB|O93310 - symbol:rad21 "Double-strand-break repa... 370 6.1e-36 3
ZFIN|ZDB-GENE-060503-223 - symbol:rad21b "RAD21 homolog (... 372 8.5e-36 3
UNIPROTKB|F1NYD0 - symbol:RAD21 "Uncharacterized protein"... 367 9.3e-36 4
MGI|MGI:108016 - symbol:Rad21 "RAD21 homolog (S. pombe)" ... 368 1.5e-35 3
RGD|1594529 - symbol:Rad21 "RAD21 homolog (S. pombe)" spe... 368 1.5e-35 3
ZFIN|ZDB-GENE-030131-994 - symbol:rad21a "RAD21 homolog (... 370 1.7e-35 3
FB|FBgn0260987 - symbol:vtd "verthandi" species:7227 "Dro... 356 6.2e-35 3
UNIPROTKB|F1S874 - symbol:RAD21L1 "Uncharacterized protei... 343 6.8e-34 2
UNIPROTKB|D2HSB3 - symbol:RAD21L1 "Double-strand-break re... 347 1.2e-33 4
UNIPROTKB|F1PWJ5 - symbol:RAD21L1 "Uncharacterized protei... 353 2.4e-33 3
MGI|MGI:3652039 - symbol:Rad21l "RAD21-like (S. pombe)" s... 351 5.1e-33 3
RGD|1587557 - symbol:Rad21l1 "RAD21-like 1 (S. pombe)" sp... 356 5.5e-33 3
UNIPROTKB|Q9H4I0 - symbol:RAD21L1 "Double-strand-break re... 350 9.9e-33 3
UNIPROTKB|E1BTV6 - symbol:RAD21L1 "Uncharacterized protei... 362 1.5e-32 3
UNIPROTKB|E5RFV8 - symbol:RAD21 "Double-strand-break repa... 367 2.0e-32 1
UNIPROTKB|E5RIN7 - symbol:RAD21 "Double-strand-break repa... 367 2.0e-32 1
UNIPROTKB|E1C938 - symbol:RAD21L1 "Uncharacterized protei... 362 4.6e-32 4
UNIPROTKB|E1B9J3 - symbol:RAD21L1 "Uncharacterized protei... 346 8.3e-32 4
UNIPROTKB|E1BTU9 - symbol:RAD21L1 "Uncharacterized protei... 357 8.7e-32 3
ZFIN|ZDB-GENE-061103-505 - symbol:rad21l1 "RAD21-like 1 (... 334 7.7e-31 4
WB|WBGene00000591 - symbol:coh-1 species:6239 "Caenorhabd... 312 2.8e-30 3
UNIPROTKB|E5RJK5 - symbol:RAD21 "Double-strand-break repa... 345 4.5e-30 1
WB|WBGene00004737 - symbol:scc-1 species:6239 "Caenorhabd... 301 5.5e-30 5
UNIPROTKB|E5RJW1 - symbol:RAD21 "Double-strand-break repa... 341 1.2e-29 1
ASPGD|ASPL0000069046 - symbol:AN7465 species:162425 "Emer... 288 7.9e-27 3
POMBASE|SPCC338.17c - symbol:rad21 "mitotic cohesin compl... 286 1.4e-24 3
UNIPROTKB|G4MR40 - symbol:MGG_09891 "Double-strand-break ... 275 4.0e-23 2
TAIR|locus:2169667 - symbol:SYN1 "SYNAPTIC 1" species:370... 231 8.1e-20 3
DICTYBASE|DDB_G0276977 - symbol:rad21 "cohesin subunit" s... 242 2.0e-17 5
POMBASE|SPBC29A10.14 - symbol:rec8 "meiotic cohesin compl... 174 4.0e-11 2
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 165 8.4e-08 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 165 8.4e-08 1
CGD|CAL0000863 - symbol:MCD1 species:5476 "Candida albica... 131 1.8e-07 5
SGD|S000002161 - symbol:MCD1 "Essential alpha-kleisin sub... 114 3.5e-07 3
ASPGD|ASPL0000077407 - symbol:AN11113 species:162425 "Eme... 140 8.2e-06 2
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 146 1.0e-05 1
SGD|S000001912 - symbol:YFR016C "Putative protein of unkn... 140 3.4e-05 1
MGI|MGI:1929645 - symbol:Rec8 "REC8 homolog (yeast)" spec... 100 3.7e-05 3
UNIPROTKB|H0YLK4 - symbol:REC8 "Meiotic recombination pro... 106 6.6e-05 2
UNIPROTKB|O95072 - symbol:REC8 "Meiotic recombination pro... 106 6.6e-05 2
UNIPROTKB|F1PHT7 - symbol:DMP1 "Uncharacterized protein" ... 122 9.4e-05 2
UNIPROTKB|E1BL69 - symbol:REC8 "Uncharacterized protein" ... 108 0.00018 4
UNIPROTKB|Q9NZW4 - symbol:DSPP "Dentin sialophosphoprotei... 133 0.00018 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 97 0.00020 2
FB|FBgn0003137 - symbol:Ppn "Papilin" species:7227 "Droso... 133 0.00050 1
UNIPROTKB|Q939N5 - symbol:gspB "Platelet binding protein ... 133 0.00053 1
CGD|CAL0004905 - symbol:IFF6 species:5476 "Candida albica... 104 0.00069 2
UNIPROTKB|Q59XL0 - symbol:IFF6 "Putative uncharacterized ... 104 0.00069 2
UNIPROTKB|G5EHS1 - symbol:MGCH7_ch7g423 "Uncharacterized ... 131 0.00098 3
>TAIR|locus:2181457 [details] [associations]
symbol:SYN4 "sister chromatid cohesion 1 protein 4"
species:3702 "Arabidopsis thaliana" [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISM] [GO:0007062
"sister chromatid cohesion" evidence=ISS;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007067 "mitosis" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000228
GO:GO:0007062 eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AF400129 IPI:IPI00542370 RefSeq:NP_197131.2
UniGene:At.10001 UniGene:At.67257 ProteinModelPortal:Q8W1Y0
PaxDb:Q8W1Y0 PRIDE:Q8W1Y0 EnsemblPlants:AT5G16270.1 GeneID:831487
KEGG:ath:AT5G16270 TAIR:At5g16270 HOGENOM:HOG000090768
InParanoid:Q8W1Y0 OMA:EYNQDAS PhylomeDB:Q8W1Y0
ProtClustDB:CLSN2690166 Genevestigator:Q8W1Y0 Uniprot:Q8W1Y0
Length = 1031
Score = 959 (342.6 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 195/292 (66%), Positives = 219/292 (75%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+ PIALRLSSHLL
Sbjct: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIYSRKVNYLFDDCSEALLK+KQAFRS AVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61 LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120
Query: 121 LPDNDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGDASQMGXXXXXXX 180
LPDN+IFQGNYVDHHVST+EQITLQDTMDG+ YSTSQFGLDERFGDGD SQ
Sbjct: 121 LPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180
Query: 181 XXXKGTAAG--HGVSDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLD 238
K GV D + I + M +SE ++ Q+E + ++
Sbjct: 181 FQDKDVIGSDDEGVPGIDHNAYLDAAA----PGIKDSMEGVSEAMPMDFNEEQVEDLAMN 236
Query: 239 AEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVN 290
E IE A+AP TPGLV+ PN SS ++ +A DH + ED N+ E + + +N
Sbjct: 237 NEFIEDAQAPQTPGLVEVPNSSSVREQMACDDHMDVEDLNAEEGIKSSGELN 288
Score = 705 (253.2 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 222/642 (34%), Positives = 318/642 (49%)
Query: 477 EETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQG 536
EE + ++V PC H + M PG Q + G ++ + + ++ G
Sbjct: 331 EEERAEHVHVTSPCCSHITT-EMEDPG------QVMNEAGANVVPDKPDAV--PPLETPG 381
Query: 537 EECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAP 596
EE + +E +Q + S+ GD Q + D L+NA ++ +L L SD P P
Sbjct: 382 EENRDHFAIATEVNQETDSSLQGDEQAYSRP-DGQLNNAHETDEQLGNLTGFTDSDFPPP 440
Query: 597 EKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNS 656
EK+L+VP ND +VESTP+KE G+ DAGN +GKKR++TEST+T ESLNS
Sbjct: 441 EKVLAVPNRQ-GDGNDFMVESTPDKED-PGTCNDDAGNNNITGKKRTFTESTLTAESLNS 498
Query: 657 SESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNA 716
ES G+ ++KR ++ +P ILVG KSS LKM+PTP V E A+ KR RSA ++ A
Sbjct: 499 VESVGLIQSKRTADSVPDDDDLLSSILVG-KSSFLKMRPTP-VLEPATTKRLRSAPRSTA 556
Query: 717 LKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIF 776
KRKVLMDD MVLHGD+IRQQLTNTEDIRR+RKKAPCT PEI+M+Q Q LED +F EPIF
Sbjct: 557 TKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIF 616
Query: 777 TGMSAELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVAL 836
TGMS EL S+H E +DL I I E D H S D CS+ V E + S +P A
Sbjct: 617 TGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSVTA-VEENKTEESSDPQAH 675
Query: 837 RNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVD 896
N+ + QP + Q I+ Q ++ + SD +V+K N E+N + +D
Sbjct: 676 PNDCEEQPGTAHTHPQEEQTINQQEELKDDNELAE-KSDLEVLKE-GNGAADEVNLVVID 733
Query: 897 RGNVEVAEEASCSVNHGFGTSSQTD---VASAEVCNQPTGDKTNTVDASLLVDTVCLTPE 953
+ +EE V S + +VC P V DT
Sbjct: 734 DVSQIPSEEKLDRVEDLQVEESHENHDGEGGQDVCADPNEKSCTDVIEIAEGDTDI---N 790
Query: 954 PTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSV 1013
P + ++V + D K EV + ++ + T+ +E G +
Sbjct: 791 PIFNEMDLKVEDELPHEDE-KTDASAEVSELGRDDQTPCDNTVGSTETGCLEAG----DL 845
Query: 1014 ENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANG-DNSRLEVRNEDGPLAGDWGS- 1071
N A +E L +A N+ +G++ ET YN N N ++N L G+ S
Sbjct: 846 SNMA-LENCNEPLVEA-NS-DGLNPETESYNKYEPHNEMSNEEASMQNA---LDGEHTSR 899
Query: 1072 NGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQVD 1113
+G ++ M + E D T + + D ++ ++ Q D
Sbjct: 900 DGLMGDNDEMDTMENAHD-TGFLNVDDDEVDEDHEEDDIQYD 940
Score = 352 (129.0 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
Identities = 122/381 (32%), Positives = 182/381 (47%)
Query: 880 KTVQN-EPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASA---EVCNQPTG-- 933
KT ++ +P A N+ + G + ++N ++A EV + G
Sbjct: 665 KTEESSDPQAHPNDCEEQPGTAHTHPQEEQTINQQEELKDDNELAEKSDLEVLKEGNGAA 724
Query: 934 DKTNTVDASLLVDTVCLTP-EPTVD-AQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVA 991
D+ N V ++D V P E +D + ++V S D +G +D D N ++
Sbjct: 725 DEVNLV----VIDDVSQIPSEEKLDRVEDLQVEESHENHDG-EGGQDV-CADPNEKSCTD 778
Query: 992 VETEAKGTDGVLVEEGKVGVSVENGA---DVETDRSVLTDAVNTQEGVSLE-TGGYNDLA 1047
V A+G + ++ + VE+ D +TD S + + + T G +
Sbjct: 779 VIEIAEGDTDINPIFNEMDLKVEDELPHEDEKTDASAEVSELGRDDQTPCDNTVGSTETG 838
Query: 1048 AAN-GDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLD 1106
GD S + + N + PL + S+G +P + EP + +N ++ +LD
Sbjct: 839 CLEAGDLSNMALENCNEPLV-EANSDGLNPETESYNKYEPHNEMSNEEA----SMQNALD 893
Query: 1107 DGKSQVDLRSPMDDGRMEIEEVTIGNDTEFLXXXXXXXXXXXXXXXXCPED-ARVLENSG 1165
+ D M D E++ + +DT FL +D R+LENSG
Sbjct: 894 GEHTSRD--GLMGDND-EMDTMENAHDTGFLNVDDDEVDEDHEEDDIQYDDETRLLENSG 950
Query: 1166 WSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVE 1225
WSSRTRAV+KYLQTLF +E G+ VL D LL GKTRKEASRMFFETLVLKT+DYI VE
Sbjct: 951 WSSRTRAVAKYLQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVE 1010
Query: 1226 QARPLDNINIKPGAKLMKADF 1246
Q +P ++I IKP KL K+ F
Sbjct: 1011 QGKPYESIIIKPRPKLTKSIF 1031
Score = 67 (28.6 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 78/354 (22%), Positives = 127/354 (35%)
Query: 236 GLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFES----EDQNSNELMATESRVND 291
GL EPI + L EP G + + D S ED + E++ +
Sbjct: 609 GLFKEPIFTGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSVTAVEENKTEE 668
Query: 292 LSNSDCHNGDGHTADWPLHKDSNHD-TV--QCMLPEKNGYHVR-DAAV-KQAESLGESVK 346
S+ H D H + T+ Q L + N + D V K+ + V
Sbjct: 669 SSDPQAHPNDCEEQPGTAHTHPQEEQTINQQEELKDDNELAEKSDLEVLKEGNGAADEV- 727
Query: 347 SMPFVPDGSEGTINPLDGSKRFKNLQ--NAPGMLSGES-QQVNSDKTAASLNCTNVTCDM 403
++ + D S+ I + R ++LQ + GE Q V +D S CT+V
Sbjct: 728 NLVVIDDVSQ--IPSEEKLDRVEDLQVEESHENHDGEGGQDVCADPNEKS--CTDVIEIA 783
Query: 404 Q---DLNP----ETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDA 456
+ D+NP +P ED D A + +D DN GS
Sbjct: 784 EGDTDINPIFNEMDLKVEDELP-HEDEKTDASAEVSELGRDDQTPCDNTVGSTET----- 837
Query: 457 DIHACPDAKDPKMLNIDVAHEETASVSINVLKPC--SYHTSDPHMSSPGHDNSLAQNLQP 514
C +A D + ++ +E + + L P SY+ +PH + S+ L
Sbjct: 838 ---GCLEAGDLSNMALENCNEPLVEANSDGLNPETESYNKYEPHNEMSNEEASMQNALD- 893
Query: 515 LGVDLHSSERSKM-NQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGT 567
G H+S M + +D E + T + + ++ DIQ D+ T
Sbjct: 894 -GE--HTSRDGLMGDNDEMDTM-ENAHDTGFLNVDDDEVDEDHEEDDIQYDDET 943
Score = 59 (25.8 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 29/137 (21%), Positives = 61/137 (44%)
Query: 493 HTSDPHMSSPGHDNSL--AQNLQPLGVDLHSSERSKMNQASV-DVQGEECY-LTDVMQSE 548
H + ++PG +S+ P+ + E MN + D Q + L +V S
Sbjct: 199 HNAYLDAAAPGIKDSMEGVSEAMPMDFNEEQVEDLAMNNEFIEDAQAPQTPGLVEVPNS- 257
Query: 549 KSQISGPSVCGDIQE-DNGTLDEPLDNATASN-NELKKLNNSITSDLPAPEKLLSVPEGL 606
S + C D + ++ +E + ++ N NE+ K ++S+ APE ++ E
Sbjct: 258 -SSVREQMACDDHMDVEDLNAEEGIKSSGELNANEMPKRGEDLSSEYNAPESAVTPVEVD 316
Query: 607 LNKPNDLI-VESTPEKE 622
++ ++ + ++ PE+E
Sbjct: 317 KSQIDENVNTQNEPEEE 333
Score = 38 (18.4 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 444 NAAGSGSLVVVDADIHACPDAKDPKMLNIDVAH 476
N G G+ D + + PD +DP N D +
Sbjct: 448 NRQGDGN----DFMVESTPDKEDPGTCNDDAGN 476
Score = 38 (18.4 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 210 DNISERMNEISEERTVNDGANQLERVGL 237
+NI+ + +E + N +E VGL
Sbjct: 477 NNITGKKRTFTESTLTAESLNSVESVGL 504
Score = 38 (18.4 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 573 DNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGS 627
D+ + + ++K+ S DLP E L + DL P+ E+ G+
Sbjct: 76 DDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFELPDNEIFQGN 130
>TAIR|locus:2164501 [details] [associations]
symbol:SYN2 species:3702 "Arabidopsis thaliana"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0000798 "nuclear cohesin complex"
evidence=ISS] [GO:0007067 "mitosis" evidence=IEP;RCA] [GO:0006302
"double-strand break repair" evidence=RCA;IMP] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0010212 "response to ionizing radiation" evidence=RCA]
[GO:0010332 "response to gamma radiation" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0006302
EMBL:AB011477 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AF281154 EMBL:AF400126 EMBL:AF400127 IPI:IPI00520467
IPI:IPI00524230 RefSeq:NP_568586.2 RefSeq:NP_851110.1
UniGene:At.9228 ProteinModelPortal:Q9FQ20 STRING:Q9FQ20
PaxDb:Q9FQ20 PRIDE:Q9FQ20 EnsemblPlants:AT5G40840.2 GeneID:834084
KEGG:ath:AT5G40840 TAIR:At5g40840 eggNOG:NOG315638
HOGENOM:HOG000064652 InParanoid:Q9FQ20 OMA:AIWVAAY PhylomeDB:Q9FQ20
ProtClustDB:CLSN2680390 Genevestigator:Q9FQ20 GermOnline:AT5G40840
GO:GO:0000798 Uniprot:Q9FQ20
Length = 810
Score = 297 (109.6 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 74/173 (42%), Positives = 107/173 (61%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVP-IALRLSSHL 59
MFYS ++++KGPLG IW+AA+ +KL+K+QV T I SVD IL ++ + R+ ++L
Sbjct: 1 MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60
Query: 60 LLGVVRIYSRKVNYLFDDCSEALLKIKQAF------RSTAVDLPPEESTAPYHSITLPET 113
LLGVVRIYS+KV++LFDDC++AL+ +K+ T V LP ++ SI LPE
Sbjct: 61 LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLP---ASIECFSIALPER 117
Query: 114 FDLDDFELPDNDIFQGNYVDHHVSTREQITLQD---TMDGM-AYSTSQFGLDE 162
F+LD F+L + F G V H E ITL+D + M YS +F ++E
Sbjct: 118 FELDAFDLGVLEDFHGGNVKPH----EDITLKDGSQETERMDMYSMERFDMEE 166
Score = 165 (63.1 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 37/91 (40%), Positives = 59/91 (64%)
Query: 1156 EDARVLENSGWSSRTRAVSKYLQTLFV--REPVQGRKVLALDHLLVGKTRKEASRMFFET 1213
++ + L+ WSSRTR V+K+L+ F+ RE + KV L L G+T+KE++R+F+ET
Sbjct: 720 DERQDLQQETWSSRTRNVAKFLEKTFLEQREREEEEKVSLLQ-LCRGRTQKESARLFYET 778
Query: 1214 LVLKTKDYIHVEQARPLDNINIKPGAKLMKA 1244
LVLKTK Y+ V+Q P ++ + ++ KA
Sbjct: 779 LVLKTKGYVEVKQNHPYSDVFLMRVSRPQKA 809
Score = 115 (45.5 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 71/297 (23%), Positives = 125/297 (42%)
Query: 517 VDLHSSERSKMNQA--SVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDN 574
VD H S +++ + +++ E+ + + S PS CG + +G D+P
Sbjct: 271 VDSHESSGDNLHRDGHTENLESEKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQP-SG 329
Query: 575 ATASNNELKKLNNSITSDLPAPEKLLS---VPEGLLNKPNDLIVESTPEKEVLAGSGGVD 631
AT N E K++ T + P P + + EG+ K D + E+ GS
Sbjct: 330 ATRINGE-KEIPEMSTLEKPEPVSVTGSRDLQEGV-EKCRDHNEAEMADFELFHGSHKEQ 387
Query: 632 AG-NKLN-SGKKRSYTESTITVESLNSSESFGVDRTKRNSEFIPXXXXXXXXILVGRKSS 689
+ +++N G ++ + S +TV SSE D + P I G S
Sbjct: 388 SETSEVNLHGSEKGFL-SDMTVSKDPSSEFNATDTPVTVTPKTPSRLK----ISEGGTSP 442
Query: 690 VLKMKPTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRK 749
+ PTP +E S + +R KRK L+DD +++ V+++ + ++ + R+
Sbjct: 443 QFSIIPTPAAKE--SSRVSR--------KRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRR 492
Query: 750 KAPCTG-PEILMIQMQFLED-DIFNEPIFTGMSAELTSVHCEIHDLSKISISETDKD 804
P T PE +F F EP+ S++L S+ C+ L + + T KD
Sbjct: 493 NVPHTDCPE--RRTKRFANPFRSFLEPLIQYGSSDLQSLFCQPIKLKNWATTGTPKD 547
Score = 54 (24.1 bits), Expect = 8.3e-35, Sum P(3) = 8.3e-35
Identities = 43/225 (19%), Positives = 90/225 (40%)
Query: 380 GESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKS---H 436
G ++ + S+KT+ +C + D + L P C + ED+ + N +K
Sbjct: 285 GHTENLESEKTSKKTSCEEMQHD-RSL-PSECGIPEAIHGIEDQPSGATRINGEKEIPEM 342
Query: 437 NDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAH----EETASVSINVLKPCSY 492
+ E + + +GS + + + C D + +M + ++ H E++ + +N+
Sbjct: 343 STLEKPEPVSVTGSRDLQEG-VEKCRDHNEAEMADFELFHGSHKEQSETSEVNLHGSEKG 401
Query: 493 HTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQI 552
SD +S A + P+ V + R K+++ Q + E S++
Sbjct: 402 FLSDMTVSKDPSSEFNATDT-PVTVTPKTPSRLKISEGGTSPQFS--IIPTPAAKESSRV 458
Query: 553 SGPSVC---GDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLP 594
S C ++ N + E +++ S+ L K N +D P
Sbjct: 459 SRKRKCLIDDEVIIPNKVMKEMIED---SSKLLAKRRNVPHTDCP 500
Score = 42 (19.8 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 39/173 (22%), Positives = 67/173 (38%)
Query: 540 YLTDVMQSEKSQISGPSVCGDIQEDN-GTLDEPLDNATASNNELKKLNNSITSDLPAPEK 598
+L ++Q S + C I+ N T P D A + E L+ + +P
Sbjct: 514 FLEPLIQYGSSDLQS-LFCQPIKLKNWATTGTPKDTKIARHKEKSSLDT-----VRSPGV 567
Query: 599 LLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSE 658
+LS + N + TP+ LAG V AGN N ST T + + +E
Sbjct: 568 ILSSDQ----TENTQEIMETPQAAALAGLK-VTAGNS-NVVSVEMGASST-TSGTAHQTE 620
Query: 659 SFGVDRTKRNSEFIPXX-XXXXXXILVGRKSSVL----KMKPTPPVREVASRK 706
+ + + S P ++ ++ V+ ++ P PVRE S++
Sbjct: 621 N-AAETPVKPSVIAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKR 672
>TAIR|locus:2097548 [details] [associations]
symbol:SYN3 "AT3G59550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0000798 "nuclear cohesin complex"
evidence=ISS] [GO:0007067 "mitosis" evidence=IEP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0000280 "nuclear division" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0042023 "DNA endoreduplication" evidence=RCA] [GO:0051225
"spindle assembly" evidence=RCA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007059 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0009555 GO:GO:0009561 EMBL:AL138659
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
GO:GO:0000798 EMBL:AF281155 EMBL:AF400128 IPI:IPI00518598
IPI:IPI00541511 IPI:IPI00548487 PIR:T49296 RefSeq:NP_191514.1
UniGene:At.1119 ProteinModelPortal:Q9FQ19 SMR:Q9FQ19 PaxDb:Q9FQ19
PRIDE:Q9FQ19 EnsemblPlants:AT3G59550.1 GeneID:825124
KEGG:ath:AT3G59550 TAIR:At3g59550 HOGENOM:HOG000090294
InParanoid:Q9FQ19 OMA:TVWCAAH PhylomeDB:Q9FQ19
ProtClustDB:CLSN2915554 Genevestigator:Q9FQ19 GermOnline:AT3G59550
Uniprot:Q9FQ19
Length = 693
Score = 384 (140.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 110/316 (34%), Positives = 165/316 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFYS +LA+KGPLGT+W AAH+ ++L+K+Q +I +VD+I+FP+VP+ALR SSHLL
Sbjct: 1 MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
+GVVRIYS+KV+YL++D + + +AF ST V+LP + AP S+TLP+ +LD+F+
Sbjct: 61 VGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEFD 120
Query: 121 LPDNDIFQGNYVDHHVSTREQITLQDTMD-GM-AYSTSQFGLD---ERFG-DGDASQMGX 174
L D D + D+H + E ITL D + G+ Y F D E D D S
Sbjct: 121 LED-DTLDMEF-DNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTEPV 178
Query: 175 XXXXXXXXXKGTAAGHGVSDADPQGS--VKPTTHWEQDNISERMNEI--------SEERT 224
+ TA G D +P+ S T + N++E E+ +EER
Sbjct: 179 SRHTGEIDVE-TAHETG-PDNEPRDSNIAFDTGTYSPRNVTEEFTEVQDPRQSNLTEERI 236
Query: 225 VNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMA 284
N N G E +A P+ ++ Q+ + + ES D+ NE
Sbjct: 237 PNSERNDATSPGTVPEIERMRDAAHDLSPTSHPSFAAQQQDVR-VERTESLDETLNEKEP 295
Query: 285 TESRVND-LSNSDCHN 299
T +++ + NS H+
Sbjct: 296 TIPSIDEEMLNSGRHS 311
Score = 135 (52.6 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKV---LALDHLLVGKTRKEASRMFFETLVLKT 1218
+++ + R RA+++YL+ P L+L +L GKTRK A+RMFFETLVLK+
Sbjct: 605 DSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLKS 664
Query: 1219 KDYIHVEQARPLDNINIK 1236
+ I ++Q RP +I +K
Sbjct: 665 RGLIDMQQDRPYGDIALK 682
Score = 115 (45.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 58/227 (25%), Positives = 97/227 (42%)
Query: 578 SNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLN 637
SN +++ NS +D +P + + E + + +DL S P V+ L+
Sbjct: 229 SNLTEERIPNSERNDATSPGTVPEI-ERMRDAAHDLSPTSHPSFAAQQQDVRVERTESLD 287
Query: 638 SG-KKRSYTESTITVESLNSSESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPT 696
++ T +I E LNS + + S V S L ++P+
Sbjct: 288 ETLNEKEPTIPSIDEEMLNSGRHSAFE-LRSGSPGSAAGSEEERADFV-HPSPQLVLQPS 345
Query: 697 PPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGP 756
PP + ++RAR KRK D VL I ++L + D R RKK P +
Sbjct: 346 PPPQP---QRRAR--------KRKNF-DGVTVLTNKNISERLKDPSDTLRKRKKMPSSKL 393
Query: 757 EILMIQMQFLEDDIFNEPIFTGMSAELTSVHCEIHDLSKISISETDK 803
+ + Q +D FNEP+FTG S +L +V + + SK ++ +D+
Sbjct: 394 KFWRMNNQSRKDQNFNEPLFTGFSDDLRNVFEKDYVASKPHLAVSDE 440
Score = 58 (25.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 560 DIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTP 619
D+++D TLD DN T S ++ L + I + + P ++ E ++++ + V+ +
Sbjct: 120 DLEDD--TLDMEFDNHTRSEEDIT-LTDQIPTGID-PYVAVTFDEDIISESIPMDVDQST 175
Query: 620 EKEVLAGSGGVDAGNKLNSGKKRSYTESTITVES 653
E V +G +D +G +S I ++
Sbjct: 176 EP-VSRHTGEIDVETAHETGPDNEPRDSNIAFDT 208
Score = 55 (24.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 722 LMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNE--PIFTGM 779
L DDT+ + D + EDI + + P TG + + + F ++DI +E P+
Sbjct: 121 LEDDTLDMEFD---NHTRSEEDIT-LTDQIP-TGIDPY-VAVTF-DEDIISESIPMDVDQ 173
Query: 780 SAELTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIE 824
S E S H D+ + D + S IA D G NV E
Sbjct: 174 STEPVSRHTGEIDVETAHETGPDNEPRDSNIAFDTGTYSPRNVTE 218
Score = 48 (22.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 28/107 (26%), Positives = 44/107 (41%)
Query: 946 DTVCLTPEPTVDAQPVEVGTSVAKMDN-AKGVED---TEVIDRNIENIVAV---ETEAKG 998
++V L +D +E T + DN + ED T+ I I+ VAV E
Sbjct: 106 ESVTLPQALNLDEFDLEDDTLDMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISE 165
Query: 999 TDGVLVEEGKVGVSVENGA-DVETDRSVLTDAVNTQEGVSLETGGYN 1044
+ + V++ VS G DVET D ++ +TG Y+
Sbjct: 166 SIPMDVDQSTEPVSRHTGEIDVETAHETGPDNEPRDSNIAFDTGTYS 212
>UNIPROTKB|O60216 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0071168 "protein localization to
chromatin" evidence=IMP] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=TAS]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008278 "cohesin
complex" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0006915
Reactome:REACT_115566 GO:GO:0007059 EMBL:CH471060 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0006357
Reactome:REACT_111183 GO:GO:0006302 GO:GO:0007091 GO:GO:0007131
GO:GO:0000228 GO:GO:0000236 GO:GO:0008278 Orphanet:199
GO:GO:0071168 CTD:5885 eggNOG:NOG249424 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:X98294 EMBL:D38551
EMBL:AY675320 EMBL:AK289505 EMBL:BC050381 IPI:IPI00006715
RefSeq:NP_006256.1 UniGene:Hs.81848 ProteinModelPortal:O60216
SMR:O60216 DIP:DIP-29201N IntAct:O60216 MINT:MINT-2999858
STRING:O60216 PhosphoSite:O60216 PaxDb:O60216 PeptideAtlas:O60216
PRIDE:O60216 Ensembl:ENST00000297338 GeneID:5885 KEGG:hsa:5885
UCSC:uc003yod.3 GeneCards:GC08M117858 HGNC:HGNC:9811 HPA:CAB022065
HPA:HPA020044 MIM:606462 MIM:614701 neXtProt:NX_O60216
PharmGKB:PA34170 InParanoid:O60216 PhylomeDB:O60216
BioCyc:MetaCyc:ENSG00000164754-MONOMER ChiTaRS:RAD21
GenomeRNAi:5885 NextBio:22884 PMAP-CutDB:O60216 ArrayExpress:O60216
Bgee:O60216 CleanEx:HS_RAD21 Genevestigator:O60216
GermOnline:ENSG00000164754 Uniprot:O60216
Length = 631
Score = 376 (137.4 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 95/273 (34%), Positives = 145/273 (53%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
+ S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 552 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 608
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 609 IELTQEEPYSDIIATPGPR 627
Score = 55 (24.4 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 405 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 464
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 503 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 558
Query: 465 KDPKMLN-IDVAHEETASVSINVLKPC 490
+ +ML+ + A +T + SI++L+ C
Sbjct: 559 RTQQMLHGLQRALAKTGAESISLLELC 585
>UNIPROTKB|Q3SWX9 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9913 "Bos taurus" [GO:0071168 "protein
localization to chromatin" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 GO:GO:0006915 GO:GO:0007059 GO:GO:0000775
GO:GO:0051301 GO:GO:0007067 GO:GO:0006281 GO:GO:0006357
GO:GO:0000228 GO:GO:0071168 EMBL:BC104612 IPI:IPI00708412
RefSeq:NP_001029889.1 UniGene:Bt.15668 ProteinModelPortal:Q3SWX9
STRING:Q3SWX9 PRIDE:Q3SWX9 Ensembl:ENSBTAT00000009607 GeneID:540966
KEGG:bta:540966 CTD:5885 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 InParanoid:Q3SWX9 KO:K06670 OMA:VPREEQQ
OrthoDB:EOG47PX5K NextBio:20878937 Gene3D:1.10.10.580
InterPro:IPR023093 Uniprot:Q3SWX9
Length = 630
Score = 374 (136.7 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 95/273 (34%), Positives = 144/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLASTGASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 551 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 607
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 608 IELTQEEPYSDIIATPGPR 626
Score = 55 (24.4 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 405 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 464
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 502 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 557
Query: 465 KDPKMLN-IDVAHEETASVSINVLKPC 490
+ +ML+ + A +T + SI++L+ C
Sbjct: 558 RTQQMLHGLQRALAKTGAESISLLELC 584
>UNIPROTKB|E2QRU9 [details] [associations]
symbol:RAD21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071168 "protein localization to chromatin"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0006357
GO:GO:0000228 GO:GO:0071168 CTD:5885 GeneTree:ENSGT00390000011606
KO:K06670 OMA:VPREEQQ Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AAEX03008760 RefSeq:XP_539142.2 Ensembl:ENSCAFT00000001286
GeneID:482021 KEGG:cfa:482021 NextBio:20856709 Uniprot:E2QRU9
Length = 631
Score = 374 (136.7 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 95/273 (34%), Positives = 144/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 552 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 608
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 609 IELTQEEPYSDIIATPGPR 627
Score = 55 (24.4 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 405 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 464
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 503 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 558
Query: 465 KDPKMLN-IDVAHEETASVSINVLKPC 490
+ +ML+ + A +T + SI++L+ C
Sbjct: 559 RTQQMLHGLQRALAKTGAESISLLELC 585
>UNIPROTKB|F1S1K0 [details] [associations]
symbol:LOC100738633 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GeneTree:ENSGT00390000011606 KO:K06670 OMA:VPREEQQ
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:AEMK01148771
EMBL:CU467777 EMBL:CU656020 RefSeq:XP_003481396.1
Ensembl:ENSSSCT00000006600 Ensembl:ENSSSCT00000033947
GeneID:100738633 KEGG:ssc:100738633 Uniprot:F1S1K0
Length = 631
Score = 374 (136.7 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 95/273 (34%), Positives = 144/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N+S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMG 273
Score = 85 (35.0 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 552 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 608
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 609 IELTQEEPYSDIVATPGPR 627
Score = 55 (24.4 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 48 (22.0 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 405 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 464
+L PE P + + L + + +K+ +D E D A G D + +
Sbjct: 503 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQ---DQEERRW-NK 558
Query: 465 KDPKMLN-IDVAHEETASVSINVLKPC 490
+ +ML+ + A +T + SI++L+ C
Sbjct: 559 RTQQMLHGLQRALAKTGAESISLLELC 585
>UNIPROTKB|O93310 [details] [associations]
symbol:rad21 "Double-strand-break repair protein rad21
homolog" species:8355 "Xenopus laevis" [GO:0071168 "protein
localization to chromatin" evidence=ISS] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0006915
GO:GO:0007059 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0000228 GO:GO:0071168 CTD:5885
HOVERGEN:HBG059956 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AF051786 RefSeq:NP_001083807.1 UniGene:Xl.53864
ProteinModelPortal:O93310 IntAct:O93310 GeneID:399129
KEGG:xla:399129 Uniprot:O93310
Length = 629
Score = 370 (135.3 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 95/272 (34%), Positives = 142/272 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIICPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDERFGDGDASQMGXX 175
LPD +DI + S E+IT+++ + + FG+D+R + S
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVSNINILQDNDFGDFGMDDREMMREGSAFEDD 180
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGS-VKPTTHWEQDNISERMNE--ISEERTVNDGANQL 232
S + + + ++ ++ DN E NE I +++ +++ A +
Sbjct: 181 MLTTNASNLKLEPEQSTSQLNEKSNHLEYDDQYKDDNFGEG-NEGGILDDKLLSNDAGGI 239
Query: 233 --ERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ + E + E P L + N+S G
Sbjct: 240 FDDPPAMPEEGVAMPEQPVHDDLDDDDNVSMG 271
Score = 86 (35.3 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + + G + ++L L RK+A+ F+ LVLK +
Sbjct: 550 EERRWNKRTQQMLHGLQRVLAKT---GAESISLLDLCRNTNRKQAAAKFYSFLVLKKQQA 606
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 607 IELTQREPYSDIVATPGPR 625
Score = 55 (24.4 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 310 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 355
>ZFIN|ZDB-GENE-060503-223 [details] [associations]
symbol:rad21b "RAD21 homolog (S. pombe) b"
species:7955 "Danio rerio" [GO:0000228 "nuclear chromosome"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 ZFIN:ZDB-GENE-060503-223 EMBL:CR786578 GO:GO:0000228
eggNOG:NOG249424 GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:CR848704 IPI:IPI00491569
RefSeq:NP_001038585.1 UniGene:Dr.84558 Ensembl:ENSDART00000051717
Ensembl:ENSDART00000132800 GeneID:566831 KEGG:dre:566831 CTD:566831
NextBio:20888396 Uniprot:Q1L8E1
Length = 637
Score = 372 (136.0 bits), Expect = 8.5e-36, Sum P(3) = 8.5e-36
Identities = 97/263 (36%), Positives = 140/263 (53%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGDASQMGXXXXXX 179
LPD +DI + S E+IT+++ + ++ D FG D M
Sbjct: 121 LPDLDDIDVAQQFTLNQSRVEEITMREEVGNLSLLQENDFAD--FGMDDREMMREEGAFE 178
Query: 180 XXXXKGTAAGHGVSDADPQGSVK---PTTHWEQDNISERMNEISEERTVNDGANQLERV- 235
G +A + + +++ SV+ T H E D + + E T +G ++++
Sbjct: 179 VDIIHGASASNLLLESE-SSSVQIADKTNHLEYDQYKDDFGDNPMEST--EGGMLVDKLL 235
Query: 236 -GLDAEPIEYAEAPSTPGLVQEP 257
D I + + P+ P V P
Sbjct: 236 SNEDGGGI-FDDPPAIPEGVMMP 257
Score = 83 (34.3 bits), Expect = 8.5e-36, Sum P(3) = 8.5e-36
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + + G + ++L L +K+A+ F+ LVLK +
Sbjct: 558 EERRWNKRTQQMLHGLQRVIAKT---GAESISLLDLCRNNNKKQAAAKFYSFLVLKKQQA 614
Query: 1222 IHVEQARPLDNINIKPGAK 1240
+ + Q P +I PG +
Sbjct: 615 VELRQDEPYSDIIATPGPR 633
Score = 55 (24.4 bits), Expect = 8.5e-36, Sum P(3) = 8.5e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 316 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 361
>UNIPROTKB|F1NYD0 [details] [associations]
symbol:RAD21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0071168 "protein localization to
chromatin" evidence=IEA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 GO:GO:0006357 GO:GO:0000228 GO:GO:0071168
GeneTree:ENSGT00390000011606 OMA:VPREEQQ Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AADN02022645 IPI:IPI00679990
Ensembl:ENSGALT00000025968 Uniprot:F1NYD0
Length = 633
Score = 367 (134.2 bits), Expect = 9.3e-36, Sum P(4) = 9.3e-36
Identities = 79/168 (47%), Positives = 107/168 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER 163
LPD +DI + S E+IT+++ + ++ FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQDNDFGDFGMDDR 168
Score = 85 (35.0 bits), Expect = 9.3e-36, Sum P(4) = 9.3e-36
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 554 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 610
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 611 IELTQEEPYSDIIATPGPR 629
Score = 55 (24.4 bits), Expect = 9.3e-36, Sum P(4) = 9.3e-36
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 311 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 356
Score = 42 (19.8 bits), Expect = 9.3e-36, Sum P(4) = 9.3e-36
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 249 STPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWP 308
S L+ EP S+ + +H E EDQ ++ + L + N DG D P
Sbjct: 186 SASNLLLEPEQSTSHLNEKA-NHLEYEDQYKDDNFGEGNDGGILDDKLLSNNDGGIFDDP 244
Score = 39 (18.8 bits), Expect = 4.1e-34, Sum P(4) = 4.1e-34
Identities = 24/118 (20%), Positives = 46/118 (38%)
Query: 509 AQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTL 568
A NL D + E + Q Q + + + + E S++ + G + ++
Sbjct: 409 ADNLDEFLKDFENPEVPREEQQQQQQQQQRDVIDEPILEEPSRLQESMMEGSRTNLDESV 468
Query: 569 DEPLDNATASNNELKKLNNSITSDLPAPEKLLSVP--EGLLNKPNDLIVESTPEKEVL 624
P T +L+++ P P + L +P E +P + I + PE E+L
Sbjct: 469 MPPPPPQTGVKRKLQQVEPEPVLPHP-PSQQLEIPPVEMPPEEPQN-ICQLIPELELL 524
>MGI|MGI:108016 [details] [associations]
symbol:Rad21 "RAD21 homolog (S. pombe)" species:10090 "Mus
musculus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IDA] [GO:0051301 "cell division" evidence=IEA] [GO:0071168
"protein localization to chromatin" evidence=ISO]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
MGI:MGI:108016 GO:GO:0006915 GO:GO:0007059 GO:GO:0005654
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006357 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0071168 CTD:5885 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 ChiTaRS:RAD21 EMBL:D49429
EMBL:X98293 EMBL:AF332086 EMBL:AF332085 EMBL:AK004746 EMBL:AK163992
EMBL:BC043032 IPI:IPI00329840 PIR:JC4248 RefSeq:NP_033035.3
UniGene:Mm.182628 ProteinModelPortal:Q61550 SMR:Q61550
DIP:DIP-56655N IntAct:Q61550 STRING:Q61550 PhosphoSite:Q61550
PaxDb:Q61550 PRIDE:Q61550 Ensembl:ENSMUST00000022927 GeneID:19357
KEGG:mmu:19357 InParanoid:Q810A8 NextBio:296405 Bgee:Q61550
CleanEx:MM_RAD21 Genevestigator:Q61550
GermOnline:ENSMUSG00000022314 GO:GO:0034991 Uniprot:Q61550
Length = 635
Score = 368 (134.6 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 95/273 (34%), Positives = 143/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N S G
Sbjct: 241 IFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLG 273
Score = 85 (35.0 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 556 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 612
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 613 IELTQEEPYSDIIATPGPR 631
Score = 55 (24.4 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 43 (20.2 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 19/87 (21%), Positives = 38/87 (43%)
Query: 405 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 464
+L PE P + + L + + +K+ + E D A G D + +
Sbjct: 507 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEEEEEEEDEDASGGDQ---DQEERRW-NK 562
Query: 465 KDPKMLN-IDVAHEETASVSINVLKPC 490
+ +ML+ + A +T + SI++L+ C
Sbjct: 563 RTQQMLHGLQRALAKTGAESISLLELC 589
>RGD|1594529 [details] [associations]
symbol:Rad21 "RAD21 homolog (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0008278 "cohesin complex" evidence=ISO]
[GO:0034991 "nuclear meiotic cohesin complex" evidence=IEA;ISO]
[GO:0071168 "protein localization to chromatin" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 RGD:1594529
GO:GO:0006357 GO:GO:0000228 EMBL:CH473950 GO:GO:0071168 CTD:5885
eggNOG:NOG249424 GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 KO:K06670 OMA:VPREEQQ OrthoDB:EOG47PX5K
Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:BC099200 IPI:IPI00360494
RefSeq:NP_001020872.1 UniGene:Rn.3991 STRING:Q4KLH7
Ensembl:ENSRNOT00000006209 GeneID:314949 KEGG:rno:314949
UCSC:RGD:1594529 InParanoid:Q4KLH7 NextBio:668408
Genevestigator:Q4KLH7 Uniprot:Q4KLH7
Length = 635
Score = 368 (134.6 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 95/273 (34%), Positives = 143/273 (52%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER--FGDGDASQMG 173
LPD +DI + S E+IT+++ + ++ FG+D+R +G A +
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDREIMREGSAFEDD 180
Query: 174 XXXXXXXXXXKGTAAGHGVSDADPQ-GSVKPTTHWEQDNISERMNE-ISEERTV--NDGA 229
S+ + + ++ ++ DN E + I +++ + NDG
Sbjct: 181 DMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDGG 240
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSG 262
+ L + E P+ + ++ N S G
Sbjct: 241 IFDDPPALSETGVMLPEQPAHDDMDEDDNGSLG 273
Score = 85 (35.0 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + G + ++L L RK+A+ F+ LVLK +
Sbjct: 556 EERRWNKRTQQMLHGLQRALAKT---GAESISLLELCRNTNRKQAAAKFYSFLVLKKQQA 612
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 613 IELTQEEPYSDIIATPGPR 631
Score = 55 (24.4 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ +T A KRK+++D L IR QL++ DI AP T
Sbjct: 312 TVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPT 357
Score = 43 (20.2 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 19/87 (21%), Positives = 38/87 (43%)
Query: 405 DLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDA 464
+L PE P + + L + + +K+ + E D A G D + +
Sbjct: 507 ELPPEEPPNICQLIPELELLPEKEKEKEKEKEEEEEEEDEDASGGDQ---DQEERRW-NK 562
Query: 465 KDPKMLN-IDVAHEETASVSINVLKPC 490
+ +ML+ + A +T + SI++L+ C
Sbjct: 563 RTQQMLHGLQRALAKTGAESISLLELC 589
>ZFIN|ZDB-GENE-030131-994 [details] [associations]
symbol:rad21a "RAD21 homolog (S. pombe) a"
species:7955 "Danio rerio" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 ZFIN:ZDB-GENE-030131-994 GO:GO:0043565
GO:GO:0006357 GO:GO:0043280 GO:GO:0000228 GO:GO:0007064
HOVERGEN:HBG059956 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:BC045311 IPI:IPI01005011 RefSeq:NP_955889.1 UniGene:Dr.94731
ProteinModelPortal:Q7ZW30 STRING:Q7ZW30 GeneID:322275
KEGG:dre:322275 CTD:322275 InParanoid:Q7ZW30 NextBio:20807742
ArrayExpress:Q7ZW30 Uniprot:Q7ZW30
Length = 643
Score = 370 (135.3 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 91/225 (40%), Positives = 130/225 (57%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP + A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEDNREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAYST-SQFGLDERFGDGDASQMGXXXXX 178
LPD +DI + S E+IT+++ + ++ T + FG D FG D M
Sbjct: 121 LPDLDDIDVAQQFTLNQSRVEEITMREEVGNISLMTDNDFG-D--FGMDDREMMREENAF 177
Query: 179 XXXXXKGTAAGHGVSDADPQGSVKP--TTHWEQDNISERMNEISE 221
+ +AA + +A+P + P T + + D+ + E S+
Sbjct: 178 GDIIHESSAANL-LLEAEPGPAHLPDKTPNLDYDDFGDNNLENSD 221
Score = 83 (34.3 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E W+ RT+ + LQ + + G + + L L +K+A+ F+ LVLK +
Sbjct: 564 EERRWNKRTQQMLHGLQRVVAKT---GAQSIGLLELCRNNNKKQAAAKFYSFLVLKKQQA 620
Query: 1222 IHVEQARPLDNINIKPGAK 1240
I + Q P +I PG +
Sbjct: 621 IDLTQTEPYSDIIAAPGPR 639
Score = 55 (24.4 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 710 SASQTNAL-KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLED 768
+ +T A KRK+++D L IR QL++ DI AP T +++M + +
Sbjct: 313 TVKETKAKRKRKLIVDSLKELDSKTIRAQLSDYSDIVTTLDLAPPT-KKLMMWKETGGVE 371
Query: 769 DIFN---EPIFTG 778
+F+ +P++ G
Sbjct: 372 KLFSLPAQPLWNG 384
Score = 47 (21.6 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 993 ETEAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGD 1052
+ + +DG ++ + K+ +S E+G + D +TD+V + + +++ + A G
Sbjct: 214 DNNLENSDGGILMD-KI-LSNEDGGGIFDDPPAITDSVMMPQDHGDDDDDFDNFSPAGGP 271
Query: 1053 NSRLEVRNEDGPLAGDWGSNGKD----PTSNHMFSEEPVIDST 1091
+S E P D + P + F+ EP ID T
Sbjct: 272 DSPDSGPVEPLPNTTDQTDQTEQTTLVPNEDEAFALEP-IDIT 313
>FB|FBgn0260987 [details] [associations]
symbol:vtd "verthandi" species:7227 "Drosophila melanogaster"
[GO:0006289 "nucleotide-excision repair" evidence=NAS] [GO:0008278
"cohesin complex" evidence=ISS;IDA;NAS;IPI] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS;IMP;NAS] [GO:0000775
"chromosome, centromeric region" evidence=NAS] [GO:0007067
"mitosis" evidence=IMP] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0005705 "polytene chromosome interband"
evidence=IDA] [GO:0016322 "neuron remodeling" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IGI] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0005634
GO:GO:0007052 GO:GO:0016322 GO:GO:0010628 GO:GO:0005721
GO:GO:0000228 GO:GO:0007064 GO:GO:0008278 GO:GO:0005705
EMBL:CM000458 eggNOG:NOG249424 GeneTree:ENSGT00390000011606
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:AF109926
EMBL:AF267746 EMBL:AF267745 EMBL:BT100037 RefSeq:NP_001015132.1
UniGene:Dm.3062 DIP:DIP-18950N MINT:MINT-1730906 STRING:O96689
EnsemblMetazoa:FBtr0113746 GeneID:3354896 KEGG:dme:Dmel_CG17436
UCSC:CG17436-RA CTD:3354896 FlyBase:FBgn0260987 InParanoid:O96689
OMA:KRLMHWK OrthoDB:EOG44J102 GenomeRNAi:3354896 NextBio:849550
Uniprot:O96689
Length = 715
Score = 356 (130.4 bits), Expect = 6.2e-35, Sum P(3) = 6.2e-35
Identities = 81/167 (48%), Positives = 103/167 (61%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ILAKKGPL IW+AAH ++K+ K V +T+I SV+ IL P V +ALR S HLL
Sbjct: 1 MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIYSRK YL DC+EA +KIK AFR VDLP A ++ITLPE F D
Sbjct: 61 LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEGHREANVNAITLPEVFHDFDTA 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGD 166
LP+ NDI + S ++IT+++ ++ S D+ FGD
Sbjct: 121 LPELNDIDIEAQFSINQSRADEITMREDYGSLSLSLQ----DDGFGD 163
Score = 93 (37.8 bits), Expect = 6.2e-35, Sum P(3) = 6.2e-35
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1171 RAVSKYLQTLF--VREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQAR 1228
R ++K LF VR + L L L G +RK+A++ F+ LVLK +H++Q+
Sbjct: 638 RVLNKRAAHLFIDVRAHFIAKDSLELSQLTSGNSRKQAAQKFYSLLVLKKFKVLHIDQSA 697
Query: 1229 PLDNINIKPG 1238
P +I I G
Sbjct: 698 PYADITITRG 707
Score = 60 (26.2 bits), Expect = 6.2e-35, Sum P(3) = 6.2e-35
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 718 KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
KRK+++D+ + G+ ++ QL +T DI AP T
Sbjct: 332 KRKLIIDEIKNISGEEMKAQLADTSDILTTLDLAPPT 368
Score = 54 (24.1 bits), Expect = 2.6e-34, Sum P(3) = 2.6e-34
Identities = 33/116 (28%), Positives = 46/116 (39%)
Query: 273 ESEDQNS-NELMATESRVNDLSNSDCHNGDGHTADWPL-HKDSNHDTVQCMLPEKNGYHV 330
E E +S NEL T +N D + GD A H H + M +
Sbjct: 519 EMEQFSSINELPLTPRNMNHEMGDDFNQGDSTPAGLDHGHATPQHGNIGEM-DHDSVIPT 577
Query: 331 RDAAVKQAESLGESVKSMPFVPDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVN 386
+ AV ES+G SV S V S+ T N L G ++ + + G G+ Q N
Sbjct: 578 KKTAVILNESVGTSVLSDNGV---SKRTNNILKGWDNYE-IPSFVGQNHGDEQMEN 629
Score = 46 (21.3 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 36/156 (23%), Positives = 64/156 (41%)
Query: 260 SSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSNHDTVQ 319
S GQ AL D F Q ++ + V + +SD + + + P S ++++
Sbjct: 222 SFGQPALFEDDLFGDPSQPVEQITKESTTVLNADDSD-EDAIDNIHNVPSPATSLVNSIE 280
Query: 320 CMLPEKN-GYHVRDAAVKQAESLGESVKSMPFVPDGSEG-TINPLDGSKRFKNLQNAPG- 376
E N H A+V + + E + V + EG + PLD S +K + A
Sbjct: 281 DEKEENNLNGH---ASVSENVPMNE----ITLVQNEDEGFALAPLDVSM-YKGVTKAKRK 332
Query: 377 --MLSGESQQVNSDKTAASLNCTNVTCDMQDLNPET 410
++ E + ++ ++ A L T+ DL P T
Sbjct: 333 RKLIIDEIKNISGEEMKAQLADTSDILTTLDLAPPT 368
Score = 43 (20.2 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 493 HTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQS 547
H D + S L N + LGV S E Q S+ Q E + D M+S
Sbjct: 458 HVPDSVVQSLEAPEVLRANHKSLGVSTVSVEIVSKEQESISCQNELTFF-DNMRS 511
Score = 42 (19.8 bits), Expect = 4.6e-33, Sum P(3) = 4.6e-33
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 1083 SEEPVIDSTNSVELGGDTINVSLDDGKSQVDLRSPMD-DGRMEIEEVT-IGNDTE 1135
S+E ID+ ++V ++ S++D K + +L + + E+T + N+ E
Sbjct: 257 SDEDAIDNIHNVPSPATSLVNSIEDEKEENNLNGHASVSENVPMNEITLVQNEDE 311
Score = 37 (18.1 bits), Expect = 4.6e-33, Sum P(4) = 4.6e-33
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 574 NATASNNELKKLNNSITSDLPAPEKL 599
N SN L + +S+ L APE L
Sbjct: 448 NDNMSNLFLDHVPDSVVQSLEAPEVL 473
>UNIPROTKB|F1S874 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070197 "attachment of telomeric heterochromatin to
nuclear envelope" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007129 "synapsis" evidence=IEA] [GO:0007128 "meiotic prophase
I" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
InterPro:IPR006910 Pfam:PF04825 GO:GO:0005634 GO:GO:0007128
GO:GO:0030893 GeneTree:ENSGT00390000011606 OMA:GMQSFSL
EMBL:FP236274 Ensembl:ENSSSCT00000007870 Uniprot:F1S874
Length = 469
Score = 343 (125.8 bits), Expect = 6.8e-34, Sum P(2) = 6.8e-34
Identities = 75/161 (46%), Positives = 101/161 (62%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEALLK+K FR VDLP E A Y +ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEALLKMKMTFRPGLVDLPKESFEATYTAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFG 159
+ N I + + S E+I L +D + + + FG
Sbjct: 119 TQNVNAIDISEHFTPNQSKPEEIPLKEDFGNDLLFPAGSFG 159
Score = 78 (32.5 bits), Expect = 6.8e-34, Sum P(2) = 6.8e-34
Identities = 42/177 (23%), Positives = 74/177 (41%)
Query: 711 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDI 770
A + KRK+L+D + ++ +QLT+ D + + AP T ++M + + D +
Sbjct: 289 AEKRKGKKRKLLIDPVKEISSKIMHRQLTSFTDTLMVLELAPPT-QRLMMWKKKGGADTL 347
Query: 771 FNEPIFTGMSAELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK- 827
+ + AEL + C + K+ K EI N+ N++E
Sbjct: 348 LSTAAQDLIHAELKVLFTKCFLSSGFKLGRKLMQKKSEREEIGNE-------NIVETSMM 400
Query: 828 QGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQN 884
+GS N + +++S E G F N D +INSD D+V+ V +
Sbjct: 401 KGS--------NSLEELSQSSTWKEEIDGSKCSF---NKDTNKNINSDQDIVEMVSS 446
>UNIPROTKB|D2HSB3 [details] [associations]
symbol:RAD21L1 "Double-strand-break repair protein
rad21-like protein 1" species:9646 "Ailuropoda melanoleuca"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005694 "chromosome"
evidence=ISS] [GO:0007128 "meiotic prophase I" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0005634 GO:GO:0007059 GO:GO:0000228 GO:GO:0007128
GO:GO:0030893 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:GL193270
RefSeq:XP_002925456.1 GeneID:100475087 KEGG:aml:100475087
CTD:642636 Uniprot:D2HSB3
Length = 554
Score = 347 (127.2 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 74/161 (45%), Positives = 102/161 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSSKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DC+EALLK+K FR VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCNEALLKMKMTFRPGLVDLPKENFEAAYNAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFG 159
+ N I + + S E+ITL +D + + + FG
Sbjct: 119 TQNVNAIDVSEHFTQNQSKPEEITLREDYSNDLLFQAGSFG 159
Score = 68 (29.0 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 1175 KYLQTL-FVREPVQ-GRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDN 1232
+ LQTL +RE + G + +L L RK+A+ F+ LVLK + I + Q+ P +
Sbjct: 483 RILQTLNSLRESNKMGMQYFSLMKLCRNSDRKQAAAKFYSFLVLKKQQAIELSQSDPYAD 542
Query: 1233 INIKPGAKLMK 1243
I G K
Sbjct: 543 IIATVGPMFYK 553
Score = 59 (25.8 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 711 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
A + A KRK+L+D + ++ +QLT+ D + + AP T
Sbjct: 286 AEKRKAKKRKLLIDPIKEISSKIMHKQLTSFMDTLMVLELAPPT 329
Score = 47 (21.6 bits), Expect = 1.2e-33, Sum P(4) = 1.2e-33
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 827 KQGSKEPVALRNNGDTQPAET-SIQTESHQG------IDHQFGAQNTDAQGHINSDTDVV 879
K+ +E V +N +T E + Q + +Q ID + + D +INS+ D+V
Sbjct: 379 KESVREEVGSKNIVETSVMEELNFQQDLNQSKTWKDVIDGSKCSSHEDINKNINSEQDIV 438
Query: 880 KTVQN--EPLAELNEM---DVDRGNVEV 902
+ V + E + +N + +++ VE+
Sbjct: 439 EMVSSGTEESSSMNAILAQEIENCTVEL 466
>UNIPROTKB|F1PWJ5 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000228 "nuclear chromosome"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 GO:GO:0000228 GeneTree:ENSGT00390000011606
Gene3D:1.10.10.580 InterPro:IPR023093 CTD:642636 OMA:GMQSFSL
EMBL:AAEX03013845 RefSeq:XP_851946.2 Ensembl:ENSCAFT00000010977
GeneID:609572 KEGG:cfa:609572 Uniprot:F1PWJ5
Length = 555
Score = 353 (129.3 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 75/161 (46%), Positives = 102/161 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ I+ P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKIISPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEALLK+K FR VDLP E A Y +ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEALLKMKMTFRPGLVDLPKENFEAAYSAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTM-DGMAYSTSQFG 159
+ N I H+ S E+ITL++ + + + FG
Sbjct: 119 THNVNAIDVSEQFTHNQSRPEEITLREHYGNDLLFQAGSFG 159
Score = 66 (28.3 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 1154 CPEDARVLENSGWSSRTRAVSKYLQTL-FVREPVQ-GRKVLALDHLLVGKTRKEASRMFF 1211
CP + N R + LQ L +RE + G + +L L RK+A+ F+
Sbjct: 463 CPVELESSGNEQSIDTERWNRRILQMLNSLRESNRMGMQYFSLMKLCRNSDRKQAAAKFY 522
Query: 1212 ETLVLKTKDYIHVEQARPLDNI 1233
LVLK + I + Q+ P +I
Sbjct: 523 SFLVLKKQQAIELSQSAPYADI 544
Score = 61 (26.5 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 33/159 (20%), Positives = 69/159 (43%)
Query: 711 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDI 770
A + KRK+L+D + ++ +QLT D + + AP T ++M + + D +
Sbjct: 287 AEKRKGKKRKLLIDPVKEISSKIMHKQLTCFTDTLMVLELAPPT-QRLMMWKKKGGVDTL 345
Query: 771 FNEPIFTGMSAELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQ 828
+ AEL + C + K+ K+ E+ ++ N+IE K
Sbjct: 346 LSTAAQDLTHAELKMLFTKCFLSSGFKLGRKWIQKESVREEVGSE-------NIIETSK- 397
Query: 829 GSKEPVALRNNGDTQPAETSI---QTESHQGIDHQFGAQ 864
++EP + ++ ++ + I + SH+ I+ F ++
Sbjct: 398 -TEEPNSQQDLNQSKTWKDVINGSKCSSHEDINKNFNSE 435
>MGI|MGI:3652039 [details] [associations]
symbol:Rad21l "RAD21-like (S. pombe)" species:10090 "Mus
musculus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007129 "synapsis" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
[GO:0070197 "attachment of telomeric heterochromatin to nuclear
envelope" evidence=IMP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 MGI:MGI:3652039 GO:GO:0007059
GO:GO:0007283 GO:GO:0006302 GO:GO:0000800 GO:GO:0007129
GO:GO:0007128 GO:GO:0070197 GO:GO:0030893
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 Gene3D:1.10.10.580 InterPro:IPR023093
eggNOG:NOG301899 OMA:GMQSFSL OrthoDB:EOG49S67J EMBL:HQ603828
EMBL:AB602048 EMBL:AB574185 EMBL:AL928988 IPI:IPI00752563
RefSeq:NP_001108149.1 UniGene:Mm.473683 ProteinModelPortal:A2AU37
PhosphoSite:A2AU37 PRIDE:A2AU37 Ensembl:ENSMUST00000096439
Ensembl:ENSMUST00000180195 GeneID:668929 KEGG:mmu:668929
UCSC:uc012cfx.1 CTD:668929 InParanoid:A2AU37 NextBio:435965
Genevestigator:A2AU37 Uniprot:A2AU37
Length = 552
Score = 351 (128.6 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 76/164 (46%), Positives = 104/164 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ +++ I+ P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIQKIISPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEA LK+K FR VDLP E A Y++ITLPE F DFE
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFRPGLVDLPKENFEAAYNTITLPEEFH--DFE 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDG-MAYSTSQFGLDE 162
+ + N+I + + S E+ITL++ + + FG DE
Sbjct: 119 IYNINEIDISEPLAQNQSRPEEITLREEYSNDLLFQAGSFG-DE 161
Score = 76 (31.8 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 1154 CPEDARVLENSGWSSRTRAVSKYLQTLF-----VRE-PVQGRKVLALDHLLVGKTRKEAS 1207
CP + LE+SG T A K+ Q LF +RE G + +L L RK+A+
Sbjct: 460 CPAE---LESSGSKQNTEA-EKWNQRLFQTLNVLREFNKMGMQSFSLKKLCRNSDRKQAA 515
Query: 1208 RMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMK 1243
F+ L+LK I + Q+ P +I G K
Sbjct: 516 AKFYTLLILKKHRAIELSQSVPYADIIATVGPMFYK 551
Score = 50 (22.7 bits), Expect = 5.1e-33, Sum P(3) = 5.1e-33
Identities = 31/159 (19%), Positives = 69/159 (43%)
Query: 659 SFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALK 718
S V+ + + IP L+ + + P + ++A R+R + K
Sbjct: 244 SIMVEPGNSDDQCIPEDEEINEITLLSNEDEGFTLDPIDDL-DIADRRRRK--------K 294
Query: 719 RKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTG 778
R++L+D + + +QL + D + AP T ++M + + D + +
Sbjct: 295 RRLLVDPVKEISSKAMHRQLASFMDTLMVLDLAPPT-QRLMMWKKRGGVDMLLSTATQDL 353
Query: 779 MSAELTSVH--CEI---HDLSKISISET-DKDHGSSEIA 811
++ EL + C + + L+K+++ E+ K+ G+ +IA
Sbjct: 354 INDELKMLFTKCFLSSDYKLAKLTLKESVRKEVGNQQIA 392
>RGD|1587557 [details] [associations]
symbol:Rad21l1 "RAD21-like 1 (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000800 "lateral element" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0007129 "synapsis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0030893 "meiotic cohesin complex" evidence=ISO] [GO:0070197
"attachment of telomeric heterochromatin to nuclear envelope"
evidence=ISO] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 RGD:1587557 GO:GO:0000228 GO:GO:0007128 GO:GO:0030893
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
OrthoDB:EOG49S67J IPI:IPI00763893 Ensembl:ENSRNOT00000055455
UCSC:RGD:1587557 Uniprot:D4ADQ7
Length = 550
Score = 356 (130.4 bits), Expect = 5.5e-33, Sum P(3) = 5.5e-33
Identities = 77/164 (46%), Positives = 105/164 (64%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ +++ I+ P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIQKIISPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEA LK+K FR VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFRPGLVDLPKENFEAAYNTITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMD-GMAYSTSQFGLDE 162
+ + NDI + + S E+ITL++ + + T FG DE
Sbjct: 119 IYNTNDIDISEPLAQNQSRPEEITLREEYSTDLLFQTGSFG-DE 161
Score = 71 (30.1 bits), Expect = 5.5e-33, Sum P(3) = 5.5e-33
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 1161 LENSGWSSRTRAVSKYLQTLF-----VRE-PVQGRKVLALDHLLVGKTRKEASRMFFETL 1214
LE+SG T A K+ Q LF +RE G + +L L RK+A+ F+ L
Sbjct: 462 LESSGSKQNTEA-EKWNQRLFQTLNELREFNKMGMQFFSLIKLCRNSDRKQAAAKFYTLL 520
Query: 1215 VLKTKDYIHVEQARPLDNI 1233
+LK I + Q+ P ++
Sbjct: 521 ILKKHRAIELSQSAPYADV 539
Score = 48 (22.0 bits), Expect = 5.5e-33, Sum P(3) = 5.5e-33
Identities = 17/87 (19%), Positives = 36/87 (41%)
Query: 668 NSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKVLMDDTM 727
+ +IP L+ + + P + ++A R++ + KR++L+D
Sbjct: 251 DDHYIPEDEKINEITLISNEEEGFTLDPIDGL-DIADRRKRK--------KRRLLIDPVK 301
Query: 728 VLHGDVIRQQLTNTEDIRRIRKKAPCT 754
+ + +QLT+ D + AP T
Sbjct: 302 EISSKTMHKQLTSFMDTLMVLDLAPPT 328
Score = 38 (18.4 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 268 SYDHFESEDQNSNEL 282
S DH+ ED+ NE+
Sbjct: 250 SDDHYIPEDEKINEI 264
>UNIPROTKB|Q9H4I0 [details] [associations]
symbol:RAD21L1 "Double-strand-break repair protein
rad21-like protein 1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0070197 "attachment of
telomeric heterochromatin to nuclear envelope" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007128 "meiotic prophase I" evidence=ISS] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0005634
GO:GO:0007059 GO:GO:0000228 GO:GO:0007128 EMBL:AL136531
GO:GO:0030893 EMBL:AL031665 HOGENOM:HOG000233800 HOVERGEN:HBG059956
Gene3D:1.10.10.580 InterPro:IPR023093 CTD:642636 EMBL:BC157891
EMBL:BC171911 IPI:IPI00878979 IPI:IPI00916789 RefSeq:NP_001130038.2
UniGene:Hs.713451 ProteinModelPortal:Q9H4I0 SMR:Q9H4I0
PhosphoSite:Q9H4I0 DMDM:259016327 PaxDb:Q9H4I0 PRIDE:Q9H4I0
Ensembl:ENST00000381882 Ensembl:ENST00000402452
Ensembl:ENST00000409241 GeneID:642636 KEGG:hsa:642636
UCSC:uc010gab.1 GeneCards:GC20P001206 HGNC:HGNC:16271 HPA:HPA053282
neXtProt:NX_Q9H4I0 PharmGKB:PA34171 eggNOG:NOG301899 OMA:GMQSFSL
OrthoDB:EOG49S67J NextBio:114018 ArrayExpress:Q9H4I0 Bgee:Q9H4I0
Genevestigator:Q9H4I0 Uniprot:Q9H4I0
Length = 556
Score = 350 (128.3 bits), Expect = 9.9e-33, Sum P(3) = 9.9e-33
Identities = 74/161 (45%), Positives = 101/161 (62%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY+RK YL DCSEA LK+K F VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFH--DFD 118
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDG-MAYSTSQFG 159
+ N I + + S E+ITL++ D + + FG
Sbjct: 119 TQNMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFG 159
Score = 65 (27.9 bits), Expect = 9.9e-33, Sum P(3) = 9.9e-33
Identities = 47/219 (21%), Positives = 86/219 (39%)
Query: 668 NSEFI--PXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKVLMDD 725
NSE I P IL+ + + P + ++A +++ + KR++L+D
Sbjct: 252 NSECICVPENEKMNETILLSTEEEGFTLDPID-ISDIAEKRKGK--------KRRLLIDP 302
Query: 726 TMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMSAELTS 785
L VI +QLT+ D + + AP T ++M + + + + + AEL
Sbjct: 303 IKELSSKVIHKQLTSFADTLMVLELAPPT-QRLMMWKKRGGVHTLLSTAAQDLIHAELKM 361
Query: 786 VH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQ 843
+ C + K+ K+ E+ N N++E +EP + Q
Sbjct: 362 LFTKCFLSSGFKLGRKMIQKESVREEVGNQ-------NIVETSMM--QEPNYQQELSKPQ 412
Query: 844 PAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTV 882
+ I H H+ D +INS+ D+V+ V
Sbjct: 413 TWKDVIGGSQHSS--HE------DTNKNINSEQDIVEMV 443
Score = 60 (26.2 bits), Expect = 9.9e-33, Sum P(3) = 9.9e-33
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 1161 LENSGWSSRTRAVSKYLQTLFVREPVQ-GRKVLALDHLLVGKTRKEASRMFFETLVLKTK 1219
+E W+ R + + L L RE + G + +L L RK+A+ F+ LVLK +
Sbjct: 477 IETERWNGR---ILQMLNRL--RESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQ 531
Query: 1220 DYIHVEQARPLDNI 1233
I + Q+ P +I
Sbjct: 532 LAIELSQSAPYADI 545
>UNIPROTKB|E1BTV6 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AADN02019132 IPI:IPI00818854
Ensembl:ENSGALT00000039396 Uniprot:E1BTV6
Length = 613
Score = 362 (132.5 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 113/298 (37%), Positives = 141/298 (47%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ++ ++GPL IW+AAH E+KL K + + ++ ++ I+ P IALR S HLL
Sbjct: 1 MFYMHLLVNRRGPLAKIWLAAHWEKKLTKAHIFECNLEATIKKIVSPKFTIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DCSEAL K+K AFR VDLP E A Y SITLPE F DFE
Sbjct: 61 LGVVRIYHRKTKYLLSDCSEALTKMKTAFRPGLVDLPEESCEAAYQSITLPEEFH--DFE 118
Query: 121 --LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGDGDA-SQMGXX 175
LPD N I + + S E ITL +D + FG ++ + DA +
Sbjct: 119 TTLPDLNAIDVAEHFTLNQSRAEDITLKEDYESNVLLCDRNFGERRKYEESDALRKQSFF 178
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGSVKPTTH-----WEQDNIS-ERMNEISEERTVNDGA 229
A H S A G KP H EQD E E + D
Sbjct: 179 DVSVLMSSCNLVADH--SSASVSGD-KPALHESSYCLEQDCFGDEEAGADMIEILLRDEQ 235
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKAL----ASYDHFESEDQNSNELM 283
N L LD E E P + L QE N + G+ A ASY ++E NE M
Sbjct: 236 NGLTNGILDMEE----ELPMSQDL-QE-NSTDGELAAPPPPASYTAVKTESHLMNETM 287
Score = 63 (27.2 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E WS RT + K LQ + V +L L +RKE + F+ LVL+ +
Sbjct: 534 EEIKWSKRTLQLLKTLQQHLNKSGVNS---FSLRELCRKNSRKEVAVKFYIFLVLQKQMV 590
Query: 1222 IHVEQARPLDNINIKPG 1238
+ + Q P ++ G
Sbjct: 591 VELVQCAPFADVTATAG 607
Score = 53 (23.7 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 25/86 (29%), Positives = 41/86 (47%)
Query: 255 QEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSN 314
+E + + L D E+E + N+L A +R N S+S+ NG G T + + S
Sbjct: 399 KEQDATDESSYLQELDCSEAERKTDNDLFALTAR-N--SSSETVNGFGGTLE-KIQGLSL 454
Query: 315 HDTVQCMLPEKNGYHVRDAAVKQAES 340
+ C+ + G V AA+KQ E+
Sbjct: 455 NKGSSCV---REGV-VETAAIKQDEA 476
Score = 53 (23.7 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 713 QTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 772
+ N KRK+L+D L I QL N+ AP T +I+M + + + +
Sbjct: 309 KNNKRKRKLLVDADKELSLSAIYHQLNNSVGTLVTLDLAPPT-KQIMMWKESGGVETLLS 367
Query: 773 EPIFTGMSAELTSVHCEIHDLSKIS-ISETDKDHGSSEIAN---DIGCSIA 819
+P AEL + + + S + +T K+ +++ ++ ++ CS A
Sbjct: 368 QPAQHLFHAELQTFFAKCFEREMESEVEKTRKEQDATDESSYLQELDCSEA 418
>UNIPROTKB|E5RFV8 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00980208
Ensembl:ENST00000517485 ArrayExpress:E5RFV8 Bgee:E5RFV8
Uniprot:E5RFV8
Length = 225
Score = 367 (134.2 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 79/168 (47%), Positives = 107/168 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER 163
LPD +DI + S E+IT+++ + ++ FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDR 168
>UNIPROTKB|E5RIN7 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00982810
Ensembl:ENST00000520992 ArrayExpress:E5RIN7 Bgee:E5RIN7
Uniprot:E5RIN7
Length = 228
Score = 367 (134.2 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 79/168 (47%), Positives = 107/168 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD-NDIFQGNYVDHHVSTREQITLQDTMDGMAY----STSQFGLDER 163
LPD +DI + S E+IT+++ + ++ FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDR 168
>UNIPROTKB|E1C938 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000228 "nuclear chromosome" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AADN02019132 IPI:IPI00584752
Ensembl:ENSGALT00000009982 Uniprot:E1C938
Length = 602
Score = 362 (132.5 bits), Expect = 4.6e-32, Sum P(4) = 4.6e-32
Identities = 113/298 (37%), Positives = 141/298 (47%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ++ ++GPL IW+AAH E+KL K + + ++ ++ I+ P IALR S HLL
Sbjct: 1 MFYMHLLVNRRGPLAKIWLAAHWEKKLTKAHIFECNLEATIKKIVSPKFTIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DCSEAL K+K AFR VDLP E A Y SITLPE F DFE
Sbjct: 61 LGVVRIYHRKTKYLLSDCSEALTKMKTAFRPGLVDLPEESCEAAYQSITLPEEFH--DFE 118
Query: 121 --LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGDGDA-SQMGXX 175
LPD N I + + S E ITL +D + FG ++ + DA +
Sbjct: 119 TTLPDLNAIDVAEHFTLNQSRAEDITLKEDYESNVLLCDRNFGERRKYEESDALRKQSFF 178
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGSVKPTTH-----WEQDNIS-ERMNEISEERTVNDGA 229
A H S A G KP H EQD E E + D
Sbjct: 179 DVSVLMSSCNLVADH--SSASVSGD-KPALHESSYCLEQDCFGDEEAGADMIEILLRDEQ 235
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKAL----ASYDHFESEDQNSNELM 283
N L LD E E P + L QE N + G+ A ASY ++E NE M
Sbjct: 236 NGLTNGILDMEE----ELPMSQDL-QE-NSTDGELAAPPPPASYTAVKTESHLMNETM 287
Score = 63 (27.2 bits), Expect = 4.6e-32, Sum P(4) = 4.6e-32
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E WS RT + K LQ + V +L L +RKE + F+ LVL+ +
Sbjct: 523 EEIKWSKRTLQLLKTLQQHLNKSGVNS---FSLRELCRKNSRKEVAVKFYIFLVLQKQMV 579
Query: 1222 IHVEQARPLDNINIKPG 1238
+ + Q P ++ G
Sbjct: 580 VELVQCAPFADVTATAG 596
Score = 46 (21.3 bits), Expect = 4.6e-32, Sum P(4) = 4.6e-32
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 713 QTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 772
+ N KRK+L+D L I QL N+ AP T +I+M + + + +
Sbjct: 309 KNNKRKRKLLVDADKELSLSAIYHQLNNSVGTLVTLDLAPPT-KQIMMWKESGGVETLLS 367
Query: 773 EPIFTGMSAELTSVHCEIHDLSKISI 798
+P AEL + + + + ++
Sbjct: 368 QPAQHLFHAELQTFFAKCFERGRFAM 393
Score = 39 (18.8 bits), Expect = 4.6e-32, Sum P(4) = 4.6e-32
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 876 TDVVKTVQNEPLAELNEMDVDRGNVE-----VAEEASCSVNHGFGTSSQTDVASAE---V 927
T+++ T ++ L EL+ + +R A +S +GFG + Q + A +E +
Sbjct: 414 TEMLITDESSYLQELDCSEAERKTDNDLFALTARNSSSETVNGFGGTLQDEAAFSESSML 473
Query: 928 CNQPTGDKTNTVDASLLVDTVC-LTPEPTVDAQP 960
N G + A + VC L + + A+P
Sbjct: 474 LNNSMGREAPVQHAE--ITHVCILKADSSHTAEP 505
>UNIPROTKB|E1B9J3 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070197 "attachment of telomeric heterochromatin to
nuclear envelope" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007129 "synapsis" evidence=IEA] [GO:0007128 "meiotic prophase
I" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0000228 GO:GO:0007128 GO:GO:0030893
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
OMA:GMQSFSL EMBL:DAAA02036365 IPI:IPI00704766
Ensembl:ENSBTAT00000001812 Uniprot:E1B9J3
Length = 557
Score = 346 (126.9 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 75/161 (46%), Positives = 102/161 (63%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ +++K+GPL IW+AAH E+KL K V + ++ ++++ IL P V IALR S HLL
Sbjct: 1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETF-DLDDF 119
LGVVRIY+RK YL DCSEALLK+K FR VDLP E A Y +ITLPE F D D
Sbjct: 61 LGVVRIYNRKAKYLLADCSEALLKMKMTFRPGLVDLPKESFEAAYSTITLPEEFHDFDTQ 120
Query: 120 ELPDNDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFG 159
+ D+ + + + S E+ITL +D + + + FG
Sbjct: 121 TMNAIDVSECSIQNQ--SKPEEITLREDYGNDLLFHAGSFG 159
Score = 68 (29.0 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 711 ASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDI 770
A + RK+L+D + ++ +QLT+ D + + AP T + LM+ Q DI
Sbjct: 289 AEKRKGKNRKLLIDPVKEISSKIMHRQLTSFTDTLMVLELAPPT--QRLMMWKQKGGADI 346
Query: 771 FNEPIFTGMS-AELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK 827
++ AEL + C + K+ K+ + ++G + N++E
Sbjct: 347 LLSTAAQDLTHAELKMLFTKCFVSSGFKLGRKLIQKE----SVKEEMG---SKNILETSM 399
Query: 828 QGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQN 884
+EP L+ +QP T+ + H+ NT+ +INSD D+V+ V +
Sbjct: 400 M--EEPNFLQEL--SQPKTWKEVTDGSKCSSHE----NTNK--NINSDQDIVEMVSS 446
Score = 52 (23.4 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 1188 GRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDNI 1233
G + +L L RK+ + F+ L+LK I + Q+ P +I
Sbjct: 501 GMQYFSLMKLCRNSDRKQTAAKFYSFLMLKKHQAIELSQSAPYADI 546
Score = 38 (18.4 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 521 SSERSKMNQASVDVQGEECYLTDVMQSE 548
S E KM++ +V + EE L + S+
Sbjct: 258 SPENEKMDETTVSKEEEEFILDPIDTSD 285
>UNIPROTKB|E1BTU9 [details] [associations]
symbol:RAD21L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000800 "lateral element" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0007128
"meiotic prophase I" evidence=IEA] [GO:0007129 "synapsis"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=IEA] [GO:0070197
"attachment of telomeric heterochromatin to nuclear envelope"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 GO:GO:0000228 GO:GO:0007128 GO:GO:0030893
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AADN02019132 IPI:IPI00819464 Ensembl:ENSGALT00000039400
OMA:EITHVCI Uniprot:E1BTU9
Length = 630
Score = 357 (130.7 bits), Expect = 8.7e-32, Sum P(3) = 8.7e-32
Identities = 112/300 (37%), Positives = 143/300 (47%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY ++ ++GPL IW+AAH E+KL K + + ++ ++ I+ P IALR S HLL
Sbjct: 1 MFYMHLLVNRRGPLAKIWLAAHWEKKLTKAHIFECNLEATIKKIVSPKFTIALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DCSEAL K+K AFR VDLP E A Y SITLPE F DFE
Sbjct: 61 LGVVRIYHRKTKYLLSDCSEALTKMKTAFRPGLVDLPEESCEAAYQSITLPEEFH--DFE 118
Query: 121 --LPD-NDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGDGDA-SQMGXX 175
LPD N I + + S E ITL +D + FG ++ + DA +
Sbjct: 119 TTLPDLNAIDVAEHFTLNQSRAEDITLKEDYESNVLLCDRNFGERRKYEESDALRKQSFF 178
Query: 176 XXXXXXXXKGTAAGHGVSDADPQGSVKPTTH-----WEQDNIS-ERMNEISEERTVNDGA 229
A H S A G KP H EQD E E + D
Sbjct: 179 DVSVLMSSCNLVADH--SSASVSGD-KPALHESSYCLEQDCFGDEEAGADMIEILLRDEQ 235
Query: 230 NQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRV 289
N L LD E E P + L QE N + G+ A A SE +++ + TES +
Sbjct: 236 NGLTNGILDMEE----ELPMSQDL-QE-NSTDGELA-APPPPASSEFNHADTAVKTESHL 288
Score = 63 (27.2 bits), Expect = 8.7e-32, Sum P(3) = 8.7e-32
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1162 ENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDY 1221
E WS RT + K LQ + V +L L +RKE + F+ LVL+ +
Sbjct: 551 EEIKWSKRTLQLLKTLQQHLNKSGVNS---FSLRELCRKNSRKEVAVKFYIFLVLQKQMV 607
Query: 1222 IHVEQARPLDNINIKPG 1238
+ + Q P ++ G
Sbjct: 608 VELVQCAPFADVTATAG 624
Score = 53 (23.7 bits), Expect = 8.7e-32, Sum P(3) = 8.7e-32
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 255 QEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKD-- 312
+E + + L D E+E + N+L A +R N S+S+ NG G T + L +
Sbjct: 405 KEQDATDESSYLQELDCSEAERKTDNDLFALTAR-N--SSSETVNGFGGTLE-SLFRSIL 460
Query: 313 SNHDTVQCMLPEKNGYHVRDAAVKQA 338
++ + +Q + K VR+ V+ A
Sbjct: 461 ADPEKIQGLSLNKGSSCVREGVVETA 486
Score = 53 (23.7 bits), Expect = 8.7e-32, Sum P(3) = 8.7e-32
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 713 QTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 772
+ N KRK+L+D L I QL N+ AP T +I+M + + + +
Sbjct: 315 KNNKRKRKLLVDADKELSLSAIYHQLNNSVGTLVTLDLAPPT-KQIMMWKESGGVETLLS 373
Query: 773 EPIFTGMSAELTSVHCEIHDLSKIS-ISETDKDHGSSEIAN---DIGCSIA 819
+P AEL + + + S + +T K+ +++ ++ ++ CS A
Sbjct: 374 QPAQHLFHAELQTFFAKCFEREMESEVEKTRKEQDATDESSYLQELDCSEA 424
Score = 38 (18.4 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 6/10 (60%), Positives = 10/10 (100%)
Query: 845 AETSIQTESH 854
A+T+++TESH
Sbjct: 278 ADTAVKTESH 287
>ZFIN|ZDB-GENE-061103-505 [details] [associations]
symbol:rad21l1 "RAD21-like 1 (S. pombe)"
species:7955 "Danio rerio" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
ZFIN:ZDB-GENE-061103-505 GO:GO:0000228 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 HOGENOM:HOG000233800
HOVERGEN:HBG059956 Gene3D:1.10.10.580 InterPro:IPR023093 CTD:642636
EMBL:CU467960 EMBL:BC125933 IPI:IPI00771566 RefSeq:NP_001073519.1
UniGene:Dr.84879 Ensembl:ENSDART00000079631 GeneID:571082
KEGG:dre:571082 InParanoid:A0JMM5 OMA:TLKEDFG OrthoDB:EOG4GB773
NextBio:20890409 Uniprot:A0JMM5
Length = 546
Score = 334 (122.6 bits), Expect = 7.7e-31, Sum P(4) = 7.7e-31
Identities = 75/163 (46%), Positives = 97/163 (59%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+Q +K+G L IW+AAH E+K+ K V + D+ ++ IL P + I LR S HLL
Sbjct: 1 MFYAQLFTSKRGTLAKIWLAAHWEKKITKAHVFECDLETTIKEILSPQIKIGLRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIYSRK YL DCS+AL+KIK AFR DLP + A +ITLPE F D +
Sbjct: 61 LGVVRIYSRKTRYLLADCSDALVKIKVAFRPGQTDLPDDAMEATLKTITLPEDFTDFDSQ 120
Query: 121 LPD-NDIFQGNYVDHHVSTR---EQITLQDTMDGMAYSTSQFG 159
LPD N I + VDH + E ITL++ + S + G
Sbjct: 121 LPDLNTI---DVVDHFSLNQCRTEDITLKENFGNLFLSLERIG 160
Score = 62 (26.9 bits), Expect = 7.7e-31, Sum P(4) = 7.7e-31
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 1191 VLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPG 1238
V +L L +R + +FF LVL+ + ++++ Q+ P +I PG
Sbjct: 493 VYSLHALCESGSRSYVAALFFCMLVLRKQQFLNLHQSAPYSDIIATPG 540
Score = 59 (25.8 bits), Expect = 7.7e-31, Sum P(4) = 7.7e-31
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 710 SASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
SA + KRK+++D + L IR QL + DI + AP T
Sbjct: 268 SAKKRKVRKRKLVIDRSKQLTNSAIRDQLADCSDILSPLEIAPPT 312
Score = 41 (19.5 bits), Expect = 7.7e-31, Sum P(4) = 7.7e-31
Identities = 15/83 (18%), Positives = 37/83 (44%)
Query: 927 VCN-QPTGDKTNTVDASLLVD------TVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDT 979
VC+ +P +T+++ L V + P+V+ + + T + ++ +ED
Sbjct: 411 VCHPEPPPSWNSTIESRLEVSYPEPQSEISTLSHPSVEMRETPLVTKTQSVLGSQDLEDR 470
Query: 980 EVIDRNIENIVAVETEAKGTDGV 1002
+ R + + A++++ D V
Sbjct: 471 RMTSRAHDLLQALKSQDSSPDAV 493
>WB|WBGene00000591 [details] [associations]
symbol:coh-1 species:6239 "Caenorhabditis elegans"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0007130
"synaptonemal complex assembly" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=ISS]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0003684 GO:GO:0040011 GO:GO:0045132 GO:GO:0000228
GO:GO:0007130 eggNOG:NOG249424 GeneTree:ENSGT00390000011606
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:FO080256
PIR:T16582 RefSeq:NP_509262.1 ProteinModelPortal:Q21306 SMR:Q21306
STRING:Q21306 PaxDb:Q21306 EnsemblMetazoa:K08A8.3 GeneID:181003
KEGG:cel:CELE_K08A8.3 UCSC:K08A8.3 CTD:181003 WormBase:K08A8.3
HOGENOM:HOG000020951 InParanoid:Q21306 OMA:DIEQKEP NextBio:911936
Uniprot:Q21306
Length = 652
Score = 312 (114.9 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 71/168 (42%), Positives = 100/168 (59%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+KKGPL +W+AAH E+KL K Q+ +TD+ +V+ I+ P +ALR + HLL
Sbjct: 56 MFYADFVLSKKGPLSKVWLAAHWEKKLSKAQIFETDVDEAVNEIMQPSQKLALRTTGHLL 115
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETF-DLDDF 119
LG+ R+YSRK YL DC+EA LKIK FRS A+D P P SI + + D D
Sbjct: 116 LGICRVYSRKTKYLLADCNEAFLKIKLVFRSGALDQP--NPVLPTFSIQ--DIYGDFGDN 171
Query: 120 ELPDNDIFQGNYVDHHVSTREQITL-QDTMDGMAYSTSQFGLDERFGD 166
LP+ D + N+ S + ITL +D Y+ + D+ FG+
Sbjct: 172 VLPEFDEEELNHAPICQSRLDDITLKEDIPQKFTYNYGEPLEDDDFGE 219
Score = 103 (41.3 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 1156 EDARVLENSGWSSRTRAVSKYLQTLFVREPVQGRKVLALDHLLV-GKTRKEASRMFFETL 1214
E+ E++ WS RT A+ LQ + + Q +V LD +L G +RK A+ F+ L
Sbjct: 565 EEPETDEDNRWSKRTHAL---LQNIATKLENQNGQV-ELDEMLKKGTSRKVAAAKFYSLL 620
Query: 1215 VLKTKDYIHVEQARPLDNINIKPGAKL 1241
LK I +EQ P +I IK G +
Sbjct: 621 CLKKNQCIDIEQKEPYGDIMIKAGPNI 647
Score = 50 (22.7 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 701 EVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILM 760
E ++KRA Q N KR+V DD ++ G+ ++ + + DI AP +++M
Sbjct: 365 ERQAQKRAMQKEQ-NMRKRRV--DDVKMITGEEMKGNMADFSDILTRLDLAP-PSRKLMM 420
Query: 761 IQMQFLEDDIFNEPIFTGMS 780
+ + + + + P G S
Sbjct: 421 GKKRSHAEYMHHNPGMIGFS 440
Score = 38 (18.4 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 635 KLNSGKKRSYTE 646
KL GKKRS+ E
Sbjct: 417 KLMMGKKRSHAE 428
>UNIPROTKB|E5RJK5 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00984166
Ensembl:ENST00000519837 ArrayExpress:E5RJK5 Bgee:E5RJK5
Uniprot:E5RJK5
Length = 124
Score = 345 (126.5 bits), Expect = 4.5e-30, P = 4.5e-30
Identities = 69/123 (56%), Positives = 86/123 (69%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F D
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120
Query: 121 LPD 123
LPD
Sbjct: 121 LPD 123
>WB|WBGene00004737 [details] [associations]
symbol:scc-1 species:6239 "Caenorhabditis elegans"
[GO:0000228 "nuclear chromosome" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040002 "collagen
and cuticulin-based cuticle development" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0007130 "synaptonemal complex assembly"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003684
"damaged DNA binding" evidence=ISS] [GO:0008278 "cohesin complex"
evidence=IPI] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0003684 GO:GO:0040011 GO:GO:0040035
GO:GO:0045132 GO:GO:0040002 EMBL:FO081114 GO:GO:0000228
GO:GO:0007130 GO:GO:0008278 eggNOG:NOG249424
GeneTree:ENSGT00390000011606 Gene3D:1.10.10.580 InterPro:IPR023093
PIR:G88130 RefSeq:NP_494836.1 ProteinModelPortal:Q19325 SMR:Q19325
DIP:DIP-24317N IntAct:Q19325 MINT:MINT-226784 STRING:Q19325
PaxDb:Q19325 EnsemblMetazoa:F10G7.4 GeneID:173808
KEGG:cel:CELE_F10G7.4 UCSC:F10G7.4 CTD:173808 WormBase:F10G7.4
HOGENOM:HOG000017446 InParanoid:Q19325 NextBio:881199
Uniprot:Q19325
Length = 645
Score = 301 (111.0 bits), Expect = 5.5e-30, Sum P(5) = 5.5e-30
Identities = 75/182 (41%), Positives = 110/182 (60%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+QF+LAKKGPL +W+AAH E+KL K Q+ +TD+ +++ ++ P V +ALR HLL
Sbjct: 1 MFYAQFVLAKKGPLAKVWLAAHWEKKLTKAQIFETDVPQAIEEVIRPKVKMALRTVGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFR---STAVDLPP----EESTAPY---HSITL 110
LG+VRIYS+K YL D +EA K+K FR S VD+P EE + + ++IT+
Sbjct: 61 LGIVRIYSKKTRYLLADTNEAYQKMKINFRNGFSFEVDIPENAEIEEDFSNFIDKYNITV 120
Query: 111 PETFDLDDFELPDNDIFQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERF-GDGDA 169
PE D D E + N VS RE IT+++T++ ++ +F +D F G GD
Sbjct: 121 PEFHDADYNE----QLIMAN-----VSRREDITMKETVN---FNV-EFNIDADFDGFGDE 167
Query: 170 SQ 171
+
Sbjct: 168 GE 169
Score = 82 (33.9 bits), Expect = 5.5e-30, Sum P(5) = 5.5e-30
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 1201 KTRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMKA 1244
K RK+A+ F+ L L I V+Q+ P I I+PGA +A
Sbjct: 575 KNRKQAAEQFYSLLTLAKSQAISVDQSEPYGEIVIRPGANFKEA 618
Score = 63 (27.2 bits), Expect = 5.5e-30, Sum P(5) = 5.5e-30
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 199 GSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLV 254
GSV+P + E + E+ +R V ++ R+ DA+ + ++E P+ P L+
Sbjct: 178 GSVEPLSLRPTPQ-PESLMEVERDRDVAANGTEISRI--DADSVIFSEGPTRPNLI 230
Score = 54 (24.1 bits), Expect = 5.5e-30, Sum P(5) = 5.5e-30
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 719 RKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCT 754
RK+++D ++ D R+Q + D R+ + AP T
Sbjct: 329 RKLIVDAETMISNDAFREQQEDFSDTMRVVEMAPPT 364
Score = 42 (19.8 bits), Expect = 5.5e-30, Sum P(5) = 5.5e-30
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1113 DLRSPMDDGRMEIEEVTIGNDTEF 1136
D+R DD R +E+ G++ +F
Sbjct: 457 DVRMDDDDDRQPAQEMDFGDNFDF 480
>UNIPROTKB|E5RJW1 [details] [associations]
symbol:RAD21 "Double-strand-break repair protein rad21
homolog" species:9606 "Homo sapiens" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] InterPro:IPR006910 Pfam:PF04825
HGNC:HGNC:9811 ChiTaRS:RAD21 EMBL:AC087350 IPI:IPI00981513
Ensembl:ENST00000522699 ArrayExpress:E5RJW1 Bgee:E5RJW1
Uniprot:E5RJW1
Length = 120
Score = 341 (125.1 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 68/122 (55%), Positives = 86/122 (70%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
MFY+ F+L+K+GPL IW+AAH ++KL K V + ++ SV+SI+ P V +ALR S HLL
Sbjct: 1 MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60
Query: 61 LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
LGVVRIY RK YL DC+EA +KIK AFR VDLP E A Y++ITLPE F DF+
Sbjct: 61 LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFH--DFD 118
Query: 121 LP 122
P
Sbjct: 119 QP 120
>ASPGD|ASPL0000069046 [details] [associations]
symbol:AN7465 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0008608 "attachment of
spindle microtubules to kinetochore" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030892 "mitotic cohesin complex"
evidence=IEA] InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824
Pfam:PF04825 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0000228
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
OrthoDB:EOG4C2MKJ RefSeq:XP_680734.1 ProteinModelPortal:Q5AW65
STRING:Q5AW65 EnsemblFungi:CADANIAT00000558 GeneID:2869516
KEGG:ani:AN7465.2 HOGENOM:HOG000162683 OMA:DATKMFF Uniprot:Q5AW65
Length = 584
Score = 288 (106.4 bits), Expect = 7.9e-27, Sum P(3) = 7.9e-27
Identities = 66/129 (51%), Positives = 85/129 (65%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP-DVPIALRLSSHL 59
MFYS+ +L+K GPL +W++A+LERKL K+ + +DI SV +I+ P+ALRLS L
Sbjct: 1 MFYSETLLSKTGPLARVWLSANLERKLSKSHILQSDIESSVSAIVDQGQAPMALRLSGQL 60
Query: 60 LLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV-DLPPEESTAPYHSITLPETF-DLD 117
LLGVVRIYSRK YL DDC+EAL+KIK AFR T DL AP ITLP+ + D
Sbjct: 61 LLGVVRIYSRKARYLLDDCNEALMKIKMAFRLTNNNDLTTSAVVAP-GGITLPDVLTEAD 119
Query: 118 DFELPDNDI 126
F D+ +
Sbjct: 120 LFMNLDSSL 128
Score = 86 (35.3 bits), Expect = 7.9e-27, Sum P(3) = 7.9e-27
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 1189 RKVLALDHLLVGK--TRKEASRMFFETLVLKTKDYIHVEQ 1226
+K + LL K TR +A++MFFE LVL TKD + VEQ
Sbjct: 508 KKAVKFQDLLPEKKATRADATKMFFEVLVLATKDAVQVEQ 547
Score = 56 (24.8 bits), Expect = 7.9e-27, Sum P(3) = 7.9e-27
Identities = 31/135 (22%), Positives = 56/135 (41%)
Query: 1003 LVEEGK-VGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNE 1061
L EGK G S++ G+ + D + A +QE LE G L D + L +
Sbjct: 136 LEPEGKRPGPSMDFGSQLFPDTGLRRSA--SQEPALLEDPGDLQLNLGLDDETNLSFSH- 192
Query: 1062 DGPLAGDWGSN-GKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKSQVDLRSPMDD 1120
D+ G+D + E+ D+ +++G +N+ DD +D
Sbjct: 193 ------DFSMEVGRDAPAPRPMEEDNFSDAGKVIDVGDLGLNLGEDDTPLDAVNFDANED 246
Query: 1121 GRMEIEE-VTIGNDT 1134
+ ++E + +G+DT
Sbjct: 247 NFLPLDEPMDLGDDT 261
Score = 51 (23.0 bits), Expect = 5.3e-26, Sum P(4) = 5.3e-26
Identities = 28/120 (23%), Positives = 46/120 (38%)
Query: 813 DIGCSIAPNVIEG-GKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQ---NTDA 868
D G + P+ G + S+EP L + GD Q + E++ H F + + A
Sbjct: 148 DFGSQLFPDT--GLRRSASQEPALLEDPGDLQ-LNLGLDDETNLSFSHDFSMEVGRDAPA 204
Query: 869 QGHINSD--TDVVKTVQNEPLA-ELNEMD--VDRGNVEVAEEASCSVNHGFGTSSQTDVA 923
+ D +D K + L L E D +D N + E+ ++ T VA
Sbjct: 205 PRPMEEDNFSDAGKVIDVGDLGLNLGEDDTPLDAVNFDANEDNFLPLDEPMDLGDDTVVA 264
Score = 47 (21.6 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 890 LNEMDVDRGN---VEVAEEASCSVNHGFGTSS 918
+++MDVD +E+ EEA V+ G G S
Sbjct: 411 ISDMDVDAAAAPALEIEEEAIVPVDEGVGMES 442
Score = 42 (19.8 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 515 LGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSV-CGDIQEDNGTLDEPLD 573
LG+D + S + S++V G + M+ + +G + GD+ + G D PLD
Sbjct: 180 LGLD-DETNLSFSHDFSMEV-GRDAPAPRPMEEDNFSDAGKVIDVGDLGLNLGEDDTPLD 237
Query: 574 NATASNNE 581
NE
Sbjct: 238 AVNFDANE 245
Score = 37 (18.1 bits), Expect = 5.3e-26, Sum P(4) = 5.3e-26
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 966 SVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGV 1011
+V K K D+ + D +++ A E + V V+EG VG+
Sbjct: 396 TVRKAGELKRKRDSGISDMDVDAAAAPALEIEEEAIVPVDEG-VGM 440
Score = 37 (18.1 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 191 GVSDADPQGSVKPTTHWEQDNISERMNEISEERTVN 226
G+SD D + P E++ I + E T++
Sbjct: 410 GISDMDVDAAAAPALEIEEEAIVPVDEGVGMESTLH 445
>POMBASE|SPCC338.17c [details] [associations]
symbol:rad21 "mitotic cohesin complex, non-SMC subunit
Rad21 (kleisin)" species:4896 "Schizosaccharomyces pombe"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IGI] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008608 "attachment of spindle
microtubules to kinetochore" evidence=IMP] [GO:0030892 "mitotic
cohesin complex" evidence=IDA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 PomBase:SPCC338.17c
GO:GO:0000775 GO:GO:0051301 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0000724 GO:GO:0000794 GO:GO:0008608 GO:GO:0007064
GO:GO:0030892 eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:M96437 PIR:S35547 RefSeq:NP_588151.1
ProteinModelPortal:P30776 IntAct:P30776 STRING:P30776
EnsemblFungi:SPCC338.17c.1 GeneID:2539447 KEGG:spo:SPCC338.17c
OMA:VEACNTI OrthoDB:EOG4C2MKJ NextBio:20800609 PMAP-CutDB:P30776
Uniprot:P30776
Length = 628
Score = 286 (105.7 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 124/470 (26%), Positives = 199/470 (42%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDV-PIALRLSSHL 59
MFYS+ IL+KKGPL +W+AAH E+KL K Q T I SV +I+ + P+ALRLS L
Sbjct: 1 MFYSEAILSKKGPLAKVWLAAHWEKKLSKVQTLHTSIEQSVHAIVTEETAPMALRLSGQL 60
Query: 60 LLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDL-PP---------EESTAPYHSIT 109
+LGVVRIYSRK YL +DC+EAL+++K +F+ VD+ P +++ ++T
Sbjct: 61 MLGVVRIYSRKARYLLEDCTEALMRLKMSFQPGQVDMIEPATALQSLKGKDAVTQSANLT 120
Query: 110 LPETFDLDDFELPDNDI-FQGNYVDHHVSTREQITLQDTMDGMAYSTSQFGLDERFGDGD 168
LPET D +PD+ FQ + + +R TL+ + + S+S F
Sbjct: 121 LPETITEFDLLVPDSTFDFQWSQL-LRTPSRSSNTLE--LHSLPISSSP-----SFPSSQ 172
Query: 169 AS-QMGXXXXXXXXXXKGTAAGHGVSDAD---P---QGSVKP-TTHWEQDNISERMNEIS 220
S + G G + H +D P G+ P + H DN S+ E+
Sbjct: 173 LSIEAGRNAQVESGFSLGESFAHVGNDMQFHLPISNSGAATPRSVH--SDNQSQISIEVG 230
Query: 221 EERTVNDGANQLERVG--LDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQN 278
+ + +G + P STP ++ S + LA D D
Sbjct: 231 RDAPAAAATDLSGIIGPQMTKSPASSVTHFSTPSMLPIGGTSLDDELLAPVDDLNL-DLG 289
Query: 279 SNELMATESRVNDLS---NSDCHNGDGHTADWPLHKDSNHDTVQCMLPEKNGYHVRDAAV 335
++L+ E N + + H + DS+ + + G V A
Sbjct: 290 LDDLLGDEQGANAPAIEADEQAETSSIHLPSDIMEDDSSRPAAAGV---EEGQVVESATA 346
Query: 336 KQAESLG--ESVKSMPFVPDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAAS 393
Q E + ++V+ + D + L + K L + + S +S A+
Sbjct: 347 PQQEKINPQKTVRRQRAIID----PVTELSSKQMKKQLADTSSITSPLCLNTSSIVFNAT 402
Query: 394 LNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQAS--NKKKSHNDAEV 441
+N T N + N V+E AD++ + K+K+ + EV
Sbjct: 403 VNFTR----NGKFNTSIFSSNLNPKVNELLQADFKQAILRKRKNESPEEV 448
Score = 83 (34.3 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 1187 QGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPLDN 1232
+G KV + L G R+EA ++FF+ LVL TKD I V+Q + N
Sbjct: 569 EGEKV-SFQTLSAGCNREEAVQLFFDVLVLATKDVISVKQDVAIQN 613
Score = 42 (19.8 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 951 TPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGK 1008
+PE A+ TS + A+ ++ E+ + NI + V+ EG+
Sbjct: 444 SPEEVEPAKHQRTDTSTENQETAEVLDPEEIAAAELANITEAAIATLPQETVVQPEGE 501
>UNIPROTKB|G4MR40 [details] [associations]
symbol:MGG_09891 "Double-strand-break repair protein rad21"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 EMBL:CM001231 GO:GO:0043581 GO:GO:0000228
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
RefSeq:XP_003709984.1 EnsemblFungi:MGG_09891T0 GeneID:2680935
KEGG:mgr:MGG_09891 Uniprot:G4MR40
Length = 625
Score = 275 (101.9 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 74/175 (42%), Positives = 100/175 (57%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP--DVPIALRLSSH 58
MFYS +L GPL +W+AA++ERKL K + +++ SV+ I+ P + P+ALRLS
Sbjct: 1 MFYSDTLLRTTGPLSRVWLAANMERKLSKAHILQSNLRHSVEQIIQPSEEAPLALRLSGQ 60
Query: 59 LLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV-DLPPEESTAPYHSITLPETF--- 114
LLLGVVRIYSRK YL +DC+EAL+KIK AFRS+ DLP S+ L +
Sbjct: 61 LLLGVVRIYSRKARYLLEDCNEALMKIKMAFRSSGNNDLPTNLHLPNRESLMLQDRITPH 120
Query: 115 -DLDDFE----LPDNDIFQGNYVDH--HVSTREQITLQDTMDGMAYSTSQFGLDE 162
+LDD L +D+ + VS RE I LQ+ ++ SQF DE
Sbjct: 121 DNLDDLPPEPTLNFDDLTTSQQLGRKGRVSNRE-INLQED-----FNNSQFLQDE 169
Score = 78 (32.5 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 1202 TRKEASRMFFETLVLKTKDYIHVEQ 1226
T+ +A++MFFE LVL TKD I VEQ
Sbjct: 550 TKADATKMFFECLVLATKDAIKVEQ 574
>TAIR|locus:2169667 [details] [associations]
symbol:SYN1 "SYNAPTIC 1" species:3702 "Arabidopsis
thaliana" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISM] [GO:0007062 "sister chromatid cohesion"
evidence=RCA;IMP] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0008278 "cohesin complex" evidence=ISS]
[GO:0005694 "chromosome" evidence=IDA] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0051455 "attachment of spindle
microtubules to kinetochore involved in homologous chromosome
segregation" evidence=IMP] [GO:0051754 "meiotic sister chromatid
cohesion, centromeric" evidence=IMP] [GO:0006302 "double-strand
break repair" evidence=RCA] [GO:0006312 "mitotic recombination"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0007131
"reciprocal meiotic recombination" evidence=RCA] [GO:0042138
"meiotic DNA double-strand break formation" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051754 EMBL:AB005241
GO:GO:0006325 GO:GO:0000228 GO:GO:0051455 GO:GO:0008278
GO:GO:0010032 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
EMBL:AF080620 EMBL:AF080619 EMBL:AJ238306 IPI:IPI00517990
IPI:IPI00540220 PIR:T52571 RefSeq:NP_196168.1 RefSeq:NP_850773.1
UniGene:At.48986 UniGene:At.690 ProteinModelPortal:Q9S7T7
SMR:Q9S7T7 STRING:Q9S7T7 PRIDE:Q9S7T7 EnsemblPlants:AT5G05490.1
GeneID:830432 KEGG:ath:AT5G05490 GeneFarm:1768 TAIR:At5g05490
eggNOG:NOG252146 HOGENOM:HOG000083970 InParanoid:Q9S7T7 OMA:RLSGILM
PhylomeDB:Q9S7T7 ProtClustDB:CLSN2686639 Genevestigator:Q9S7T7
Uniprot:Q9S7T7
Length = 627
Score = 231 (86.4 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 57/133 (42%), Positives = 80/133 (60%)
Query: 7 ILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRI 66
+LA+K PLG IW+AA L K+ + ++ DI + IL P VP+ALRLS L+ GVV +
Sbjct: 17 LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76
Query: 67 YSRKVNYLFDDCSEALLKIKQAFRSTAVD----LPPEESTAPYHSITLPETFDLD--DFE 120
Y RKV LFDD + L++I A+R+ +V LP ++ A ++TLPE + D DFE
Sbjct: 77 YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136
Query: 121 LPDNDIFQGNYVD 133
N GNY+D
Sbjct: 137 QTRNVPKFGNYMD 149
Score = 97 (39.2 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 1170 TRAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARP 1229
T ++ +L+T F E +V +L+ L VG R A+++FF++ VL T+ I V QA P
Sbjct: 558 TDSIKSHLKTHF--ETPGAPQVESLNKLAVGMDRNAAAKLFFQSCVLATRGVIKVNQAEP 615
Query: 1230 LDNINIKPGAKL 1241
+I I G +
Sbjct: 616 YGDILIARGPNM 627
Score = 41 (19.5 bits), Expect = 8.1e-20, Sum P(3) = 8.1e-20
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 323 PEKNGYHVRDAAVKQAESLGESVKSMPFVPDG-SEGTINPLDGSKR 367
PE D V S G+ V+SMP P +IN ++ S +
Sbjct: 443 PETINRQAADINVTPFYS-GDDVRSMPSTPSARGAASINNIEISSK 487
>DICTYBASE|DDB_G0276977 [details] [associations]
symbol:rad21 "cohesin subunit" species:44689
"Dictyostelium discoideum" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
dictyBase:DDB_G0276977 EMBL:AAFI02000019 GO:GO:0000228
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
RefSeq:XP_642955.1 ProteinModelPortal:Q550H7 PRIDE:Q550H7
GeneID:8620824 KEGG:ddi:DDB_G0276977 InParanoid:Q550H7
Uniprot:Q550H7
Length = 821
Score = 242 (90.2 bits), Expect = 2.0e-17, Sum P(5) = 2.0e-17
Identities = 53/115 (46%), Positives = 76/115 (66%)
Query: 1 MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSV--------------DSILF 46
MF+SQ +LAK+G LG IW+A H ++KL KN V T+I SV ++IL
Sbjct: 1 MFFSQIVLAKRGALGKIWLAGHWDKKLAKNVVFKTNIPKSVKINKEINKKKKKKIETILN 60
Query: 47 PDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTA-VDLPPEE 100
P P+ALR++SHLLLGV RI+S+K YL DC+EA++K+K ++ + +DLP E+
Sbjct: 61 PHSPMALRMTSHLLLGVARIFSKKAKYLLSDCTEAVIKLKGLSKTISKIDLPSEQ 115
Score = 65 (27.9 bits), Expect = 2.0e-17, Sum P(5) = 2.0e-17
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 1202 TRKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKLMK 1243
TR A+ F+E LVLKTK +++EQ P ++ P K+ K
Sbjct: 765 TRLVAACYFYELLVLKTKVLVNLEQ--PENDTETYPDIKISK 804
Score = 51 (23.0 bits), Expect = 2.0e-17, Sum P(5) = 2.0e-17
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 813 DIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQ 860
D G ++ P GG + +R+ D PA T +T HQ
Sbjct: 286 DEGMNMPPQDDGGGDDQQHVDIGMRHGDDDYPAYTGPETHDDDQQPHQ 333
Score = 39 (18.8 bits), Expect = 2.0e-17, Sum P(5) = 2.0e-17
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 1014 ENGADVETDRSVLTDAVNTQEGVSLET---GGYNDLAAANGDNSRLEVR 1059
ENG + +SV TD ++ + G D A + + E++
Sbjct: 338 ENGRPITPAKSVTTDKTGEEDTTTTTASVGGATTDNNVATEEKTEFEIQ 386
Score = 37 (18.1 bits), Expect = 2.0e-17, Sum P(5) = 2.0e-17
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 578 SNNELKKLNNSITSDLPAPEKLLSVPEGLL 607
S+N+ N S T+ LP ++ L G++
Sbjct: 254 SDNQNPLFNYSATTPLPKSQRELMEDAGMV 283
>POMBASE|SPBC29A10.14 [details] [associations]
symbol:rec8 "meiotic cohesin complex subunit Rec8"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=IC] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0008278
"cohesin complex" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0030999 "linear element assembly"
evidence=IMP] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=IMP] [GO:0045143 "homologous chromosome
segregation" evidence=IDA] [GO:0045144 "meiotic sister chromatid
segregation" evidence=IDA;IMP] [GO:0051455 "attachment of spindle
microtubules to kinetochore involved in homologous chromosome
segregation" evidence=IMP] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 PomBase:SPBC29A10.14 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0007131 GO:GO:0000228 GO:GO:0042138
GO:GO:0051455 GO:GO:0045144 GO:GO:0000939 GO:GO:0030893
GO:GO:0030999 Gene3D:1.10.10.580 InterPro:IPR023093 EMBL:AJ223299
EMBL:AB018077 EMBL:M85298 PIR:T43428 RefSeq:NP_596059.1
ProteinModelPortal:P36626 IntAct:P36626 STRING:P36626
EnsemblFungi:SPBC29A10.14.1 GeneID:2540458 KEGG:spo:SPBC29A10.14
eggNOG:NOG42761 KO:K12780 OrthoDB:EOG45F0XT NextBio:20801585
Uniprot:P36626
Length = 561
Score = 174 (66.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 55/178 (30%), Positives = 88/178 (49%)
Query: 1 MFYSQFILAK-KGPLGTIWIAA-----HLERKLRKNQVADTDIGVSVDSILFPDVPIALR 54
MFY+Q +L K KG +G IW+AA H RKL K + DI + D + F P+ALR
Sbjct: 1 MFYNQDVLTKEKGGMGVIWLAATLGSKHSLRKLHKKDIMSVDIDEACDFVAFSPEPLALR 60
Query: 55 LSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQA---FRSTA---VDLPPEESTAPYHSI 108
LSS+L++GV R+++ + ++ S L++++ F S +D+ E+ T P +
Sbjct: 61 LSSNLMIGVTRVWAHQYSFFHSQVSTLHLRVRKELDHFTSKPFKNIDIQNEQ-TNPKQLL 119
Query: 109 T------LPETFDLDDFELPDNDIFQGNYVDHHVSTREQITLQDTM-DGMAY--STSQ 157
+PE D F LP D+ I++ +T+ D +Y +TSQ
Sbjct: 120 LAEDPAFIPEVSLYDAFNLPSVDLHVDMSSFTQPKENPNISVLETLPDSTSYLINTSQ 177
Score = 67 (28.6 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 40/203 (19%), Positives = 85/203 (41%)
Query: 470 LNIDVAH--EETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKM 527
L++D++ + + +I+VL+ TS ++ + + SL N+ ++ R+
Sbjct: 143 LHVDMSSFTQPKENPNISVLETLPDSTS--YLINTSQNYSLRNNVSSF---VYEDSRAFS 197
Query: 528 NQASVDVQGEECYLTDVMQSEKSQI-SGPSVCGDIQEDN-GTLDEPLDNATASNNELKKL 585
+ +D + +E D+ + K I S PS+ Q N G++ N+ + +
Sbjct: 198 TEEPLDFEFDEN--GDIQELTKGTINSDPSLQAASQHSNLGSVQREY-NSEEQESRIHMF 254
Query: 586 NNSITSD-LPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSY 644
I D LP P L SV + N+ ++ +++L ++ + S +++Y
Sbjct: 255 E--IDEDVLPLPVPLQSVMDSEHNENEPRALKRRKVQKLLEPDENIELSTRTLSQWRKNY 312
Query: 645 TESTITVESLNSSESFGVDRTKR 667
E I +E+ G K+
Sbjct: 313 VERMIALEATKYVRRRGASSAKK 335
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 165 (63.1 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 125/748 (16%), Positives = 285/748 (38%)
Query: 379 SGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLAD----YQASNKKK 434
S S+ ++S AS + +T + + S+ + S + ++ +S+K
Sbjct: 106 SSSSEVISSSSEEAS--SSEITSSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSKVS 163
Query: 435 SHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHT 494
S ++A S + S S VV + ++ + V+ S S V+ S +
Sbjct: 164 SSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVS 223
Query: 495 SDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISG 554
S +SS +S +Q + SSE S + V E ++V+ S S++S
Sbjct: 224 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS-SEVSS 282
Query: 555 PSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLI 614
S E + + + + +S++++ + ++S V + +
Sbjct: 283 SSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEV 342
Query: 615 VESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESFGVDRTKRNSEFIPX 674
V S+ E ++ S V + ++++S + T S+ V S + S + +SE
Sbjct: 343 VSSSSE---VSSSSEVSSSSEVSSSSQ--VTSSSEIVSSSSEVSSSSSEVVSSSSEVSSS 397
Query: 675 XXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVI 734
V S V EV+S S+SQ + V + +V+
Sbjct: 398 SEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVV 457
Query: 735 RQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMSAELTSVHCEIHDLS 794
+ + + + Q+ + + + + S+E+ S E+ S
Sbjct: 458 SSS-SEVSSSSEVSSSSEVSSSS----QVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 512
Query: 795 KISISETDKDHGSSEIANDIGCSIAPNVIEGGK--QGSKEPVALRNNGDTQPAETSIQTE 852
++ +S + + SSE+++ S + VI + S E + + + +E S +E
Sbjct: 513 EV-VSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSE 571
Query: 853 SHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCS--V 910
+ + ++S + V+ + +E ++ +E+ V + E S S V
Sbjct: 572 VVSSSSEVSSSSEVSSSSEVSSSSQVISS--SEVVSSSSEVVSSSSEVSSSSEVSSSSEV 629
Query: 911 NHGFGTSSQTDVASA-EVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAK 969
+ SS ++V+S+ +V + +++ +S + V + E + ++ V + V+
Sbjct: 630 SSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSS 689
Query: 970 MDNAKGVEDTEVIDRNIEN--IVAVETEAKGTDGVLVEEGKVGVS--VENGADVETDRSV 1025
+ + I + +V+ +E + + +V S V + ++V + V
Sbjct: 690 SSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEV 749
Query: 1026 LTDA-VNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSE 1084
+ + V + + + +++ +++ +S + + + S+ K +S+ + S
Sbjct: 750 SSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIIS---SSSKVSSSSEITSS 806
Query: 1085 EPVIDSTNSVELGGDTINVSLDDGKSQV 1112
I ST+ V + VS S+V
Sbjct: 807 SECISSTSEVNSSSSEV-VSSSSASSEV 833
Score = 133 (51.9 bits), Expect = 0.00022, P = 0.00022
Identities = 151/891 (16%), Positives = 338/891 (37%)
Query: 193 SDADPQGSVKPTTHWEQDNISERMNEISE-ERTVNDGANQLERVGLDAEPIEYAEAPSTP 251
S ++ S + ++ + + SE ++ SE + ++ + V +E + + S+
Sbjct: 224 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 283
Query: 252 GLVQEPNLSSGQKALASYDHFESEDQ--NSNELMATESRVNDLSNSDCHNGDGHTADWPL 309
V + S ++S S Q +S+E++++ S V S+S+ + ++ +
Sbjct: 284 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVS-SSSEVSSSSEVSSSSEV 342
Query: 310 HKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGTINPLDGSKRFK 369
S+ V + V ++ Q S E V S V S ++
Sbjct: 343 VSSSSE--VSSSSEVSSSSEVSSSS--QVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 398
Query: 370 NLQNAPGMLSGESQQVNSDKTAASLNCTN---VTCDMQDLNP-ETCPGSTNMPVSEDRLA 425
+ ++ +S S+ +S + ++S ++ V+ Q ++ E S+ + S + ++
Sbjct: 399 EVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVS 458
Query: 426 DY-QASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEETASVSI 484
+ S+ + + +EVS ++ + S +V + + + V+ S S
Sbjct: 459 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV------VSSSSEVSSSS 512
Query: 485 NVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDV 544
V+ S +S +SS +S +Q + + SSE S + V E ++V
Sbjct: 513 EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEV 572
Query: 545 MQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITS--DLPAPEKLLSV 602
+ S S V + + + +S++E+ ++ ++S ++ + ++ S
Sbjct: 573 VSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSS 632
Query: 603 PEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNK--LNSGKKRSYTESTITVES--LNSSE 658
E + + T E+++ S V + + ++S + S + ++ S +SSE
Sbjct: 633 SEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 692
Query: 659 SFGVDRTKRNSEFIPXXXXXXXXI-LVGRKSSVLKMKPTPPVREVASRKRARSASQTNAL 717
+S+ I +V S V EV+S S+S+ ++
Sbjct: 693 VSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSS- 751
Query: 718 KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLED-DIFNEPIF 776
+V + ++ ++T++ ++ +A + EI+ + +I +
Sbjct: 752 SSEVTSSSSEIISSSS-SSEVTSSSEVSS-SSQATSSSSEIISSSSKVSSSSEITSSSEC 809
Query: 777 TGMSAELTSVHCEIHDLSKISI----SETDKDHGSSEI---ANDIGCSIAPNVIEGGKQG 829
++E+ S E+ S S S T+ SSE ++ + S + +
Sbjct: 810 ISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECISSSSEVI 869
Query: 830 SKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAE 889
S V ++ +ET I ++ + +++T + S + ++ +E
Sbjct: 870 SSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVSKSSEHSSLSSESCPS 929
Query: 890 LNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVC 949
V + +E +C +HG S+T + PT T T++ S+ V T C
Sbjct: 930 EETSTVSETS---SETVTCK-HHG---CSKTKTHHST----PTKCVTKTIETSVYV-TTC 977
Query: 950 LTPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNI--ENIVAVETEAKGTDGVLVEEG 1007
T + V V T+ + + T VI+ N NI E + + ++E
Sbjct: 978 PDKSITTETAVVIVVTNESTATTYTEIIKTTVIEGNTLTTNIPIKHVETETAE--IIEYT 1035
Query: 1008 KV-GVSVENGADVETDRSVLTDAVNTQEGVSLETG-GYNDLAAANGDNSRL 1056
+ ++ NG + + + V+ YN+ ANG +R+
Sbjct: 1036 TICPTTLPNGHETTVTAGIAIGTNGQGQKVTKTVPLEYNESTLANGHVTRV 1086
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 165 (63.1 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 125/748 (16%), Positives = 285/748 (38%)
Query: 379 SGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLAD----YQASNKKK 434
S S+ ++S AS + +T + + S+ + S + ++ +S+K
Sbjct: 106 SSSSEVISSSSEEAS--SSEITSSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSKVS 163
Query: 435 SHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHT 494
S ++A S + S S VV + ++ + V+ S S V+ S +
Sbjct: 164 SSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVS 223
Query: 495 SDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQISG 554
S +SS +S +Q + SSE S + V E ++V+ S S++S
Sbjct: 224 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS-SEVSS 282
Query: 555 PSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLI 614
S E + + + + +S++++ + ++S V + +
Sbjct: 283 SSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEV 342
Query: 615 VESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESFGVDRTKRNSEFIPX 674
V S+ E ++ S V + ++++S + T S+ V S + S + +SE
Sbjct: 343 VSSSSE---VSSSSEVSSSSEVSSSSQ--VTSSSEIVSSSSEVSSSSSEVVSSSSEVSSS 397
Query: 675 XXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVI 734
V S V EV+S S+SQ + V + +V+
Sbjct: 398 SEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVV 457
Query: 735 RQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMSAELTSVHCEIHDLS 794
+ + + + Q+ + + + + S+E+ S E+ S
Sbjct: 458 SSS-SEVSSSSEVSSSSEVSSSS----QVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 512
Query: 795 KISISETDKDHGSSEIANDIGCSIAPNVIEGGK--QGSKEPVALRNNGDTQPAETSIQTE 852
++ +S + + SSE+++ S + VI + S E + + + +E S +E
Sbjct: 513 EV-VSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSE 571
Query: 853 SHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCS--V 910
+ + ++S + V+ + +E ++ +E+ V + E S S V
Sbjct: 572 VVSSSSEVSSSSEVSSSSEVSSSSQVISS--SEVVSSSSEVVSSSSEVSSSSEVSSSSEV 629
Query: 911 NHGFGTSSQTDVASA-EVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAK 969
+ SS ++V+S+ +V + +++ +S + V + E + ++ V + V+
Sbjct: 630 SSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSS 689
Query: 970 MDNAKGVEDTEVIDRNIEN--IVAVETEAKGTDGVLVEEGKVGVS--VENGADVETDRSV 1025
+ + I + +V+ +E + + +V S V + ++V + V
Sbjct: 690 SSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEV 749
Query: 1026 LTDA-VNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSE 1084
+ + V + + + +++ +++ +S + + + S+ K +S+ + S
Sbjct: 750 SSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIIS---SSSKVSSSSEITSS 806
Query: 1085 EPVIDSTNSVELGGDTINVSLDDGKSQV 1112
I ST+ V + VS S+V
Sbjct: 807 SECISSTSEVNSSSSEV-VSSSSASSEV 833
Score = 133 (51.9 bits), Expect = 0.00022, P = 0.00022
Identities = 151/891 (16%), Positives = 338/891 (37%)
Query: 193 SDADPQGSVKPTTHWEQDNISERMNEISE-ERTVNDGANQLERVGLDAEPIEYAEAPSTP 251
S ++ S + ++ + + SE ++ SE + ++ + V +E + + S+
Sbjct: 224 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 283
Query: 252 GLVQEPNLSSGQKALASYDHFESEDQ--NSNELMATESRVNDLSNSDCHNGDGHTADWPL 309
V + S ++S S Q +S+E++++ S V S+S+ + ++ +
Sbjct: 284 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVS-SSSEVSSSSEVSSSSEV 342
Query: 310 HKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGTINPLDGSKRFK 369
S+ V + V ++ Q S E V S V S ++
Sbjct: 343 VSSSSE--VSSSSEVSSSSEVSSSS--QVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSS 398
Query: 370 NLQNAPGMLSGESQQVNSDKTAASLNCTN---VTCDMQDLNP-ETCPGSTNMPVSEDRLA 425
+ ++ +S S+ +S + ++S ++ V+ Q ++ E S+ + S + ++
Sbjct: 399 EVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVS 458
Query: 426 DY-QASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHEETASVSI 484
+ S+ + + +EVS ++ + S +V + + + V+ S S
Sbjct: 459 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV------VSSSSEVSSSS 512
Query: 485 NVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDV 544
V+ S +S +SS +S +Q + + SSE S + V E ++V
Sbjct: 513 EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEV 572
Query: 545 MQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITS--DLPAPEKLLSV 602
+ S S V + + + +S++E+ ++ ++S ++ + ++ S
Sbjct: 573 VSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSS 632
Query: 603 PEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNK--LNSGKKRSYTESTITVES--LNSSE 658
E + + T E+++ S V + + ++S + S + ++ S +SSE
Sbjct: 633 SEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 692
Query: 659 SFGVDRTKRNSEFIPXXXXXXXXI-LVGRKSSVLKMKPTPPVREVASRKRARSASQTNAL 717
+S+ I +V S V EV+S S+S+ ++
Sbjct: 693 VSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSS- 751
Query: 718 KRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLED-DIFNEPIF 776
+V + ++ ++T++ ++ +A + EI+ + +I +
Sbjct: 752 SSEVTSSSSEIISSSS-SSEVTSSSEVSS-SSQATSSSSEIISSSSKVSSSSEITSSSEC 809
Query: 777 TGMSAELTSVHCEIHDLSKISI----SETDKDHGSSEI---ANDIGCSIAPNVIEGGKQG 829
++E+ S E+ S S S T+ SSE ++ + S + +
Sbjct: 810 ISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECISSSSEVI 869
Query: 830 SKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAE 889
S V ++ +ET I ++ + +++T + S + ++ +E
Sbjct: 870 SSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVSKSSEHSSLSSESCPS 929
Query: 890 LNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVC 949
V + +E +C +HG S+T + PT T T++ S+ V T C
Sbjct: 930 EETSTVSETS---SETVTCK-HHG---CSKTKTHHST----PTKCVTKTIETSVYV-TTC 977
Query: 950 LTPEPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNI--ENIVAVETEAKGTDGVLVEEG 1007
T + V V T+ + + T VI+ N NI E + + ++E
Sbjct: 978 PDKSITTETAVVIVVTNESTATTYTEIIKTTVIEGNTLTTNIPIKHVETETAE--IIEYT 1035
Query: 1008 KV-GVSVENGADVETDRSVLTDAVNTQEGVSLETG-GYNDLAAANGDNSRL 1056
+ ++ NG + + + V+ YN+ ANG +R+
Sbjct: 1036 TICPTTLPNGHETTVTAGIAIGTNGQGQKVTKTVPLEYNESTLANGHVTRV 1086
>CGD|CAL0000863 [details] [associations]
symbol:MCD1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
CGD:CAL0000863 EMBL:AACQ01000032 GO:GO:0000228 eggNOG:NOG249424
KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093 RefSeq:XP_719394.1
ProteinModelPortal:Q5ACK9 STRING:Q5ACK9 GeneID:3639044
KEGG:cal:CaO19.7634 Uniprot:Q5ACK9
Length = 564
Score = 131 (51.2 bits), Expect = 1.8e-07, Sum P(5) = 1.8e-07
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 30 NQVADTDIGVSVD--SILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQ 87
N T++ VS + S L I LRLS LLLG+VRIYSRK YL DD ++ L K+K
Sbjct: 45 NHPVITNVSVSQELPSDLDSTNTITLRLSGQLLLGIVRIYSRKTEYLLDDVNDILYKLKA 104
Query: 88 AFR-STAVDL 96
+F+ S+ V+L
Sbjct: 105 SFKLSSGVNL 114
Score = 60 (26.2 bits), Expect = 1.8e-07, Sum P(5) = 1.8e-07
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 1202 TRKEASRMFFETLVLKTKDYIHVEQ 1226
+RKEA++ FFE LVL T + I + Q
Sbjct: 516 SRKEATKCFFELLVLATNNCISLGQ 540
Score = 53 (23.7 bits), Expect = 1.8e-07, Sum P(5) = 1.8e-07
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 93 AVDLP--PEESTAPYHSITLPETFDLD-DFELPD-NDIFQGNYVDHHVSTREQITLQD 146
+++ P EE+ AP H+ E F+LD D L D N I G ++ RE + D
Sbjct: 190 SIEFPRYEEEAAAPGHT----EDFELDFDLNLDDDNSIEYGRDASVSINDREISIISD 243
Score = 48 (22.0 bits), Expect = 1.8e-07, Sum P(5) = 1.8e-07
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 698 PVREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAP 752
P R R R Q RK+++D + G I+Q N E I + AP
Sbjct: 295 PRRVRQKRTRITEDGQIITNNRKLVVDSEEAMEGLAIQQLKDNQEKILSGQDSAP 349
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 516 GVDLHSSERSKMNQASVDVQGEECYLTDVMQSE-KSQISGPSVCG----DIQEDNGT--- 567
GV+L S S NQ V++ E+ L ++ K Q++ ++ D+ + +GT
Sbjct: 111 GVNLGSDNIS--NQ--VNLPREQTILQNLNSIILKDQVTSANLLQQDDLDLSDIHGTSTG 166
Query: 568 --LDEPLD-NATASNNELKKLNNSITSDLPAPEKLLSVP 603
LD L+ NA+ S++E + +NSI + P E+ + P
Sbjct: 167 SGLDGMLNHNASQSSSEYSEYDNSI--EFPRYEEEAAAP 203
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(5) = 1.3e-06
Identities = 23/110 (20%), Positives = 48/110 (43%)
Query: 210 DNISERMNEISEERTVNDGANQL---ERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKAL 266
DNIS ++N + E+T+ N + ++V A ++ + + + + SG +
Sbjct: 117 DNISNQVN-LPREQTILQNLNSIILKDQV-TSANLLQQDDLDLSD--IHGTSTGSGLDGM 172
Query: 267 ASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSNHD 316
+++ Q+S+E ++ + + GHT D+ L D N D
Sbjct: 173 LNHN----ASQSSSEYSEYDNSIEFPRYEEEAAAPGHTEDFELDFDLNLD 218
Score = 43 (20.2 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 15/84 (17%), Positives = 39/84 (46%)
Query: 971 DNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDAV 1030
D A+ ED ++ + + E++ + V + + ++ E+G + +R ++ D+
Sbjct: 268 DEAENEEDRQLPSNSEHQERSAESDLQPRR---VRQKRTRIT-EDGQIITNNRKLVVDSE 323
Query: 1031 NTQEGVSLETGGYNDLAAANGDNS 1054
EG++++ N +G +S
Sbjct: 324 EAMEGLAIQQLKDNQEKILSGQDS 347
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(5) = 1.8e-07
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 975 GVEDTEVIDRNIENIV--AVETEAKGTDGVLVEEGKVGVSVENGADVETDRSV 1025
G+ D EV + + N A TE G + L+E K +VE +ETD +
Sbjct: 444 GILDDEVDEEDDTNYTHTARVTEQIGQE--LIELFKSSNTVEFEKLIETDSEI 494
>SGD|S000002161 [details] [associations]
symbol:MCD1 "Essential alpha-kleisin subunit of the cohesin
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0034087 "establishment of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0034990 "nuclear mitotic cohesin complex" evidence=IDA]
InterPro:IPR006909 InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825
SGD:S000002161 GO:GO:0005739 GO:GO:0006915 GO:GO:0000775
GO:GO:0051301 EMBL:BK006938 GO:GO:0003682 GO:GO:0006302
GO:GO:0034087 GO:GO:0007076 EMBL:Z48432 GO:GO:0006473 EMBL:Z48008
eggNOG:NOG249424 KO:K06670 Gene3D:1.10.10.580 InterPro:IPR023093
OrthoDB:EOG4C2MKJ EMBL:Y14280 EMBL:U23759 EMBL:Z74051 PIR:S50979
RefSeq:NP_010281.1 PDB:1W1W PDBsum:1W1W ProteinModelPortal:Q12158
SMR:Q12158 DIP:DIP-5812N IntAct:Q12158 MINT:MINT-627334
STRING:Q12158 PaxDb:Q12158 PeptideAtlas:Q12158 EnsemblFungi:YDL003W
GeneID:851561 KEGG:sce:YDL003W CYGD:YDL003w HOGENOM:HOG000141751
EvolutionaryTrace:Q12158 NextBio:968995 PMAP-CutDB:Q12158
Genevestigator:Q12158 GermOnline:YDL003W GO:GO:0034990
Uniprot:Q12158
Length = 566
Score = 114 (45.2 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 7 ILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL----FPDVP-----IALRLSS 57
+ KGPL IW+A+++ + + V T I S I D I LR S
Sbjct: 14 LATNKGPLAQIWLASNMSN-IPRGSVIQTHIAESAKEIAKASGCDDESGDNEYITLRTSG 72
Query: 58 HLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRST 92
LL G+VR+YS++ +L D + L KI F+++
Sbjct: 73 ELLQGIVRVYSKQATFLLTDIKDTLTKISMLFKTS 107
Score = 70 (29.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 52/234 (22%), Positives = 95/234 (40%)
Query: 541 LTDVMQSEKSQISGPSVCGDIQEDNGT-LDEPLDNAT--ASNNELKK-LNNSITSDLPA- 595
+TD M + + +G + +DE +N+ AS+N K+ +N++ + P
Sbjct: 300 ITDAMTESQPKQTGTRRNSKLLNTKSIQIDEETENSESIASSNTYKEERSNNLLTPQPTN 359
Query: 596 --PEKLLS-VPEGLLNKP-----NDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTES 647
++L S + E + P N L ES ++++ G G +LN + T+
Sbjct: 360 FTTKRLWSEITESMSYLPDPILKNFLSYESLKKRKIHNGREGSIEEPELNVSL--NLTDD 417
Query: 648 TITVESLNSSESFGVDRTKRNSEFIPXXXXXXXX------ILVGRKSSVLKMKPTPPVRE 701
I+ N + SF + T S+F+P I+ + + T VR
Sbjct: 418 VISNAGTNDN-SFN-ELTDNMSDFVPIDAGLNEAPFPEENIIDAKTRNEQTTIQTEKVRP 475
Query: 702 VASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTG 755
+++ Q + RK L ++ V+ DV++ Q NTE I K+ G
Sbjct: 476 TPGEVASKAIVQMAKILRKELSEEKEVIFTDVLKSQ-ANTEP-ENITKREASRG 527
Score = 66 (28.3 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 1202 TRKEASRMFFETLVLKTKDYIHVEQARPLDNINI--KP 1237
T++EASR FF+ L L T+ I + Q NI I KP
Sbjct: 520 TKREASRGFFDILSLATEGCIGLSQTEAFGNIKIDAKP 557
Score = 62 (26.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 34/154 (22%), Positives = 61/154 (39%)
Query: 294 NSDCHNGDGHTADWPLHKDSNHDTVQCMLPEKNGYHVRDA--AVKQAESLGESVKSMPFV 351
N D H D+PL D+ + EKN + D +V+Q LGES+ S
Sbjct: 222 NFDTHENYIQDDDFPLD-DAGTIGWDLGITEKNDQNNDDDDNSVEQGRRLGESIMSEEPT 280
Query: 352 PDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETC 411
G + I + + +A M + +Q + + + LN ++ D + N E+
Sbjct: 281 DFGFDLDIEKEAPAGNIDTITDA--MTESQPKQTGTRRNSKLLNTKSIQIDEETENSESI 338
Query: 412 PGS-TNMPVSEDRLADYQASNKKKSHNDAEVSDN 444
S T + L Q +N +E++++
Sbjct: 339 ASSNTYKEERSNNLLTPQPTNFTTKRLWSEITES 372
Score = 39 (18.8 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 418 PVSEDRLADYQASNKKKSHNDAEVS 442
P+ ++ L+ Y++ K+K HN E S
Sbjct: 379 PILKNFLS-YESLKKRKIHNGREGS 402
>ASPGD|ASPL0000077407 [details] [associations]
symbol:AN11113 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0000939 "condensed
chromosome inner kinetochore" evidence=IEA] [GO:0030893 "meiotic
cohesin complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0045144 "meiotic sister chromatid segregation"
evidence=IEA] [GO:0030999 "linear element assembly" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=IEA] [GO:0051455 "attachment of spindle microtubules to
kinetochore involved in homologous chromosome segregation"
evidence=IEA] InterPro:IPR006910 Pfam:PF04825 EMBL:BN001303
EnsemblFungi:CADANIAT00006294 OMA:GKARPEQ Uniprot:C8V9S2
Length = 737
Score = 140 (54.3 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 14 LGTIWIAAHL-----ERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYS 68
+ T+W+ A L R+L + + + D+ + + I+ P P+ALRL S+LL G+ R+YS
Sbjct: 83 VATVWLVATLGARSISRRLNRRTIQNVDVPKACNVIIDPAAPMALRLQSNLLYGISRVYS 142
Query: 69 RKVNYLFDDCSEALLKIKQAFRST-AVDLPPEESTAPYHSITLPETFDLDDFELPDNDI 126
++ Y D K++Q RS A L P A + LP +D F LP+N++
Sbjct: 143 QQCGYTLLDVQAMHDKMRQTLRSVPAGGLDPSAGKARPEQLVLP--YD-PSF-LPENNL 197
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 43/184 (23%), Positives = 73/184 (39%)
Query: 810 IANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQ 869
I N+ + P V G + +EPV + +G T P + D Q +N +
Sbjct: 328 ITNEPARPVRPAVFCDGDEAPREPVEIETHGATAPQRQ--RGPKFLASDLQTALRNAELA 385
Query: 870 GHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNH-GFGTSSQTDVASAEVC 928
+N D + N LA + +R + + A+ V G G S V S+ V
Sbjct: 386 A-MNEDY-----MHNVALAARQKRQ-NRVSTQAKRNAAYWVFRLGIG-SVGAGVGSSRVI 437
Query: 929 NQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSV-AKMDNAKG----VEDTEVID 983
+ P + L +T+ P D +P G V A+ D+ +G V+DT + +
Sbjct: 438 H-PL----HFFSGDELYETLVSHKRPLED-EPEAEGRRVRAREDDEQGRMDIVDDTNLWN 491
Query: 984 RNIE 987
++E
Sbjct: 492 EDVE 495
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 861 FGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVA 903
+ N GH + D D ++ + N M D N +VA
Sbjct: 585 YDLDNLSIPGHYDDDLDKLEGFDLGNYLDENVMGDDNSNADVA 627
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 146 (56.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 172/943 (18%), Positives = 341/943 (36%)
Query: 186 TAAGHGVSDADPQGSVKPT-THWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEY 244
+++ + ++ Q S T T ++ ++ ++ +E S + D Q E P+
Sbjct: 326 SSSSESLPNSSTQDSSSSTETSFQTESTTDATDESSSTESQPDSTTQ-ESSSSTEGPLS- 383
Query: 245 AEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELM--AT-ESRVNDLSNSDCHNGD 301
E+ ST Q + S Q + +E S E AT ES + S
Sbjct: 384 TES-STAVTDQSSSTESSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQES 442
Query: 302 GHTADWPLHKDSNHD-TVQCMLPEKNGYHVRDAAVKQAESLGE---SVKSMPFVPDGSEG 357
+ + PL +S+ + T + E + +D+ +++ S E S +S + S
Sbjct: 443 SSSTEGPLSTESSTEATNESSSTESS----QDSTTQESSSSTEGPLSTESSTEATNESSS 498
Query: 358 TINPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNM 417
T + D + + ++ ++ G LS ES T A+ N ++ T QD + ST
Sbjct: 499 TESSQDSTTQ-ESSSSSEGPLSTESS------TEAT-NESSSTESSQDSTTQESSSSTES 550
Query: 418 PVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHE 477
P+S + + S+ +S D+ ++++ + + ++ A ++ + E
Sbjct: 551 PLSTEPSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATNESSSTESSQDSTTQE 610
Query: 478 ETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGE 537
++S P S +S + +++S ++ Q SS +
Sbjct: 611 SSSSTE----GPLSTESS----TEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEAN 662
Query: 538 ECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPE 597
E T+ Q +Q S S G + + T + ++T S+ + +S +S+ P
Sbjct: 663 ESSSTESSQDSTTQESSSSTEGPLSTEPST-EANESSSTESSQDSTTQESSSSSEGPLST 721
Query: 598 KLLSVPEGLLNKPNDLIVESTPEKEVLAGSG--GVDAGNKLNSGKKRSYTESTITVESLN 655
+ S E + + +ST ++ + + + N ++ + T ES +
Sbjct: 722 E--SSTEANESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSS 779
Query: 656 SSESFGVDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKP--TPPVREVASRKRARSASQ 713
S+E G T+ ++E ++SS P T E S+
Sbjct: 780 STE--GPLSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQD 837
Query: 714 TNALKRKVLMDDTMVLHGDV-IRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFN 772
+ + +D + + ++TE + + + E + E N
Sbjct: 838 STTQESSSSTEDPLSTESSTEATYESSSTESSQDSTTQESSSSTEGPLSTESSTEGS--N 895
Query: 773 EPIFTGMSAELTSVHCEIHDLSKISIS-ETDKDHGSS-EIANDIGCSIAPNVIEG--GKQ 828
E T S + T+ S +S T+ + SS E + D + + EG +
Sbjct: 896 ESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTE 955
Query: 829 GS---KEPVALRNNGDTQPAETSIQTE-------SHQGIDHQFGAQNTDAQGHINSDTDV 878
S E + ++ D+ E+S TE S +G + +++ S +
Sbjct: 956 SSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQESSSST 1015
Query: 879 VKTVQNEPLAELNEMDVDRGNVE-VAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTN 937
+ EP E NE + + +E+S S T S T+ ++ + + D T
Sbjct: 1016 ESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEASNESSSTESSQDST- 1074
Query: 938 TVDASLLVDTVCLTPEPT-VDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIENIVAVETEA 996
T ++S + T T V +P + + N+ T+ +N ++E +
Sbjct: 1075 TQESSSSTEGPLSTESSTEVTQEP----SPTESLPNSS----TQGTPCTTDNPSSLEP-S 1125
Query: 997 KGTDGVLVEEGKVGVSVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRL 1056
T G + G G ENG + TD + E S G +D + +N
Sbjct: 1126 PSTPGNDDDSGNSGS--ENGNSSTSGSPCTTDNPSDPESSSSTPGNDDDSGNSGSENGNS 1183
Query: 1057 EVRNE----DGPLAGDWGSN--GKDPTSNHMFSEEPVIDSTNS 1093
D P + S+ G D S + SE + +T +
Sbjct: 1184 STSGSPCTTDNPSDPESSSSTPGNDDDSGNSGSESGITSTTGA 1226
>SGD|S000001912 [details] [associations]
symbol:YFR016C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0045454 "cell redox
homeostasis" evidence=IEA] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0005933 "cellular bud"
evidence=IDA] InterPro:IPR002109 PROSITE:PS51354 SGD:S000001912
GO:GO:0005737 GO:GO:0009055 EMBL:D50617 EMBL:BK006940
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
eggNOG:NOG12793 GO:GO:0045454 GO:GO:0015035
GeneTree:ENSGT00550000074593 GO:GO:0005933 PIR:S56271
RefSeq:NP_116671.1 ProteinModelPortal:P43597 SMR:P43597
DIP:DIP-4195N IntAct:P43597 MINT:MINT-482664 STRING:P43597
PaxDb:P43597 PeptideAtlas:P43597 EnsemblFungi:YFR016C GeneID:850570
KEGG:sce:YFR016C CYGD:YFR016c OMA:ETHEDTE OrthoDB:EOG4CRQ8M
NextBio:966384 Genevestigator:P43597 GermOnline:YFR016C
Uniprot:P43597
Length = 1233
Score = 140 (54.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 163/755 (21%), Positives = 294/755 (38%)
Query: 379 SGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKS--H 436
+GE QQ SD+ S +V Q ET G + V E + + + K+ S H
Sbjct: 358 AGEKQQTESDRDGIS---PSVLAKNQK---ETEIGKEDH-VFEQKDKEDEKCRKELSVNH 410
Query: 437 -NDAEVSDNAAGSGSLVVVDADIHACPD-AKDP-KMLNIDVAHEE--TASVSINVLKPCS 491
N+ + NAAGS S++ + + D P K ++ + + + T +S+ V K
Sbjct: 411 ENNMSHNFNAAGSDSIIPPETERETYDDETMGPTKRISDNEKNLQHGTNDISVEVEKEEE 470
Query: 492 YHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSE--- 548
+ S+ +N+ + ++E S + S +GEE D QSE
Sbjct: 471 EEEEEEENST--FSKVKKENVTGEQEAVRNNEVSGTEEESTS-KGEEIMGGDEKQSEAGE 527
Query: 549 KS---QISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLP-APEKLLSVPE 604
KS +I G + I +DN L++ + T N + + D+P AP + + E
Sbjct: 528 KSSIIEIEGSANSAKISKDNLVLEDEAEAPTQENKPTEVVGEI---DIPDAPRDDVEIVE 584
Query: 605 GLLNK--PNDL-IVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSESFG 661
+ P DL + + E E + V A + K +I+ + E
Sbjct: 585 AVEKNIIPEDLEVAKEDQEGEQVKLDEPVKA---MKDDKIAMRGAESISEDMKKKQEGTA 641
Query: 662 -VDRTKRNSEFIPXXXXXXXXILVGRKSSVLKMKPTPPVREVASRKRARSASQTNALKRK 720
+ K E + V KS K +P V + + R Q N +
Sbjct: 642 ELSNEKAKKEVDETARESAEGVEV-EKS---KTPESPKVVKRCTSGRPEDL-QINERDPE 696
Query: 721 VLMDDTMVLHGDVIRQQLTNTEDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMS 780
VL +D V DV + T E+ K+ +I Q + + D+ + T
Sbjct: 697 VLKEDVRVPDEDVKPEIATTIENSEEEDPKSQRV--QISTEQAETTQKDMGDVGSTTSFK 754
Query: 781 AELTSVHCEI-HDLSKISISETDKDHG-----SSEI--ANDIGCS---IAPNVIEGGKQG 829
E EI + KI+ +T+ +HG +SE A+D+G + I P+ E K+
Sbjct: 755 EEEKPKRFEITQEGDKITGKDTNHEHGEATEAASENSKASDVGTAEKYIEPSS-ESVKKD 813
Query: 830 SKEPVALRNNGDTQPAETSIQTESHQGI-DHQFGAQNTDAQGHINSDTDVVKTVQNEPLA 888
++E + N+ T+ + + E+ + + A+ + DT+ V+N
Sbjct: 814 TEEDAEVENSEKTEFIKVKAELENLDAPKEAEVTAELNKENEDVEVDTEEDAEVENSEKT 873
Query: 889 ELNEMDVDRGNVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTV 948
E ++ + GN++ +EA + DV A + K + + + D
Sbjct: 874 EFIKVKAELGNLDAPKEAEVTAELN---KENEDVEVAATSKEDIETKCSEPAETPIEDGT 930
Query: 949 CLTPEPTVDAQPVEVGTSVAK-MDNAKGVEDTEVI--DRNIENIVAVETEAKGTDGVLVE 1005
C E V + E T + M+N+K E + + D+ I++I + E + T L E
Sbjct: 931 CTEAE--VSKKDAEAVTKEDENMENSKIAEALKDVTGDQEIDDI-NISDEFQRTVE-LPE 986
Query: 1006 EGKVGVSVENGADVE-----TDRSV-LTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVR 1059
K + G D E T++ L D V +E ++ E N++ + S+L+
Sbjct: 987 LEKQDIKDNKGEDKELEVEETEKETSLPDLV-VEENITEEK---NEIKQEEEEVSQLDF- 1041
Query: 1060 NEDGPLAGDWGSNGKDPTSNHMFSEEPVIDSTNSV 1094
NE ++ + +N ++ + E P S + +
Sbjct: 1042 NETESISKEAPNNDENGFEDQSTRENPKKASADDI 1076
>MGI|MGI:1929645 [details] [associations]
symbol:Rec8 "REC8 homolog (yeast)" species:10090 "Mus
musculus" [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IDA] [GO:0000780 "condensed nuclear chromosome,
centromeric region" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=IDA] [GO:0000800 "lateral element" evidence=IDA]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0001673 "male
germ cell nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007126 "meiosis" evidence=IPI] [GO:0007129
"synapsis" evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007286 "spermatid development" evidence=IMP] [GO:0030893
"meiotic cohesin complex" evidence=IDA] [GO:0034991 "nuclear
meiotic cohesin complex" evidence=IDA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 MGI:MGI:1929645
GO:GO:0007059 GO:GO:0005654 GO:GO:0007286 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0001673
GO:GO:0000778 GO:GO:0001556 GO:GO:0000800 GO:GO:0007141
GO:GO:0007129 Gene3D:1.10.10.580 InterPro:IPR023093 GO:GO:0034991
CTD:9985 eggNOG:NOG248028 HOVERGEN:HBG056766 KO:K13054
OrthoDB:EOG4B5P55 EMBL:AF262055 EMBL:AK077167 EMBL:AK146832
EMBL:BC052155 IPI:IPI00311744 RefSeq:NP_064386.2 UniGene:Mm.23149
ProteinModelPortal:Q8C5S7 SMR:Q8C5S7 STRING:Q8C5S7
PhosphoSite:Q8C5S7 PRIDE:Q8C5S7 Ensembl:ENSMUST00000002395
GeneID:56739 KEGG:mmu:56739 UCSC:uc007tzo.1
GeneTree:ENSGT00390000011379 HOGENOM:HOG000154087 InParanoid:Q8C5S7
OMA:ARVFYLL NextBio:313236 Bgee:Q8C5S7 CleanEx:MM_REC8
Genevestigator:Q8C5S7 GermOnline:ENSMUSG00000002324 Uniprot:Q8C5S7
Length = 591
Score = 100 (40.3 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL-------------F 46
MFY +L + G TIW+AA +L K + + ++ + + IL
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLNVNVVKTCEEILNYVLVRVQPPVAGL 60
Query: 47 PDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYH 106
P +L LS+ L +GV+R+Y ++ YL +D L + +A +D+ EE+ P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYFQQCQYLVEDIQHILEHLHRAQLRIRIDM--EEADLP-- 116
Query: 107 SITLP 111
S+ LP
Sbjct: 117 SLLLP 121
Score = 82 (33.9 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 1186 VQGRKVLALDHLLVGKT-RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1240
+Q K L L+ + RK ASR+F+ LVL T+ + VEQ +P + I+PG K
Sbjct: 534 LQANKELDFSSLVPPLSPRKLASRVFYLLLVLSTQKILLVEQQKPYGPLLIRPGPK 589
Score = 49 (22.3 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 395 NCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAG-SGSLVV 453
+C V M P+ T V E+R AD + K ++ ++ EV A SG L++
Sbjct: 409 HCAQVPQRMLRQRPQL---ETEETVEEERAADEEERRKTEALSEIEVLREAQEPSGPLML 465
Query: 454 V-DADIHACPDAK 465
+ + A D K
Sbjct: 466 SSELSLEAAEDEK 478
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 214 ERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLS 260
E + EER ++ + + E + A+ PS P L+ LS
Sbjct: 425 ETEETVEEERAADEEERRKTEALSEIEVLREAQEPSGP-LMLSSELS 470
>UNIPROTKB|H0YLK4 [details] [associations]
symbol:REC8 "Meiotic recombination protein REC8 homolog"
species:9606 "Homo sapiens" [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0000780
GO:GO:0007286 GO:GO:0001673 GO:GO:0001556 GO:GO:0000800
GO:GO:0007141 EMBL:AL136295 GO:GO:0007129 GO:GO:0030893
Gene3D:1.10.10.580 InterPro:IPR023093 HGNC:HGNC:16879 OMA:ARVFYLL
ProteinModelPortal:H0YLK4 SMR:H0YLK4 Ensembl:ENST00000559919
PhylomeDB:H0YLK4 Bgee:H0YLK4 Uniprot:H0YLK4
Length = 546
Score = 106 (42.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILF----------PDV 49
MFY +L + G TIW+AA +L K + ++ + + IL P +
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGL 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTA--P 104
P +L LS+ L +GV+R+YS++ YL +D L ++ +A +D+ E + P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMETELPSLLLP 120
Query: 105 YHSITLPETFD 115
H + + ET +
Sbjct: 121 NH-LAMMETLE 130
Score = 77 (32.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1203 RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1240
R+ A+R+F+ LVL + +HV+Q +P + I+PG +
Sbjct: 507 RRMAARVFYLLLVLSAQQILHVKQEKPYGRLLIQPGPR 544
>UNIPROTKB|O95072 [details] [associations]
symbol:REC8 "Meiotic recombination protein REC8 homolog"
species:9606 "Homo sapiens" [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0005634
"nucleus" evidence=TAS] [GO:0007126 "meiosis" evidence=TAS]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0007283 "spermatogenesis" evidence=TAS] [GO:0007062 "sister
chromatid cohesion" evidence=TAS] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 GO:GO:0005634
Reactome:REACT_115566 GO:GO:0000780 GO:GO:0007286 GO:GO:0007283
Reactome:REACT_111183 EMBL:CH471078 GO:GO:0001673 GO:GO:0001556
GO:GO:0007131 GO:GO:0000800 GO:GO:0007141 EMBL:AL136295
GO:GO:0007129 GO:GO:0007062 GO:GO:0030893 Gene3D:1.10.10.580
InterPro:IPR023093 EMBL:AF006264 EMBL:AK001435 EMBL:AK291191
EMBL:CR457263 EMBL:AL832973 EMBL:BC004159 EMBL:BC010887
EMBL:BC019326 IPI:IPI00293487 IPI:IPI00937443 RefSeq:NP_001041670.1
RefSeq:NP_005123.2 UniGene:Hs.419259 ProteinModelPortal:O95072
SMR:O95072 STRING:O95072 PhosphoSite:O95072 PRIDE:O95072
Ensembl:ENST00000311457 GeneID:9985 KEGG:hsa:9985 UCSC:uc001wmr.3
CTD:9985 GeneCards:GC14P024641 HGNC:HGNC:16879 HPA:HPA031727
HPA:HPA031729 MIM:608193 neXtProt:NX_O95072 PharmGKB:PA162401009
eggNOG:NOG248028 HOVERGEN:HBG056766 InParanoid:O95072 KO:K13054
OrthoDB:EOG4B5P55 GenomeRNAi:9985 NextBio:37700 Bgee:O95072
CleanEx:HS_REC8 Genevestigator:O95072 GermOnline:ENSG00000100918
Uniprot:O95072
Length = 547
Score = 106 (42.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILF----------PDV 49
MFY +L + G TIW+AA +L K + ++ + + IL P +
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGSRLVKREYLRVNVVKTCEEILNYVLVRVQPPQPGL 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTA--P 104
P +L LS+ L +GV+R+YS++ YL +D L ++ +A +D+ E + P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMETELPSLLLP 120
Query: 105 YHSITLPETFD 115
H + + ET +
Sbjct: 121 NH-LAMMETLE 130
Score = 77 (32.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 1203 RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAK 1240
R+ A+R+F+ LVL + +HV+Q +P + I+PG +
Sbjct: 508 RRMAARVFYLLLVLSAQQILHVKQEKPYGRLLIQPGPR 545
>UNIPROTKB|F1PHT7 [details] [associations]
symbol:DMP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR009889 Pfam:PF07263 GO:GO:0030198 GO:GO:0001503
GeneTree:ENSGT00550000074777 PANTHER:PTHR23400 OMA:QDSGDSQ
EMBL:AAEX03016748 Ensembl:ENSCAFT00000015166 Uniprot:F1PHT7
Length = 435
Score = 122 (48.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 86/386 (22%), Positives = 151/386 (39%)
Query: 221 EERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSN 280
EER G ++L+ A+ + E + G + +S + L + D S + +
Sbjct: 41 EER--QGGKSRLKSNEDSADSTQSREDSPSLGEDSAQDTTSESRDLDNEDEMNSSPERGD 98
Query: 281 ELMATESR---VNDLSNSDCHNGDGHT-ADWPLHKDSNHDTVQCMLPEKNGYHVRDAAVK 336
+ +ES+ V S D +GDG D + D + DT++ E+ + A+VK
Sbjct: 99 SVQESESKEHWVGGGSEGDSSHGDGSEFGDEEMQND-DPDTIR---NERGNSRMNSASVK 154
Query: 337 QAESLGESVKSMPFVPDGSEGTIN-PLDGSKRFKNLQNAP--GML--SGESQQVNSDKTA 391
ES G S + G ++ P R + G L S ++V SD T
Sbjct: 155 SEESKGNSDEQASTQDSGDSQSMEYPRRKIFRKSRISEEDDIGELDDSNTMEEVKSDSTE 214
Query: 392 -ASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGS 450
A+ T ++ ++ E+ S ED S++ D +N++ S
Sbjct: 215 NANSKETGLSQSRENSESESVEESEENQSQEDSQNIQDPSSESSQEVDLPSQENSSESQE 274
Query: 451 LVVVDADIHACPDAKDPKMLNIDVAHEETASVSINVL-KPCSYHTSDPHMSSPGHDN-SL 508
VV ++ D D + D E++ S N L KP S + + N SL
Sbjct: 275 EVVTESR----GDNPDNTTSHSD--QEDSDSSEENSLNKPSSSESESTEEQADSESNESL 328
Query: 509 AQNLQ-PLGVDLHSSERSKM--NQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDN 565
+ + P + +SS + + + AS + Q EE QSE+ S ++ED+
Sbjct: 329 RSSEESPESTEENSSSQEDLQSHSASAESQSEESQSEQDSQSEEDDASDSQDSSKLKEDS 388
Query: 566 GTLDEPLDNATASNNELKKLNNSITS 591
+ + + ++S E + N I S
Sbjct: 389 NSTE----SKSSSEEEGQSKNTEIES 410
Score = 56 (24.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 830 SKEPVALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAE 889
S+E A + ++ E S TES + + ++NT+ I S +V T N+P+ +
Sbjct: 370 SEEDDASDSQDSSKLKEDSNSTESKSSSEEEGQSKNTE----IESRKLIVDTYHNKPIGD 425
Query: 890 LNEMDVDRG 898
++ D G
Sbjct: 426 QDDNDCQDG 434
>UNIPROTKB|E1BL69 [details] [associations]
symbol:REC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0034991 "nuclear meiotic cohesin complex" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0001556
"oocyte maturation" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000778 "condensed nuclear chromosome
kinetochore" evidence=IEA] InterPro:IPR006909 InterPro:IPR006910
Pfam:PF04824 Pfam:PF04825 GO:GO:0000780 GO:GO:0007286 GO:GO:0001673
GO:GO:0001556 GO:GO:0000800 GO:GO:0007141 GO:GO:0007129
GO:GO:0030893 Gene3D:1.10.10.580 InterPro:IPR023093 CTD:9985
KO:K13054 GeneTree:ENSGT00390000011379 OMA:ARVFYLL
EMBL:DAAA02028032 IPI:IPI00712766 RefSeq:NP_001178217.1
UniGene:Bt.100955 Ensembl:ENSBTAT00000003504 GeneID:516291
KEGG:bta:516291 NextBio:20872182 Uniprot:E1BL69
Length = 587
Score = 108 (43.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 1 MFYSQFILAKK-GPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIL----------FPDV 49
MFY +L + G TIW+AA +L K + + ++ + + IL P
Sbjct: 1 MFYYPNVLQRHTGCFATIWLAATRGCRLVKREYLNVNVVKTCEEILNYVLVRVQPPLPGA 60
Query: 50 P---IALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYH 106
P +L LS+ L +GV+R+YS++ YL +D L ++ +A +D+ E+ P
Sbjct: 61 PRPRFSLYLSAQLQIGVIRVYSQQCQYLVEDIQHILERLHRAQLQIRIDMV--ETELP-- 116
Query: 107 SITLPE 112
S+ LP+
Sbjct: 117 SLLLPD 122
Score = 72 (30.4 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 1171 RAVSKYLQTLFVREPVQGRKVLALDHLLVGKTRKEASRMFFETLVLKTKDYIHVEQARPL 1230
RAV++ LQ REP V L R+ A+R+F+ LVL T+ + V+Q P
Sbjct: 522 RAVARELQA--DREPDFSSLVPPLS------PRRMAARVFYLLLVLATQQILRVKQEEPY 573
Query: 1231 DNINIKPGAK 1240
+ I+PG +
Sbjct: 574 GRLLIQPGPR 583
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 589 ITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLA 625
+ ++ P L VPE L P +L VE PE E+L+
Sbjct: 481 VEAEQPEAPVLPVVPE-LPEVPVELPVELPPEPELLS 516
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 223 RTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLSSGQKALASYDHFE-SEDQNSN- 280
R + + + ER E AE PS +++E SG ++S E +E++ +
Sbjct: 410 RRLPEELEEAEREAAAEEERRKAETPSDIEVLREAQEPSGPLMVSSELSLEVAEEEKTRI 469
Query: 281 ELMATESR 288
L+ E R
Sbjct: 470 SLVPPEER 477
Score = 37 (18.1 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 562 QEDNGTLDEP--LDNATASNNELKKL----NNSITSDLPAPEKLLSVPEGLLNKPNDLIV 615
+ED L E L + +ELK+ IT P+P L+ V E P +++
Sbjct: 226 EEDEAILLEERRLGRTRLAVDELKEEPWAPEREITVPPPSPLALVGVEEAAEPLPREVLA 285
Query: 616 ESTPEKEV 623
+ EV
Sbjct: 286 PEELKPEV 293
>UNIPROTKB|Q9NZW4 [details] [associations]
symbol:DSPP "Dentin sialophosphoprotein" species:9606 "Homo
sapiens" [GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005518 "collagen binding" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0001503 "ossification" evidence=TAS] GO:GO:0005578
GO:GO:0005509 GO:GO:0001501 GO:GO:0005518 eggNOG:NOG12793
GO:GO:0031214 GO:GO:0001503 GO:GO:0005201 EMBL:AF163151
EMBL:AC093895 EMBL:AF094508 IPI:IPI00872967 RefSeq:NP_055023.2
UniGene:Hs.678914 ProteinModelPortal:Q9NZW4 STRING:Q9NZW4
PhosphoSite:Q9NZW4 DMDM:215273974 PaxDb:Q9NZW4 PRIDE:Q9NZW4
Ensembl:ENST00000282478 Ensembl:ENST00000399271 GeneID:1834
KEGG:hsa:1834 UCSC:uc003hqu.3 CTD:1834 GeneCards:GC04P088529
HGNC:HGNC:3054 HPA:HPA036230 MIM:125420 MIM:125485 MIM:125490
MIM:125500 MIM:605594 neXtProt:NX_Q9NZW4 Orphanet:1653
Orphanet:166260 Orphanet:166265 PharmGKB:PA27507 HOVERGEN:HBG098252
OMA:ERESKVQ OrthoDB:EOG41RPVG GenomeRNAi:1834 NextBio:7491
PMAP-CutDB:A8MUI0 ArrayExpress:Q9NZW4 Bgee:Q9NZW4 CleanEx:HS_DSPP
Genevestigator:Q9NZW4 GermOnline:ENSG00000152591 GO:GO:0071460
Uniprot:Q9NZW4
Length = 1301
Score = 133 (51.9 bits), Expect = 0.00021, P = 0.00021
Identities = 96/489 (19%), Positives = 183/489 (37%)
Query: 185 GTAAGHGVSDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEY 244
G GH + +D + ++ ++ S+E ND AN D
Sbjct: 433 GNKVGHSNTGSDSNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDANSES----DNNSSSR 488
Query: 245 AEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSN-SDCHNGDGH 303
+A ++ S K D + D N+++ + ND ++ SD G
Sbjct: 489 GDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSD 548
Query: 304 TADWPLHKDSNH----DTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGTI 359
++D SN D+ + N D++ + +S S S +
Sbjct: 549 SSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSS 608
Query: 360 NPLDGSKRFKNLQNAPGMLSGESQQVNSD-KTAASLNCTNVTCDMQDL----NPETCPGS 414
+ D S + + ES +SD K+ +S + ++ + D D N S
Sbjct: 609 DSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDS 668
Query: 415 TNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDV 474
++ S D + +SN S + ++ S+++ S S D+D D+ + + D
Sbjct: 669 SDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDS 728
Query: 475 AHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDV 534
++ +S S N S +SD SS D+S + N SS+ S + +S D
Sbjct: 729 SNSSDSSDSSN--SSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS-D- 784
Query: 535 QGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLP 594
+ +D S+ S S S D + + + D N++ S+N ++S +SD
Sbjct: 785 SNDSSNSSD--SSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSS 842
Query: 595 APEKLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESL 654
+ + +D S+ + S D+ + +S + + ++S+ +S
Sbjct: 843 DSSDSSDGSDSDSSNRSDSS-NSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSS---DSS 898
Query: 655 NSSESFGVD 663
NSS+S D
Sbjct: 899 NSSDSDSSD 907
Score = 128 (50.1 bits), Expect = 0.00071, P = 0.00071
Identities = 87/472 (18%), Positives = 190/472 (40%)
Query: 193 SDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPG 252
SD+ S + + D+ S+ + S + + N ++ ++ + +++ +
Sbjct: 620 SDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSS 679
Query: 253 LVQEPNLSSGQKALASYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGH----TADWP 308
N S + S + ES D +S+ + S +D SNS+ + D ++D
Sbjct: 680 SSDSSNSSDSSDSSDSSNSSESSD-SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSS 738
Query: 309 LHKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGTINPLDGSKRF 368
DS+ + + + + ++S S S S + N D S
Sbjct: 739 NSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSS 798
Query: 369 KNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQ 428
+ ++ S +S +SD +++ + ++ + D D + + S++ S D +D
Sbjct: 799 NSSDSSNSSDSSDSSD-SSDSDSSNSSDSSNSSDSSDSSNSS--DSSDSSDSSDG-SDSD 854
Query: 429 ASNKKKSHNDAEVSDNAAGSGSLVVVDA-DIHACPDAKDPKMLNIDVAHEETASVSINVL 487
+SN+ S N ++ SD++ S S D+ D + ++ D + + + +++ S +
Sbjct: 855 SSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSS-NSSDSDSSDSSNSSD 913
Query: 488 KPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQS 547
S ++SD SS DNS + + SS+ S + +S +D S
Sbjct: 914 SSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNS--SDSSDS 971
Query: 548 EKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLL 607
S S S D + + + D D++ +SN+ ++S +SD + +
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSS-DSSDSSNSS-DSSDSSDSSDSSNSSDSSNSSDSSN 1029
Query: 608 NKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVESLNSSES 659
+ + +S+ + S D+ N +S ++S+ + +S +SS+S
Sbjct: 1030 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS 1081
Score = 125 (49.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 81/404 (20%), Positives = 160/404 (39%)
Query: 268 SYDHFESEDQNSNELMATESRVNDLSNSDCHNGDGHTADWPLHKDSNHDTVQCMLPEKNG 327
S D +S D + + + S ND SNS + +++D DS+ + N
Sbjct: 764 SSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNS 823
Query: 328 YHVRDAAVKQAESLGESVKSMPFVPDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVNS 387
+++ ++S S S D S+G+ + D S R + ++ S +S +
Sbjct: 824 SDSSNSS-DSSDSSNSSDSSDS--SDSSDGSDS--DSSNRSDSSNSSDSSDSSDSSNSSD 878
Query: 388 DKTAASLNCTNVTCDMQDLNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAG 447
++ N ++ + D D + + S++ S D +D +SN S + SDN+
Sbjct: 879 SSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDS-SD--SSNSSDSSESSNSSDNSNS 935
Query: 448 SGSLVVVDADIHACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNS 507
S S D+ + + D ++ +S S + S ++SD SS D+S
Sbjct: 936 SDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSS 995
Query: 508 LAQNLQPLGVDLHSSERS-KMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDNG 566
+ + SS+ S N + + +D S S S S D+
Sbjct: 996 DSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1055
Query: 567 TLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAG 626
+ D++ +S++ ++S +SD + E S + +D +S+ +
Sbjct: 1056 NSSDSSDSSDSSDSS-DSSDSSDSSD--SSESSDSSDSSNSSDSSDSS-DSSDSSDSSDS 1111
Query: 627 SGGVDAGNKLNSGKKRSYTESTITVESLNSSESFGVDRTKRNSE 670
S D+ + NS ++S+ + +S NSS+S + +S+
Sbjct: 1112 SDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSD 1155
Score = 121 (47.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 100/484 (20%), Positives = 185/484 (38%)
Query: 190 HGVSDADPQG-SVKPTTHWEQDNISERM---NEISEERTVND---GANQLERVGLDAEPI 242
H V + +G +K + + NI++ + NE E++ + G ++ G + I
Sbjct: 366 HAVGKSQDKGIEIKGPSSGNR-NITKEVGKGNEGKEDKGQHGMILGKGNVKTQG-EVVNI 423
Query: 243 EYAEAPSTPG-LVQEPNLSSGQKALASYDHFESED---QNSNELMATESRVNDLSNSDCH 298
E S PG V N S + YD ++ +D Q + + ES ND +NS+
Sbjct: 424 EGPGQKSEPGNKVGHSNTGSDSNS-DGYDSYDFDDKSMQGDDPNSSDESNGNDDANSESD 482
Query: 299 NGDGHTADWPLHKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGT 358
N D + D + D NG + A ++S ++ S S G
Sbjct: 483 NNSSSRGDASYNSDESKDN-------GNGSDSKGAEDDDSDSTSDTNNS------DSNGN 529
Query: 359 INPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQDLNPETCPGSTNMP 418
N +G+ + G S S +SD + +S + + D D N + S++
Sbjct: 530 GN--NGNDDNDKSDSGKGK-SDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSD 586
Query: 419 VSEDRLADYQ-ASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVAHE 477
S+ +D +SN S + ++ SD++ S S + D+ D + D +
Sbjct: 587 SSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKS-DSSDS 645
Query: 478 ETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASVDVQGE 537
++ S N S ++S+ SS D+S + + SS+ S + +S
Sbjct: 646 NSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSS 705
Query: 538 ECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNATASNNELKKLNNSITSDLPAPE 597
+ +D S S S S D N + N++ S++ N+S +SD
Sbjct: 706 DSSDSDSSDSSDSSNSNSS---DSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS 762
Query: 598 KLLSVPEGLLNKPNDLIVESTPEKEVLAGSGGVDAGNKLNSGKKRSYTESTITVES--LN 655
+ + + S+ + S D+ N +S ++S+ + +S N
Sbjct: 763 NSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSN 822
Query: 656 SSES 659
SS+S
Sbjct: 823 SSDS 826
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 55/330 (16%), Positives = 124/330 (37%)
Query: 792 DLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPA-ETSIQ 850
D S S S D SS+ +N S + + +G S N+ D+ + ++S
Sbjct: 819 DSSNSSDSSNSSD--SSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNS 876
Query: 851 TESHQGIDHQFGAQNTDAQGHINS-DTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCS 909
++S D + ++D+ NS D+D + + ++ + + +E ++ S
Sbjct: 877 SDSSDSSDSNESSNSSDSSDSSNSSDSD------SSDSSNSSDSSDSSNSSDSSESSNSS 930
Query: 910 VNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAK 969
N SS + +S + + D +N+ D+S D+ + D+ S
Sbjct: 931 DNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS-----NSSDS 985
Query: 970 MDNAKGVEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGADVETDRSVLTDA 1029
D++ + ++ D + N + +D + N +D +D S +D+
Sbjct: 986 SDSSDSSDSSDSSDSS--NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSD-SSDSSDSSDS 1042
Query: 1030 VNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNHMFSEEPVID 1089
++ + + ++ + D+S ++ + S+ +SN S + D
Sbjct: 1043 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSS-D 1101
Query: 1090 STNSVELGGDTINVSLDDGKSQVDLRSPMD 1119
S++S + + + D + D D
Sbjct: 1102 SSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1131
Score = 60 (26.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/179 (18%), Positives = 59/179 (32%)
Query: 141 QITLQDTMDGMAYSTSQFGLDERFGDGDASQMGXXXXXXXXXXKGTAAGHGVSDADPQGS 200
Q+++ D S + D+ +GD G G + D +
Sbjct: 139 QVSIIDNAGATNRSNTNGNTDKNTQNGDVGDAGHNEDVAVVQEDGPQVAGSNNSTDNEDE 198
Query: 201 VKPTTHWEQDNISERMNEISEERTVNDGANQLERVGLDAEPIEYAEAPSTPGLVQEPNLS 260
+ + + N SE +I+ +R A G DA +PS G ++ +
Sbjct: 199 IIENSCRNEGNTSEITPQINSKRNGTKEAEVTPGTGEDAGLDNSDGSPSGNGADEDEDEG 258
Query: 261 SGQKALASYDHFESEDQNSNELMATE-SRVNDLSNSDCHNGDGHTADWPLHKDSNHDTV 318
SG + + NS + + +D +S N D P K+ H+ V
Sbjct: 259 SGDDEDEEAGNGKDSSNNSKGQEGQDHGKEDDHDSSIGQNSDSKEYYDPEGKEDPHNEV 317
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 70/363 (19%), Positives = 149/363 (41%)
Query: 783 LTSVHCEIHDLSKISISETDKDHGSSEIANDIGCSI--APNVIE-GGKQGSKEPVALRNN 839
+ S H +D+ TD SE + C + P+ + K+ S A ++
Sbjct: 886 INSAHT--YDVQSGPSDITDGHRFESEFNSTHICDVQSGPSDMSVNSKRKSSIDSAQIDD 943
Query: 840 GDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDV-VKTVQNEPLAELNEMDVDRG 898
+ P++ SI ++ I+ AQ + Q SD + K + A+++ + +
Sbjct: 944 AQSDPSDISIGSKQEYSIN---SAQIDNVQSE-PSDISIGSKQESSINSAQIDNVQSEPS 999
Query: 899 NVEVAEEASCSVNHGFGTSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDA 958
N+ ++ + S+N S+Q D +E + K S +D V P +
Sbjct: 1000 NISISSKQETSIN-----STQIDDVQSEPSDISISSKNKLRINSAQIDDVQSAPSGISVS 1054
Query: 959 QPVEVGTSVAKMDNAKG-VEDTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGA 1017
E A++D+ + D + ++ +I + +T+ ++ + + G S N A
Sbjct: 1055 SEQETSIISAQVDDVQSEYSDISISSKHEPSINSTQTDDIQSEPIDISFGSKQESCINSA 1114
Query: 1018 ---DVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGK 1074
DV+++ S ++ + +TQE S+ + D+ D S + +++ +
Sbjct: 1115 QMYDVQSEPSDISIS-STQE-TSINSAQMYDVQLEPSDIS-ISFKDKPSINSSQVDDVQS 1171
Query: 1075 DPTSNHMFSE-EPVIDSTNSVELGGDTINVSLDDGKSQVDLRSP-MDDGRMEIEEVTIGN 1132
+P+ SE E I+S ++ + N+S K + + S M D + E +++I +
Sbjct: 1172 EPSDICFGSEQETCINSAQIYDVQSEPSNISFSS-KQETSINSTQMYDVQSEPSDISISS 1230
Query: 1133 DTE 1135
+ E
Sbjct: 1231 NQE 1233
Score = 94 (38.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 78/401 (19%), Positives = 151/401 (37%)
Query: 186 TAAGHGVSDADPQGSVKPTTHWEQDNISERMNEISEERTVNDGAN----QLERVGLDAEP 241
T G ++A Q T E+D +E +E +R + G ++E+ D EP
Sbjct: 373 TLEERGEAEAGDQQKAN-TDDGEEDK-AEAFSEKVVKRESDAGKEKAEAEVEKSVRDEEP 430
Query: 242 IEYAEAPSTPGLVQEPNLSSGQKALASYDHFESEDQNSN--ELMATESRVNDLSNSDCHN 299
+E S+ P ++GQK L S E++D N E+ E + L ++ N
Sbjct: 431 SSTSEQISS----SSPKQNTGQKRLRSSTDNEAKDDNQVKIEVEEVEKKKAKLGQNETDN 486
Query: 300 GDGHTADWPLHKDSNHDTVQCMLPEKNGYHVRDAAVKQAESLGESVKSMPFVPDGSEGTI 359
+ + + +T++ P +A + S + S E
Sbjct: 487 NEEQSVSAEPDDEKAEETMETDTPPPQQQECMEAEL----STSDPTSSSDITTQQREEES 542
Query: 360 NPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAA---SLNCTNVT-CDMQDLNPETCPGST 415
+ + S + N + L G+ + D T + +N ++T D+ D P T
Sbjct: 543 SDVTSSTQSINSVDEDVALGGDVASQSEDVTQSFVVQINPEDITPTDLTDAQPSNI---T 599
Query: 416 NMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAKDPKMLNIDVA 475
+ P S D A S + + +S G+ D+ I+ P + +I
Sbjct: 600 SHPCSSDIPATSFMSVSSSNFSKHSISFAYTCDGTTEPSDS-INLTPRVPSINVAHISDV 658
Query: 476 HEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLGVDLHSSERSKMNQASV-DV 534
E + + +++ + S +++ + + + +L + VD + +N + +V
Sbjct: 659 QPEPSDIIVSLKQNSSANST--------YTSDVQSDLSNVTVD--PEHKPSINSTHIINV 708
Query: 535 QGEECYLTDVMQSEKSQISGPSVCGDIQEDNGTLDEPLDNA 575
Q E +T + E S S P D+Q + EP +N+
Sbjct: 709 QSETSNITISSEHEPSISSTPM--SDVQSETSFKYEPGNNS 747
>FB|FBgn0003137 [details] [associations]
symbol:Ppn "Papilin" species:7227 "Drosophila melanogaster"
[GO:0005604 "basement membrane" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0004867
"serine-type endopeptidase inhibitor activity" evidence=IEA]
InterPro:IPR002223 InterPro:IPR007110 InterPro:IPR008197
InterPro:IPR010294 InterPro:IPR010909 InterPro:IPR013273
Pfam:PF00014 Pfam:PF05986 Pfam:PF08686 PRINTS:PR00759
PRINTS:PR01857 PROSITE:PS50279 PROSITE:PS50835 PROSITE:PS50900
PROSITE:PS51390 SMART:SM00131 SMART:SM00217 EMBL:AE014297
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
GO:GO:0008270 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0004222 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 eggNOG:NOG242665 GO:GO:0005201
HSSP:P12111 SUPFAM:SSF57256 GeneTree:ENSGT00700000104482
EMBL:AF205357 EMBL:AF529179 EMBL:AF529180 EMBL:BT011127
RefSeq:NP_001163760.1 RefSeq:NP_001163761.1 RefSeq:NP_788751.2
RefSeq:NP_788752.2 UniGene:Dm.7007 ProteinModelPortal:Q868Z9
SMR:Q868Z9 IntAct:Q868Z9 MINT:MINT-330923 STRING:Q868Z9
PaxDb:Q868Z9 EnsemblMetazoa:FBtr0301837 GeneID:43872
KEGG:dme:Dmel_CG33103 UCSC:CG33103-RA CTD:43872 FlyBase:FBgn0003137
InParanoid:Q868Z9 OMA:GCCPDNI OrthoDB:EOG4Q5748 PhylomeDB:Q868Z9
GenomeRNAi:43872 NextBio:836259 Bgee:Q868Z9 GermOnline:CG33103
Uniprot:Q868Z9
Length = 2898
Score = 133 (51.9 bits), Expect = 0.00050, P = 0.00050
Identities = 67/340 (19%), Positives = 132/340 (38%)
Query: 777 TGMSAELTSVH--CEIHDLSKISISETDKDHGSSEIANDIGCSIAPNVIEGGK-QGSKEP 833
+ +S++ TS + D S + + T+ G S+ + D+ S + E G+ +
Sbjct: 826 SSISSDATSEAPASSVSDSSDSTDASTETT-GVSDDSTDVSSSTEASASESTDVSGASDS 884
Query: 834 VALRNNGDTQPAETSIQTESHQGIDHQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEM 893
N D+ P E+S TE+ D +TD+ + ++ ++ + +++ N
Sbjct: 885 TGSTNASDSTP-ESS--TEASSSTD-----DSTDSSDNSSNVSESSTEASSSSVSDSN-- 934
Query: 894 DVDRGNVEVAEEASCSVNHGFGTSSQT-DVASAEVCNQPTGDKTNTVDASLLVDTVCLTP 952
D G+ + +S + N TS T D ++ T D+T D+ T
Sbjct: 935 DSSDGSTDGV--SSTTENSSDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDS---TE 989
Query: 953 EPTVDAQPVEVGTSVAKMDNAKGVEDTEVIDRNIEN-IVAVETEAKGTDGVLVEEGKVGV 1011
T+DA +S ++ + + + + + + ++ TD +
Sbjct: 990 SSTLDASSTTDASSTSESSSESSTDGSSTTSNSASSETTGLSSDGSTTDATTAASDNTDI 1049
Query: 1012 SVENGADVETDRSVLTDAVNTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLA-GDWG 1070
+ + D TD S + EG S +T + ++G + DG G
Sbjct: 1050 TTDGSTDESTDGSSNASTEGSTEGASEDTTISTE---SSGSTESTDAIASDGSTTEGSTV 1106
Query: 1071 SNGKDPTSNHMFSEEPVIDSTNSVELGGDTINVSLDDGKS 1110
+ TS+ + S+ + DS+ S E+ G T + S DG S
Sbjct: 1107 EDLSSSTSSDVTSDSTITDSSPSTEVSGSTDSSSSTDGSS 1146
>UNIPROTKB|Q939N5 [details] [associations]
symbol:gspB "Platelet binding protein GspB" species:1302
"Streptococcus gordonii" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00746 GO:GO:0005618 GO:GO:0005576
InterPro:IPR019948 InterPro:IPR019931 TIGRFAMs:TIGR01167
PROSITE:PS50847 EMBL:AY028381 PDB:3QC5 PDB:3QC6 PDB:4I8E
PDBsum:3QC5 PDBsum:3QC6 PDBsum:4I8E IntAct:Q939N5
InterPro:IPR022263 InterPro:IPR026465 TIGRFAMs:TIGR03715
TIGRFAMs:TIGR04224 Uniprot:Q939N5
Length = 3072
Score = 133 (51.9 bits), Expect = 0.00053, P = 0.00053
Identities = 123/722 (17%), Positives = 242/722 (33%)
Query: 333 AAVKQAESLGESVKSMPFVPDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVN-SDKTA 391
A+V +ES S + +++ + + ++ + + S + S T+
Sbjct: 2255 ASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTS 2314
Query: 392 ASLNCTNVTCDMQDLNPETCPG-STNMPVSEDRLADYQASNKKKSHNDAEVS--DNAAGS 448
AS++ + ++ T S ++ SE S+ + + A VS ++A+ S
Sbjct: 2315 ASVSASESASTSASVSASTSASTSASVSASESASTSASVSSSESASTSASVSASESASTS 2374
Query: 449 GSLVVVD-ADIHACPDAKDPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNS 507
S+ + A A A + + V+ E+AS S +V S TS +S S
Sbjct: 2375 ASVSASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESASTS 2434
Query: 508 LAQNLQPLGVDLHSSERSKMNQASVDVQGEECYLTDVMQSEKSQIS-GPSVCGDIQEDNG 566
+ + S S+ S V E T S + S SV
Sbjct: 2435 ASVSASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESASTS 2494
Query: 567 TLDEPLDNATASNNELKKLNNSITSDLPAPEKLLSVPEGLLNKPNDLIVESTPEKEVLAG 626
++A+ S + + S ++ + A E S + + S E +
Sbjct: 2495 ASVSASESASTSASVSASTSASTSASVSASESA-STSASVSASESASTSASVSASESAST 2553
Query: 627 SGGVDAGNKLNSGKKRSYTESTITVESLNSSESFGVDRTKRNSEFIPXXXXXXXXILVGR 686
S V A ++ S +ES T S+++SES + SE +
Sbjct: 2554 SASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASMSAST 2613
Query: 687 KSSVLKMKPTPP-----VREVASRKRARSASQTNALKRKVLMDDTMVLHGDVIRQQLTNT 741
+SV + T E AS + SAS++ + V ++ V + +T
Sbjct: 2614 SASVSVSESTSTSASVSANESASTSASVSASESASTSASVSASESASTSASVSASESAST 2673
Query: 742 EDIRRIRKKAPCTGPEILMIQMQFLEDDIFNEPIFTGMSAELT-SVHCEIHDLSKISISE 800
+ A + + E + + SA + SV + S+S
Sbjct: 2674 SASVSASESASTSA------SVSASESASTSASVSASESASTSASVSASESASTSASVSA 2727
Query: 801 TDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGIDHQ 860
++ S+ ++ S + +V + V+ + T + ++ ++ S
Sbjct: 2728 SESASTSASVSASESASTSASVSASTSASTSASVSANESASTSASVSASESASTSASVSA 2787
Query: 861 FGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSVNHGFGTSSQT 920
+ +T A + +V A + V + + AS S N TS+
Sbjct: 2788 SESASTSASVSASESASTSASVSASESASTSA-SVS-ASTSASTSASVSANESASTSASV 2845
Query: 921 DVA-SAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKGVEDT 979
+ SA + ++ + AS+ T ++ SV+ +A
Sbjct: 2846 SASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASTSASTSASV 2905
Query: 980 EVIDRNIENIVAVETEAKGTDGVLV--EEGKVGVSVENGADVETDRSV-LTDAVNTQEGV 1036
+ + A +E+ T + E SV T SV +++ +T V
Sbjct: 2906 SASESASTSASASASESASTSASVSASESASTSASVSASESASTSASVSASESASTNASV 2965
Query: 1037 SL 1038
S+
Sbjct: 2966 SV 2967
>CGD|CAL0004905 [details] [associations]
symbol:IFF6 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0009986 "cell surface"
evidence=ISS;IDA] [GO:0009277 "fungal-type cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005937 "mating
projection" evidence=IEA] [GO:0000753 "cell morphogenesis involved
in conjugation with cellular fusion" evidence=IEA] CGD:CAL0004905
GO:GO:0009986 GO:GO:0009277 EMBL:AACQ01000107 InterPro:IPR021031
Pfam:PF11765 RefSeq:XP_714246.1 GeneID:3644087 KEGG:cal:CaO19.4072
Uniprot:Q59XL0
Length = 1086
Score = 104 (41.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 63/290 (21%), Positives = 100/290 (34%)
Query: 799 SETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGID 858
++T+ D S ++ G + + + G+ E N G T+ + + S D
Sbjct: 609 TDTNTDATDSSTVSETGATDSSTATDTNT-GATESSTDSNTGATESSTATDTNTSATNTD 667
Query: 859 HQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSV---NHGFG 915
G+ NT N+ TD T N + + + G E + S S N G
Sbjct: 668 TNTGS-NTATNTDDNTATDTSSTETNTA-TNTDGTETNTGATETNTDTSASNTDDNTGSN 725
Query: 916 TSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKG 975
T++ T G TNT + DT T T + T+ A N G
Sbjct: 726 TATNTGGTDTNTDTNTGGTDTNTGTNTGGTDTKTGTNTATGNNTGA-TETNTATNTNGNG 784
Query: 976 VE-DTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGA----DVETDRSVLTDAV 1030
+T D T TD G +V N A +V T + +
Sbjct: 785 TNTNTGATDTATNTATGTNTNTGATD--TNTNTNTGATVTNTATNTDNVSTTKDI-PSPT 841
Query: 1031 NTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNH 1080
+T EG + G N + NG + + G +GD +NG S++
Sbjct: 842 STNEGSNNGGGSNNGSGSNNGSGNESGSGSGSGNGSGDGSNNGSGNGSDN 891
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 56/328 (17%), Positives = 118/328 (35%)
Query: 346 KSMPFVPDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQD 405
K +P P G++ + + L S ++ +A + + E+ +S + ++S + + T +
Sbjct: 335 KYVPPSP-GTDESSSSLSSSTSEQSSSSATSVSASETSDTSSTQESSSSSEVSSTQEPSS 393
Query: 406 LNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAK 465
PE S E + +S+ S +A S+++ S + + +
Sbjct: 394 STPEPSSSSETSSTQESSSTEGPSSSTDSS-TEASSSESSTAPSSSTEASSSTESSTEEP 452
Query: 466 DPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLG-----VDLH 520
+ E ++S + +P S P + P D+
Sbjct: 453 SSSTEGPSSSQESSSSEESSTQEPSSSTKESSSTEGPSSTEESSSTEGPSSSTDSSTDIT 512
Query: 521 S-SERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDN-GTLDEPLDNATAS 578
S S + + + E D +S+ S + S D N T E D++TA+
Sbjct: 513 SASSTDEQSSSGTGQSSTEDEPIDSTESDTSSATDSSTATDSSATNTDTNSESTDSSTAT 572
Query: 579 NNELKKLN--NSITSDLPAPEKLLSVPEGLLNKPN--DLIVESTPEKEVLAGSGGVDAGN 634
+ N +S ++ + G D ++T + ++ +G D+
Sbjct: 573 DTSSTDSNTASSTETNTDVTDSSTDSNTGATESSTATDTNTDAT-DSSTVSETGATDSST 631
Query: 635 KL--NSGKKRSYTES-TITVESLNSSES 659
N+G S T+S T ES ++++
Sbjct: 632 ATDTNTGATESSTDSNTGATESSTATDT 659
>UNIPROTKB|Q59XL0 [details] [associations]
symbol:IFF6 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009277 "fungal-type cell
wall" evidence=IDA] [GO:0009986 "cell surface" evidence=ISS;IDA]
CGD:CAL0004905 GO:GO:0009986 GO:GO:0009277 EMBL:AACQ01000107
InterPro:IPR021031 Pfam:PF11765 RefSeq:XP_714246.1 GeneID:3644087
KEGG:cal:CaO19.4072 Uniprot:Q59XL0
Length = 1086
Score = 104 (41.7 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 63/290 (21%), Positives = 100/290 (34%)
Query: 799 SETDKDHGSSEIANDIGCSIAPNVIEGGKQGSKEPVALRNNGDTQPAETSIQTESHQGID 858
++T+ D S ++ G + + + G+ E N G T+ + + S D
Sbjct: 609 TDTNTDATDSSTVSETGATDSSTATDTNT-GATESSTDSNTGATESSTATDTNTSATNTD 667
Query: 859 HQFGAQNTDAQGHINSDTDVVKTVQNEPLAELNEMDVDRGNVEVAEEASCSV---NHGFG 915
G+ NT N+ TD T N + + + G E + S S N G
Sbjct: 668 TNTGS-NTATNTDDNTATDTSSTETNTA-TNTDGTETNTGATETNTDTSASNTDDNTGSN 725
Query: 916 TSSQTDVASAEVCNQPTGDKTNTVDASLLVDTVCLTPEPTVDAQPVEVGTSVAKMDNAKG 975
T++ T G TNT + DT T T + T+ A N G
Sbjct: 726 TATNTGGTDTNTDTNTGGTDTNTGTNTGGTDTKTGTNTATGNNTGA-TETNTATNTNGNG 784
Query: 976 VE-DTEVIDRNIENIVAVETEAKGTDGVLVEEGKVGVSVENGA----DVETDRSVLTDAV 1030
+T D T TD G +V N A +V T + +
Sbjct: 785 TNTNTGATDTATNTATGTNTNTGATD--TNTNTNTGATVTNTATNTDNVSTTKDI-PSPT 841
Query: 1031 NTQEGVSLETGGYNDLAAANGDNSRLEVRNEDGPLAGDWGSNGKDPTSNH 1080
+T EG + G N + NG + + G +GD +NG S++
Sbjct: 842 STNEGSNNGGGSNNGSGSNNGSGNESGSGSGSGNGSGDGSNNGSGNGSDN 891
Score = 76 (31.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 56/328 (17%), Positives = 118/328 (35%)
Query: 346 KSMPFVPDGSEGTINPLDGSKRFKNLQNAPGMLSGESQQVNSDKTAASLNCTNVTCDMQD 405
K +P P G++ + + L S ++ +A + + E+ +S + ++S + + T +
Sbjct: 335 KYVPPSP-GTDESSSSLSSSTSEQSSSSATSVSASETSDTSSTQESSSSSEVSSTQEPSS 393
Query: 406 LNPETCPGSTNMPVSEDRLADYQASNKKKSHNDAEVSDNAAGSGSLVVVDADIHACPDAK 465
PE S E + +S+ S +A S+++ S + + +
Sbjct: 394 STPEPSSSSETSSTQESSSTEGPSSSTDSS-TEASSSESSTAPSSSTEASSSTESSTEEP 452
Query: 466 DPKMLNIDVAHEETASVSINVLKPCSYHTSDPHMSSPGHDNSLAQNLQPLG-----VDLH 520
+ E ++S + +P S P + P D+
Sbjct: 453 SSSTEGPSSSQESSSSEESSTQEPSSSTKESSSTEGPSSTEESSSTEGPSSSTDSSTDIT 512
Query: 521 S-SERSKMNQASVDVQGEECYLTDVMQSEKSQISGPSVCGDIQEDN-GTLDEPLDNATAS 578
S S + + + E D +S+ S + S D N T E D++TA+
Sbjct: 513 SASSTDEQSSSGTGQSSTEDEPIDSTESDTSSATDSSTATDSSATNTDTNSESTDSSTAT 572
Query: 579 NNELKKLN--NSITSDLPAPEKLLSVPEGLLNKPN--DLIVESTPEKEVLAGSGGVDAGN 634
+ N +S ++ + G D ++T + ++ +G D+
Sbjct: 573 DTSSTDSNTASSTETNTDVTDSSTDSNTGATESSTATDTNTDAT-DSSTVSETGATDSST 631
Query: 635 KL--NSGKKRSYTES-TITVESLNSSES 659
N+G S T+S T ES ++++
Sbjct: 632 ATDTNTGATESSTDSNTGATESSTATDT 659
>UNIPROTKB|G5EHS1 [details] [associations]
symbol:MGCH7_ch7g423 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006909
InterPro:IPR006910 Pfam:PF04824 Pfam:PF04825 EMBL:CM000230
EMBL:CM001237 GO:GO:0000228 Gene3D:1.10.10.580 InterPro:IPR023093
RefSeq:XP_003721082.1 EnsemblFungi:MGG_02688T0 GeneID:2682695
KEGG:mgr:MGG_02688 Uniprot:G5EHS1
Length = 712
Score = 131 (51.2 bits), Expect = 0.00099, Sum P(3) = 0.00098
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 1 MFYSQFIL-AKKGPLGTIWIAAHLERKLRKNQV---ADTDIGVSVDSILF---PDVPIAL 53
MFYS IL ++K + T+W+ A L+R +V A ++ V + P PIAL
Sbjct: 1 MFYSHEILTSQKHGVATVWVLATLDRSCASRKVSRKAIQEVNVPKACVTIDEPPGAPIAL 60
Query: 54 RLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRST-AVDLPPEESTAPYHSITL-- 110
RL + LL GV R+Y ++ +Y+ D + + ++ R + L P A + +
Sbjct: 61 RLQASLLYGVSRVYQQQCHYVLGDAEKFRISMRGLMRVLDSGTLDPNAGRAKKKQLMIQD 120
Query: 111 -PETFDLDDFELPDNDIFQ-GN 130
PE + F+LP D+ + GN
Sbjct: 121 DPEFHISNFFDLPPLDLDELGN 142
Score = 45 (20.9 bits), Expect = 0.00099, Sum P(3) = 0.00098
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 1203 RKEASRMFFETLVLKTKDYIHVEQARPLDNINIKPGAKL 1241
R A+ F++ L L T I V+Q D NI P K+
Sbjct: 626 RFNAASAFYQLLCLSTNRTIKVDQ-EGRDRNNIFPFGKI 663
Score = 42 (19.8 bits), Expect = 0.00099, Sum P(3) = 0.00098
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 187 AAGHGVSDADPQGSVKPTTHWEQDNISERMNEISEE 222
+AG G D P +P H+++D + + IS E
Sbjct: 553 SAGMGSVDDHPPD--QPDFHFQEDPANHNSSSISTE 586
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1246 1212 0.00098 123 3 11 23 0.37 35
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 619 (66 KB)
Total size of DFA: 497 KB (2230 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 116.94u 0.10s 117.04t Elapsed: 00:00:06
Total cpu time: 116.96u 0.10s 117.06t Elapsed: 00:00:06
Start: Tue May 21 17:49:41 2013 End: Tue May 21 17:49:47 2013