Query 000872
Match_columns 1245
No_of_seqs 555 out of 4607
Neff 8.5
Searched_HMMs 46136
Date Tue Apr 2 00:32:33 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000872.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000872hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 5E-192 1E-196 1739.4 88.6 1181 1-1245 143-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 8E-185 2E-189 1808.3 127.8 1240 1-1245 193-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 7E-163 1E-167 1611.4 121.8 1179 1-1243 89-1392(1394)
4 KOG0061 Transporter, ABC super 100.0 8.7E-95 1.9E-99 885.4 56.0 556 672-1245 22-612 (613)
5 PLN03211 ABC transporter G-25; 100.0 2.8E-91 6.1E-96 864.2 62.5 559 672-1242 36-659 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 2.7E-91 5.8E-96 867.8 58.5 543 700-1245 37-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 4.5E-88 9.8E-93 896.7 61.3 565 673-1242 27-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 5.9E-87 1.3E-91 880.2 58.6 568 672-1241 128-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 3.8E-82 8.1E-87 774.6 38.3 542 699-1243 126-732 (1391)
10 KOG0061 Transporter, ABC super 100.0 3.4E-70 7.4E-75 668.8 50.9 548 1-596 58-608 (613)
11 KOG0054 Multidrug resistance-a 100.0 7.1E-71 1.5E-75 695.9 45.9 739 1-888 549-1335(1381)
12 TIGR00955 3a01204 The Eye Pigm 100.0 1.2E-69 2.5E-74 674.1 54.9 551 1-595 53-612 (617)
13 PLN03211 ABC transporter G-25; 100.0 2E-68 4.4E-73 660.6 55.8 547 1-595 96-657 (659)
14 KOG0055 Multidrug/pheromone ex 100.0 5.2E-69 1.1E-73 661.7 42.2 193 672-888 984-1186(1228)
15 TIGR01257 rim_protein retinal- 100.0 2.3E-64 4.9E-69 663.9 64.8 201 675-897 1937-2139(2272)
16 PLN03130 ABC transporter C fam 100.0 4.6E-64 1E-68 673.5 47.6 195 675-897 1237-1441(1622)
17 PLN03232 ABC transporter C fam 100.0 5.2E-63 1.1E-67 664.7 44.6 195 675-897 1234-1438(1495)
18 TIGR00957 MRP_assoc_pro multi 100.0 7.1E-62 1.5E-66 654.6 46.6 195 675-897 1284-1488(1522)
19 COG1123 ATPase components of v 100.0 3.5E-60 7.7E-65 548.2 42.4 444 1-897 37-499 (539)
20 PTZ00243 ABC transporter; Prov 100.0 2.1E-59 4.6E-64 628.1 51.1 196 674-897 1307-1513(1560)
21 TIGR01271 CFTR_protein cystic 100.0 3E-59 6.6E-64 626.9 52.5 195 674-897 1216-1420(1490)
22 PTZ00265 multidrug resistance 100.0 7.2E-60 1.6E-64 627.2 45.6 200 675-897 1165-1427(1466)
23 PRK13549 xylose transporter AT 100.0 1.2E-59 2.5E-64 575.3 40.2 190 701-897 275-474 (506)
24 PRK10762 D-ribose transporter 100.0 1.5E-59 3.3E-64 573.6 40.9 187 703-897 267-464 (501)
25 PRK09700 D-allose transporter 100.0 1.2E-59 2.5E-64 576.4 39.3 187 703-897 278-478 (510)
26 PRK10261 glutathione transport 100.0 9E-59 1.9E-63 577.3 44.5 211 675-897 313-533 (623)
27 PRK15439 autoinducer 2 ABC tra 100.0 3E-59 6.6E-64 570.9 39.4 187 703-897 278-472 (510)
28 TIGR03269 met_CoM_red_A2 methy 100.0 1.6E-58 3.5E-63 567.7 42.7 202 676-897 280-497 (520)
29 PRK15134 microcin C ABC transp 100.0 1.3E-58 2.9E-63 569.0 41.6 187 701-897 299-495 (529)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-58 2.5E-63 566.8 40.6 190 701-897 273-472 (500)
31 PRK11288 araG L-arabinose tran 100.0 2.4E-58 5.2E-63 563.0 39.3 188 702-897 267-465 (501)
32 PRK10982 galactose/methyl gala 100.0 1.5E-57 3.1E-62 555.3 38.7 189 1-231 26-219 (491)
33 PRK10938 putative molybdenum t 100.0 1.1E-56 2.4E-61 547.9 37.2 194 675-888 260-463 (490)
34 COG4172 ABC-type uncharacteriz 100.0 2.8E-54 6E-59 465.8 36.9 430 2-888 39-488 (534)
35 PRK11819 putative ABC transpor 100.0 1.3E-53 2.7E-58 526.3 43.9 186 675-897 324-511 (556)
36 PRK15064 ABC transporter ATP-b 100.0 2.1E-53 4.5E-58 523.1 42.4 183 675-897 319-504 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-52 2.4E-57 518.1 47.3 186 675-897 322-509 (552)
38 PRK13409 putative ATPase RIL; 100.0 4.3E-53 9.2E-58 517.7 36.8 183 675-897 340-523 (590)
39 PRK10636 putative ABC transpor 100.0 4.4E-51 9.5E-56 508.4 43.1 182 675-897 312-496 (638)
40 PRK11147 ABC transporter ATPas 100.0 9.3E-51 2E-55 507.3 44.4 186 675-897 319-506 (635)
41 COG0488 Uup ATPase components 100.0 3.4E-51 7.4E-56 485.8 37.0 202 2-233 32-238 (530)
42 COG1129 MglA ABC-type sugar tr 100.0 1.1E-50 2.3E-55 466.7 36.4 421 1-897 36-470 (500)
43 COG3845 ABC-type uncharacteriz 100.0 4.3E-48 9.3E-53 433.7 35.7 425 1-897 32-472 (501)
44 PLN03073 ABC transporter F fam 100.0 7.3E-48 1.6E-52 479.2 40.4 185 675-897 508-693 (718)
45 COG1126 GlnQ ABC-type polar am 100.0 1.8E-42 3.8E-47 348.8 15.5 203 1-255 30-237 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 5.6E-41 1.2E-45 338.0 20.1 191 676-888 3-197 (240)
47 KOG0927 Predicted transporter 100.0 6.1E-40 1.3E-44 368.3 24.2 176 675-887 389-566 (614)
48 COG1135 AbcC ABC-type metal io 100.0 3.7E-40 8.1E-45 349.1 16.7 207 1-258 34-246 (339)
49 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.9E-39 1.1E-43 341.4 22.8 202 675-898 4-209 (254)
50 COG1136 SalX ABC-type antimicr 100.0 6.7E-39 1.4E-43 335.8 22.9 186 701-898 18-212 (226)
51 COG1116 TauB ABC-type nitrate/ 100.0 4.8E-39 1E-43 335.7 21.2 197 675-897 3-200 (248)
52 COG1131 CcmA ABC-type multidru 100.0 1.4E-38 3.1E-43 357.6 22.9 187 700-897 17-206 (293)
53 COG1125 OpuBA ABC-type proline 100.0 5.1E-39 1.1E-43 329.5 16.6 194 1-235 29-225 (309)
54 COG1118 CysA ABC-type sulfate/ 100.0 5.7E-39 1.2E-43 338.9 16.2 192 1-233 30-225 (345)
55 COG1135 AbcC ABC-type metal io 100.0 2.7E-38 5.8E-43 335.0 19.8 195 676-888 2-203 (339)
56 COG3839 MalK ABC-type sugar tr 100.0 1.1E-38 2.3E-43 354.2 16.8 190 2-234 32-222 (338)
57 COG1116 TauB ABC-type nitrate/ 100.0 1.9E-38 4.1E-43 331.3 16.4 177 1-222 31-207 (248)
58 COG2884 FtsE Predicted ATPase 100.0 4.7E-38 1E-42 309.0 17.6 177 701-887 15-197 (223)
59 COG1120 FepC ABC-type cobalami 100.0 5.4E-38 1.2E-42 335.6 18.5 202 675-897 2-208 (258)
60 COG1127 Ttg2A ABC-type transpo 100.0 5.1E-38 1.1E-42 321.7 15.9 193 1-235 36-235 (263)
61 COG4555 NatA ABC-type Na+ tran 100.0 3.7E-38 8E-43 312.1 14.1 191 1-235 30-222 (245)
62 COG3842 PotA ABC-type spermidi 100.0 2.9E-38 6.3E-43 352.6 14.9 206 1-256 33-239 (352)
63 COG1120 FepC ABC-type cobalami 100.0 3.2E-38 7E-43 337.3 14.2 195 1-234 30-227 (258)
64 COG1117 PstB ABC-type phosphat 100.0 2E-37 4.4E-42 310.1 18.4 195 675-888 7-209 (253)
65 COG1127 Ttg2A ABC-type transpo 100.0 2.3E-37 4.9E-42 317.0 19.1 200 675-897 8-215 (263)
66 COG3840 ThiQ ABC-type thiamine 100.0 7.3E-38 1.6E-42 304.5 14.6 190 1-233 27-217 (231)
67 COG1131 CcmA ABC-type multidru 100.0 1.5E-37 3.2E-42 349.4 19.1 194 1-237 33-228 (293)
68 TIGR01257 rim_protein retinal- 100.0 1.4E-32 3.1E-37 364.0 67.2 201 674-897 927-1129(2272)
69 COG1125 OpuBA ABC-type proline 100.0 3.1E-37 6.8E-42 316.4 17.9 198 676-897 2-205 (309)
70 COG1117 PstB ABC-type phosphat 100.0 3E-37 6.5E-42 308.9 14.7 206 1-254 35-248 (253)
71 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.6E-37 1.2E-41 325.7 17.2 193 1-234 32-226 (254)
72 COG3839 MalK ABC-type sugar tr 100.0 1.5E-36 3.2E-41 337.2 21.1 199 675-897 3-203 (338)
73 COG3638 ABC-type phosphate/pho 100.0 1.3E-36 2.9E-41 310.5 18.1 204 675-898 3-218 (258)
74 COG1136 SalX ABC-type antimicr 100.0 1E-36 2.2E-41 319.4 17.5 180 1-224 33-220 (226)
75 COG1118 CysA ABC-type sulfate/ 100.0 1E-36 2.2E-41 321.8 17.4 190 699-897 13-207 (345)
76 COG3638 ABC-type phosphate/pho 100.0 1.1E-36 2.4E-41 311.1 16.8 200 1-235 32-237 (258)
77 COG4555 NatA ABC-type Na+ tran 100.0 7.8E-37 1.7E-41 302.7 14.5 185 702-897 16-202 (245)
78 COG3842 PotA ABC-type spermidi 100.0 2.9E-36 6.4E-41 336.6 19.7 200 675-897 5-206 (352)
79 PRK13537 nodulation ABC transp 100.0 1.8E-35 3.9E-40 336.2 24.9 199 675-897 7-207 (306)
80 TIGR00960 3a0501s02 Type II (G 100.0 3.8E-35 8.2E-40 319.1 23.5 200 676-897 2-207 (216)
81 KOG0062 ATPase component of AB 100.0 2.5E-35 5.3E-40 329.6 21.6 195 674-908 361-555 (582)
82 TIGR02314 ABC_MetN D-methionin 100.0 6.8E-35 1.5E-39 333.4 25.1 202 676-897 2-210 (343)
83 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-35 2.7E-40 342.6 18.9 191 1-234 32-223 (356)
84 cd03261 ABC_Org_Solvent_Resist 100.0 7E-35 1.5E-39 321.2 23.3 198 677-897 2-206 (235)
85 PRK11650 ugpC glycerol-3-phosp 100.0 7.8E-35 1.7E-39 336.1 24.4 200 675-897 3-204 (356)
86 PRK11432 fbpC ferric transport 100.0 2.2E-35 4.7E-40 339.5 18.9 191 1-234 34-225 (351)
87 PRK11432 fbpC ferric transport 100.0 1.2E-34 2.7E-39 333.3 25.0 199 675-897 6-206 (351)
88 TIGR02314 ABC_MetN D-methionin 100.0 2.9E-35 6.2E-40 336.5 19.3 190 1-233 33-228 (343)
89 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-34 2.5E-39 334.3 24.5 199 675-897 4-204 (353)
90 TIGR03258 PhnT 2-aminoethylpho 100.0 2.6E-35 5.7E-40 339.8 18.9 192 1-234 33-227 (362)
91 TIGR03265 PhnT2 putative 2-ami 100.0 2.6E-35 5.6E-40 339.6 18.8 191 1-234 32-223 (353)
92 KOG0058 Peptide exporter, ABC 100.0 1.3E-35 2.8E-40 347.9 16.0 194 673-888 463-664 (716)
93 COG1124 DppF ABC-type dipeptid 100.0 2.6E-35 5.7E-40 304.0 16.4 190 2-235 36-231 (252)
94 TIGR01186 proV glycine betaine 100.0 3.8E-35 8.2E-40 337.1 19.2 191 1-234 21-218 (363)
95 TIGR03258 PhnT 2-aminoethylpho 100.0 1.7E-34 3.6E-39 333.2 24.5 199 675-897 5-208 (362)
96 cd03259 ABC_Carb_Solutes_like 100.0 1.5E-34 3.3E-39 313.7 22.8 186 701-897 13-200 (213)
97 PRK13537 nodulation ABC transp 100.0 4.3E-35 9.4E-40 333.1 19.1 191 1-235 35-227 (306)
98 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.7E-34 3.7E-39 314.6 22.9 200 677-897 2-209 (218)
99 cd03269 ABC_putative_ATPase Th 100.0 2E-34 4.3E-39 312.1 22.9 185 701-897 13-197 (210)
100 TIGR01188 drrA daunorubicin re 100.0 1.1E-34 2.3E-39 330.6 21.5 187 700-897 5-193 (302)
101 PRK13536 nodulation factor exp 100.0 3.1E-34 6.7E-39 329.0 25.4 199 675-897 41-241 (340)
102 COG1122 CbiO ABC-type cobalt t 100.0 4.3E-35 9.3E-40 314.6 17.2 190 2-234 33-227 (235)
103 cd03234 ABCG_White The White s 100.0 3E-34 6.6E-39 314.0 24.1 208 676-897 4-213 (226)
104 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.2E-34 6.9E-39 312.6 24.1 184 701-897 17-201 (220)
105 PRK09452 potA putrescine/sperm 100.0 4.8E-35 1E-39 338.7 18.7 190 1-233 42-232 (375)
106 COG2884 FtsE Predicted ATPase 100.0 5.5E-35 1.2E-39 287.4 16.1 185 1-229 30-220 (223)
107 COG1245 Predicted ATPase, RNas 100.0 9.6E-34 2.1E-38 311.2 27.0 161 703-888 356-517 (591)
108 PRK10851 sulfate/thiosulfate t 100.0 3.6E-34 7.7E-39 330.2 24.6 202 675-897 2-206 (353)
109 TIGR02673 FtsE cell division A 100.0 4.1E-34 8.9E-39 310.7 23.5 199 676-897 2-206 (214)
110 PRK09452 potA putrescine/sperm 100.0 4.3E-34 9.4E-39 330.8 25.0 199 675-897 14-214 (375)
111 cd03292 ABC_FtsE_transporter F 100.0 3.8E-34 8.2E-39 311.1 23.1 186 701-897 14-205 (214)
112 TIGR01288 nodI ATP-binding ABC 100.0 4.7E-34 1E-38 325.5 24.7 199 675-897 4-204 (303)
113 cd03265 ABC_DrrA DrrA is the A 100.0 4.2E-34 9.2E-39 311.7 23.2 197 677-897 2-201 (220)
114 cd03301 ABC_MalK_N The N-termi 100.0 5E-34 1.1E-38 309.8 23.5 197 677-897 2-200 (213)
115 COG1137 YhbG ABC-type (unclass 100.0 1.5E-35 3.2E-40 293.4 10.4 192 1-234 32-227 (243)
116 COG0411 LivG ABC-type branched 100.0 4E-35 8.6E-40 303.1 13.9 204 1-235 32-239 (250)
117 cd03266 ABC_NatA_sodium_export 100.0 4.1E-34 9E-39 311.6 22.7 202 676-897 2-205 (218)
118 PRK11607 potG putrescine trans 100.0 7.8E-34 1.7E-38 329.4 26.0 199 675-897 19-219 (377)
119 COG4175 ProV ABC-type proline/ 100.0 3.9E-35 8.5E-40 309.5 13.6 192 1-235 56-254 (386)
120 TIGR01188 drrA daunorubicin re 100.0 1.3E-34 2.8E-39 329.9 18.7 191 1-235 21-213 (302)
121 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-34 2.7E-39 282.0 15.6 181 706-897 17-199 (231)
122 cd03296 ABC_CysA_sulfate_impor 100.0 8.9E-34 1.9E-38 313.1 24.6 202 675-897 2-206 (239)
123 cd03219 ABC_Mj1267_LivG_branch 100.0 6.5E-34 1.4E-38 314.1 23.4 189 701-897 13-212 (236)
124 PRK11000 maltose/maltodextrin 100.0 6.8E-34 1.5E-38 330.7 24.6 199 675-897 3-203 (369)
125 TIGR01186 proV glycine betaine 100.0 4.9E-34 1.1E-38 327.9 22.9 188 699-897 4-199 (363)
126 PRK10851 sulfate/thiosulfate t 100.0 1.4E-34 3.1E-39 333.4 18.5 195 1-234 30-225 (353)
127 COG0410 LivF ABC-type branched 100.0 1.9E-34 4.2E-39 295.7 17.3 192 1-235 31-226 (237)
128 COG1124 DppF ABC-type dipeptid 100.0 4.6E-34 1E-38 294.8 20.2 202 675-897 3-211 (252)
129 cd03218 ABC_YhbG The ABC trans 100.0 7.3E-34 1.6E-38 312.8 23.2 186 701-897 13-202 (232)
130 PRK11607 potG putrescine trans 100.0 1.7E-34 3.7E-39 334.9 19.0 191 1-234 47-238 (377)
131 COG1137 YhbG ABC-type (unclass 100.0 2.4E-35 5.2E-40 291.9 10.1 195 696-899 12-210 (243)
132 PRK11153 metN DL-methionine tr 100.0 7.8E-34 1.7E-38 327.7 24.3 202 676-897 2-210 (343)
133 cd03226 ABC_cobalt_CbiO_domain 100.0 3.9E-34 8.4E-39 308.4 19.7 182 701-897 13-195 (205)
134 cd03261 ABC_Org_Solvent_Resist 100.0 2.7E-34 6E-39 316.5 18.8 191 1-233 28-224 (235)
135 PRK13536 nodulation factor exp 100.0 3.1E-34 6.6E-39 329.0 19.6 191 1-235 69-261 (340)
136 PRK11629 lolD lipoprotein tran 100.0 2E-33 4.4E-38 309.0 25.3 196 675-889 5-208 (233)
137 cd03268 ABC_BcrA_bacitracin_re 100.0 8E-34 1.7E-38 306.8 21.6 182 701-897 13-195 (208)
138 KOG0058 Peptide exporter, ABC 100.0 1E-34 2.2E-39 340.4 15.4 193 1-235 496-691 (716)
139 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-33 3E-38 321.0 24.3 197 676-897 3-201 (301)
140 PRK11000 maltose/maltodextrin 100.0 2.7E-34 5.8E-39 334.1 18.8 191 1-234 31-222 (369)
141 COG4148 ModC ABC-type molybdat 100.0 8.9E-35 1.9E-39 301.4 13.0 185 1-234 26-217 (352)
142 cd03262 ABC_HisP_GlnQ_permease 100.0 1.1E-33 2.5E-38 307.1 22.3 198 677-897 2-204 (213)
143 COG4525 TauB ABC-type taurine 100.0 5.7E-34 1.2E-38 280.2 17.8 182 701-894 18-200 (259)
144 TIGR01166 cbiO cobalt transpor 100.0 1.1E-33 2.3E-38 301.1 21.6 178 701-888 5-188 (190)
145 COG1122 CbiO ABC-type cobalt t 100.0 6.2E-34 1.4E-38 305.6 19.7 200 675-897 3-208 (235)
146 PRK11248 tauB taurine transpor 100.0 2E-33 4.4E-38 312.1 24.4 196 676-897 2-198 (255)
147 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-33 2.4E-38 310.2 21.6 187 701-897 13-209 (227)
148 cd03258 ABC_MetN_methionine_tr 100.0 1.3E-33 2.8E-38 310.8 22.2 202 676-897 2-210 (233)
149 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-33 4.3E-38 306.9 23.4 201 676-897 2-210 (221)
150 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.9E-34 2.2E-38 317.4 21.5 190 697-897 33-230 (269)
151 PRK09536 btuD corrinoid ABC tr 100.0 1.3E-33 2.8E-38 328.3 23.2 202 675-897 3-208 (402)
152 KOG0057 Mitochondrial Fe/S clu 100.0 1.6E-34 3.5E-39 326.6 14.9 197 673-898 349-555 (591)
153 KOG0066 eIF2-interacting prote 100.0 3.1E-33 6.8E-38 303.0 24.2 176 674-888 585-762 (807)
154 PRK10908 cell division protein 100.0 2.9E-33 6.2E-38 305.6 24.1 199 676-897 2-206 (222)
155 cd03263 ABC_subfamily_A The AB 100.0 1.8E-33 3.8E-38 307.1 22.4 185 701-897 15-201 (220)
156 cd03256 ABC_PhnC_transporter A 100.0 1.3E-33 2.8E-38 312.9 21.5 189 701-897 14-214 (241)
157 COG4181 Predicted ABC-type tra 100.0 6.9E-34 1.5E-38 273.6 16.6 187 699-897 21-215 (228)
158 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-33 2.5E-38 306.5 20.3 186 701-897 14-203 (211)
159 PRK13538 cytochrome c biogenes 100.0 3E-33 6.5E-38 300.9 22.9 187 676-888 2-190 (204)
160 PRK11264 putative amino-acid A 100.0 3.3E-33 7.1E-38 311.2 23.7 199 676-897 4-213 (250)
161 TIGR03608 L_ocin_972_ABC putat 100.0 2E-33 4.2E-38 303.6 21.1 178 701-888 11-195 (206)
162 PRK13637 cbiO cobalt transport 100.0 3.1E-33 6.8E-38 315.9 23.7 203 676-897 3-214 (287)
163 cd03224 ABC_TM1139_LivF_branch 100.0 2.3E-33 5E-38 306.8 21.8 184 701-897 13-201 (222)
164 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.8E-33 6.2E-38 309.7 22.7 186 701-897 14-205 (242)
165 PRK11153 metN DL-methionine tr 100.0 8.8E-34 1.9E-38 327.3 19.2 191 1-234 33-229 (343)
166 COG4525 TauB ABC-type taurine 100.0 9E-34 2E-38 278.7 16.2 190 2-236 34-225 (259)
167 cd03259 ABC_Carb_Solutes_like 100.0 8.3E-34 1.8E-38 307.9 17.8 185 1-228 28-213 (213)
168 cd03265 ABC_DrrA DrrA is the A 100.0 8.6E-34 1.9E-38 309.3 17.8 190 1-233 28-219 (220)
169 cd03235 ABC_Metallic_Cations A 100.0 1.3E-33 2.8E-38 306.4 19.1 187 701-897 12-201 (213)
170 PRK09493 glnQ glutamine ABC tr 100.0 4.7E-33 1E-37 307.7 23.8 199 676-897 2-205 (240)
171 TIGR02315 ABC_phnC phosphonate 100.0 1.8E-33 4E-38 311.9 20.6 202 676-897 2-215 (243)
172 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-33 2.6E-38 322.1 19.2 191 1-235 32-224 (303)
173 cd03264 ABC_drug_resistance_li 100.0 3.8E-33 8.2E-38 302.3 21.6 195 677-897 2-198 (211)
174 COG2274 SunT ABC-type bacterio 100.0 4.8E-34 1E-38 350.5 16.3 192 2-235 502-696 (709)
175 PRK11831 putative ABC transpor 100.0 7.2E-33 1.6E-37 310.7 24.2 200 675-897 7-213 (269)
176 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 8.2E-33 1.8E-37 304.8 24.2 197 676-897 2-201 (236)
177 cd03257 ABC_NikE_OppD_transpor 100.0 5.6E-33 1.2E-37 305.2 22.8 204 676-897 2-215 (228)
178 TIGR01189 ccmA heme ABC export 100.0 6.3E-33 1.4E-37 297.1 22.6 174 701-888 13-188 (198)
179 PRK10070 glycine betaine trans 100.0 1.5E-33 3.2E-38 327.6 19.1 191 1-234 56-253 (400)
180 COG4988 CydD ABC-type transpor 100.0 1.9E-33 4.2E-38 324.2 19.7 191 672-888 317-516 (559)
181 PRK13634 cbiO cobalt transport 100.0 5.3E-33 1.2E-37 314.5 22.9 204 676-898 3-216 (290)
182 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.1E-33 4.5E-38 314.8 19.4 191 1-234 52-249 (269)
183 cd03219 ABC_Mj1267_LivG_branch 100.0 1.8E-33 3.9E-38 310.6 18.5 199 1-233 28-230 (236)
184 PRK10895 lipopolysaccharide AB 100.0 5.6E-33 1.2E-37 307.4 22.3 199 676-897 4-206 (241)
185 PRK11247 ssuB aliphatic sulfon 100.0 6.3E-33 1.4E-37 307.3 22.7 191 675-897 12-203 (257)
186 PRK13647 cbiO cobalt transport 100.0 7.3E-33 1.6E-37 311.0 23.3 200 675-897 4-207 (274)
187 cd03233 ABC_PDR_domain1 The pl 100.0 8E-33 1.7E-37 296.5 22.4 183 675-897 3-189 (202)
188 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-33 2.5E-38 307.5 16.2 180 1-224 31-216 (216)
189 PRK13637 cbiO cobalt transport 100.0 2.2E-33 4.7E-38 317.1 19.0 191 1-234 35-233 (287)
190 cd03296 ABC_CysA_sulfate_impor 100.0 2.4E-33 5.2E-38 309.7 18.7 194 1-233 30-224 (239)
191 TIGR03522 GldA_ABC_ATP gliding 100.0 2E-33 4.3E-38 319.7 18.6 190 1-235 30-221 (301)
192 cd03218 ABC_YhbG The ABC trans 100.0 2.4E-33 5.2E-38 308.7 18.6 189 1-233 28-220 (232)
193 PRK13539 cytochrome c biogenes 100.0 8.5E-33 1.8E-37 297.9 22.3 186 676-888 3-188 (207)
194 cd03231 ABC_CcmA_heme_exporter 100.0 7.3E-33 1.6E-37 297.0 21.7 172 701-888 13-186 (201)
195 TIGR02868 CydC thiol reductant 100.0 1.7E-33 3.7E-38 347.8 19.3 188 674-887 333-529 (529)
196 PRK13631 cbiO cobalt transport 100.0 8.6E-33 1.9E-37 315.2 23.5 203 675-897 21-245 (320)
197 cd03258 ABC_MetN_methionine_tr 100.0 2.5E-33 5.5E-38 308.6 18.3 190 1-233 33-228 (233)
198 PRK14247 phosphate ABC transpo 100.0 1.3E-32 2.9E-37 306.1 24.2 206 675-897 3-214 (250)
199 PRK11124 artP arginine transpo 100.0 1E-32 2.3E-37 305.4 23.3 199 675-897 2-210 (242)
200 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.9E-33 6.3E-38 305.1 18.5 185 1-230 32-218 (220)
201 PRK13646 cbiO cobalt transport 100.0 9.2E-33 2E-37 312.2 23.1 203 675-897 2-215 (286)
202 PRK13543 cytochrome c biogenes 100.0 1.7E-32 3.6E-37 297.2 24.0 196 675-897 11-206 (214)
203 PRK10619 histidine/lysine/argi 100.0 1.4E-32 3E-37 306.9 24.0 199 675-897 5-221 (257)
204 COG4988 CydD ABC-type transpor 100.0 1.5E-33 3.2E-38 325.1 16.6 192 1-235 349-543 (559)
205 cd03269 ABC_putative_ATPase Th 100.0 2.3E-33 4.9E-38 303.8 17.1 183 1-228 28-210 (210)
206 PRK11144 modC molybdate transp 100.0 2.4E-33 5.3E-38 324.8 18.5 185 1-234 26-217 (352)
207 PRK13643 cbiO cobalt transport 100.0 1.2E-32 2.5E-37 311.4 23.5 203 676-898 2-214 (288)
208 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-32 3.1E-37 305.1 23.7 199 676-897 2-212 (247)
209 cd03264 ABC_drug_resistance_li 100.0 2.6E-33 5.6E-38 303.6 17.3 183 1-228 27-211 (211)
210 PRK10584 putative ABC transpor 100.0 2E-32 4.4E-37 300.4 24.4 202 675-897 6-215 (228)
211 PRK13650 cbiO cobalt transport 100.0 9.3E-33 2E-37 311.0 22.1 201 675-897 4-209 (279)
212 TIGR01978 sufC FeS assembly AT 100.0 1.4E-32 3E-37 305.1 23.0 203 677-897 2-214 (243)
213 PRK13651 cobalt transporter AT 100.0 1.2E-32 2.6E-37 312.2 23.0 204 675-897 2-234 (305)
214 cd03301 ABC_MalK_N The N-termi 100.0 4E-33 8.7E-38 302.7 18.2 185 1-228 28-213 (213)
215 TIGR03415 ABC_choXWV_ATP choli 100.0 3.8E-33 8.2E-38 321.7 18.9 191 1-234 52-253 (382)
216 PRK10070 glycine betaine trans 100.0 1.4E-32 2.9E-37 319.5 23.7 188 699-897 39-234 (400)
217 PRK13540 cytochrome c biogenes 100.0 1.6E-32 3.5E-37 294.2 22.6 185 676-888 2-188 (200)
218 PRK00349 uvrA excinuclease ABC 100.0 1.2E-31 2.6E-36 337.8 34.0 103 123-233 472-583 (943)
219 PRK11614 livF leucine/isoleuci 100.0 1.2E-32 2.7E-37 303.8 22.2 197 675-897 5-206 (237)
220 PRK13636 cbiO cobalt transport 100.0 1.6E-32 3.5E-37 309.7 23.4 200 675-897 5-211 (283)
221 COG2274 SunT ABC-type bacterio 100.0 3.2E-33 7E-38 343.1 19.0 199 672-897 468-676 (709)
222 cd03263 ABC_subfamily_A The AB 100.0 3.4E-33 7.3E-38 304.9 17.0 188 1-233 30-219 (220)
223 PRK00635 excinuclease ABC subu 100.0 9.4E-32 2E-36 350.6 33.4 117 773-897 760-880 (1809)
224 TIGR03005 ectoine_ehuA ectoine 100.0 2E-32 4.4E-37 304.9 23.4 198 677-897 2-216 (252)
225 PRK13643 cbiO cobalt transport 100.0 3.8E-33 8.2E-38 315.4 17.8 202 1-247 34-248 (288)
226 PRK13641 cbiO cobalt transport 100.0 1.8E-32 3.9E-37 309.9 23.3 204 675-897 2-214 (287)
227 PRK14267 phosphate ABC transpo 100.0 2.2E-32 4.9E-37 304.8 23.7 206 675-897 4-217 (253)
228 COG4559 ABC-type hemin transpo 100.0 5.9E-33 1.3E-37 277.4 16.8 198 676-897 2-210 (259)
229 cd03266 ABC_NatA_sodium_export 100.0 3.2E-33 6.9E-38 304.6 16.5 184 1-228 33-218 (218)
230 TIGR02142 modC_ABC molybdenum 100.0 5.1E-33 1.1E-37 322.7 19.2 189 1-234 25-220 (354)
231 cd03256 ABC_PhnC_transporter A 100.0 5.5E-33 1.2E-37 307.8 18.6 198 1-233 29-232 (241)
232 cd03226 ABC_cobalt_CbiO_domain 100.0 3.2E-33 6.9E-38 301.3 16.2 177 1-225 28-205 (205)
233 PRK13635 cbiO cobalt transport 100.0 1.6E-32 3.5E-37 308.7 22.6 200 675-897 5-209 (279)
234 TIGR01187 potA spermidine/putr 100.0 4.6E-33 1E-37 319.2 18.4 188 4-234 1-189 (325)
235 cd03224 ABC_TM1139_LivF_branch 100.0 4.8E-33 1E-37 304.3 17.7 187 1-233 28-219 (222)
236 PRK14273 phosphate ABC transpo 100.0 2.6E-32 5.6E-37 304.4 23.9 200 675-897 7-218 (254)
237 cd03268 ABC_BcrA_bacitracin_re 100.0 4.8E-33 1E-37 300.8 17.4 180 1-228 28-208 (208)
238 TIGR03411 urea_trans_UrtD urea 100.0 2.5E-32 5.4E-37 302.5 23.5 200 676-897 3-211 (242)
239 PRK13644 cbiO cobalt transport 100.0 1.9E-32 4.1E-37 307.7 22.8 198 676-897 2-204 (274)
240 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.7E-32 3.8E-37 297.1 21.7 181 706-897 16-198 (211)
241 PRK13548 hmuV hemin importer A 100.0 2.2E-32 4.7E-37 304.9 23.1 198 676-897 3-210 (258)
242 TIGR03740 galliderm_ABC gallid 100.0 2.7E-32 5.8E-37 298.2 23.3 181 701-897 13-193 (223)
243 cd03232 ABC_PDR_domain2 The pl 100.0 2.2E-32 4.7E-37 290.9 22.0 176 675-897 3-178 (192)
244 PRK14268 phosphate ABC transpo 100.0 3.2E-32 7E-37 303.9 24.3 203 675-897 12-222 (258)
245 PRK15079 oligopeptide ABC tran 100.0 3.1E-32 6.8E-37 311.7 24.7 214 675-897 8-231 (331)
246 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.4E-33 1.4E-37 306.9 18.5 190 1-233 29-223 (242)
247 PRK13634 cbiO cobalt transport 100.0 7.4E-33 1.6E-37 313.3 19.3 190 1-233 35-233 (290)
248 cd03260 ABC_PstB_phosphate_tra 100.0 3.9E-33 8.4E-38 305.8 16.5 189 1-232 28-226 (227)
249 PRK13647 cbiO cobalt transport 100.0 8.6E-33 1.9E-37 310.4 19.6 189 1-233 33-225 (274)
250 KOG0057 Mitochondrial Fe/S clu 100.0 1.5E-33 3.3E-38 318.7 13.3 191 2-235 381-574 (591)
251 PRK11300 livG leucine/isoleuci 100.0 3E-32 6.5E-37 304.4 23.7 202 675-897 5-223 (255)
252 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.2E-33 9.1E-38 303.7 16.3 180 1-224 32-218 (218)
253 COG0410 LivF ABC-type branched 100.0 1.5E-32 3.3E-37 281.7 19.2 197 676-897 4-206 (237)
254 PRK14241 phosphate transporter 100.0 3.5E-32 7.7E-37 303.8 24.0 205 675-897 4-216 (258)
255 PRK14242 phosphate transporter 100.0 3.9E-32 8.4E-37 303.0 24.2 205 674-897 5-217 (253)
256 PRK13632 cbiO cobalt transport 100.0 2.8E-32 6E-37 306.3 23.1 200 675-897 7-211 (271)
257 cd03267 ABC_NatA_like Similar 100.0 2.5E-32 5.5E-37 300.3 22.3 188 699-897 32-223 (236)
258 PRK09536 btuD corrinoid ABC tr 100.0 5.5E-33 1.2E-37 323.1 17.9 193 1-233 31-226 (402)
259 PRK11231 fecE iron-dicitrate t 100.0 2.3E-32 5E-37 304.8 22.1 201 676-897 3-207 (255)
260 PRK10575 iron-hydroxamate tran 100.0 2.6E-32 5.7E-37 305.7 22.6 202 675-897 11-217 (265)
261 PRK13638 cbiO cobalt transport 100.0 2.8E-32 6E-37 306.5 22.8 198 676-897 2-205 (271)
262 cd03300 ABC_PotA_N PotA is an 100.0 4.1E-32 8.9E-37 298.3 23.6 197 677-897 2-200 (232)
263 PRK15079 oligopeptide ABC tran 100.0 9.4E-33 2E-37 316.0 19.1 193 1-234 49-250 (331)
264 PRK13652 cbiO cobalt transport 100.0 4.1E-32 8.8E-37 305.7 23.8 199 676-897 4-207 (277)
265 PRK09984 phosphonate/organopho 100.0 3E-32 6.5E-37 305.1 22.4 204 675-897 4-222 (262)
266 TIGR01184 ntrCD nitrate transp 100.0 2.5E-32 5.4E-37 299.1 21.1 183 704-897 1-184 (230)
267 cd03213 ABCG_EPDR ABCG transpo 100.0 4.5E-32 9.7E-37 288.7 22.4 177 675-897 3-181 (194)
268 PRK13649 cbiO cobalt transport 100.0 4.2E-32 9.2E-37 306.8 23.5 203 675-897 2-214 (280)
269 PRK10744 pstB phosphate transp 100.0 5E-32 1.1E-36 302.8 23.7 206 673-897 11-224 (260)
270 PRK11831 putative ABC transpor 100.0 1.2E-32 2.7E-37 308.8 18.9 192 1-234 35-232 (269)
271 PRK14245 phosphate ABC transpo 100.0 5.7E-32 1.2E-36 300.9 24.1 204 675-897 3-214 (250)
272 PRK13631 cbiO cobalt transport 100.0 1.1E-32 2.3E-37 314.4 18.6 188 1-233 54-263 (320)
273 PRK11629 lolD lipoprotein tran 100.0 1.3E-32 2.9E-37 302.5 18.7 186 1-230 37-229 (233)
274 TIGR02982 heterocyst_DevA ABC 100.0 5.7E-32 1.2E-36 294.8 23.4 202 676-897 2-210 (220)
275 TIGR02315 ABC_phnC phosphonate 100.0 9.6E-33 2.1E-37 306.2 17.6 198 1-233 30-233 (243)
276 TIGR00968 3a0106s01 sulfate AB 100.0 5.3E-32 1.2E-36 298.2 23.3 186 701-897 13-200 (237)
277 PRK10253 iron-enterobactin tra 100.0 3.2E-32 7E-37 305.0 21.9 202 675-897 7-213 (265)
278 PRK14235 phosphate transporter 100.0 5.7E-32 1.2E-36 303.1 23.9 205 675-897 19-231 (267)
279 TIGR01277 thiQ thiamine ABC tr 100.0 4.5E-32 9.8E-37 294.0 22.4 184 703-897 13-198 (213)
280 PRK11174 cysteine/glutathione 100.0 1.2E-32 2.5E-37 344.8 20.4 195 674-897 348-552 (588)
281 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-32 3.6E-37 302.3 19.1 190 1-234 29-220 (236)
282 COG4559 ABC-type hemin transpo 100.0 7.8E-33 1.7E-37 276.6 14.7 192 1-234 29-229 (259)
283 PRK13651 cobalt transporter AT 100.0 7.1E-33 1.5E-37 314.1 16.4 190 1-234 35-253 (305)
284 TIGR02769 nickel_nikE nickel i 100.0 6.6E-32 1.4E-36 302.5 24.0 208 676-897 3-220 (265)
285 PRK13650 cbiO cobalt transport 100.0 1.5E-32 3.3E-37 309.2 19.0 190 1-234 35-228 (279)
286 TIGR03873 F420-0_ABC_ATP propo 100.0 4.3E-32 9.4E-37 302.7 22.3 201 676-897 2-206 (256)
287 PRK14237 phosphate transporter 100.0 8.8E-32 1.9E-36 301.6 24.9 207 672-897 17-231 (267)
288 PRK09493 glnQ glutamine ABC tr 100.0 1.2E-32 2.5E-37 304.6 17.4 189 1-233 29-223 (240)
289 PRK11264 putative amino-acid A 100.0 1.4E-32 3.1E-37 306.0 18.3 189 1-233 31-231 (250)
290 PRK13639 cbiO cobalt transport 100.0 6.3E-32 1.4E-36 303.9 23.3 199 676-897 2-206 (275)
291 TIGR01184 ntrCD nitrate transp 100.0 1.4E-32 3.1E-37 301.1 17.6 189 1-232 13-201 (230)
292 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-32 2.9E-37 298.0 17.2 185 1-228 26-211 (211)
293 cd03297 ABC_ModC_molybdenum_tr 100.0 1.7E-32 3.7E-37 297.7 18.0 183 1-228 25-214 (214)
294 TIGR03415 ABC_choXWV_ATP choli 100.0 3.9E-32 8.5E-37 313.3 22.0 189 698-897 34-234 (382)
295 COG4987 CydC ABC-type transpor 100.0 5.8E-33 1.2E-37 314.0 14.5 196 675-897 336-541 (573)
296 TIGR03410 urea_trans_UrtE urea 100.0 4.9E-32 1.1E-36 297.7 21.5 194 677-897 2-201 (230)
297 PRK14269 phosphate ABC transpo 100.0 6.9E-32 1.5E-36 299.3 22.9 204 676-897 3-210 (246)
298 TIGR02673 FtsE cell division A 100.0 1.5E-32 3.3E-37 298.4 17.0 179 1-223 30-214 (214)
299 cd03292 ABC_FtsE_transporter F 100.0 1.4E-32 3.1E-37 298.7 16.7 180 1-224 29-214 (214)
300 PRK13646 cbiO cobalt transport 100.0 1.4E-32 3E-37 310.8 17.1 190 1-234 35-234 (286)
301 TIGR00630 uvra excinuclease AB 100.0 5E-31 1.1E-35 331.6 32.8 103 123-233 470-581 (924)
302 cd03299 ABC_ModC_like Archeal 100.0 9.7E-32 2.1E-36 295.7 23.2 184 703-897 14-199 (235)
303 PRK14256 phosphate ABC transpo 100.0 1.1E-31 2.5E-36 298.8 24.0 205 675-897 4-216 (252)
304 PRK14259 phosphate ABC transpo 100.0 8.6E-32 1.9E-36 301.7 23.1 202 675-897 13-222 (269)
305 PRK13549 xylose transporter AT 100.0 6.1E-32 1.3E-36 331.0 23.8 204 675-897 5-212 (506)
306 COG0444 DppD ABC-type dipeptid 100.0 2.8E-32 6E-37 295.1 18.1 215 1-258 33-258 (316)
307 PRK11174 cysteine/glutathione 100.0 7.3E-33 1.6E-37 346.6 15.8 192 1-235 378-572 (588)
308 PRK13633 cobalt transporter AT 100.0 8.2E-32 1.8E-36 303.7 22.7 204 675-897 4-213 (280)
309 PRK13648 cbiO cobalt transport 100.0 1.2E-31 2.5E-36 301.2 23.8 200 675-897 7-211 (269)
310 PRK14250 phosphate ABC transpo 100.0 7.2E-32 1.6E-36 297.9 21.7 194 675-897 3-201 (241)
311 COG0411 LivG ABC-type branched 100.0 2.5E-32 5.4E-37 282.4 16.7 192 698-897 14-219 (250)
312 PRK13641 cbiO cobalt transport 100.0 2.1E-32 4.5E-37 309.5 17.5 190 1-234 35-233 (287)
313 PRK10895 lipopolysaccharide AB 100.0 2.8E-32 6E-37 301.8 18.1 190 1-233 31-224 (241)
314 PRK11247 ssuB aliphatic sulfon 100.0 2.3E-32 5.1E-37 302.7 17.4 180 1-231 40-219 (257)
315 PRK11248 tauB taurine transpor 100.0 3.2E-32 6.9E-37 302.5 18.5 186 1-231 29-216 (255)
316 PRK13645 cbiO cobalt transport 100.0 1E-31 2.2E-36 304.7 22.9 204 675-897 6-220 (289)
317 PRK13547 hmuV hemin importer A 100.0 7.4E-32 1.6E-36 301.3 21.5 203 676-897 2-224 (272)
318 cd03230 ABC_DR_subfamily_A Thi 100.0 8.3E-32 1.8E-36 281.5 20.5 149 702-897 14-164 (173)
319 KOG0056 Heavy metal exporter H 100.0 3.2E-33 6.8E-38 307.4 10.1 198 669-888 531-734 (790)
320 PRK14257 phosphate ABC transpo 100.0 1.5E-31 3.2E-36 305.9 24.3 205 675-897 80-293 (329)
321 PRK11022 dppD dipeptide transp 100.0 1.8E-31 4E-36 305.5 25.1 208 676-897 4-223 (326)
322 PRK09473 oppD oligopeptide tra 100.0 3.6E-32 7.8E-37 311.5 19.2 198 1-234 44-250 (330)
323 PRK10771 thiQ thiamine transpo 100.0 3.4E-32 7.4E-37 299.1 18.2 191 1-234 27-218 (232)
324 PRK13640 cbiO cobalt transport 100.0 1.1E-31 2.3E-36 302.8 22.4 202 675-897 5-212 (282)
325 PRK14244 phosphate ABC transpo 100.0 1.4E-31 3E-36 298.0 23.0 204 676-897 6-217 (251)
326 PRK10771 thiQ thiamine transpo 100.0 1.1E-31 2.5E-36 294.9 21.9 196 676-897 2-199 (232)
327 TIGR02770 nickel_nikD nickel i 100.0 3.9E-32 8.4E-37 298.0 18.2 191 1-234 14-214 (230)
328 PRK09473 oppD oligopeptide tra 100.0 1.9E-31 4.2E-36 305.4 24.7 209 675-897 12-231 (330)
329 TIGR02211 LolD_lipo_ex lipopro 100.0 2.9E-32 6.2E-37 297.8 17.0 181 1-225 33-220 (221)
330 PRK11308 dppF dipeptide transp 100.0 2.2E-31 4.9E-36 304.5 25.1 210 675-897 5-224 (327)
331 PRK14240 phosphate transporter 100.0 1.8E-31 3.9E-36 297.0 23.7 204 675-897 3-214 (250)
332 TIGR03410 urea_trans_UrtE urea 100.0 3.6E-32 7.7E-37 298.8 17.7 187 1-233 28-219 (230)
333 PRK14274 phosphate ABC transpo 100.0 1.7E-31 3.6E-36 298.6 23.4 204 675-897 12-223 (259)
334 PRK14239 phosphate transporter 100.0 1.8E-31 3.9E-36 297.5 23.6 204 675-897 5-216 (252)
335 PRK11308 dppF dipeptide transp 100.0 4.9E-32 1.1E-36 309.9 19.5 192 1-234 43-243 (327)
336 PRK13541 cytochrome c biogenes 100.0 2E-31 4.3E-36 284.6 22.9 183 676-888 2-184 (195)
337 PRK13635 cbiO cobalt transport 100.0 3.1E-32 6.8E-37 306.4 17.5 190 1-234 35-228 (279)
338 PRK14262 phosphate ABC transpo 100.0 1.9E-31 4.1E-36 296.8 23.6 203 676-897 4-214 (250)
339 PRK11614 livF leucine/isoleuci 100.0 3.2E-32 6.9E-37 300.5 17.2 187 1-233 33-224 (237)
340 COG4181 Predicted ABC-type tra 100.0 4.2E-32 9.1E-37 261.4 15.7 181 2-226 39-226 (228)
341 PRK10247 putative ABC transpor 100.0 1.3E-31 2.9E-36 292.5 22.0 195 675-897 7-206 (225)
342 KOG0055 Multidrug/pheromone ex 100.0 2.5E-32 5.3E-37 338.1 18.0 200 672-897 347-556 (1228)
343 TIGR01277 thiQ thiamine ABC tr 100.0 5.4E-32 1.2E-36 293.4 18.5 186 1-229 26-212 (213)
344 PRK10908 cell division protein 100.0 3.7E-32 8E-37 296.9 17.3 181 1-225 30-216 (222)
345 PRK14270 phosphate ABC transpo 100.0 2.2E-31 4.9E-36 296.3 23.9 203 675-897 4-215 (251)
346 cd03234 ABCG_White The White s 100.0 5.1E-32 1.1E-36 296.5 18.4 187 1-228 35-226 (226)
347 cd03257 ABC_NikE_OppD_transpor 100.0 5.1E-32 1.1E-36 297.6 18.3 187 1-228 33-228 (228)
348 PRK15112 antimicrobial peptide 100.0 1.7E-31 3.7E-36 299.2 22.8 208 676-897 5-219 (267)
349 TIGR02142 modC_ABC molybdenum 100.0 9.5E-32 2.1E-36 312.2 21.4 179 706-897 15-201 (354)
350 PRK13642 cbiO cobalt transport 100.0 1.5E-31 3.3E-36 301.0 22.4 201 675-897 4-209 (277)
351 PRK13636 cbiO cobalt transport 100.0 3.4E-32 7.5E-37 307.0 17.1 191 1-234 34-230 (283)
352 cd03297 ABC_ModC_molybdenum_tr 100.0 1.2E-31 2.6E-36 291.0 20.7 178 706-897 16-201 (214)
353 PRK14260 phosphate ABC transpo 100.0 2.4E-31 5.1E-36 297.2 23.6 204 675-897 7-218 (259)
354 TIGR03740 galliderm_ABC gallid 100.0 7E-32 1.5E-36 294.9 18.8 182 1-231 28-209 (223)
355 PRK13644 cbiO cobalt transport 100.0 4.7E-32 1E-36 304.5 17.7 188 1-233 30-222 (274)
356 TIGR00972 3a0107s01c2 phosphat 100.0 6.2E-32 1.3E-36 300.0 18.2 191 1-233 29-230 (247)
357 COG4152 ABC-type uncharacteriz 100.0 3E-32 6.6E-37 277.8 14.3 192 1-237 30-221 (300)
358 PRK15056 manganese/iron transp 100.0 1.9E-31 4.2E-36 299.6 22.4 203 675-897 6-211 (272)
359 cd03225 ABC_cobalt_CbiO_domain 100.0 4.1E-32 8.9E-37 294.3 16.4 179 1-223 29-211 (211)
360 PRK14236 phosphate transporter 100.0 3.8E-31 8.3E-36 297.2 24.7 204 675-897 25-236 (272)
361 PRK11300 livG leucine/isoleuci 100.0 6.5E-32 1.4E-36 301.7 18.3 205 1-233 33-241 (255)
362 TIGR03411 urea_trans_UrtD urea 100.0 6.4E-32 1.4E-36 299.2 18.2 196 1-233 30-229 (242)
363 PRK10619 histidine/lysine/argi 100.0 5.7E-32 1.2E-36 302.0 17.9 189 1-233 33-239 (257)
364 TIGR02770 nickel_nikD nickel i 100.0 1.3E-31 2.8E-36 293.9 20.3 186 703-897 1-195 (230)
365 PRK13548 hmuV hemin importer A 100.0 7E-32 1.5E-36 300.8 18.4 190 1-233 30-228 (258)
366 TIGR02324 CP_lyasePhnL phospho 100.0 3.4E-31 7.3E-36 289.9 23.4 205 676-897 2-218 (224)
367 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.3E-31 5E-36 290.1 21.9 181 697-897 31-211 (224)
368 PRK11144 modC molybdate transp 100.0 1.2E-31 2.6E-36 310.7 20.8 175 706-897 16-198 (352)
369 PRK13652 cbiO cobalt transport 100.0 7.6E-32 1.7E-36 303.5 18.7 191 1-234 32-226 (277)
370 PRK13638 cbiO cobalt transport 100.0 7.1E-32 1.5E-36 303.2 18.4 189 1-233 29-223 (271)
371 PRK14258 phosphate ABC transpo 100.0 3.9E-31 8.4E-36 295.5 24.1 205 675-897 7-220 (261)
372 PRK11176 lipid transporter ATP 100.0 9.5E-32 2.1E-36 336.4 21.3 198 675-898 341-548 (582)
373 PRK13632 cbiO cobalt transport 100.0 6.9E-32 1.5E-36 303.1 17.9 189 1-233 37-229 (271)
374 PRK13649 cbiO cobalt transport 100.0 9.4E-32 2E-36 304.0 19.2 189 1-233 35-232 (280)
375 PRK14253 phosphate ABC transpo 100.0 3.1E-31 6.8E-36 294.9 23.0 204 675-897 3-213 (249)
376 PRK15093 antimicrobial peptide 100.0 4.1E-31 8.9E-36 303.8 24.5 210 676-897 4-228 (330)
377 PRK14254 phosphate ABC transpo 100.0 5.8E-31 1.3E-35 296.8 25.3 202 675-897 39-248 (285)
378 PRK11124 artP arginine transpo 100.0 6.1E-32 1.3E-36 299.2 17.0 189 1-233 30-228 (242)
379 PRK10418 nikD nickel transport 100.0 3.5E-31 7.5E-36 294.9 23.1 198 675-897 4-210 (254)
380 PRK14271 phosphate ABC transpo 100.0 3.9E-31 8.5E-36 297.0 23.6 204 675-897 21-231 (276)
381 PRK14272 phosphate ABC transpo 100.0 4.8E-31 1E-35 294.2 24.2 205 675-897 4-216 (252)
382 PRK14249 phosphate ABC transpo 100.0 4.6E-31 9.9E-36 293.8 23.9 204 675-897 4-215 (251)
383 PRK14261 phosphate ABC transpo 100.0 3.9E-31 8.4E-36 294.7 23.4 204 675-897 6-217 (253)
384 PRK14257 phosphate ABC transpo 100.0 8.6E-32 1.9E-36 307.8 18.5 196 1-234 110-312 (329)
385 PRK10762 D-ribose transporter 100.0 2.3E-31 5E-36 325.5 23.6 201 676-897 5-210 (501)
386 cd03235 ABC_Metallic_Cations A 100.0 4E-32 8.7E-37 294.7 15.0 185 1-228 27-213 (213)
387 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.1E-32 1.8E-36 342.3 20.3 193 675-897 451-653 (686)
388 PRK13648 cbiO cobalt transport 100.0 1.4E-31 3E-36 300.6 19.7 190 1-234 37-230 (269)
389 TIGR03005 ectoine_ehuA ectoine 100.0 8.7E-32 1.9E-36 299.8 17.9 191 1-233 28-234 (252)
390 PRK10584 putative ABC transpor 100.0 1E-31 2.2E-36 294.8 18.1 183 1-227 38-227 (228)
391 PRK14275 phosphate ABC transpo 100.0 7.2E-31 1.6E-35 296.5 25.4 200 675-897 39-250 (286)
392 PRK14268 phosphate ABC transpo 100.0 9.6E-32 2.1E-36 300.1 18.0 190 1-233 40-240 (258)
393 PRK14273 phosphate ABC transpo 100.0 9.3E-32 2E-36 299.9 17.8 192 1-234 35-237 (254)
394 PRK11022 dppD dipeptide transp 100.0 1.2E-31 2.5E-36 307.1 19.1 198 1-234 35-242 (326)
395 PRK14250 phosphate ABC transpo 100.0 9.3E-32 2E-36 297.0 17.6 185 1-233 31-219 (241)
396 COG1132 MdlB ABC-type multidru 100.0 4.8E-32 1E-36 337.2 17.1 196 674-897 327-532 (567)
397 TIGR02769 nickel_nikE nickel i 100.0 1.2E-31 2.6E-36 300.4 18.7 192 1-234 39-239 (265)
398 cd03267 ABC_NatA_like Similar 100.0 1.1E-31 2.4E-36 295.2 18.1 185 1-228 49-236 (236)
399 cd03229 ABC_Class3 This class 100.0 1.8E-31 4E-36 280.3 18.9 152 701-897 13-170 (178)
400 PRK14263 phosphate ABC transpo 100.0 5.8E-31 1.3E-35 293.4 23.9 202 675-897 8-217 (261)
401 PRK13639 cbiO cobalt transport 100.0 1.8E-31 3.9E-36 300.1 20.0 190 1-234 30-225 (275)
402 cd03233 ABC_PDR_domain1 The pl 100.0 1.2E-31 2.5E-36 287.5 17.5 166 1-228 35-202 (202)
403 PRK10790 putative multidrug tr 100.0 2.3E-31 5E-36 333.1 23.0 196 674-898 339-544 (592)
404 cd03299 ABC_ModC_like Archeal 100.0 1.5E-31 3.2E-36 294.2 18.7 191 1-234 27-218 (235)
405 PRK13633 cobalt transporter AT 100.0 1.2E-31 2.5E-36 302.5 18.2 190 1-234 38-232 (280)
406 PRK09984 phosphonate/organopho 100.0 9.7E-32 2.1E-36 301.0 17.4 201 1-233 32-240 (262)
407 PRK11160 cysteine/glutathione 100.0 1.8E-31 3.8E-36 331.3 21.4 197 674-897 337-542 (574)
408 PRK14247 phosphate ABC transpo 100.0 1.7E-31 3.7E-36 297.2 18.8 197 1-233 31-232 (250)
409 cd03300 ABC_PotA_N PotA is an 100.0 2E-31 4.2E-36 292.9 19.1 190 1-233 28-218 (232)
410 PRK09700 D-allose transporter 100.0 3.3E-31 7.1E-36 325.1 23.1 202 675-897 5-214 (510)
411 cd03262 ABC_HisP_GlnQ_permease 100.0 6.7E-32 1.5E-36 293.2 15.1 180 1-224 28-213 (213)
412 PRK14251 phosphate ABC transpo 100.0 6.7E-31 1.4E-35 292.6 23.4 204 675-897 4-215 (251)
413 PRK13640 cbiO cobalt transport 100.0 1.2E-31 2.5E-36 302.6 17.4 193 1-234 35-231 (282)
414 PRK14248 phosphate ABC transpo 100.0 5.7E-31 1.2E-35 295.6 22.9 204 675-897 21-232 (268)
415 PRK11701 phnK phosphonate C-P 100.0 6.8E-31 1.5E-35 293.5 23.3 200 675-897 6-221 (258)
416 COG4598 HisP ABC-type histidin 100.0 4E-32 8.6E-37 263.1 11.5 190 1-233 34-239 (256)
417 PRK14255 phosphate ABC transpo 100.0 9.4E-31 2E-35 291.6 24.3 204 675-897 5-216 (252)
418 TIGR02857 CydD thiol reductant 100.0 1.4E-31 3E-36 330.8 19.4 196 675-897 320-525 (529)
419 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.6E-31 5.7E-36 296.0 19.5 195 675-897 2-205 (275)
420 COG4152 ABC-type uncharacteriz 100.0 2.5E-31 5.5E-36 271.2 17.5 190 697-898 11-200 (300)
421 PRK13645 cbiO cobalt transport 100.0 1.2E-31 2.7E-36 304.0 17.0 190 1-233 39-238 (289)
422 TIGR02633 xylG D-xylose ABC tr 100.0 6.1E-31 1.3E-35 322.2 24.3 203 676-897 2-210 (500)
423 cd03215 ABC_Carb_Monos_II This 100.0 4.7E-31 1E-35 278.2 20.0 152 703-897 15-173 (182)
424 PRK11288 araG L-arabinose tran 100.0 5.7E-31 1.2E-35 322.0 23.7 202 675-897 4-209 (501)
425 PRK14267 phosphate ABC transpo 100.0 2E-31 4.4E-36 297.1 17.9 197 1-233 32-235 (253)
426 PRK15112 antimicrobial peptide 100.0 2.2E-31 4.8E-36 298.4 18.3 192 1-234 41-238 (267)
427 TIGR01978 sufC FeS assembly AT 100.0 2.9E-31 6.3E-36 294.4 19.0 198 1-234 28-233 (243)
428 cd03245 ABCC_bacteriocin_expor 100.0 2.7E-31 5.8E-36 290.0 18.3 196 676-897 3-207 (220)
429 TIGR03771 anch_rpt_ABC anchore 100.0 2E-31 4.3E-36 290.6 17.2 190 1-233 8-199 (223)
430 PRK10253 iron-enterobactin tra 100.0 1.6E-31 3.4E-36 299.4 16.8 195 1-234 35-232 (265)
431 PRK10575 iron-hydroxamate tran 100.0 1.5E-31 3.2E-36 299.6 16.6 194 1-233 39-235 (265)
432 PRK14243 phosphate transporter 100.0 7.8E-31 1.7E-35 293.4 22.3 202 675-897 10-219 (264)
433 TIGR03873 F420-0_ABC_ATP propo 100.0 2.1E-31 4.5E-36 297.3 17.6 193 1-233 29-224 (256)
434 PRK14238 phosphate transporter 100.0 1E-30 2.2E-35 293.4 23.2 204 675-897 24-235 (271)
435 PRK14242 phosphate transporter 100.0 2.2E-31 4.8E-36 296.9 17.7 195 1-233 34-235 (253)
436 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.9E-32 1.5E-36 342.9 15.4 189 2-235 482-673 (686)
437 COG4619 ABC-type uncharacteriz 100.0 4.9E-32 1.1E-36 260.1 10.5 186 699-897 14-203 (223)
438 PRK14265 phosphate ABC transpo 100.0 1.2E-30 2.6E-35 293.1 23.5 202 675-897 20-229 (274)
439 PRK11231 fecE iron-dicitrate t 100.0 1.7E-31 3.6E-36 297.8 16.5 193 1-233 30-225 (255)
440 TIGR00968 3a0106s01 sulfate AB 100.0 3.1E-31 6.7E-36 292.1 18.5 191 1-234 28-219 (237)
441 CHL00131 ycf16 sulfate ABC tra 100.0 1.3E-30 2.9E-35 290.6 23.7 198 675-889 7-213 (252)
442 PRK15439 autoinducer 2 ABC tra 100.0 7.2E-31 1.6E-35 321.2 23.5 195 675-897 11-209 (510)
443 PRK10790 putative multidrug tr 100.0 1.5E-31 3.3E-36 334.7 17.7 192 1-235 369-563 (592)
444 COG1132 MdlB ABC-type multidru 100.0 6.6E-32 1.4E-36 336.0 14.3 193 1-235 357-552 (567)
445 PRK14270 phosphate ABC transpo 100.0 3.9E-31 8.4E-36 294.4 18.8 192 1-234 32-234 (251)
446 PRK14241 phosphate transporter 100.0 3.3E-31 7.1E-36 296.0 18.3 192 1-233 32-240 (258)
447 cd03252 ABCC_Hemolysin The ABC 100.0 2.1E-31 4.5E-36 294.2 16.3 194 677-897 2-205 (237)
448 PRK10419 nikE nickel transport 100.0 1.4E-30 3.1E-35 291.7 23.3 208 676-897 4-221 (268)
449 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.1E-31 4.5E-36 340.3 18.7 195 674-897 476-680 (710)
450 PRK14256 phosphate ABC transpo 100.0 4.8E-31 1E-35 293.8 19.0 196 1-233 32-234 (252)
451 PRK14235 phosphate transporter 100.0 3.4E-31 7.4E-36 296.8 17.9 196 1-233 47-249 (267)
452 PRK03695 vitamin B12-transport 100.0 3.9E-31 8.5E-36 292.9 18.1 187 1-233 24-220 (248)
453 TIGR00958 3a01208 Conjugate Tr 100.0 3.5E-31 7.6E-36 335.9 20.2 195 675-897 478-682 (711)
454 PRK15093 antimicrobial peptide 100.0 3.8E-31 8.3E-36 304.1 18.7 202 1-234 35-247 (330)
455 PRK14269 phosphate ABC transpo 100.0 4E-31 8.7E-36 293.1 18.1 197 1-234 30-229 (246)
456 COG4618 ArpD ABC-type protease 100.0 2.7E-31 5.9E-36 297.2 16.7 209 665-897 324-540 (580)
457 COG4604 CeuD ABC-type enteroch 100.0 5.5E-32 1.2E-36 266.9 9.8 194 1-235 29-225 (252)
458 cd03246 ABCC_Protease_Secretio 100.0 5.6E-31 1.2E-35 275.2 18.0 147 701-897 15-164 (173)
459 PRK14246 phosphate ABC transpo 100.0 1.7E-30 3.6E-35 289.1 22.8 205 675-897 10-221 (257)
460 PRK14266 phosphate ABC transpo 100.0 1.6E-30 3.4E-35 289.4 22.7 204 675-897 3-214 (250)
461 PRK14245 phosphate ABC transpo 100.0 3.8E-31 8.2E-36 294.3 17.6 195 1-234 31-233 (250)
462 TIGR03375 type_I_sec_LssB type 100.0 3.5E-31 7.5E-36 337.0 19.4 197 674-897 462-668 (694)
463 TIGR01193 bacteriocin_ABC ABC- 100.0 3.3E-31 7.2E-36 337.9 19.2 195 675-897 473-677 (708)
464 PRK09580 sufC cysteine desulfu 100.0 1.9E-30 4E-35 288.8 22.6 196 676-888 2-206 (248)
465 COG1123 ATPase components of v 100.0 5.1E-31 1.1E-35 306.1 18.6 192 1-233 319-517 (539)
466 PRK11176 lipid transporter ATP 100.0 1.2E-31 2.7E-36 335.4 14.4 193 2-235 372-567 (582)
467 PRK10418 nikD nickel transport 100.0 8.5E-31 1.8E-35 291.8 19.5 192 1-234 31-229 (254)
468 PRK14264 phosphate ABC transpo 100.0 2.6E-30 5.7E-35 294.4 23.9 206 675-897 45-268 (305)
469 TIGR02323 CP_lyasePhnK phospho 100.0 2.3E-30 4.9E-35 288.7 22.9 200 675-897 3-218 (253)
470 PRK09544 znuC high-affinity zi 100.0 1.5E-30 3.3E-35 287.8 21.2 184 675-897 4-190 (251)
471 PRK14274 phosphate ABC transpo 100.0 5.7E-31 1.2E-35 294.2 18.0 195 1-233 40-241 (259)
472 PRK03695 vitamin B12-transport 100.0 1.2E-30 2.6E-35 289.1 20.2 182 703-897 11-202 (248)
473 COG4598 HisP ABC-type histidin 100.0 2.5E-31 5.4E-36 257.6 12.8 183 697-888 15-213 (256)
474 PRK10982 galactose/methyl gala 100.0 1.1E-30 2.3E-35 319.1 21.6 189 701-897 11-203 (491)
475 PRK13642 cbiO cobalt transport 100.0 6.2E-31 1.3E-35 296.2 17.9 190 1-234 35-228 (277)
476 PRK10744 pstB phosphate transp 100.0 5.3E-31 1.1E-35 294.5 17.2 196 1-234 41-243 (260)
477 cd03248 ABCC_TAP TAP, the Tran 100.0 3.8E-31 8.3E-36 289.8 15.7 202 675-897 11-217 (226)
478 COG0444 DppD ABC-type dipeptid 100.0 2.5E-30 5.5E-35 279.9 21.7 208 676-897 2-223 (316)
479 PRK11160 cysteine/glutathione 100.0 3.3E-31 7.2E-36 328.8 17.1 186 1-235 368-562 (574)
480 TIGR02203 MsbA_lipidA lipid A 100.0 6.7E-31 1.4E-35 328.5 19.9 198 675-898 330-537 (571)
481 PRK11701 phnK phosphonate C-P 100.0 9.4E-31 2E-35 292.3 18.7 191 1-233 34-239 (258)
482 PRK14239 phosphate transporter 100.0 9.3E-31 2E-35 291.8 18.4 196 1-234 33-235 (252)
483 PRK13657 cyclic beta-1,2-gluca 100.0 9.2E-31 2E-35 327.1 20.4 195 675-897 334-538 (588)
484 cd03254 ABCC_Glucan_exporter_l 100.0 6.4E-31 1.4E-35 288.8 16.5 196 675-897 2-206 (229)
485 PRK14262 phosphate ABC transpo 100.0 1E-30 2.2E-35 291.0 18.2 196 1-234 31-233 (250)
486 cd03251 ABCC_MsbA MsbA is an e 100.0 6.8E-31 1.5E-35 289.6 16.4 180 702-897 16-205 (234)
487 PRK14244 phosphate ABC transpo 100.0 9.2E-31 2E-35 291.3 17.6 196 1-233 33-235 (251)
488 TIGR01842 type_I_sec_PrtD type 100.0 1.1E-30 2.3E-35 323.1 20.1 197 675-897 316-522 (544)
489 PRK14252 phosphate ABC transpo 100.0 4.9E-30 1.1E-34 287.6 23.5 205 674-897 15-229 (265)
490 COG4161 ArtP ABC-type arginine 100.0 7.4E-31 1.6E-35 249.6 14.1 188 2-232 31-227 (242)
491 PRK14271 phosphate ABC transpo 100.0 1.5E-30 3.2E-35 292.4 19.1 196 1-234 49-250 (276)
492 PRK14240 phosphate transporter 100.0 1.2E-30 2.6E-35 290.5 18.1 195 1-233 31-232 (250)
493 PRK14272 phosphate ABC transpo 100.0 1.4E-30 3.1E-35 290.3 18.9 193 1-234 32-235 (252)
494 PRK14259 phosphate ABC transpo 100.0 8.1E-31 1.7E-35 293.9 16.9 194 1-234 41-252 (269)
495 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.3E-31 5E-36 339.8 14.1 190 2-235 508-700 (710)
496 PRK14275 phosphate ABC transpo 100.0 1.2E-30 2.6E-35 294.7 18.1 192 1-234 67-269 (286)
497 PRK14263 phosphate ABC transpo 100.0 1.4E-30 3E-35 290.4 18.1 194 1-234 36-244 (261)
498 PRK14237 phosphate transporter 100.0 1.7E-30 3.7E-35 291.2 18.6 195 1-233 48-249 (267)
499 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 8.4E-31 1.8E-35 289.5 15.9 181 701-897 16-206 (238)
500 PRK14248 phosphate ABC transpo 100.0 1.6E-30 3.4E-35 292.1 18.2 195 1-233 49-250 (268)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-192 Score=1739.38 Aligned_cols=1181 Identities=52% Similarity=0.907 Sum_probs=1076.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
|+.++||+||||||||++|+|.++......|+|.+||++.++..+++.++|++|+|.|+|.+||||+|.|+++|++++.+
T Consensus 143 m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r 222 (1391)
T KOG0065|consen 143 MTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSR 222 (1391)
T ss_pred eEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccc
Confidence 58899999999999999999999876666889999999998888888999999999999999999999999999999888
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
++ +..+.+++ .+.+|.+++.+||++|+||+||++.+||+||||||||++|++++
T Consensus 223 ~~---~~~R~e~~-----------------------~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v 276 (1391)
T KOG0065|consen 223 YD---EVSRREKL-----------------------AAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLV 276 (1391)
T ss_pred cc---cccHHHHH-----------------------HHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeee
Confidence 76 23333332 12578999999999999999999999999999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHHHhC
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFFISM 240 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f~~~ 240 (1245)
.+++++++||+|+|||+.++.++++.||.+++..+.+.++.++|++++++++||+|++|++|+++|+||.+++.+||+++
T Consensus 277 ~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~ 356 (1391)
T KOG0065|consen 277 GPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDM 356 (1391)
T ss_pred cCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhc
Confidence 99999999999999999999999999999999989999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCCcccccCCCcc
Q 000872 241 GFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHPAALTTRKYGV 320 (1245)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1245)
||.||++++++||++++++..++.+.|.....++...+..++.+.|.+++.+.++..+.+.++++.+.++.......+.+
T Consensus 357 Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v 436 (1391)
T KOG0065|consen 357 GFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSV 436 (1391)
T ss_pred CccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceec
Confidence 99999999999999999998888888877777777778899999999999999999999998888888888888999999
Q ss_pred cHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHHhhHHHHHHh
Q 000872 321 GKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITFNGMAEISMT 400 (1245)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~ 400 (1245)
+.|.|++.|+.|++..++||...+.+...+.++++++.|++|++.+. .+..+...+.+++||++.+.++++++++...
T Consensus 437 ~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~ 514 (1391)
T KOG0065|consen 437 PYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALT 514 (1391)
T ss_pred cHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999984 4445567788999999999999999999999
Q ss_pred hhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000872 401 IAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQMSSAMFRLIAA 480 (1245)
Q Consensus 401 ~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~ 480 (1245)
++++|+|+|||+..+|++|++.++.+++++|..++.+.+|.+++||++|+.+++++||.++++.++.+.+++++|+++++
T Consensus 515 ~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~ 594 (1391)
T KOG0065|consen 515 FQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIAS 594 (1391)
T ss_pred HhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcccccCCC------------
Q 000872 481 VGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKILPN------------ 548 (1245)
Q Consensus 481 ~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~~~~------------ 548 (1245)
++++...|+.++++.++++.+++||+++..+||+||+|++|++|+.|++++++.|||.+.+|.|.+.+
T Consensus 595 l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~ 674 (1391)
T KOG0065|consen 595 LSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKV 674 (1391)
T ss_pred hcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999887221
Q ss_pred ---CCCcchHHHhhhcCcc-----ccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccCCC
Q 000872 549 ---KTKPLGIEVLDSRGFF-----TDAYWYWLGVGALTGFIILFQFGFTLALSFLNPFGTSKAFISEESQSTEHDSRTGG 620 (1245)
Q Consensus 549 ---~~~~~g~~~l~~~~~~-----~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (1245)
.....|..+++..++. ....|+|+++++++|+.++|.++..+++.++++.......+...+...+.....
T Consensus 675 c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-- 752 (1391)
T KOG0065|consen 675 CAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-- 752 (1391)
T ss_pred chhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh--
Confidence 1245678888888776 778899999999999999999999999999998776665554443222110000
Q ss_pred ccccccccCCCCccccccchhhhhhccCCCCcccccccCCCccCCCCccCCCCeEEEEEeEEEEEecCccccccccccCc
Q 000872 621 TVQLSTCANSSSHITRSESRDYVRRRNSSSQSRETTIETDQPKNRGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDK 700 (1245)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1245)
...........+....+++++..|..+..++++|+.|.++.|.+++.++ ++
T Consensus 753 --------------------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~ 803 (1391)
T KOG0065|consen 753 --------------------------AGSSSEIEKLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GT 803 (1391)
T ss_pred --------------------------ccccccccccccccccccccccCCCccccccccceEEEEeCCccccccc---cc
Confidence 0000000000000111244566677777888999998888887776655 56
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYE 780 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 780 (1245)
+++|+||||.++||.++|+||.||||||||||+|+||.+.|.++|+|.+||.|.++..++|.+|||+|+|.|.+.+||||
T Consensus 804 ~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrE 883 (1391)
T KOG0065|consen 804 RQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRE 883 (1391)
T ss_pred eEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHH
Confidence 78999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCC-CeeEEeCCCCCCC
Q 000872 781 SLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLD 859 (1245)
Q Consensus 781 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p-~il~lDEpTsgLD 859 (1245)
.|.|+|.||+|.+.+.+++.+.||+|++.|+|++++|.+||.++ +|||.+||||++||+||++|| .||||||||||||
T Consensus 884 SL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLD 962 (1391)
T KOG0065|consen 884 SLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLD 962 (1391)
T ss_pred HHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCcc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh----------------------------cCCCCccCCCCCCC
Q 000872 860 ARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA----------------------------GIPGVSKIRDGYNP 911 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~----------------------------~~~~~~~~~~~~np 911 (1245)
++++..|++.+|+++++|+||+||+||||.++|+.||+ ..+|. .|++..||
T Consensus 963 sqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~NP 1041 (1391)
T KOG0065|consen 963 SQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDENP 1041 (1391)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCCh
Confidence 99999999999999999999999999999999999998 11223 45666699
Q ss_pred CccchhcCCchhhhhhhhhHHHHHHhcHHHHHHHHHHHHhcCCCCC-CccccccCCCCChhHHHHHHHHHHHHHHhhcCh
Q 000872 912 ATWMLEVTAPSQEIALGVDFAAIYKSSELYRINKALIQELSKPAPG-SKELYFANQYPLSFFTQCMACLWKQHWSYSRNP 990 (1245)
Q Consensus 912 ad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~ 990 (1245)
|||+||+++...+...+.||++.|++|++++++++.+++++++.++ ..+..+.++|++|+|.|++.++||++..+||+|
T Consensus 1042 A~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp 1121 (1391)
T KOG0065|consen 1042 AEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSP 1121 (1391)
T ss_pred HHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCc
Confidence 9999999998877777889999999999999999999999988877 666777788999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHhHhcCCCCChHH
Q 000872 991 HYTAVRFLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMA 1070 (1245)
Q Consensus 991 ~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~ 1070 (1245)
.|+++|++.+++.||++|++||++|+ ++++++|.+|++|+++++.+..+.....+.+..||.+++||+++|+||+.+
T Consensus 1122 ~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~ 1198 (1391)
T KOG0065|consen 1122 DYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTP 1198 (1391)
T ss_pred HHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHH
Confidence 99999999999999999999999995 578999999999999999988777777788888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhhhheeeeccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 000872 1071 YAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIASIVSTLFYGLWN 1150 (1245)
Q Consensus 1071 y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 1150 (1245)
|++|++++|+|+.++++++|.+|+|+|+|+.+++.+|++|++.++++.++.+.+|+|+.+++||.++|+.+.+.+++++.
T Consensus 1199 ~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~ 1278 (1391)
T KOG0065|consen 1199 FALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWN 1278 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCccccC----------CCCcHHHHHHhhhC----Ccccchh
Q 000872 1151 IVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLE----------SGETVKQFLRSYYG----FKHDFLG 1216 (1245)
Q Consensus 1151 lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~~~~----------~~~~~~~~~~~~~~----~~~~~~~ 1216 (1245)
+||||++|++.||.||+|+||+||+.|.+++++..+++|.+..|. +|.++++|+..+|| +.++...
T Consensus 1279 ~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a 1358 (1391)
T KOG0065|consen 1279 LFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA 1358 (1391)
T ss_pred HhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc
Confidence 999999999999999999999999999999999999999888774 24589999999999 7777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 000872 1217 AVAAVVFVLPSLFAFVFALGIRVLNFQKR 1245 (1245)
Q Consensus 1217 ~~~~il~~~~~~~~~~~~~~l~~~~~~~r 1245 (1245)
....+..+|.+++.+++.+.++|.++++|
T Consensus 1359 ~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1359 TTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred eeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 66667778999999999999999999876
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.1e-185 Score=1808.28 Aligned_cols=1240 Identities=61% Similarity=1.071 Sum_probs=1058.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+||||||||||||+|+|+++|+..++|+|.+||+++++...++.++||+|+|.+++++||+||+.|++++++.+.+
T Consensus 193 ~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~ 272 (1470)
T PLN03140 193 MTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTR 272 (1470)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999876567999999999887665677899999999999999999999999988765444
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
++...+..+.++.....++.+.+.++++...++.+.+..++.+++.+||++|+||.||++.+++|||||||||+||++|+
T Consensus 273 ~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~ 352 (1470)
T PLN03140 273 YDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIV 352 (1470)
T ss_pred ccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhc
Confidence 43333334444443344444555555555555556667789999999999999999999999999999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHHHhC
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFFISM 240 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f~~~ 240 (1245)
++|++++|||||+|||+.++.++++.|+++++..+.++++++||+.++++++||+|++|++|+++|+|+.+++.+||+++
T Consensus 353 ~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~l 432 (1470)
T PLN03140 353 GPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESC 432 (1470)
T ss_pred CCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHc
Confidence 99999999999999999999999999999987556677777788889999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCCcccccCCCcc
Q 000872 241 GFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHPAALTTRKYGV 320 (1245)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1245)
||.||++.|++||+.++.+..+++++|.....+++..+.+++.++|++++.++++.++++.+..+...++.......+..
T Consensus 433 Gf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 512 (1470)
T PLN03140 433 GFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSV 512 (1470)
T ss_pred CCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcC
Confidence 99999999999999999987666555544445555567889999999998887776665544433333333334456888
Q ss_pred cHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHHhhHHHHHHh
Q 000872 321 GKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITFNGMAEISMT 400 (1245)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~ 400 (1245)
+++.|++.++.|++..++||+..+..++++.+++++++|++|++++.+.....++..+.|++||.+...+++++.++...
T Consensus 513 s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~ 592 (1470)
T PLN03140 513 PKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALM 592 (1470)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999976655445566778999999988899999999999
Q ss_pred hhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000872 401 IAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQMSSAMFRLIAA 480 (1245)
Q Consensus 401 ~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~ 480 (1245)
+.++|+|+|||+.++|++++|++++++.++|+.++.+++|++++|||+|+++++++||.++++.++..++++++++++++
T Consensus 593 ~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a 672 (1470)
T PLN03140 593 IQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIAS 672 (1470)
T ss_pred HhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCccccc-CCCCCCcchHHHhh
Q 000872 481 VGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKI-LPNKTKPLGIEVLD 559 (1245)
Q Consensus 481 ~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~-~~~~~~~~g~~~l~ 559 (1245)
+++++.+|+.+++++++++++++||+++.++||.||+|++|+||+.|++++++.|||.+..|.+. +.+.....|.++|+
T Consensus 673 ~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~ 752 (1470)
T PLN03140 673 VCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLN 752 (1470)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988776532 22334578999999
Q ss_pred hcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccCCCccccccccCCCCccccccc
Q 000872 560 SRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLNPFGTSKAFISEESQSTEHDSRTGGTVQLSTCANSSSHITRSES 639 (1245)
Q Consensus 560 ~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (1245)
.+++.....|+|.+++++++++++|.+++++++.+.+............................. ..... ... .
T Consensus 753 ~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~-~- 827 (1470)
T PLN03140 753 IFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLS--SADGN-NTR-E- 827 (1470)
T ss_pred hcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccccc--ccccc-ccc-c-
Confidence 999998889999999999999999999999999988754443332211100000000000000000 00000 000 0
Q ss_pred hhhhhhccCCC----CcccccccCCCccCCCCccCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCe
Q 000872 640 RDYVRRRNSSS----QSRETTIETDQPKNRGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGV 715 (1245)
Q Consensus 640 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge 715 (1245)
.+......... ..............+++.+|..+..++|+|++|.++.+...++.+...+++.+|+|||++++|||
T Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 907 (1470)
T PLN03140 828 VAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGV 907 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCe
Confidence 00000000000 00000000011223445567788899999999999877654444444456689999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCC
Q 000872 716 LTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVN 795 (1245)
Q Consensus 716 ~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~ 795 (1245)
++||||||||||||||++|+|+.+.|..+|+|.+||.+.+...+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.+
T Consensus 908 l~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~ 987 (1470)
T PLN03140 908 LTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVS 987 (1470)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999997766789999999988765556778999999999999999999999999888776666
Q ss_pred HHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh
Q 000872 796 SKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD 875 (1245)
Q Consensus 796 ~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~ 875 (1245)
.+++.++++++++.+||.+++|+.+|.++.++|||||||||+||++|+++|+||||||||||||+.++..+++.|+++++
T Consensus 988 ~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~ 1067 (1470)
T PLN03140 988 KEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD 1067 (1470)
T ss_pred HHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH
Confidence 67777889999999999999999999888889999999999999999999999999999999999999999999999998
Q ss_pred CCCEEEEEecCCCHHHHHHhhhc----------------------------CCCCccCCCCCCCCccchhcCCchhhhhh
Q 000872 876 TGRTVVCTIHQPSIDIFEAFDAG----------------------------IPGVSKIRDGYNPATWMLEVTAPSQEIAL 927 (1245)
Q Consensus 876 ~g~tvi~~~H~p~~~~~~~fd~~----------------------------~~~~~~~~~~~npad~~l~~~~~~~~~~~ 927 (1245)
+|+|||+|+|||+.++++.||+. ++|.++||+++|||||++|+++.+.+...
T Consensus 1068 ~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~ 1147 (1470)
T PLN03140 1068 TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKL 1147 (1470)
T ss_pred CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccc
Confidence 89999999999999999999971 12344689999999999999987655444
Q ss_pred hhhHHHHHHhcHHHHHHHHHHHHhcCCCCCCccccccCCCCChhHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHH
Q 000872 928 GVDFAAIYKSSELYRINKALIQELSKPAPGSKELYFANQYPLSFFTQCMACLWKQHWSYSRNPHYTAVRFLFTIFISLIF 1007 (1245)
Q Consensus 928 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~ 1007 (1245)
..||++.|++|+.+++.++.+++...+.+..++..+.++++.++|+|+++|++|+++++||||.++.+|+++++++|+++
T Consensus 1148 ~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~ 1227 (1470)
T PLN03140 1148 GIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMV 1227 (1470)
T ss_pred cchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHH
Confidence 56899999999999887777776665544444444456789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHhHhcCCCCChHHHHHHHHHHHHHHHHHhH
Q 000872 1008 GTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQA 1087 (1245)
Q Consensus 1008 g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~ 1087 (1245)
|++||+++++..+++++++++|++|++++++++.++++++|.+..||++|+||+++|+|++.+|++|++++|+|+.++.+
T Consensus 1228 G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~ 1307 (1470)
T PLN03140 1228 GTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQT 1307 (1470)
T ss_pred HHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999877677899999999999999999988889999999999999999999999999999999999999999999
Q ss_pred hhhheeeeccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCcCCCCCchhhh
Q 000872 1088 APYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWR 1167 (1245)
Q Consensus 1088 ~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~ 1167 (1245)
++|++|+|||+||++++++||+|++++++..++++++|+++++++|+.++|..+++++++++++||||++|+++||+||+
T Consensus 1308 ~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~ 1387 (1470)
T PLN03140 1308 TYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWV 1387 (1470)
T ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhcHHHHHHHHHHHHhhCCCccccCC-----CCcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000872 1168 WSYWANPIAWTLYGFFASQFGDVQDRLES-----GETVKQFLRSYYGFKHDFLGAVAAVVFVLPSLFAFVFALGIRVLNF 1242 (1245)
Q Consensus 1168 w~~~~sp~~y~~~~~~~n~f~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~ 1242 (1245)
|+||+||++|+++|++.|||++.+.+|.+ ++++.+|++++|||+++++|++++++++|+++|+++++++++++||
T Consensus 1388 W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1388 WYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred HHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999998776543 2467899999999999999999999999999999999999999999
Q ss_pred ccC
Q 000872 1243 QKR 1245 (1245)
Q Consensus 1243 ~~r 1245 (1245)
|||
T Consensus 1468 q~r 1470 (1470)
T PLN03140 1468 QTR 1470 (1470)
T ss_pred ccC
Confidence 998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6.5e-163 Score=1611.43 Aligned_cols=1179 Identities=31% Similarity=0.523 Sum_probs=954.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS-LKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.+++++||+||+.|+++++..
T Consensus 89 ~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~ 168 (1394)
T TIGR00956 89 LTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTP 168 (1394)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCC
Confidence 58999999999999999999997421 125999999998875322 345699999999999999999999998876532
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
..... ...+.+. .++.++.+++.+||++++||.||++.+++|||||||||+||+
T Consensus 169 ~~~~~---~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~ 222 (1394)
T TIGR00956 169 QNRPD---GVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAE 222 (1394)
T ss_pred CCCCC---CCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHH
Confidence 11100 0000000 112346789999999999999999999999999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFF 237 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f 237 (1245)
+|+.+|++++|||||+|||+.++.++++.|+++++..+.++++++||++++++++||+|++|++|+++++|+.+++.+||
T Consensus 223 aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF 302 (1394)
T TIGR00956 223 ASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYF 302 (1394)
T ss_pred HHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999987556677777777789999999999999999999999999999999
Q ss_pred HhCCCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCC-----------
Q 000872 238 ISMGFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKK----------- 306 (1245)
Q Consensus 238 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 306 (1245)
+++|+.||++.|++||+.++.+.++.. .... .+.....+.+++.+.|++++.++++.++.+....+.
T Consensus 303 ~~lG~~~p~~~n~aDfl~~~~~~~~~~-~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (1394)
T TIGR00956 303 EKMGFKCPDRQTTADFLTSLTSPAERQ-IKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRE 380 (1394)
T ss_pred HHcCCCCCCCCChHHHHHhccChhhhh-cccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHH
Confidence 999999999999999999998754321 1111 111123457888899988876665544432211100
Q ss_pred ----CCCCcccccCCCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHH
Q 000872 307 ----NSHPAALTTRKYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGAL 382 (1245)
Q Consensus 307 ----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~ 382 (1245)
...+.......+..+++.|++.+++|++...+||+..+..++++.+++++++|++|++.+.+.. +...+.|++
T Consensus 381 ~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~~~~r~g~l 457 (1394)
T TIGR00956 381 SHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---DFYSRGGAL 457 (1394)
T ss_pred HHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---hHHHHHHHH
Confidence 0000111234577889999999999999999999999999999999999999999999886433 334568899
Q ss_pred HHHHHHHHHhhHHHHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHH
Q 000872 383 FFILTTITFNGMAEISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYL 462 (1245)
Q Consensus 383 f~~~~~~~~~~~~~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l 462 (1245)
||.+.+.++.++.++...+.++++|+||+..++|++++|++++.+.++|+.++.+++|++++|||+|++.++++|+.+++
T Consensus 458 f~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l 537 (1394)
T TIGR00956 458 FFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLL 537 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHH
Confidence 99999988988888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcc
Q 000872 463 LLLIVNQMSSAMFRLIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSW 542 (1245)
Q Consensus 463 ~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~ 542 (1245)
+.++...++++++.++++++++...|+.+++++++++++++||+++.++||.||+|++|+||+.|++++++.|||.+..+
T Consensus 538 ~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~ 617 (1394)
T TIGR00956 538 ILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRF 617 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cccC--C----------------------CCCCcchHHHhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000872 543 KKIL--P----------------------NKTKPLGIEVLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLNPF 598 (1245)
Q Consensus 543 ~~~~--~----------------------~~~~~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~ 598 (1245)
.|.. + +.+...|.++|+. ++.....|.|.+++++++++++|.++.++++.+....
T Consensus 618 ~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~~ 696 (1394)
T TIGR00956 618 ECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKGA 696 (1394)
T ss_pred cccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 6631 1 0113467888884 3444566899999999999999999999999987754
Q ss_pred CCCccccccccccccccccCCCccccccccCCCCccccccchhhhhhccCCCCcccccccCCCcc-CCCCccCCCCeEEE
Q 000872 599 GTSKAFISEESQSTEHDSRTGGTVQLSTCANSSSHITRSESRDYVRRRNSSSQSRETTIETDQPK-NRGMVLPFEPFSLT 677 (1245)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 677 (1245)
..................... . .. . ......++ ........ ...+..... ............++
T Consensus 697 ~~~~~~~~~~~~~~~~~~~~~-~-~~---~--~~~~~~e~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 761 (1394)
T TIGR00956 697 KQKGEILVFRRGSLKRAKKAG-E-TS---A--SNKNDIEA------GEVLGSTD--LTDESDDVNDEKDMEKESGEDIFH 761 (1394)
T ss_pred CCCCceEeeccccccchhhcc-c-cc---c--cccccccc------cccCCCCc--cccccccccccccccccCCCceEE
Confidence 433222222111000000000 0 00 0 00000000 00000000 000000000 00000001123589
Q ss_pred EEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEECCeeCCc
Q 000872 678 FDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITISGYPKNQ 756 (1245)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~g~~~~~ 756 (1245)
|+|++|.++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+.+ ..+|+|.+||.+.+.
T Consensus 762 ~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~ 832 (1394)
T TIGR00956 762 WRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS 832 (1394)
T ss_pred EEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh
Confidence 99999887421 13457999999999999999999999999999999999987644 346999999998753
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000872 757 ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRL 836 (1245)
Q Consensus 757 ~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~ 836 (1245)
.+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.++++++++++++++.+||.+++|+.+|.++. +||||||||+
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl 910 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRL 910 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHH
Confidence 46788999999999999999999999999998776666777788899999999999999999987643 7999999999
Q ss_pred HHHHHHhhCCC-eeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhcC----------------
Q 000872 837 TIAVELVANPS-IIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAGI---------------- 899 (1245)
Q Consensus 837 ~ia~~l~~~p~-il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~~---------------- 899 (1245)
+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||+..
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999999997 9999999999999999999999999988899999999999999999999810
Q ss_pred -----------CCCccCCCCCCCCccchhcCCchhhhhhhhhHHHHHHhcHHHHHHHHHHHHhcCCCCCC---ccccccC
Q 000872 900 -----------PGVSKIRDGYNPATWMLEVTAPSQEIALGVDFAAIYKSSELYRINKALIQELSKPAPGS---KELYFAN 965 (1245)
Q Consensus 900 -----------~~~~~~~~~~npad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 965 (1245)
.|+.+||+++|||||+||+++...+.....++.+.|++|+.++...+.++....+.... .......
T Consensus 991 ~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1394)
T TIGR00956 991 NSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALS 1070 (1394)
T ss_pred ccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccccccc
Confidence 12346899999999999998865443334589999999988776554444433221111 1111224
Q ss_pred CCCChhHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhh
Q 000872 966 QYPLSFFTQCMACLWKQHWSYSRNPHYTAVRFLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSS 1045 (1245)
Q Consensus 966 ~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~ 1045 (1245)
+++.|+|+|+++|++|+++++||||.++++|+++++++|+++|++||++++ +++++++|+|++|+.+++.++. +..
T Consensus 1071 ~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~ 1146 (1394)
T TIGR00956 1071 KYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQ 1146 (1394)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 688999999999999999999999999999999999999999999999987 4678999999999988877765 345
Q ss_pred hhhhHHhhhhHH-HhHhcCCCCChHHHHHHHHHHHHHHHHHhHhhhheeeeccccccccHhH-------HHHHHHHHHHH
Q 000872 1046 VQPVVDLERSVF-YREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAK-------FFWFLFFMFFS 1117 (1245)
Q Consensus 1046 ~~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~-------f~~f~~~~~~~ 1117 (1245)
.+|.++.||.+| +||+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.. |++|++++++.
T Consensus 1147 ~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~ 1226 (1394)
T TIGR00956 1147 YLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMF 1226 (1394)
T ss_pred hhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHH
Confidence 567788888886 8999999999999999999999999999999999999999999988766 99999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCcCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCccccCC-
Q 000872 1118 LLYFTFFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLES- 1196 (1245)
Q Consensus 1118 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~~~~~- 1196 (1245)
.++++++|+++++++|+..+|+.+++++++++++||||++++++||+||+|++|+||++|+++|++.|||++.+..|..
T Consensus 1227 ~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~ 1306 (1394)
T TIGR00956 1227 FLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVK 1306 (1394)
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998766632
Q ss_pred ---------CC--------------------------------cHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHH
Q 000872 1197 ---------GE--------------------------------TVKQFLRSYYGFKHDFLGAVAAVVFVLPSLFAFVFAL 1235 (1245)
Q Consensus 1197 ---------~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 1235 (1245)
|. ++.+|+ ..+|++.++.|+|++++++|++++ +++++
T Consensus 1307 e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l-~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~ 1384 (1394)
T TIGR00956 1307 ELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFL-EPISSKYSGRWRNFGIFIAFIFFN-IIATV 1384 (1394)
T ss_pred ccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHH-HHcCCcccccccchhhhhHHHHHH-HHHHH
Confidence 11 233444 467999999999999999999988 77778
Q ss_pred HHHhhccc
Q 000872 1236 GIRVLNFQ 1243 (1245)
Q Consensus 1236 ~l~~~~~~ 1243 (1245)
++.+....
T Consensus 1385 ~l~~~~r~ 1392 (1394)
T TIGR00956 1385 FFYWLARV 1392 (1394)
T ss_pred hhheEEEc
Confidence 88776443
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.7e-95 Score=885.41 Aligned_cols=556 Identities=31% Similarity=0.540 Sum_probs=481.9
Q ss_pred CCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEEC
Q 000872 672 EPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITIS 750 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~ 750 (1245)
.+.++.|+|+++..+.+. ...+++|+||||+++|||++||||||||||||||++|+||...+ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~--------~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKS--------KKTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCC--------CccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 345789999998875431 13568999999999999999999999999999999999998764 689999999
Q ss_pred CeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 751 GYPKNQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 751 g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
|++.+...+++.+|||+|||.+.|++||+|+|.|+|.+|+|...++++++++|++++++|||.+|+|+++|++..||+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc---------CC-
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG---------IP- 900 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~---------~~- 900 (1245)
||||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||+|+||||+++|++||+. +.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G 253 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSEGEVVYSG 253 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999992 12
Q ss_pred ------------CCccCCCCCCCCccchhcCCch-hhhhhhhhHHHHHHhc------HHHHHHHHHHHHhcCCCCCCccc
Q 000872 901 ------------GVSKIRDGYNPATWMLEVTAPS-QEIALGVDFAAIYKSS------ELYRINKALIQELSKPAPGSKEL 961 (1245)
Q Consensus 901 ------------~~~~~~~~~npad~~l~~~~~~-~~~~~~~~~~~~~~~s------~~~~~~~~~~~~~~~~~~~~~~~ 961 (1245)
|. +||+..|||||++|+.+.+ .... ..+..+.++.. +...+... ...+.-.....
T Consensus 254 ~~~~~~~ff~~~G~-~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~- 327 (613)
T KOG0061|consen 254 SPRELLEFFSSLGF-PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLE---ALEKSLSTSKK- 327 (613)
T ss_pred CHHHHHHHHHhCCC-CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHH---HHhhhcccccc-
Confidence 22 4899999999999998853 1110 00111111111 00011000 00100000000
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 000872 962 YFANQYPLSFFTQCMACLWKQHWSYSRNPHYTAVRFLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVL 1041 (1245)
Q Consensus 962 ~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~ 1041 (1245)
.+.....+||.|+..+++|.+++.+|||.+...|+++.+.+|+++|++||+++++ ..+++++.|++|+.+.++.+.
T Consensus 328 -~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~~~~~f~ 403 (613)
T KOG0061|consen 328 -VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFILSFMTFL 403 (613)
T ss_pred -cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHHHHHHHH
Confidence 1111278999999999999999999999999999999999999999999999763 456679999999999999888
Q ss_pred HhhhhhhhHHhhhhHHHhHhcCCCCChHHHHHHHHHHHHHHHHHhHhhhheeeeccccccccHhHHHHHHHHHHHHHHHH
Q 000872 1042 NVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYF 1121 (1245)
Q Consensus 1042 ~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~ 1121 (1245)
++.+.++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|++|+|||+|++++..+|++|++++++..+++
T Consensus 404 ~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a 483 (613)
T KOG0061|consen 404 SMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVA 483 (613)
T ss_pred HHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCcCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCccccC-----C
Q 000872 1122 TFFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLE-----S 1196 (1245)
Q Consensus 1122 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~~~~-----~ 1196 (1245)
+++|+++++..||...|..+++++++.|++|+||+++.++||+||+|++|+|+++|++||++.|||.+....|. +
T Consensus 484 ~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~ 563 (613)
T KOG0061|consen 484 ESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLC 563 (613)
T ss_pred HHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999986333331 1
Q ss_pred CCcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 000872 1197 GETVKQFLRSYYGFKHDFLGAVAAVVFVLPSLFAFVFALGIRVLNFQKR 1245 (1245)
Q Consensus 1197 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~~~r 1245 (1245)
+...++.++..++++..+.|.++.+++++.++|+++++++|++..+.+|
T Consensus 564 ~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~~ 612 (613)
T KOG0061|consen 564 CESTGEDVLKQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRKR 612 (613)
T ss_pred ccccHHHHHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 2223444456799999999999999999999999999999999777654
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.8e-91 Score=864.25 Aligned_cols=559 Identities=24% Similarity=0.403 Sum_probs=462.7
Q ss_pred CCeEEEEEeEEEEEecCc----------------cccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHh
Q 000872 672 EPFSLTFDEITYSVDMPQ----------------EMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLA 735 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~ 735 (1245)
.+.++.|.+++|.++... ..++..+.++++.+|+|+|++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999986432 0111122344678999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000872 736 GRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL 815 (1245)
Q Consensus 736 g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 815 (1245)
|+.+++..+|+|.+||.+.... .++.+|||+|+|.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999987543 345689999999999999999999999888776555666777889999999999999
Q ss_pred ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHh
Q 000872 816 RQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 895 (1245)
Q Consensus 816 ~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~f 895 (1245)
+|+.+|+...++||||||||++||++|+++|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999988888999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred hhcC----------------------CCCccCCCCCCCCccchhcCCchhhh------h---hhhhHHHHHHhcHHHHHH
Q 000872 896 DAGI----------------------PGVSKIRDGYNPATWMLEVTAPSQEI------A---LGVDFAAIYKSSELYRIN 944 (1245)
Q Consensus 896 d~~~----------------------~~~~~~~~~~npad~~l~~~~~~~~~------~---~~~~~~~~~~~s~~~~~~ 944 (1245)
|+.. .|+ .||+++|||||++|+++.+.+. . ......+.|++.. .+..
T Consensus 275 D~iilL~~G~iv~~G~~~~~~~~f~~~G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~ 352 (659)
T PLN03211 275 DSVLVLSEGRCLFFGKGSDAMAYFESVGF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL-APKV 352 (659)
T ss_pred ceEEEecCCcEEEECCHHHHHHHHHHCCC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc-cHHH
Confidence 9821 122 5899999999999998753210 0 0112233443211 1111
Q ss_pred HHHHHH--hcC-CCC-----CCccc-cccCCCCChhHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCC
Q 000872 945 KALIQE--LSK-PAP-----GSKEL-YFANQYPLSFFTQCMACLWKQHWSYSRNPHYTAVRFLFTIFISLIFGTMFWDMG 1015 (1245)
Q Consensus 945 ~~~~~~--~~~-~~~-----~~~~~-~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~ 1015 (1245)
....+. ... ... ..+.. .....+..+||+|+.+|++|++++ |||+.+...|+++++++|+++|++||+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~ 431 (659)
T PLN03211 353 KAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD 431 (659)
T ss_pred HHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111110 000 000 00000 011235578999999999999988 89999999999999999999999999984
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHhHhcCCCCChHHHHHHHHHHHHHHHHHhHhhhheeee
Q 000872 1016 TKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVY 1095 (1245)
Q Consensus 1016 ~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y 1095 (1245)
..++++|.|++||++++.++.++++.++.|+.||++|+||+.+|+|++++|++|++++|+|+.++.+++|++|+|
T Consensus 432 -----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y 506 (659)
T PLN03211 432 -----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTY 506 (659)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 357899999999999998888888888999999999999999999999999999999999999999999999999
Q ss_pred ccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCcCCCCCchhhhHhHhhcHH
Q 000872 1096 AMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPI 1175 (1245)
Q Consensus 1096 ~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~ 1175 (1245)
||+||++++.+||+|++++++..++++++|+++++++|+..+|+.+++++++++++||||+++ +||+||+|++|+||+
T Consensus 507 ~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~ 584 (659)
T PLN03211 507 WMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTT 584 (659)
T ss_pred EcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHH
Confidence 999999999999999999999999999999999999999999999999999999999999997 799999999999999
Q ss_pred HHHHHHHHHHhhCCCc-----cccCCC----CcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000872 1176 AWTLYGFFASQFGDVQ-----DRLESG----ETVKQFLRSYYGFKHDFLGAVAAVVFVLPSLFAFVFALGIRVLNF 1242 (1245)
Q Consensus 1176 ~y~~~~~~~n~f~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~ 1242 (1245)
+|+++|++.|||++.+ .+|... .....+. ...+++....|.++++|++++++|++++|++|++++|
T Consensus 585 ~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~~ 659 (659)
T PLN03211 585 FYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFV-EEDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIKH 659 (659)
T ss_pred HHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccc-hhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999998653 245321 0111122 2334445568999999999999999999999998876
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.7e-91 Score=867.76 Aligned_cols=543 Identities=30% Similarity=0.476 Sum_probs=476.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCH
Q 000872 700 KLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 700 ~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987653 3589999999988766678889999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 857 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~-~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsg 857 (1245)
+||+.|++.++.+.+...++++++++++++.+||.+++|+.+|+++ .++||||||||++||+||+++|++++|||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999988777777888899999999999999999999864 678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhcC---C------CC------------ccCCCCCCCCccch
Q 000872 858 LDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAGI---P------GV------------SKIRDGYNPATWML 916 (1245)
Q Consensus 858 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~~---~------~~------------~~~~~~~npad~~l 916 (1245)
||+.++..+++.|++++++|+|||+++|||+.+++++||+.. . |. ..||++.|||||++
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~ 276 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYV 276 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence 999999999999999988899999999999999999999921 1 10 25899999999999
Q ss_pred hcCCchhhhh-----hhhhHHHHHHhcHHHHHHHHHHHHhcCCCC---CCccccccCCCCChhHHHHHHHHHHHHHHhhc
Q 000872 917 EVTAPSQEIA-----LGVDFAAIYKSSELYRINKALIQELSKPAP---GSKELYFANQYPLSFFTQCMACLWKQHWSYSR 988 (1245)
Q Consensus 917 ~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R 988 (1245)
|+++.+.+.+ ...++.+.|++++.+++..+.......... ..........+..+|+.|+..+++|++++.||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R 356 (617)
T TIGR00955 277 QVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLR 356 (617)
T ss_pred HHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhc
Confidence 9987543211 123455667766655443332221111110 01111122456789999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHhHhcCCCCCh
Q 000872 989 NPHYTAVRFLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSP 1068 (1245)
Q Consensus 989 ~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~ 1068 (1245)
||.++..|+++++++|+++|++||++++ ++++++++.|++|++++++++.++....+.++.||++|+||+.+|+|++
T Consensus 357 ~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~ 433 (617)
T TIGR00955 357 DPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRV 433 (617)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCH
Confidence 9999999999999999999999999986 4578899999999999998888887888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeeccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 000872 1069 MAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIASIVSTLFYGL 1148 (1245)
Q Consensus 1069 ~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 1148 (1245)
++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|++++++..++++++|+++++++|+..+|+.++++++++
T Consensus 434 ~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~ 513 (617)
T TIGR00955 434 SAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIP 513 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCcc-ccCC------CCcHHHHHHhhhCCcccchhHHHHH
Q 000872 1149 WNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQD-RLES------GETVKQFLRSYYGFKHDFLGAVAAV 1221 (1245)
Q Consensus 1149 ~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i 1221 (1245)
+++|+||+++.++||+||+|++|+||++|+++|++.|||.+.++ +|.. ++..++++++.||++.++.|+++++
T Consensus 514 ~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~~~~~~~i 593 (617)
T TIGR00955 514 FLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNADLYLDLIG 593 (617)
T ss_pred HHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcccHHHHHHH
Confidence 99999999999999999999999999999999999999998765 5642 1122577778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccC
Q 000872 1222 VFVLPSLFAFVFALGIRVLNFQKR 1245 (1245)
Q Consensus 1222 l~~~~~~~~~~~~~~l~~~~~~~r 1245 (1245)
|++|.++|+++++++|++..+++|
T Consensus 594 l~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 594 LVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999877776
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.5e-88 Score=896.66 Aligned_cols=565 Identities=23% Similarity=0.388 Sum_probs=482.9
Q ss_pred CeEEEEEeEEEEEecCcc-------------cc----c--cccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHH
Q 000872 673 PFSLTFDEITYSVDMPQE-------------MK----R--RGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDV 733 (1245)
Q Consensus 673 ~~~l~~~~~~~~~~~~~~-------------~~----~--~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~ 733 (1245)
...+.|+|++........ .. . .+....++.+|+|+|+.++|||++||+||||||||||||+
T Consensus 27 ~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~ 106 (1394)
T TIGR00956 27 KLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKT 106 (1394)
T ss_pred eeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHH
Confidence 567899999877622110 00 0 0122345679999999999999999999999999999999
Q ss_pred HhCCCCC--CeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCC----CCHHHHHH-HHH
Q 000872 734 LAGRKTR--GYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSE----VNSKTREM-FVE 804 (1245)
Q Consensus 734 L~g~~~~--~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~----~~~~~~~~-~v~ 804 (1245)
|+|+... .+.+|+|.+||.+.+. ..+++.++|++|+|.+++.+||+|+|.|++.+|.+.. .+++++++ .++
T Consensus 107 LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1394)
T TIGR00956 107 IASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHIAD 186 (1394)
T ss_pred HhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Confidence 9998532 2468999999987643 2355679999999999999999999999998886532 23444333 357
Q ss_pred HHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEE
Q 000872 805 EVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCT 883 (1245)
Q Consensus 805 ~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~ 883 (1245)
++++.+||.+++|+.+|++.+++|||||||||+||++|+++|+|++|||||+|||+.++..+++.|++++++ |+|||++
T Consensus 187 ~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~ 266 (1394)
T TIGR00956 187 VYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVA 266 (1394)
T ss_pred HHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 789999999999999999889999999999999999999999999999999999999999999999999864 8999999
Q ss_pred ecCCCHHHHHHhhhcC---------C-------------CCccCCCCCCCCccchhcCCchhhh----------hhhhhH
Q 000872 884 IHQPSIDIFEAFDAGI---------P-------------GVSKIRDGYNPATWMLEVTAPSQEI----------ALGVDF 931 (1245)
Q Consensus 884 ~H~p~~~~~~~fd~~~---------~-------------~~~~~~~~~npad~~l~~~~~~~~~----------~~~~~~ 931 (1245)
+|||+.++++.||+.. . |+ .||++.|||||++|+++++.+. ....++
T Consensus 267 ~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF~~lG~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~ 345 (1394)
T TIGR00956 267 IYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYFEKMGF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEF 345 (1394)
T ss_pred ecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHHHHcCC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHH
Confidence 9999999999999821 1 22 5899999999999998865321 123578
Q ss_pred HHHHHhcHHHHHHHHHHHHhcCCC---------------CCCccccccCCCCChhHHHHHHHHHHHHHHhhcChhHHHHH
Q 000872 932 AAIYKSSELYRINKALIQELSKPA---------------PGSKELYFANQYPLSFFTQCMACLWKQHWSYSRNPHYTAVR 996 (1245)
Q Consensus 932 ~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~ 996 (1245)
++.|++|+.+++..+.++...... ...+.......+..|+|+|+++|++|+++++||||.+++.|
T Consensus 346 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r 425 (1394)
T TIGR00956 346 ETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFM 425 (1394)
T ss_pred HHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999988776554443321110 00011112345788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHhHhcCCCCChHHHHHHHH
Q 000872 997 FLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQV 1076 (1245)
Q Consensus 997 ~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~ 1076 (1245)
+++++++|+++|++||++++ ++.++++|.|++||++++.++.++.++ +.+..||+||+||+.+|+|++++|++|++
T Consensus 426 ~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~ 501 (1394)
T TIGR00956 426 VFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASI 501 (1394)
T ss_pred HHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHH
Confidence 99999999999999999986 356789999999999999999887776 45567999999999999999999999999
Q ss_pred HHHHHHHHHhHhhhheeeeccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCC
Q 000872 1077 LIEIPYIFVQAAPYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFI 1156 (1245)
Q Consensus 1077 ~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~ 1156 (1245)
++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..+|+.+++++++++++|+||+
T Consensus 502 l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~ 581 (1394)
T TIGR00956 502 ISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFA 581 (1394)
T ss_pred HHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCccccCC-------------------------C---CcHHHHHHhhh
Q 000872 1157 IPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLES-------------------------G---ETVKQFLRSYY 1208 (1245)
Q Consensus 1157 ~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~~~~~-------------------------~---~~~~~~~~~~~ 1208 (1245)
+|.++||+||+|++|+||++|+|||++.|||++..++|.. | .++.+|+...|
T Consensus 582 i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~ 661 (1394)
T TIGR00956 582 IPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSF 661 (1394)
T ss_pred cChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcC
Confidence 9999999999999999999999999999999988877731 0 14568888789
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000872 1209 GFKHDFLGAVAAVVFVLPSLFAFVFALGIRVLNF 1242 (1245)
Q Consensus 1209 ~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~ 1242 (1245)
|++.+|+|+|++||++|+++|+++++++++|+++
T Consensus 662 ~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 662 QYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999874
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.9e-87 Score=880.17 Aligned_cols=568 Identities=23% Similarity=0.372 Sum_probs=475.8
Q ss_pred CCeEEEEEeEEEEEecCcc-----------------ccc-cc---cccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHH
Q 000872 672 EPFSLTFDEITYSVDMPQE-----------------MKR-RG---VHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTL 730 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~-----------------~~~-~~---~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTL 730 (1245)
+...+.|+|+++..+.... ... .+ ..+.++.+|+|+||.++|||+++|+||||||||||
T Consensus 128 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTL 207 (1470)
T PLN03140 128 PTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTL 207 (1470)
T ss_pred CCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHH
Confidence 4567899999887652110 000 00 11235679999999999999999999999999999
Q ss_pred HHHHhCCCCCC-eeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHH---
Q 000872 731 MDVLAGRKTRG-YITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSE-------VNSKTR--- 799 (1245)
Q Consensus 731 l~~L~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~-------~~~~~~--- 799 (1245)
|++|+|+.++. .++|+|.+||.+.++...++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 208 Lk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~ 287 (1470)
T PLN03140 208 LLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAG 287 (1470)
T ss_pred HHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhcc
Confidence 99999986542 4689999999987554446789999999999999999999999998764321 111111
Q ss_pred ---------------------HHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 800 ---------------------EMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 800 ---------------------~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
+..++++++.+||.+|+||.+|+...+++||||||||+||++|+++|+++||||||+||
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGL 367 (1470)
T PLN03140 288 IFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGL 367 (1470)
T ss_pred CCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCc
Confidence 12367899999999999999999989999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhcC---------C-------------CCccCCCCCCCCccc
Q 000872 859 DARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDAGI---------P-------------GVSKIRDGYNPATWM 915 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~~~---------~-------------~~~~~~~~~npad~~ 915 (1245)
|+.++..+++.|+++++ .|+|||+++|||+.+++++||+.+ . |+ .||++.|||||+
T Consensus 368 Ds~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf-~cP~~~n~ADFl 446 (1470)
T PLN03140 368 DSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGF-KCPERKGTADFL 446 (1470)
T ss_pred cHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCC-CCCCCCChHHHH
Confidence 99999999999999986 489999999999999999999821 1 22 589999999999
Q ss_pred hhcCCchhh-h-----------hhhhhHHHHHHhcHHHHHHHHHHHHhcCCCCCCccccccCCCCChhHHHHHHHHHHHH
Q 000872 916 LEVTAPSQE-I-----------ALGVDFAAIYKSSELYRINKALIQELSKPAPGSKELYFANQYPLSFFTQCMACLWKQH 983 (1245)
Q Consensus 916 l~~~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~ 983 (1245)
+|++++.+. . ....++++.|++|+.+++..+.++.........+.....+.|..+++.|++.|++|++
T Consensus 447 ~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~ 526 (1470)
T PLN03140 447 QEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEW 526 (1470)
T ss_pred HHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHH
Confidence 999986432 1 1134688899999877655433322110000011111234588999999999999999
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHhHhcC
Q 000872 984 WSYSRNPHYTAVRFLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGA 1063 (1245)
Q Consensus 984 ~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~ 1063 (1245)
+.++|||.++..|+++.+++|+++|++||+++.+..+..+.+.+.|++||++++.++.++.++ +.++.||+||+|||.+
T Consensus 527 ~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l-~~~~~~r~vf~ker~~ 605 (1470)
T PLN03140 527 LLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAEL-ALMIQRLPVFYKQRDL 605 (1470)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccchhHHhhhc
Confidence 999999999999999999999999999999986544445567788999999988888776554 6778999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhHhhhheeeeccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 000872 1064 GMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIASIVST 1143 (1245)
Q Consensus 1064 ~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 1143 (1245)
++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++++.++++++++++++++|+..+|+.+++
T Consensus 606 ~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~ 685 (1470)
T PLN03140 606 LFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGA 685 (1470)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCcccc-CC---CCcHHHHHHhhhCCccc--chhH
Q 000872 1144 LFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRL-ES---GETVKQFLRSYYGFKHD--FLGA 1217 (1245)
Q Consensus 1144 ~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~~~-~~---~~~~~~~~~~~~~~~~~--~~~~ 1217 (1245)
++++++++|+||++|.++||+||+|++|+||++|+++|+++|||.+..+.+ .+ ..+.|+.+++.+|+..+ |+|+
T Consensus 686 ~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~ 765 (1470)
T PLN03140 686 LVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWI 765 (1470)
T ss_pred HHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhh
Confidence 999999999999999999999999999999999999999999997765431 11 22345555588999754 6799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 000872 1218 VAAVVFVLPSLFAFVFALGIRVLN 1241 (1245)
Q Consensus 1218 ~~~il~~~~~~~~~~~~~~l~~~~ 1241 (1245)
++++|+||+++|+++++++|++++
T Consensus 766 ~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 766 GVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-82 Score=774.58 Aligned_cols=542 Identities=25% Similarity=0.456 Sum_probs=477.4
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEECCeeCCcccccceEEEEccCCCCCCCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITISGYPKNQETFTRISGYCEQNDIHSPYVT 777 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~lt 777 (1245)
....+|+|+||.++|||++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|++|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999976532 346799999998776444788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEe
Q 000872 778 VYESLLYSAWLRLSSE----VNSKTRE-MFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 852 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~----~~~~~~~-~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 852 (1245)
|||+|.|+++++.+.. ..+.++. +.++.+++.+||.+|+||++|+...||+||||||||++|.+++.+|+++|+|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998733 2222222 2678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhcC---C------C--------C----ccCCCCCC
Q 000872 853 EPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDAGI---P------G--------V----SKIRDGYN 910 (1245)
Q Consensus 853 EpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~~~---~------~--------~----~~~~~~~n 910 (1245)
|+|+|||+.|+.++++.||++++. +.|+++++|||++++|++||+.+ . | + -.||+..+
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~ 365 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKG 365 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccC
Confidence 999999999999999999999865 88999999999999999999932 1 1 1 15899999
Q ss_pred CCccchhcCCchhhh-----------h-hhhhHHHHHHhcHHHHHHHHHHHHhcCCCCCCccccccCCCCChhHHHHHHH
Q 000872 911 PATWMLEVTAPSQEI-----------A-LGVDFAAIYKSSELYRINKALIQELSKPAPGSKELYFANQYPLSFFTQCMAC 978 (1245)
Q Consensus 911 pad~~l~~~~~~~~~-----------~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l 978 (1245)
+|||+.++++..++. . ...++.+.|.+|+.+++.....+.........+.......|..|+|.|++.|
T Consensus 366 ~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c 445 (1391)
T KOG0065|consen 366 TADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKAC 445 (1391)
T ss_pred HHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHH
Confidence 999999999832211 0 1257899999999888765544332222222233334567899999999999
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHH
Q 000872 979 LWKQHWSYSRNPHYTAVRFLFTIFISLIFGTMFWDMGTKTTKQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFY 1058 (1245)
Q Consensus 979 ~~R~~~~~~R~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~ 1058 (1245)
+.|.++.+.||..++..++++.+++|+++|++|++.+- .+..+.+.|.|++||++++..+.++.++ +...+.||||+
T Consensus 446 ~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~~~~pv~~ 522 (1391)
T KOG0065|consen 446 TIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTFQRLPVFY 522 (1391)
T ss_pred HHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHHhhcchHH
Confidence 99999999999999999999999999999999999982 3556788999999999999999988887 44557899999
Q ss_pred hHhcCCCCChHHHHHHHHHHHHHHHHHhHhhhheeeeccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Q 000872 1059 REKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKFFWFLFFMFFSLLYFTFFGMMLVAWTPNHHIA 1138 (1245)
Q Consensus 1059 rE~~~~~Y~~~~y~~a~~~~~~p~~~~~~~~~~~i~Y~~~gl~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~a 1138 (1245)
|||...+|+|++|.++.+++++|+.++.+++|.+|.||++||.+++++||.|++++++...+++++++++++++++...|
T Consensus 523 Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~A 602 (1391)
T KOG0065|consen 523 KHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIA 602 (1391)
T ss_pred HhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCcCCCCCchhhhHhHhhcHHHHHHHHHHHHhhCCCccccCC-CC-------------------
Q 000872 1139 SIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLES-GE------------------- 1198 (1245)
Q Consensus 1139 ~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~~~~n~f~~~~~~~~~-~~------------------- 1198 (1245)
+.++++.+++..+++||++|.++||+||+|++|+||+.|++|++++|||++.+.+|++ ||
T Consensus 603 n~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~ 682 (1391)
T KOG0065|consen 603 NLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATL 682 (1391)
T ss_pred hhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhcccc
Confidence 9999999999999999999999999999999999999999999999999999998861 10
Q ss_pred -----cHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000872 1199 -----TVKQFLRSYYGFKHDFLGAVAAVVFVLPSLFAFVFALGIRVLNFQ 1243 (1245)
Q Consensus 1199 -----~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~l~~~~~~ 1243 (1245)
.+.+|++..|++++.|.|+++||++||.++|.++..+++.|++.-
T Consensus 683 G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 683 GNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred CceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 345788888999999999999999999999999999999998853
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-70 Score=668.77 Aligned_cols=548 Identities=28% Similarity=0.500 Sum_probs=455.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
++||||||||||||||++|+|+.+++..++|+|++||++......++.+|||.|+|.+++++||+|++.|.++++.+.+
T Consensus 58 l~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~- 136 (613)
T KOG0061|consen 58 LLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS- 136 (613)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-
Confidence 5899999999999999999999987557899999999887777778899999999999999999999999998875321
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
... ++.+.++|+++++|||.+|+||+||+...|++||||||||+||..|+
T Consensus 137 ------~~~------------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell 186 (613)
T KOG0061|consen 137 ------LSK------------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELL 186 (613)
T ss_pred ------CCH------------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHH
Confidence 111 12345789999999999999999999888999999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHHHhC
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFFISM 240 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f~~~ 240 (1245)
.||+||+|||||||||+.++.++++.|+++|+. |+++|++||||+.+++++||++++|++|+++|+|+++++.++|+++
T Consensus 187 ~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~ 265 (613)
T KOG0061|consen 187 TDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSL 265 (613)
T ss_pred cCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhC
Confidence 999999999999999999999999999999986 8999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCCcccccCCCcc
Q 000872 241 GFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHPAALTTRKYGV 320 (1245)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1245)
|++||++.||+||+.++.+.++..+...+.. ......+.++..+...+........... ..........
T Consensus 266 G~~~P~~~Npadf~l~l~s~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 334 (613)
T KOG0061|consen 266 GFPCPELENPADFLLDLLSVDSGTRELEEAV------RIAKLINKFSQTDNLKKTLEALEKSLST-----SKKVEIGTSP 334 (613)
T ss_pred CCCCCCcCChHHHHHHHHccCCCchhHHhHH------HHHHHhhhccccchhhhhHHHHhhhccc-----ccccccccCC
Confidence 9999999999999999877431110000000 0000000000000000000000000000 0000011167
Q ss_pred cHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHHhhHH-HHHH
Q 000872 321 GKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITFNGMA-EISM 399 (1245)
Q Consensus 321 ~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~-~~~~ 399 (1245)
+++.|+..+++|.+...+|++.+...++.+.+.+++++|.+|++.+.+.... ....|++++.+....+..+. .+..
T Consensus 335 s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~ 411 (613)
T KOG0061|consen 335 SWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPV 411 (613)
T ss_pred cHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 8999999999999999999999999999999999999999999986544322 35577778877777666655 5777
Q ss_pred hhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000872 400 TIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQMSSAMFRLIA 479 (1245)
Q Consensus 400 ~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~~~~~~~~i~ 479 (1245)
...++++|.||+..++|+.++|++++.+.++|+.++.+++|+.++|||+|++++..+|+.+.+..++....+++++.+++
T Consensus 412 f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~ 491 (613)
T KOG0061|consen 412 FPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFIS 491 (613)
T ss_pred hHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcccccCC--CCCCcchHHH
Q 000872 480 AVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKILP--NKTKPLGIEV 557 (1245)
Q Consensus 480 ~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~~~--~~~~~~g~~~ 557 (1245)
++.++...+..+++++.+.+++++||+++.+.+|.||+|+.|+|..+|++++++.|+|.+....|... ..+...+.++
T Consensus 492 ~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~ 571 (613)
T KOG0061|consen 492 AIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDV 571 (613)
T ss_pred HhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999733333222 3456678888
Q ss_pred hhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000872 558 LDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLN 596 (1245)
Q Consensus 558 l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~ 596 (1245)
++..++... ..|.++.++.++++++.+..++++.+..
T Consensus 572 l~~~~~~~~--~~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 572 LKQLGFEDS--SFWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred HHhcCCccc--ccchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 888777544 4588899999999999999999887643
No 11
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.1e-71 Score=695.87 Aligned_cols=739 Identities=20% Similarity=0.261 Sum_probs=406.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
++||+|+.||||||||.+|+|+++.. +|+|.++| .++||||++| +.+.||||||.|+..++ .++
T Consensus 549 lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pW-I~ngTvreNILFG~~~d--~~r 612 (1381)
T KOG0054|consen 549 LVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPW-IQNGTVRENILFGSPYD--EER 612 (1381)
T ss_pred EEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccH-hhCCcHHHhhhcCcccc--HHH
Confidence 47999999999999999999999865 99999999 4899999887 55789999999998765 479
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
|+.+.++|.+++|.+.+|++| .|.||++++ +||||||||+++|||+|
T Consensus 613 Y~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nLSGGQKqRIsLARAVY 659 (1381)
T KOG0054|consen 613 YDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NLSGGQKQRISLARAVY 659 (1381)
T ss_pred HHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CCcHhHHHHHHHHHHHh
Confidence 999999999999999998888 499999988 59999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH---HH
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ---FF 237 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~---~f 237 (1245)
+++||++||+|+|++|+++..++++.+- ....+++|+|.+|| .-+..+.+|+|++|++|+|...|+++|+.+ .|
T Consensus 660 ~~adIYLLDDplSAVDahvg~~if~~ci--~~~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~ 736 (1381)
T KOG0054|consen 660 QDADIYLLDDPLSAVDAHVGKHIFEECI--RGLLRGKTVILVTH-QLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDF 736 (1381)
T ss_pred ccCCEEEEcCcchhhhHhhhHHHHHHHH--HhhhcCCEEEEEeC-chhhhhhCCEEEEecCCeEecccCHHHHHhcchhH
Confidence 9999999999999999999999998775 33456778888888 457778899999999999999999999863 12
Q ss_pred HhCCCCCCCCCChhhHHHHhcCccchhhhh-hcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCCcccccC
Q 000872 238 ISMGFKCPKRKGIADFLQEVTSRKDQEQYW-VRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHPAALTTR 316 (1245)
Q Consensus 238 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1245)
.++ ....+.++.. .............+.. . +.... .+...+...............+.+
T Consensus 737 ~~l-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ee~ 796 (1381)
T KOG0054|consen 737 AEL-----------------AHEEESEQEEEASEKDLESGESSRESE-S-RSLES-LSSEEEKSKDEKEEEDKLVQEEER 796 (1381)
T ss_pred HHH-----------------hhccchhhccccccccccccccccchh-h-hhhhh-hcccccccccccchhhHHHHHHHH
Confidence 111 0000000000 0000000000000000 0 00000 000000000000000000001111
Q ss_pred CCcccHHHHHHHHHHHHHHHHhcChHH-HHH-HHHHHHH-HHHHHHHHhccccCCCCCc-----ccccchhhHHHHH---
Q 000872 317 KYGVGKKELLKACFSREHLLMKRNSFV-YIF-RLTQVMF-LAVIGMTIFLRTKMHRDSL-----TDGVIYTGALFFI--- 385 (1245)
Q Consensus 317 ~~~~~~~~~~~~~~~r~~~~~~r~~~~-~~~-~~~~~~~-~~li~g~~~~~~~~~~~~~-----~~~~~~~g~~f~~--- 385 (1245)
..+.-.+..++.+++.. ..+. ..+ .+..... ...+...+|+..+.+.... .+...+.+.....
T Consensus 797 ~~G~v~~~vY~~Y~~a~------~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~ 870 (1381)
T KOG0054|consen 797 ETGKVSWSVYKKYIKAA------GGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVA 870 (1381)
T ss_pred hcCEeeHHHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHH
Confidence 22333333333332210 1111 111 1111112 2223344555554433211 0111122211111
Q ss_pred -HHHHHHhhHHHHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccC-hhHHHHHH--
Q 000872 386 -LTTITFNGMAEISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSN-AGRFFKQY-- 461 (1245)
Q Consensus 386 -~~~~~~~~~~~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~-~~~f~~~~-- 461 (1245)
.....+.++......+.... ...--+...+...|+++ |+.+ .||.++++
T Consensus 871 ~~~~~~~rs~~~~~~~l~aS~------------~Lh~~ml~~Ilrapm~F---------------FdtTP~GRILNRFSk 923 (1381)
T KOG0054|consen 871 SSLLTLLRSFLFAKGGLKASR------------KLHDKLLNSILRAPMSF---------------FDTTPTGRILNRFSK 923 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHhCcchh---------------cCCCCccchhhhccc
Confidence 11111111111111100000 01112333444555555 4444 25544443
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHH
Q 000872 462 -------LLLLIVNQMSSAMFRLIAAVG----RSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQN 530 (1245)
Q Consensus 462 -------l~~~~~~~~~~~~~~~i~~~~----~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~ 530 (1245)
.+......+...+..+++.+. .++.....+.++.++..++-.-|.....++++.- ....||++-.+.
T Consensus 924 D~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLe--sitRSPi~sh~~ 1001 (1381)
T KOG0054|consen 924 DIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLE--SITRSPIYSHFS 1001 (1381)
T ss_pred chHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh--hcccchHHHhHH
Confidence 222223333333332222221 1222222222222221111111111111111110 012344443332
Q ss_pred HHHHhhcCCCcccccCCCCCCcchHHHhhhcCcc------ccCcchhHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 000872 531 AIVVNEFLGNSWKKILPNKTKPLGIEVLDSRGFF------TDAYWYWLGVGA-LTGFIILFQFGFTLALSFLNPFGTSKA 603 (1245)
Q Consensus 531 al~~~ef~~~~~~~~~~~~~~~~g~~~l~~~~~~------~~~~~~~~~~~~-l~~~~i~~~~~~~~~l~~~~~~~~~~~ 603 (1245)
.-+..--.-+.+ +.....-.+.....+.+ ......|+.+.. +++..+++.++....+........+..
T Consensus 1002 Etl~GlsTIRAf-----~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~v 1076 (1381)
T KOG0054|consen 1002 ETLQGLSTIRAF-----GKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLV 1076 (1381)
T ss_pred HHhcCcceeeec-----cccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchH
Confidence 222110000000 00000000111111111 111124666554 233333333333322222111111110
Q ss_pred c--cccccccccccccCCCccccccccCCCCccccccchhhhhhccCCCCcccccccCCCccCCCCccCCCCeEEEEEeE
Q 000872 604 F--ISEESQSTEHDSRTGGTVQLSTCANSSSHITRSESRDYVRRRNSSSQSRETTIETDQPKNRGMVLPFEPFSLTFDEI 681 (1245)
Q Consensus 604 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 681 (1245)
. +++.-..... .... ++ ..+......+..++..+|....++..+..+...++..|+..| .++|+|+
T Consensus 1077 GLslsyal~lt~~--l~~~-vR-~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G--------~I~f~~~ 1144 (1381)
T KOG0054|consen 1077 GLSLSYALQLTGL--LQWL-VR-QSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKG--------EIEFEDL 1144 (1381)
T ss_pred HHHHHHHHHHHHH--HHHH-HH-HHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCC--------eEEEEEe
Confidence 0 1110000000 0000 00 000000011123334455443333111111111334444444 7999999
Q ss_pred EEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---cc
Q 000872 682 TYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ET 758 (1245)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~ 758 (1245)
+.+|.. +...+|||||++|+|||++||+|++|||||||+++|.+..++ .+|+|.|||.++.+ .+
T Consensus 1145 ~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~--~~G~I~IDgvdI~~igL~d 1211 (1381)
T KOG0054|consen 1145 SLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEP--AEGEILIDGVDISKIGLHD 1211 (1381)
T ss_pred EEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCc--cCCeEEEcCeecccccHHH
Confidence 887742 334699999999999999999999999999999999997664 48999999999876 46
Q ss_pred ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCCcCCHHH
Q 000872 759 FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVG------LPGVNGLSTEQ 832 (1245)
Q Consensus 759 ~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~~lSgGe 832 (1245)
+|++.+.+|||+.++.. |+|.|| |+..+..++.++++|+..+|.+...+..+ .+++.++|-||
T Consensus 1212 LRsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQ 1280 (1381)
T KOG0054|consen 1212 LRSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQ 1280 (1381)
T ss_pred HHhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHH
Confidence 78889999999988753 666665 67777788889999999998876544332 13456799999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
||.+|+||||+++++||+|||+|+++|++|+..|+++||+.++ +||||+++|+.+
T Consensus 1281 RQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~ 1335 (1381)
T KOG0054|consen 1281 RQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN 1335 (1381)
T ss_pred HHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc
Confidence 9999999999999999999999999999999999999999875 799999999876
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.2e-69 Score=674.11 Aligned_cols=551 Identities=27% Similarity=0.429 Sum_probs=452.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++||+|||.|+++++.....
T Consensus 53 ~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~ 132 (617)
T TIGR00955 53 LLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRV 132 (617)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCC
Confidence 58999999999999999999998875456899999999876545567899999999999999999999999876532111
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc-ccccccccchhhHHHHHH
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEM-LRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~-~~~LSGGqrqRv~ia~al 159 (1245)
.+. +.+..++++++.+||++++||.||+++ .++||||||||++||++|
T Consensus 133 -------~~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL 181 (617)
T TIGR00955 133 -------TKK------------------------EKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASEL 181 (617)
T ss_pred -------CHH------------------------HHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHH
Confidence 000 112347889999999999999999864 678999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHHHh
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFFIS 239 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f~~ 239 (1245)
+++|++++|||||+|||+.++.++++.|+++++ .+.++|+++||++.++.+.||++++|++|+++|+|+++++.+||++
T Consensus 182 ~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~~ 260 (617)
T TIGR00955 182 LTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFSD 260 (617)
T ss_pred HcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999986 3667777777777899999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCC---CCCCcccccC
Q 000872 240 MGFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKK---NSHPAALTTR 316 (1245)
Q Consensus 240 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 316 (1245)
+|++||++.|++|++.++.+.....+. ......+++.+.++.++..++............ ..........
T Consensus 261 ~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (617)
T TIGR00955 261 LGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGI 333 (617)
T ss_pred cCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHhhhhhcccccccccccccccc
Confidence 999999999999999988764322110 000112334444544443333222211110000 0000111223
Q ss_pred CCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHHhhHH-
Q 000872 317 KYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITFNGMA- 395 (1245)
Q Consensus 317 ~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~- 395 (1245)
.+..+++.|+..+++|.+...+||+..+..++++.+++++++|++|++.+.+.. ......|++|+.+....+.++.
T Consensus 334 ~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~~~g~lf~~~~~~~f~~~~~ 410 (617)
T TIGR00955 334 GYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQNINGALFLFLTNMTFQNVFP 410 (617)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999998875432 2344567788887777776554
Q ss_pred HHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000872 396 EISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQMSSAMF 475 (1245)
Q Consensus 396 ~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~~~~~~ 475 (1245)
.+.....++++|.||+..++|++.+|++++.+.++|..++.+++|.+++|||+|++.++.+|+.++++.++...++.+++
T Consensus 411 ~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~ 490 (617)
T TIGR00955 411 VINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFG 490 (617)
T ss_pred HHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCccc-ccCC---CCCC
Q 000872 476 RLIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWK-KILP---NKTK 551 (1245)
Q Consensus 476 ~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~-~~~~---~~~~ 551 (1245)
.++++++++..+|..+++++++++++++||+++.+++|.||+|++|+||+.|++++++.|||.+..+. |... +.+.
T Consensus 491 ~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~ 570 (617)
T TIGR00955 491 YLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCP 570 (617)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887653 2211 1233
Q ss_pred cchHHHhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000872 552 PLGIEVLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFL 595 (1245)
Q Consensus 552 ~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~ 595 (1245)
..|.++++.+++... +.|.++++++++.++|.+..+++|.+.
T Consensus 571 ~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 571 SSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred cChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458899998887654 458899999999999999999988753
No 13
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2e-68 Score=660.57 Aligned_cols=547 Identities=22% Similarity=0.360 Sum_probs=424.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+|||||||||||++|+|+.+|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++....
T Consensus 96 ~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~- 172 (659)
T PLN03211 96 ILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS- 172 (659)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-
Confidence 47999999999999999999998864 3589999999987532 23569999999999999999999999875432100
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
.... +.++.++++++.+||++++||.+|++..++||||||||++||++|+
T Consensus 173 ------~~~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 173 ------LTKQ------------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred ------CCHH------------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 0000 1123467899999999999999999999999999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHHHhC
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFFISM 240 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f~~~ 240 (1245)
++|+|++|||||+|||+.++.++.+.|+++++ .++++++++||+..++.++||++++|++|++++.|+.+++.+||+++
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~ 301 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESV 301 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHC
Confidence 99999999999999999999999999999976 35565565555555799999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCC---CCCCCC-----CCCc-
Q 000872 241 GFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGI---PFDKKN-----SHPA- 311 (1245)
Q Consensus 241 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~- 311 (1245)
|++||.+.||+||+.++.+.+...+.....+.+ ...++..+.|+... ..+..+.... ...... ..+.
T Consensus 302 G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (659)
T PLN03211 302 GFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEH 377 (659)
T ss_pred CCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhccccccc
Confidence 999999999999999998654221000000000 01122223332111 0000000000 000000 0000
Q ss_pred ccccCCCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHH
Q 000872 312 ALTTRKYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITF 391 (1245)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~ 391 (1245)
......+..+++.|+..+++|++.. +|+......++++.+++++++|++|++.+ ....+...|++||.+.+..+
T Consensus 378 ~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~ 451 (659)
T PLN03211 378 RSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGV 451 (659)
T ss_pred ccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 0011223467899999999999887 78888788999999999999999999874 12334567888888666554
Q ss_pred -hhHHHHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHH
Q 000872 392 -NGMAEISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQM 470 (1245)
Q Consensus 392 -~~~~~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~ 470 (1245)
..+..+.....++++|+||+..++|++.+|++++.+.++|+.++.+++|+.++|||+|++.++++|+.++++.++...+
T Consensus 452 ~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~ 531 (659)
T PLN03211 452 FPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLV 531 (659)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4456777777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcc-----ccc
Q 000872 471 SSAMFRLIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSW-----KKI 545 (1245)
Q Consensus 471 ~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~-----~~~ 545 (1245)
+++++.+++++++++..|+.+++++.+++++++||+++ ++|.||+|++|+||+.|++++++.|||.+... .|.
T Consensus 532 ~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~ 609 (659)
T PLN03211 532 SQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCS 609 (659)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCC
Confidence 99999999999999999999999999999999999997 79999999999999999999999999976432 221
Q ss_pred CCCCCCcchHHHhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000872 546 LPNKTKPLGIEVLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFL 595 (1245)
Q Consensus 546 ~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~ 595 (1245)
.+......+..++....+. ....|.++.+++++++++.++.+++|.+.
T Consensus 610 ~~~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 610 LPHGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred CcccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1100000011122222222 23468899999999999999998888654
No 14
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-69 Score=661.72 Aligned_cols=193 Identities=28% Similarity=0.414 Sum_probs=162.5
Q ss_pred CCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECC
Q 000872 672 EPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISG 751 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g 751 (1245)
-...++++|+++.|+.. +..++|+|+|++|++||.+||+|||||||||.+.+|-+..+ +.+|.|.|||
T Consensus 984 ~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V~IDg 1051 (1228)
T KOG0055|consen 984 VKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKVKIDG 1051 (1228)
T ss_pred ceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 34579999999998643 34579999999999999999999999999999999997654 4689999999
Q ss_pred eeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCCccccccccc
Q 000872 752 YPKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMEL-------VELNPLRQALVG 821 (1245)
Q Consensus 752 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~-------l~l~~~~~~~~g 821 (1245)
.+++. ..+|+.+|.|.|++.++. -|++||+.|+. .+.+.++. .++.+. .+|.+-.||.+|
T Consensus 1052 ~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~eI----i~Aak~ANaH~FI~sLP~GyDT~vG 1121 (1228)
T KOG0055|consen 1052 VDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEEI----IEAAKLANAHNFISSLPQGYDTRVG 1121 (1228)
T ss_pred cccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHHH----HHHHHHhhhHHHHhcCcCcccCccC
Confidence 98765 456788999999999986 59999999971 11333332 222222 466777899999
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 822 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 822 ~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
..+. +||||||||++||||+++||+||+|||+||.||+++.+.++++|.+.. .|||.|+++|++|
T Consensus 1122 erG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS 1186 (1228)
T KOG0055|consen 1122 ERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS 1186 (1228)
T ss_pred cccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh
Confidence 8765 599999999999999999999999999999999999999999999875 6999999999997
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.3e-64 Score=663.86 Aligned_cols=201 Identities=27% Similarity=0.406 Sum_probs=172.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..++. .++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4788898876631 124699999999999999999999999999999999998664 489999999886
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.+||.+.+|..++ .|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHH
Confidence 42 2345679999999999999999999998877663 2344455678899999999988887654 699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||+||+.+|+||+|||||+|||+.+++.+++.|++++++|+|||+|+|++. ++-...|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDr 2139 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTR 2139 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998878999999999975 55566777
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.6e-64 Score=673.52 Aligned_cols=195 Identities=23% Similarity=0.291 Sum_probs=163.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++|+|++++|.. +.+++|+|+|++|+|||++||+||||||||||+++|.|..++ .+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEec
Confidence 6999999998842 123599999999999999999999999999999999998664 489999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 824 (1245)
.+ ..+|+.+++|||++.++.. |+||||.+.. +..++.++++++..++.+ -.|+.+|..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~----------~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN----------EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC----------CCCHHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 54 4678889999999999875 9999996421 122345677777777753 346666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||+||||||+++|+||+||||||+||++|+..|++.|++.. +++|||+++|+++. ...+|+
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~t--I~~~Dr 1441 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDR 1441 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHH--HHhCCE
Confidence 34699999999999999999999999999999999999999999999886 48999999999863 345787
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.2e-63 Score=664.65 Aligned_cols=195 Identities=21% Similarity=0.277 Sum_probs=162.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++|+|++++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEEh
Confidence 6899999998831 224699999999999999999999999999999999998664 489999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 824 (1245)
++ ..+|+.++||||++.+++. |+||||.+.. +..++.++++++..++.+. .|+.+|..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~----------~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS----------EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC----------CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 54 5678889999999999875 9999996421 1223456777887777543 35666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||+||||||+++|+||+||||||+||++|+..|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~Dr 1438 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDK 1438 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCE
Confidence 34699999999999999999999999999999999999999999999875 4899999999985 3345787
No 18
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.1e-62 Score=654.56 Aligned_cols=195 Identities=19% Similarity=0.209 Sum_probs=162.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++|+|++++|+. +...+|+|||++|+|||++||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEEc
Confidence 6999999998842 113599999999999999999999999999999999997654 489999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 824 (1245)
++ ..+|+.++||||++.++.. |+||||... + +..++.++++++..++.+. .|+.+|..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~-------~---~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF-------S---QYSDEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc-------c---CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 54 4678889999999999975 999999521 1 1223447778888877643 46666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||+||||||+++|+||+||||||+||++|+..|++.|++.. +++|||+++|+++. ...+|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~t--i~~~Dr 1488 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLNT--IMDYTR 1488 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHH--HHhCCE
Confidence 35699999999999999999999999999999999999999999999875 48999999999853 445677
No 19
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.5e-60 Score=548.18 Aligned_cols=444 Identities=27% Similarity=0.325 Sum_probs=329.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS-LKASGKVTYNGHDMHEFVP-------QRTAAYISQHD--IHIGEMTVRETLAF 70 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~--~~~~~~Tv~e~l~f 70 (1245)
+++|+|+|||||||+.++|.|.+++. ...+|+|.++|+++..... .+.++|++|++ .|-|-+||.+.|.-
T Consensus 37 ~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E 116 (539)
T COG1123 37 ILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIRE 116 (539)
T ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHH
Confidence 47999999999999999999999876 3468999999987644332 26799999996 46677899998886
Q ss_pred HHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccc
Q 000872 71 SARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1245)
....+.... ..+++..+.++++..||++.... ++..+.||||||
T Consensus 117 ~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~r 160 (539)
T COG1123 117 ALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMR 160 (539)
T ss_pred HHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHH
Confidence 655442110 11234456779999999987665 567788999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
|||.||+||+.+|++||+||||++||+.++.+|++.|+++.++ .+++++.|||+...+.++||||+||++|++++.|+.
T Consensus 161 QRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 161 QRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 9999999999999999999999999999999999999999865 578889999999999999999999999999999999
Q ss_pred hhHHHHHHhCCCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCC
Q 000872 231 EHVEQFFISMGFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHP 310 (1245)
Q Consensus 231 ~~~~~~f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1245)
+++.+ .|.|......+...
T Consensus 240 ~~i~~--------~p~hpYT~~Ll~a~----------------------------------------------------- 258 (539)
T COG1123 240 EEILS--------NPQHPYTRGLLAAV----------------------------------------------------- 258 (539)
T ss_pred HHHHh--------ccCCcccHHHHhhC-----------------------------------------------------
Confidence 88743 11111000000000
Q ss_pred cccccCCCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHH
Q 000872 311 AALTTRKYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTIT 390 (1245)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~ 390 (1245)
T Consensus 259 -------------------------------------------------------------------------------- 258 (539)
T COG1123 259 -------------------------------------------------------------------------------- 258 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhHHHHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHH
Q 000872 391 FNGMAEISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQM 470 (1245)
Q Consensus 391 ~~~~~~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~ 470 (1245)
T Consensus 259 -------------------------------------------------------------------------------- 258 (539)
T COG1123 259 -------------------------------------------------------------------------------- 258 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcccccCCCCC
Q 000872 471 SSAMFRLIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKILPNKT 550 (1245)
Q Consensus 471 ~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~~~~~~ 550 (1245)
|... . ..
T Consensus 259 ------------------------------------------p~~~-----------------------~-~~------- 265 (539)
T COG1123 259 ------------------------------------------PRLG-----------------------D-EK------- 265 (539)
T ss_pred ------------------------------------------CCcc-----------------------c-cc-------
Confidence 0000 0 00
Q ss_pred CcchHHHhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccCCCccccccccCC
Q 000872 551 KPLGIEVLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLNPFGTSKAFISEESQSTEHDSRTGGTVQLSTCANS 630 (1245)
Q Consensus 551 ~~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1245)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccchhhhhhccCCCCcccccccCCCccCCCCccCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEE
Q 000872 631 SSHITRSESRDYVRRRNSSSQSRETTIETDQPKNRGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGA 710 (1245)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~ 710 (1245)
... . .... +.. ...-++.+|++..+..+..+. ....+...+++||||+
T Consensus 266 ---~~~-----------~-------~~~~--~~~-------~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~ 313 (539)
T COG1123 266 ---IIR-----------L-------PRRG--PLR-------AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFD 313 (539)
T ss_pred ---ccc-----------c-------cccc--ccc-------cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeE
Confidence 000 0 0000 000 011355666665554322111 0001334689999999
Q ss_pred EeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC--Cc---ccccceEEEEccC--CCCCCCCCHHHHHH
Q 000872 711 FRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK--NQ---ETFTRISGYCEQN--DIHSPYVTVYESLL 783 (1245)
Q Consensus 711 i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~--~~---~~~~~~~~~v~q~--~~~~~~ltv~e~l~ 783 (1245)
+++||++||+|.||||||||.++|+|..++ .+|+|.++|.+. +. ...++.+-+++|+ ..+.|.+||++.+.
T Consensus 314 l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~ 391 (539)
T COG1123 314 LREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILA 391 (539)
T ss_pred ecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHH
Confidence 999999999999999999999999998765 489999999762 11 1234455556665 45789999999997
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHH
Q 000872 784 YSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 862 (1245)
Q Consensus 784 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~ 862 (1245)
-...... .....+++++|.++++.+||.. ..+.. ...||||||||++|||||+.+|++|++|||||.||+.+
T Consensus 392 epL~~~~--~~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsv 464 (539)
T COG1123 392 EPLRIHG--GGSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSV 464 (539)
T ss_pred hHHhhhc--ccchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHH
Confidence 6554433 2235677788999999999985 23332 45799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 863 AAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 863 ~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+..|.+.|+++.++ |.|.|+++|+.. -+-...|+
T Consensus 465 qa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~dr 499 (539)
T COG1123 465 QAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADR 499 (539)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCce
Confidence 99999999999765 999999999975 22334455
No 20
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.1e-59 Score=628.14 Aligned_cols=196 Identities=23% Similarity=0.243 Sum_probs=164.3
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++|+|++++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEE
Confidence 36999999998842 223599999999999999999999999999999999998664 48999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 823 (1245)
+.. ..+|+.++||||++.++.. |+||||... .+..++.++++++..++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~----------~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF----------LEASSAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc----------cCCCHHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4678899999999998875 999999421 11223557888888888653 46667654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhC-CCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~-p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||+||||||+++ |+||+||||||+||++++..|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~Dr 1513 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDK 1513 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCE
Confidence 356999999999999999996 89999999999999999999999999875 4799999999984 4567887
No 21
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3e-59 Score=626.93 Aligned_cols=195 Identities=21% Similarity=0.248 Sum_probs=164.4
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++|+|++++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|..+ .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36999999998842 22469999999999999999999999999999999999864 37999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 823 (1245)
++. ..+|+.++||||++.+++. |+||||... .+..++.++++++..+|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~----------~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY----------EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc----------cCCCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 764 4577889999999999975 999999421 12234567889998888643 46666653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||+||||||+++|+||+||||||+||..++..|++.|++.. +++|||+++|+++ ....+|+
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~Dr 1420 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQ 1420 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCE
Confidence 45699999999999999999999999999999999999999999999875 4799999999985 4456887
No 22
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.2e-60 Score=627.18 Aligned_cols=200 Identities=20% Similarity=0.334 Sum_probs=164.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-------------
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG------------- 741 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~------------- 741 (1245)
.++|+|++|+|+.. +.+++|+|+|++|+|||++||+||||||||||+++|.|..++.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 69999999988521 1236999999999999999999999999999999999976541
Q ss_pred ---------------------------------------eeEEEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHH
Q 000872 742 ---------------------------------------YITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 742 ---------------------------------------~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
+.+|+|.+||.++.+ ..+|+.++||+|++.++. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 148999999998753 567889999999998884 7999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEe
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-------PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 852 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 852 (1245)
||+.|+. + +.+. +.++++++..++. +-.||.+|..+ ..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9998852 1 2222 3356666665554 34588888654 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhhh
Q 000872 853 EPTSGLDARAAAVVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 853 EpTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+||++++..|++.|+++. .+++|+|+++|+++ .....|+
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~ 1427 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDK 1427 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCE
Confidence 9999999999999999999886 35899999999985 3466776
No 23
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-59 Score=575.28 Aligned_cols=190 Identities=20% Similarity=0.336 Sum_probs=154.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCC---CCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQND---IHS 773 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~ 773 (1245)
+.+|+|+|++|++||++||+||||||||||+++|+|..++ +.+|+|.++|.++... ..++.++|++|+. .++
T Consensus 275 ~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 353 (506)
T PRK13549 275 IKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIV 353 (506)
T ss_pred cccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCc
Confidence 3589999999999999999999999999999999997642 1389999999876421 2345689999985 467
Q ss_pred CCCCHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000872 774 PYVTVYESLLYSAWLRLSS--EVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 850 (1245)
Q Consensus 774 ~~ltv~e~l~~~~~lr~~~--~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~ 850 (1245)
+.+||.|++.+....+... ....++..+.++++++.+++. +..+..+ +.||||||||++||++|+.+|++|+
T Consensus 354 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lll 428 (506)
T PRK13549 354 PVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILI 428 (506)
T ss_pred CCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 7899999998753211110 012233445688999999996 4566554 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 851 MDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 851 lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 429 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~ 474 (506)
T PRK13549 429 LDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDR 474 (506)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999888999999999985 55566776
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-59 Score=573.56 Aligned_cols=187 Identities=22% Similarity=0.348 Sum_probs=153.1
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCC---CCCCC
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQND---IHSPY 775 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 775 (1245)
+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++... ..++.+||++|+. .+++.
T Consensus 267 ~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 344 (501)
T PRK10762 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLG 344 (501)
T ss_pred CcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCC
Confidence 69999999999999999999999999999999998654 489999999876431 2345689999995 46788
Q ss_pred CCHHHHHHHHHHhcCCC---CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 776 VTVYESLLYSAWLRLSS---EVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 776 ltv~e~l~~~~~lr~~~---~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
+||.|++.+........ ....++.++.++++++.+|+. +..+..+ ..||||||||++||++|+.+|++|+|
T Consensus 345 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllL 419 (501)
T PRK10762 345 MSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLIL 419 (501)
T ss_pred CcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 99999998753211100 112233445688999999995 5566554 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 420 DEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~ 464 (501)
T PRK10762 420 DEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDR 464 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCE
Confidence 9999999999999999999999877999999999985 55566676
No 25
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-59 Score=576.40 Aligned_cols=187 Identities=22% Similarity=0.364 Sum_probs=152.5
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccC---CCCCCC
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQN---DIHSPY 775 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~---~~~~~~ 775 (1245)
+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+ ..+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 355 (510)
T PRK09700 278 KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPN 355 (510)
T ss_pred cccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCC
Confidence 89999999999999999999999999999999998654 489999999876421 234568999998 457788
Q ss_pred CCHHHHHHHHHHhc---CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCe
Q 000872 776 VTVYESLLYSAWLR---LSS--E-VNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSI 848 (1245)
Q Consensus 776 ltv~e~l~~~~~lr---~~~--~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~i 848 (1245)
+||.|++.+....+ ... . ...+..++.++++++.+|+. +..+..+ ..|||||||||+|||+|+.+|++
T Consensus 356 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~l 430 (510)
T PRK09700 356 FSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEV 430 (510)
T ss_pred CcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCE
Confidence 99999998653211 000 0 11223335678999999996 6666654 46999999999999999999999
Q ss_pred eEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 849 IFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 849 l~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 431 LlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~ 478 (510)
T PRK09700 431 IIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDR 478 (510)
T ss_pred EEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCE
Confidence 9999999999999999999999999877999999999985 44556666
No 26
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-59 Score=577.32 Aligned_cols=211 Identities=21% Similarity=0.204 Sum_probs=166.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-++++|+++.+...... .......+.+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 313 ~L~~~~l~~~y~~~~~~--~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i 388 (623)
T PRK10261 313 ILQVRNLVTRFPLRSGL--LNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRI 388 (623)
T ss_pred eEEEeeeEEEEcCCCcc--ccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEEC
Confidence 47888998876421000 00000124699999999999999999999999999999999998654 489999999876
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000872 755 NQE------TFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGV 825 (1245)
Q Consensus 755 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 825 (1245)
... .+++.++|++|+. .+++.+||.|++.+....+. ....++.++++.++++.+||. +..+..+
T Consensus 389 ~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~----- 461 (623)
T PRK10261 389 DTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP----- 461 (623)
T ss_pred CcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----
Confidence 421 2356799999986 47888999999987644321 112344556789999999996 4555543
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.|||||||||+|||+|+.+|++|+|||||+|||..++..+++.|++++++ |.|||+++|+++ .+.+..|+
T Consensus 462 ~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dr 533 (623)
T PRK10261 462 HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHR 533 (623)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 479999999999999999999999999999999999999999999998765 899999999986 44566676
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3e-59 Score=570.90 Aligned_cols=187 Identities=20% Similarity=0.249 Sum_probs=150.9
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCC---CCCCC
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQND---IHSPY 775 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 775 (1245)
+|+|+|+.+++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+. .+++.
T Consensus 278 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~ 355 (510)
T PRK15439 278 GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLD 355 (510)
T ss_pred CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCC
Confidence 59999999999999999999999999999999997654 379999999876431 1235689999974 47788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000872 776 VTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 854 (1245)
Q Consensus 776 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEp 854 (1245)
+|+.|++......+..........++.++++++.+|+. +..+..+ +.||||||||++||++|+.+|++|+||||
T Consensus 356 ~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEP 430 (510)
T PRK15439 356 APLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEP 430 (510)
T ss_pred CcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCC
Confidence 99999986421111111011222345688999999996 5666554 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 855 TSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 855 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+|||+.+...+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 431 t~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~ 472 (510)
T PRK15439 431 TRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADR 472 (510)
T ss_pred CcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 9999999999999999999878999999999986 55566676
No 28
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.6e-58 Score=567.67 Aligned_cols=202 Identities=20% Similarity=0.312 Sum_probs=159.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEEC-Cee-
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITIS-GYP- 753 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~-g~~- 753 (1245)
++++|+++.+... ..+.+.+|+|+|+.|++||++||+||||||||||+++|+|..++ .+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCcc
Confidence 6677777765310 01124699999999999999999999999999999999998653 48999996 532
Q ss_pred --CCc------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccc
Q 000872 754 --KNQ------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-----LRQALV 820 (1245)
Q Consensus 754 --~~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~ 820 (1245)
... ...++.++|++|+..+++.+||.|++.+...+. ...++.+++++++++.+|+.+ ..+..
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988888999999998754321 123334456889999999975 23443
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 821 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 821 g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+..|+
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~ 497 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDR 497 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCE
Confidence 3479999999999999999999999999999999999999999999998764 899999999986 45566676
No 29
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.3e-58 Score=569.03 Aligned_cols=187 Identities=26% Similarity=0.309 Sum_probs=153.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc------cccceEEEEccCC--CC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE------TFTRISGYCEQND--IH 772 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~--~~ 772 (1245)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.++|++|+. .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999763 389999999875421 1245689999986 47
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 773 SPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 773 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
++.+||.|++.+....+.. .....+.+++++++++.+|+. +..+..+ ..|||||||||+||++|+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 7889999999886543211 122334456788999999997 3555543 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+|||+.++..+.+.|++++++ |+|||+++|++. .+.+..|+
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~ 495 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQ 495 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCe
Confidence 9999999999999999999999765 899999999985 34455666
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-58 Score=566.82 Aligned_cols=190 Identities=18% Similarity=0.318 Sum_probs=154.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc----ccccceEEEEccCC---CCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ----ETFTRISGYCEQND---IHS 773 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~ 773 (1245)
+.+|+|+|+++++||++||+|||||||||||++|+|..++ +.+|+|.++|.++.. ...++.++|++|+. .++
T Consensus 273 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~ 351 (500)
T TIGR02633 273 RKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIV 351 (500)
T ss_pred ccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcC
Confidence 3589999999999999999999999999999999998652 137999999987642 12345689999995 478
Q ss_pred CCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000872 774 PYVTVYESLLYSAWLRLS--SEVNSKTREMFVEEVMELVELNP-LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 850 (1245)
Q Consensus 774 ~~ltv~e~l~~~~~lr~~--~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~ 850 (1245)
+.+||+|++.+...-... ........++.++++++.+++.+ ..+..+ +.||||||||++||++|+.+|++|+
T Consensus 352 ~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lll 426 (500)
T TIGR02633 352 PILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLI 426 (500)
T ss_pred CCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 889999999875321110 01122334466889999999964 455544 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 851 MDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 851 lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+|||+.++..+++.|++++++|+|||+++|++. .+-+..|+
T Consensus 427 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~ 472 (500)
T TIGR02633 427 LDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDR 472 (500)
T ss_pred EcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999888999999999985 45556676
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-58 Score=562.97 Aligned_cols=188 Identities=21% Similarity=0.355 Sum_probs=152.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc----ccccceEEEEccCC---CCCC
Q 000872 702 VLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ----ETFTRISGYCEQND---IHSP 774 (1245)
Q Consensus 702 ~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~----~~~~~~~~~v~q~~---~~~~ 774 (1245)
.+++|+|+.|++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+. .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRR--TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcC--CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 389999999999999999999999999999999998653 48999999987542 12345689999985 4788
Q ss_pred CCCHHHHHHHHHHhcC-CCC--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000872 775 YVTVYESLLYSAWLRL-SSE--VNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 850 (1245)
Q Consensus 775 ~ltv~e~l~~~~~lr~-~~~--~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~ 850 (1245)
.+|+.|++.+...... +.. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|+
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEE
Confidence 8999999976432111 000 01223345678999999994 5666654 3699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 851 MDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 851 lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+|||..+...+++.|++++++|.|||+++|++. .+.+..|+
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~ 465 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADR 465 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCE
Confidence 99999999999999999999999888999999999985 44455666
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-57 Score=555.25 Aligned_cols=189 Identities=21% Similarity=0.343 Sum_probs=154.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHh-cc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV----PQRTAAYISQHDIHIGEMTVRETLAFSAR-CQ 75 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~-~~ 75 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++.. ..
T Consensus 26 ~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~ 102 (491)
T PRK10982 26 IHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTK 102 (491)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccCCCHHHHhhccccccc
Confidence 47999999999999999999999887 999999998875432 13569999999988999999999987531 00
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
+. .. ... +..+.++++++.+||.+..+..++ .|||||||||+|
T Consensus 103 ~~--~~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qrv~l 145 (491)
T PRK10982 103 GM--FV------DQD------------------------KMYRDTKAIFDELDIDIDPRAKVA-----TLSVSQMQMIEI 145 (491)
T ss_pred cc--cc------CHH------------------------HHHHHHHHHHHHcCCCCCccCchh-----hCCHHHHHHHHH
Confidence 00 00 000 011235678889999877766554 599999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
||||+.+|++|||||||+|||+.++.++.+.|+++++ .+.++++++|+.+++..+||++++|++|+++..|+++
T Consensus 146 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (491)
T PRK10982 146 AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE--RGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLA 219 (491)
T ss_pred HHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChh
Confidence 9999999999999999999999999999999999865 3567888999999999999999999999999887643
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.1e-56 Score=547.92 Aligned_cols=194 Identities=20% Similarity=0.336 Sum_probs=151.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+.+++||++||+||||||||||+++|+|..++ ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 478888887652 23599999999999999999999999999999999996432 1379999999764
Q ss_pred Cc----ccccceEEEEccCCCCCC--CCCHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000872 755 NQ----ETFTRISGYCEQNDIHSP--YVTVYESLLYSAWL--RLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGV 825 (1245)
Q Consensus 755 ~~----~~~~~~~~~v~q~~~~~~--~ltv~e~l~~~~~l--r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 825 (1245)
.. ...++.++|++|++.+.. ..|++|.+.+...- ...... ..+.++.++++++.+|+.+ ..+..+
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~----- 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAV-SDRQQKLAQQWLDILGIDKRTADAPF----- 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCC-CHHHHHHHHHHHHHcCCchhhccCch-----
Confidence 32 123466899999876543 35777766543211 111111 1223456889999999986 666554
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCC
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTG-RTVVCTIHQPS 888 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~p~ 888 (1245)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++| .|||+++|++.
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~ 463 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE 463 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh
Confidence 4699999999999999999999999999999999999999999999998766 47999999985
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.8e-54 Score=465.78 Aligned_cols=430 Identities=26% Similarity=0.328 Sum_probs=325.3
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCC--CCceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDS--SLKASGKVTYNGHDMHEFVP-------QRTAAYISQHD--IHIGEMTVRETLAF 70 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~--~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~--~~~~~~Tv~e~l~f 70 (1245)
+||+|+||||||-..+.++|+++. ....+|+|.++|+++-.... ...|++++|+| .+-|-.|+...+.-
T Consensus 39 lAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E 118 (534)
T COG4172 39 LALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAE 118 (534)
T ss_pred EEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHH
Confidence 689999999999999999999974 23468999999998743322 14699999997 45666788777776
Q ss_pred HHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccc
Q 000872 71 SARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1245)
..+++... ...+++.++-++++..|+++..... +.....||||||
T Consensus 119 ~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p~~rl--~~yPHeLSGGqR 163 (534)
T COG4172 119 VLRLHRGL---------------------------------SRAAARARALELLELVGIPEPEKRL--DAYPHELSGGQR 163 (534)
T ss_pred HHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCchhhhh--hhCCcccCcchh
Confidence 55543210 1122344566788889998754332 356678999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
|||.||+||+.+|++||-||||++||.....+|+++|+++..+. +..++.|||+..-+..++|||+||.+|++++.|+.
T Consensus 164 QRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t 242 (534)
T COG4172 164 QRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKFADRVYVMQHGEIVETGTT 242 (534)
T ss_pred hHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcH
Confidence 99999999999999999999999999999999999999998764 77888899999999999999999999999999987
Q ss_pred hhHHHHHHhCCCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCC
Q 000872 231 EHVEQFFISMGFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHP 310 (1245)
Q Consensus 231 ~~~~~~f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1245)
+++-. .|.|......+..
T Consensus 243 ~~lF~--------~PqHpYTr~Ll~a------------------------------------------------------ 260 (534)
T COG4172 243 ETLFA--------APQHPYTRKLLAA------------------------------------------------------ 260 (534)
T ss_pred HHHhh--------CCCChHHHHHHhc------------------------------------------------------
Confidence 65521 1111100000000
Q ss_pred cccccCCCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHH
Q 000872 311 AALTTRKYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTIT 390 (1245)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~ 390 (1245)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhHHHHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHH
Q 000872 391 FNGMAEISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQM 470 (1245)
Q Consensus 391 ~~~~~~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~ 470 (1245)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcccccCCCCC
Q 000872 471 SSAMFRLIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKILPNKT 550 (1245)
Q Consensus 471 ~~~~~~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~~~~~~ 550 (1245)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchHHHhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccCCCccccccccCC
Q 000872 551 KPLGIEVLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLNPFGTSKAFISEESQSTEHDSRTGGTVQLSTCANS 630 (1245)
Q Consensus 551 ~~~g~~~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1245)
++.|
T Consensus 261 eP~g---------------------------------------------------------------------------- 264 (534)
T COG4172 261 EPSG---------------------------------------------------------------------------- 264 (534)
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 0000
Q ss_pred CCccccccchhhhhhccCCCCcccccccCCCccCCCCccCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEE
Q 000872 631 SSHITRSESRDYVRRRNSSSQSRETTIETDQPKNRGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGA 710 (1245)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~ 710 (1245)
.. ...+ +..+.-++.+|++..++.+..+-++ ......++++||++
T Consensus 265 -------------------------~~-~p~~-------~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~ 309 (534)
T COG4172 265 -------------------------DP-PPLP-------EDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLT 309 (534)
T ss_pred -------------------------CC-CCCC-------CCCCceEEecceEEEEecCCccccc--cchheEEeccceeE
Confidence 00 0000 0011234455555544433221111 11234689999999
Q ss_pred EeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc------ccccceEEEEccCCC--CCCCCCHHHHH
Q 000872 711 FRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ------ETFTRISGYCEQNDI--HSPYVTVYESL 782 (1245)
Q Consensus 711 i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~--~~~~ltv~e~l 782 (1245)
.++||.+||+|.||||||||-.+|.+...+ +|+|.++|.+++. ..+|+..-.|+||+. +.|.+||.|-+
T Consensus 310 L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII 386 (534)
T COG4172 310 LRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQII 386 (534)
T ss_pred ecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHh
Confidence 999999999999999999999999987653 5999999998753 235677888999975 67889999988
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHH
Q 000872 783 LYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 862 (1245)
Q Consensus 783 ~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~ 862 (1245)
.-+.....+ ..+..+++++|.++++++||....- +.....+|||||||++||||++.+|++++||||||.||-.-
T Consensus 387 ~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r----~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SV 461 (534)
T COG4172 387 EEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATR----NRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSV 461 (534)
T ss_pred hhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHh----hcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHH
Confidence 766555543 4678899999999999999986432 12246799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-CCCEEEEEecCCC
Q 000872 863 AAVVMRTVRNTVD-TGRTVVCTIHQPS 888 (1245)
Q Consensus 863 ~~~i~~~l~~~~~-~g~tvi~~~H~p~ 888 (1245)
+.+|++.||++.+ .|-+-++++||..
T Consensus 462 QaQvv~LLr~LQ~k~~LsYLFISHDL~ 488 (534)
T COG4172 462 QAQVLDLLRDLQQKHGLSYLFISHDLA 488 (534)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeccHH
Confidence 9999999999864 4899999999975
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-53 Score=526.31 Aligned_cols=186 Identities=22% Similarity=0.302 Sum_probs=149.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. ++.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 478889887652 23699999999999999999999999999999999998654 4899999542
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000872 755 NQETFTRISGYCEQND-IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGe 832 (1245)
..+||++|+. .+++.+||+|++.+....+. .... +..++++++.+|+.+ ..+..+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 67788999999987643221 1111 123457899999964 345443 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. .|||+++|++. .+.+..|+
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~tvi~vtHd~~-~~~~~~d~ 511 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP---GCAVVISHDRW-FLDRIATH 511 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC---CeEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999872 48999999975 44445565
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-53 Score=523.12 Aligned_cols=183 Identities=20% Similarity=0.264 Sum_probs=148.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 588899987753 23599999999999999999999999999999999997654 4799999873
Q ss_pred CcccccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHH
Q 000872 755 NQETFTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgG 831 (1245)
+.+||++|+.. +.+.+|++|++.+.. .. ...++.++++++.+|+. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-----~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-----GDDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-----CccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 45899999864 456789999986421 11 11234578899999994 5555543 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||+++|++. .+-+..|+
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~ 504 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATR 504 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999876 459999999985 44444565
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-52 Score=518.10 Aligned_cols=186 Identities=20% Similarity=0.294 Sum_probs=148.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+.|++||++||+||||||||||+++|+|...+ .+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECCc--
Confidence 478888887652 23699999999999999999999999999999999998654 4899999542
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000872 755 NQETFTRISGYCEQND-IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGe 832 (1245)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+|+.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47788999999987642211 1111 223567899999964 345443 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. .|||+++|++. .+-...|+
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~ 509 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATH 509 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999872 48999999975 34445565
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.3e-53 Score=517.72 Aligned_cols=183 Identities=22% Similarity=0.247 Sum_probs=151.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. + ..|+++|+.+++||++||+||||||||||+++|+|..++ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 477888876542 1 248999999999999999999999999999999998654 48999886
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
..++|++|+..+.+.+||+|++.+.... .. ....++++++.+++.+..+..+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~---~~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LG---SSYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cC---hHHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888889999999864211 11 1224688999999987777654 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. .+....|+
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDr 523 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDR 523 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999764 899999999975 33445566
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-51 Score=508.35 Aligned_cols=182 Identities=20% Similarity=0.318 Sum_probs=145.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. ++.+|+|+|+.|++||++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 478889887652 24699999999999999999999999999999999998654 4899999741
Q ss_pred CcccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHH
Q 000872 755 NQETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgG 831 (1245)
..+||++|+. .+.+..|+.+++.- . . ....++.+.++++.+++.. ..+..+ +.||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~----~~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--A----PQELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--C----chhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 1 1122355788999999963 455544 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+||++|+.+|++|+|||||+|||..+...+.+.|+++ +.|||+++|++. .+....|+
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~ 496 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDD 496 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999987 349999999975 34455565
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=9.3e-51 Score=507.30 Aligned_cols=186 Identities=24% Similarity=0.314 Sum_probs=147.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-+.++|+++.+. ++.+|+|+|+.|++||++||+|||||||||||++|+|...+ .+|+|.+ |.+
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~- 381 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTK- 381 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCC-
Confidence 478899887652 24699999999999999999999999999999999998653 4899998 432
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHH
Q 000872 755 NQETFTRISGYCEQND-IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSgGe 832 (1245)
-.+||++|+. .+.+.+||.|++.+..... ... .....+.++++.+++. +..+..+ +.|||||
T Consensus 382 ------~~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 382 ------LEVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred ------cEEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 1489999975 5778899999998653210 011 1234577888889885 3455544 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+||++|+.+|++|+|||||+|||..+...+.+.|++. +.|||+++|++. .+-...|+
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~ 506 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTE 506 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999876 459999999964 33344454
No 41
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.4e-51 Score=485.80 Aligned_cols=202 Identities=25% Similarity=0.314 Sum_probs=157.0
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCcc
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSRY 81 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~~ 81 (1245)
++|||+||||||||||+|+|...|+ +|+|...+. -.++|++|++...+..||.|.+.-+..- .+
T Consensus 32 iGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~~~v~~~~~~-----~~ 95 (530)
T COG0488 32 IGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVLDYVIEGFGE-----LR 95 (530)
T ss_pred EEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHHHHHHhhhHH-----HH
Confidence 6899999999999999999999988 999987752 2599999999999999999999865421 11
Q ss_pred chhhhhhHHHHhhhcCCCch---hHHHH-HHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 82 DMLVELSRREKAAKIIPDAD---IDVFM-KAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
+... +.+......++.+ +.++. ......+++.+.+++.++..||+++. ++.++ +||||||.||+||+
T Consensus 96 ~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-----~LSGG~r~Rv~LA~ 166 (530)
T COG0488 96 ELLA---ELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-----SLSGGWRRRVALAR 166 (530)
T ss_pred HHHH---HHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh-----hcCHHHHHHHHHHH
Confidence 1111 1111111111111 11111 11223446777889999999999987 76666 49999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEE-EecChhhH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIV-YQGPLEHV 233 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv-~~G~~~~~ 233 (1245)
||+.+|++|+||||||+||..+..++.+.|+++ .+ ++++|+|++..+.++|++|+-++.|++. |.|.++..
T Consensus 167 aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~~~ 238 (530)
T COG0488 167 ALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYSSY 238 (530)
T ss_pred HHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCHHHH
Confidence 999999999999999999999999999999864 35 7788999999999999999999999885 77876654
No 42
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-50 Score=466.72 Aligned_cols=421 Identities=22% Similarity=0.336 Sum_probs=321.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCccc----ceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQ----RTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++++|.||||||||+|+|+|.++|+ +|+|.++|++....+++ .-|+.|+|+..+.|++||.|||.++.....
T Consensus 36 V~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~ 112 (500)
T COG1129 36 VHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTR 112 (500)
T ss_pred EEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccCCccHHHHhhccccccc
Confidence 47999999999999999999999998 99999999988765543 468999999999999999999987654321
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
..... .+ ...++.+.++++.+|+....++.|++ ||+||||-|.||
T Consensus 113 ~~g~i------d~------------------------~~m~~~A~~~l~~lg~~~~~~~~v~~-----LsiaqrQ~VeIA 157 (500)
T COG1129 113 RFGLI------DR------------------------KAMRRRARELLARLGLDIDPDTLVGD-----LSIAQRQMVEIA 157 (500)
T ss_pred CCCcc------CH------------------------HHHHHHHHHHHHHcCCCCChhhhhhh-----CCHHHHHHHHHH
Confidence 00000 00 11123456789999997558888875 999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh-hhHHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL-EHVEQ 235 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~-~~~~~ 235 (1245)
||+..+++|+|||||||+|+......+++.+++++. +|..++.|+|..+|+++.||||.||.||+.+..++. .+..
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~- 234 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETS- 234 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCC-
Confidence 999999999999999999999999999999999975 588889999999999999999999999999876652 2110
Q ss_pred HHHhCCCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCCccccc
Q 000872 236 FFISMGFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHPAALTT 315 (1245)
Q Consensus 236 ~f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1245)
.++..
T Consensus 235 -------------------------------------------~~~lv-------------------------------- 239 (500)
T COG1129 235 -------------------------------------------EDELV-------------------------------- 239 (500)
T ss_pred -------------------------------------------HHHHH--------------------------------
Confidence 00000
Q ss_pred CCCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHHhhHH
Q 000872 316 RKYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITFNGMA 395 (1245)
Q Consensus 316 ~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~ 395 (1245)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHHHHHHH
Q 000872 396 EISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQMSSAMF 475 (1245)
Q Consensus 396 ~~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~~~~~~ 475 (1245)
-.|+|=
T Consensus 240 -------------------------------------------------~~MvGr------------------------- 245 (500)
T COG1129 240 -------------------------------------------------RLMVGR------------------------- 245 (500)
T ss_pred -------------------------------------------------HHhhCc-------------------------
Confidence 000000
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcccccCCCCCCcchH
Q 000872 476 RLIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKILPNKTKPLGI 555 (1245)
Q Consensus 476 ~~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~~~~~~~~~g~ 555 (1245)
.....
T Consensus 246 -----------------------------------------------------------------~~~~~---------- 250 (500)
T COG1129 246 -----------------------------------------------------------------ELEDL---------- 250 (500)
T ss_pred -----------------------------------------------------------------chhhh----------
Confidence 00000
Q ss_pred HHhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccCCCccccccccCCCCccc
Q 000872 556 EVLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLNPFGTSKAFISEESQSTEHDSRTGGTVQLSTCANSSSHIT 635 (1245)
Q Consensus 556 ~~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1245)
.+
T Consensus 251 ------------------------------------------------------------------------------~~ 252 (500)
T COG1129 251 ------------------------------------------------------------------------------FP 252 (500)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccchhhhhhccCCCCcccccccCCCccCCCCccCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCe
Q 000872 636 RSESRDYVRRRNSSSQSRETTIETDQPKNRGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGV 715 (1245)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge 715 (1245)
. .. .. ...+..+++++++. ...++|+||++++||
T Consensus 253 ------------~-~~----------~~------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GE 286 (500)
T COG1129 253 ------------E-PP----------EE------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGE 286 (500)
T ss_pred ------------c-cc----------cc------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCc
Confidence 0 00 00 00011344444431 115789999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHHh
Q 000872 716 LTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQND---IHSPYVTVYESLLYSAWL 788 (1245)
Q Consensus 716 ~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ltv~e~l~~~~~l 788 (1245)
++||-|-=|||+|-|+++|.|..+. .+|+|.+||++.... ..+.-++|||.|- -+++.++|.||+.++...
T Consensus 287 IlGiaGLvGaGRTEl~~~lfG~~~~--~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~ 364 (500)
T COG1129 287 ILGIAGLVGAGRTELARALFGARPA--SSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLR 364 (500)
T ss_pred EEEEeccccCCHHHHHHHHhCCCcC--CCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhh
Confidence 9999999999999999999995443 489999999986532 3445689999874 467889999999887332
Q ss_pred cCCC--CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHH
Q 000872 789 RLSS--EVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVV 866 (1245)
Q Consensus 789 r~~~--~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i 866 (1245)
+... -.+....++.+++..+.|++....- +..+..||||.+|+|.|||.|..+|+||+|||||.|+|..+..+|
T Consensus 365 ~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~----~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eI 440 (500)
T COG1129 365 RFSRRGLIDRRKERALAERYIRRLRIKTPSP----EQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEI 440 (500)
T ss_pred hhccccccChHHHHHHHHHHHHhcCcccCCc----cchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHH
Confidence 3221 2344555567888889998864321 122457999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 867 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 867 ~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.+++++++|++||+++-... |+..+.|+
T Consensus 441 y~li~~lA~~G~ail~iSSElp-Ell~~~DR 470 (500)
T COG1129 441 YRLIRELAAEGKAILMISSELP-ELLGLSDR 470 (500)
T ss_pred HHHHHHHHHCCCEEEEEeCChH-HHHhhCCE
Confidence 9999999999999999998753 88888888
No 43
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.3e-48 Score=433.69 Aligned_cols=425 Identities=21% Similarity=0.324 Sum_probs=326.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCccc----ceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQ----RTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+.||+|+||||||||+++|.|.++|+ +|+|.++|+++.-..++ .-||+|.||..+++++||.|||..+..-..
T Consensus 32 IHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~ 108 (501)
T COG3845 32 IHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSK 108 (501)
T ss_pred EEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeeccccccccchhhhhhhcCcccc
Confidence 46899999999999999999999998 99999999998655543 468999999999999999999998764210
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. .+. + ..++.+.++++.+.+||+-..|.+|++ ||-||||||.|-
T Consensus 109 ~-~~~-------------------~-----------~~~~~~~i~~l~~~yGl~vdp~~~V~d-----LsVG~qQRVEIl 152 (501)
T COG3845 109 G-GLI-------------------D-----------RRQARARIKELSERYGLPVDPDAKVAD-----LSVGEQQRVEIL 152 (501)
T ss_pred c-ccc-------------------C-----------HHHHHHHHHHHHHHhCCCCCccceeec-----CCcchhHHHHHH
Confidence 0 000 0 011234567889999999999988886 999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQF 236 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~ 236 (1245)
++|+.+|++|||||||+-|-|....++++.|+++++ .|.+|+.|||...|+.+.|||+.||.+||++-.-++ ..
T Consensus 153 KaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~~-- 226 (501)
T COG3845 153 KALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--VA-- 226 (501)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--CC--
Confidence 999999999999999999999999999999999986 477888899999999999999999999997632210 00
Q ss_pred HHhCCCCCCCCCChhhHHHHhcCccchhhhhhcCCCCCccCCHHHHHHHHHhchhhhhhhhhhCCCCCCCCCCCcccccC
Q 000872 237 FISMGFKCPKRKGIADFLQEVTSRKDQEQYWVRNDEPYRFVTVKEFVHAFQSFHVGRKLGDELGIPFDKKNSHPAALTTR 316 (1245)
Q Consensus 237 f~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1245)
+ .+.+++.+
T Consensus 227 -------------------------~--------------~t~~ela~-------------------------------- 235 (501)
T COG3845 227 -------------------------E--------------TTEEELAE-------------------------------- 235 (501)
T ss_pred -------------------------C--------------CCHHHHHH--------------------------------
Confidence 0 00000000
Q ss_pred CCcccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccchhhHHHHHHHHHHHhhHHH
Q 000872 317 KYGVGKKELLKACFSREHLLMKRNSFVYIFRLTQVMFLAVIGMTIFLRTKMHRDSLTDGVIYTGALFFILTTITFNGMAE 396 (1245)
Q Consensus 317 ~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~li~g~~~~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~ 396 (1245)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhcchhHHHhhhCCCCChhhHHHHHHHHHhhHHHHHHHHHHhhhhhccccccChhHHHHHHHHHHHHHHHHHHHHH
Q 000872 397 ISMTIAKLPVFYKQRDLRFYPSWAYALPAWILKIPISIVEVSVWVFMTYYVIGFDSNAGRFFKQYLLLLIVNQMSSAMFR 476 (1245)
Q Consensus 397 ~~~~~~~~~vf~~er~~~~y~~~~y~la~~~~~lp~~~~~~~i~~~i~y~~~gl~~~~~~f~~~~l~~~~~~~~~~~~~~ 476 (1245)
.|+
T Consensus 236 -------------------------------------------------lMv---------------------------- 238 (501)
T COG3845 236 -------------------------------------------------LMV---------------------------- 238 (501)
T ss_pred -------------------------------------------------Hhc----------------------------
Confidence 000
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHhccccCcCCccccchhhhhhCHHHHHHHHHHHhhcCCCcccccCCCCCCcchHH
Q 000872 477 LIAAVGRSMVVANTFGSLVLLLLFVLGGFVLSRDDIKKWWKWGYWCSPLMYAQNAIVVNEFLGNSWKKILPNKTKPLGIE 556 (1245)
Q Consensus 477 ~i~~~~~~~~~a~~~~~~~~~~~~l~~G~~i~~~~i~~~~~w~~~isp~~y~~~al~~~ef~~~~~~~~~~~~~~~~g~~ 556 (1245)
| ..
T Consensus 239 ---------------------------G-----------------------------------~~--------------- 241 (501)
T COG3845 239 ---------------------------G-----------------------------------RE--------------- 241 (501)
T ss_pred ---------------------------C-----------------------------------Cc---------------
Confidence 0 00
Q ss_pred HhhhcCccccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccCCCccccccccCCCCcccc
Q 000872 557 VLDSRGFFTDAYWYWLGVGALTGFIILFQFGFTLALSFLNPFGTSKAFISEESQSTEHDSRTGGTVQLSTCANSSSHITR 636 (1245)
Q Consensus 557 ~l~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1245)
+..
T Consensus 242 -----------------------------------------------------------------------------v~~ 244 (501)
T COG3845 242 -----------------------------------------------------------------------------VVL 244 (501)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred ccchhhhhhccCCCCcccccccCCCccCCCCccCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeE
Q 000872 637 SESRDYVRRRNSSSQSRETTIETDQPKNRGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVL 716 (1245)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~ 716 (1245)
. . . . .+... ...-++++|++...+. ....+++|||++++||+
T Consensus 245 ~--------~---------~--~-~~~~p------g~~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEI 286 (501)
T COG3845 245 R--------V---------V--K-PPSTP------GEVVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEI 286 (501)
T ss_pred c--------c---------c--c-CCCCC------CCeEEEEeeeEeecCC------------CCceeeeeeeEEecCcE
Confidence 0 0 0 0 00000 0225777887764321 13579999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC----Ccc-cccceEEEEccCCC---CCCCCCHHHHHHHHHHh
Q 000872 717 TALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK----NQE-TFTRISGYCEQNDI---HSPYVTVYESLLYSAWL 788 (1245)
Q Consensus 717 ~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~----~~~-~~~~~~~~v~q~~~---~~~~ltv~e~l~~~~~l 788 (1245)
+||.|-.|.|.+.|+.+|+|..+.. +|+|.++|.++ +.. ..+.-++|||+|-. +.+.+|+.||+.+...-
T Consensus 287 vGIAGV~GNGQ~eL~eaisGlr~~~--~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~ 364 (501)
T COG3845 287 VGIAGVAGNGQSELVEAISGLRKPA--SGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHD 364 (501)
T ss_pred EEEEecCCCCHHHHHHHHhCCCccC--CceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhcc
Confidence 9999999999999999999976432 59999999986 222 23345899999763 45789999999876543
Q ss_pred cCC----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000872 789 RLS----SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 864 (1245)
Q Consensus 789 r~~----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~ 864 (1245)
+.| .-....+.++...+++++++.....-. ...+.||||++||+-+||||.++|++|+..+||.|||..+..
T Consensus 365 ~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~ 440 (501)
T COG3845 365 KKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIE 440 (501)
T ss_pred ccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHH
Confidence 211 123445667788999999988732211 124679999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 865 VVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 865 ~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.|.+.|.+.++.|+.|++++-+.. +++++-|+
T Consensus 441 ~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDr 472 (501)
T COG3845 441 FIHERLLELRDAGKAVLLISEDLD-EILELSDR 472 (501)
T ss_pred HHHHHHHHHHhcCCEEEEEehhHH-HHHHhhhe
Confidence 999999999999999999999875 88999898
No 44
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=7.3e-48 Score=479.22 Aligned_cols=185 Identities=18% Similarity=0.229 Sum_probs=142.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. +++.+|+|+|+.|++||+++|+|||||||||||++|+|..++ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 478899988762 123599999999999999999999999999999999998654 4799998762
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~~~lSgGer 833 (1245)
..+||++|+. ...+++.++.........+ .. .++.++++++.+|+.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~----~~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GV----PEQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CC----CHHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 2345666654322111111 11 1345788999999973 44443 346999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||++||++|+.+|++|+|||||+|||..+...+.+.|++. +.|||+++|++. .+-...|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~dr 693 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDE 693 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999888764 349999999975 33344554
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-42 Score=348.80 Aligned_cols=203 Identities=26% Similarity=0.411 Sum_probs=172.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC----cccceEEEeccccccCCCCCHHHHHHHHHhc-c
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF----VPQRTAAYISQHDIHIGEMTVRETLAFSARC-Q 75 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~-~ 75 (1245)
+++|+|||||||||||++|.|+.+++ +|+|.++|.++... ..++.+|+|+|+..|||.+||.||+..+... +
T Consensus 30 vv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~ 106 (240)
T COG1126 30 VVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVK 106 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHHc
Confidence 47899999999999999999999988 99999999766322 2367899999999999999999999986531 1
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
+ . ...++++.+.++|+.+||.+.+|.+.+ +|||||||||+|
T Consensus 107 ~----------~------------------------~k~eA~~~A~~lL~~VGL~~ka~~yP~-----qLSGGQqQRVAI 147 (240)
T COG1126 107 K----------L------------------------SKAEAREKALELLEKVGLADKADAYPA-----QLSGGQQQRVAI 147 (240)
T ss_pred C----------C------------------------CHHHHHHHHHHHHHHcCchhhhhhCcc-----ccCcHHHHHHHH
Confidence 1 0 112234556779999999999987765 599999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||||+.+|+++++|||||+|||....++++.++++++ .|.|++++||....+.+.+|||+.|++|+++++|+++++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~-- 223 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF-- 223 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH--
Confidence 9999999999999999999999999999999999987 478888899999999999999999999999999998876
Q ss_pred HHHhCCCCCCCCCChhhHHH
Q 000872 236 FFISMGFKCPKRKGIADFLQ 255 (1245)
Q Consensus 236 ~f~~~G~~~~~~~~~~~~~~ 255 (1245)
|..|++.-..+|+.
T Consensus 224 ------f~~p~~~R~~~FL~ 237 (240)
T COG1126 224 ------FDNPKSERTRQFLS 237 (240)
T ss_pred ------hcCCCCHHHHHHHH
Confidence 34555544555554
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-41 Score=338.01 Aligned_cols=191 Identities=26% Similarity=0.367 Sum_probs=168.2
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|++.++ +...+|+|||++|++||+++|+|||||||||||+||.+...+ .+|+|.+||.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~--~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEP--DSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCC--CCceEEECCEecc
Confidence 5566666544 456799999999999999999999999999999999997654 4899999997653
Q ss_pred ----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 756 ----QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 756 ----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
-...|+.+|+|+|+-.+||.+||.||+..+...- ...++++.++...++|+.+||.+.+|... ..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2356788999999999999999999999875332 24567778888999999999999999874 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
|||||+|||||+-+|+++++|||||.|||+...++.+.+++++++|.|.||+||...
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~ 197 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMG 197 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhH
Confidence 999999999999999999999999999999999999999999999999999999765
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.1e-40 Score=368.28 Aligned_cols=176 Identities=18% Similarity=0.232 Sum_probs=134.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.++. +..++++++|-|.+++.+|++||||+||||||+++.|...+ ..|.|.-.-+.
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc-
Confidence 5778888876642 22689999999999999999999999999999999997654 36665443221
Q ss_pred CcccccceEEEEccC--CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQETFTRISGYCEQN--DIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~--~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
..++..|. +.+.-..++-|+++-.. ..+.+.+.+..++...||..-.+.. ..+.||+||
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~~--------~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~Gq 514 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPKF--------PDEKELEEMRSILGRFGLTGDAQVV----PMSQLSDGQ 514 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHhc--------cccchHHHHHHHHHHhCCCcccccc----chhhccccc
Confidence 22333443 23334567777764221 1133455688899999999554433 246799999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQP 887 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p 887 (1245)
|+||..|+.++..|.+|+|||||+|||..+...+.+.|.+. ..+||+++|+-
T Consensus 515 r~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDf 566 (614)
T KOG0927|consen 515 RRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDF 566 (614)
T ss_pred chhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechh
Confidence 99999999999999999999999999999999999999765 46899999974
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=349.09 Aligned_cols=207 Identities=27% Similarity=0.398 Sum_probs=178.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+.+|+|+||||||||++++.++..|+ +|+|.++|.++.... .++.||+++|+..++.+.||.||+.|..++
T Consensus 34 I~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLei 110 (339)
T COG1135 34 IFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLEL 110 (339)
T ss_pred EEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhh
Confidence 47999999999999999999999998 999999998876554 257899999999999999999999998876
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+.+ + .+.+.++.++++.+||++.++.+.. +|||||||||+
T Consensus 111 ag~~----------k------------------------~ei~~RV~elLelVgL~dk~~~yP~-----qLSGGQKQRVa 151 (339)
T COG1135 111 AGVP----------K------------------------AEIKQRVAELLELVGLSDKADRYPA-----QLSGGQKQRVA 151 (339)
T ss_pred cCCC----------H------------------------HHHHHHHHHHHHHcCChhhhccCch-----hcCcchhhHHH
Confidence 5421 1 1234567789999999999986654 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+.+|+||++|||||+|||.+...|++.|+++.+.. +.||++|+|.++.+.+.||||.||++|++++.|+..++
T Consensus 152 IARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v- 229 (339)
T COG1135 152 IARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV- 229 (339)
T ss_pred HHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh-
Confidence 9999999999999999999999999999999999998764 77888899999999999999999999999999998887
Q ss_pred HHHHhCCCCCCCCCChhhHHHHhc
Q 000872 235 QFFISMGFKCPKRKGIADFLQEVT 258 (1245)
Q Consensus 235 ~~f~~~G~~~~~~~~~~~~~~~~~ 258 (1245)
|..|++.-..+|+.+..
T Consensus 230 -------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 230 -------FANPKHAITQEFIGETL 246 (339)
T ss_pred -------hcCcchHHHHHHHHhhc
Confidence 34555555555555443
No 49
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-39 Score=341.38 Aligned_cols=202 Identities=27% Similarity=0.424 Sum_probs=171.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++. + ++|+|||+++++|++++|+||||||||||++++.|..++ .+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p--~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKP--SSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CcceEEEccccc
Confidence 5788999988741 2 599999999999999999999999999999999997664 489999999876
Q ss_pred CcccccceEEEEccCCCC--CCCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQETFTRISGYCEQNDIH--SPYVTVYESLLYSAWLRLS--SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~--~~~ltv~e~l~~~~~lr~~--~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
....-+..+|||||.... ..-+||+|-+..+..-+.. ...+ ++.++.++++|+.+|+.+.+|..+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654445789999995422 2237999999876433321 1223 3336779999999999999998876 5999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
||+||+.|||||+++|++|+|||||+|+|+.++..+.+.|++++++|+||++++|+++ .+.+.||+.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~v 209 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRV 209 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEE
Confidence 9999999999999999999999999999999999999999999988999999999997 677889983
No 50
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.7e-39 Score=335.79 Aligned_cols=186 Identities=28% Similarity=0.414 Sum_probs=159.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc------c-cccceEEEEccCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ------E-TFTRISGYCEQNDIHS 773 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~------~-~~~~~~~~v~q~~~~~ 773 (1245)
..+|+++|+.|++||++||||||||||||||++|.|...+ .+|.|.++|.+... . .+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999997665 58999999987642 1 2345699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEe
Q 000872 774 PYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQ-ALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 852 (1245)
Q Consensus 774 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lD 852 (1245)
|.+||+||+.+...+... ...++++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|++++.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987665532 22256677899999999997655 43 3479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhc
Q 000872 853 EPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 853 EpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
|||..||+.++..|++.++++.++ |+|||++||+|. +-+..|+.
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~--lA~~~dr~ 212 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPE--LAKYADRV 212 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHH--HHHhCCEE
Confidence 999999999999999999999765 899999999985 44677763
No 51
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-39 Score=335.75 Aligned_cols=197 Identities=25% Similarity=0.386 Sum_probs=171.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++++++.+. ...+|+|+|++|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 356777776653 25799999999999999999999999999999999998764 489999999887
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
. .-...++||+|++.++|-+||+||+.++...+. .+++++++++++.++.+||.+..|... +.|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 3 234678999999999999999999999887663 456667778999999999999998764 579999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+|||||+.+|+||+||||.++||+.|+..+++.|.++.+ .++||+++||+....++ +=|+
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~-LsdR 200 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVY-LADR 200 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHh-hhCE
Confidence 99999999999999999999999999999999999999864 48999999999875544 4565
No 52
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-38 Score=357.63 Aligned_cols=187 Identities=33% Similarity=0.471 Sum_probs=168.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCC
Q 000872 700 KLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVT 777 (1245)
Q Consensus 700 ~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 777 (1245)
++.+|+||||+|++||++|++||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 46799999999999999999999999999999999998765 58999999988754 456788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000872 778 VYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 857 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsg 857 (1245)
|+|+|.|.+.++.+.. ...+++++++++.+||.+.++.. +++||+|||||++||+||+++|++|||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999999986543 45567899999999999855444 457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHHhhh
Q 000872 858 LDARAAAVVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 858 LD~~~~~~i~~~l~~~~~~g-~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+.++..+.+.|++++++| +||++++|+++ ++.+.+|+
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~ 206 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDR 206 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCE
Confidence 99999999999999999887 79999999997 66677887
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-39 Score=329.48 Aligned_cols=194 Identities=25% Similarity=0.400 Sum_probs=168.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.. .++.||||-|+..+||++||.|||.+-..+.+-
T Consensus 29 f~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w 105 (309)
T COG1125 29 FLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGW 105 (309)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCC
Confidence 36899999999999999999999998 999999999987654 468899999999999999999999986655431
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
. + ++.+.+++++++.+||+.. ...++.++.|||||+|||.+||
T Consensus 106 ~----------k------------------------~~i~~r~~ELl~lvgL~p~---~~~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 106 D----------K------------------------ERIKKRADELLDLVGLDPS---EYADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred C----------H------------------------HHHHHHHHHHHHHhCCCHH---HHhhcCchhcCcchhhHHHHHH
Confidence 0 0 1234467889999999752 1124666789999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||+.+|+|+++|||+++|||.++..+.+-++++.+.. ++||+.+||+.+|+.+++|||++|++|+++..++++++..
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 9999999999999999999999999999999998765 5677889999999999999999999999999999999854
No 54
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-39 Score=338.93 Aligned_cols=192 Identities=28% Similarity=0.461 Sum_probs=165.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCc---cCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGH---DMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
++|++|||||||||||++|+|+..|+ +|.|.+||+ +.+.... .|+||||+|+..+|+.|||.|||.|+.+.+.
T Consensus 30 ~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~ 106 (345)
T COG1118 30 LVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRK 106 (345)
T ss_pred EEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccc
Confidence 47999999999999999999999998 999999999 6555333 4789999999999999999999999987641
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. + +. ..+.+..++++|+...|++.++ +.+.+|||||||||++|
T Consensus 107 ~--~---p~---------------------------~~~~r~rv~elL~lvqL~~la~-----ryP~QLSGGQrQRVALA 149 (345)
T COG1118 107 E--R---PS---------------------------EAEIRARVEELLRLVQLEGLAD-----RYPAQLSGGQRQRVALA 149 (345)
T ss_pred c--C---CC---------------------------hhhHHHHHHHHHHHhcccchhh-----cCchhcChHHHHHHHHH
Confidence 0 0 00 0112345677888888887665 55567999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||+..|++|+||||+++||++.+..+.++|+++.+.. +.+.+.+||+.+|++++||||++|++|+|...|+++++
T Consensus 150 RALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 150 RALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 99999999999999999999999999999999997754 45556699999999999999999999999999999988
No 55
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-38 Score=335.01 Aligned_cols=195 Identities=23% Similarity=0.332 Sum_probs=169.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+++++++..+... ......+|+|||++|++||++||+|+||||||||++++.+...+ .+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 4667776544321 11235699999999999999999999999999999999997654 4899999997754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 Q------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
. ...|+.+|+++|+..++...||.||+.|...+.. .++++++++|.++++.+||.+.++... .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 3 3467889999999999999999999999887763 678899999999999999999888764 4799
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCC
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPS 888 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~ 888 (1245)
|||||||+|||||+.+|+||++|||||+|||+|...|.+.|+++.++ |.||++++|++.
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~ 203 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME 203 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH
Confidence 99999999999999999999999999999999999999999998654 999999999873
No 56
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=354.24 Aligned_cols=190 Identities=29% Similarity=0.448 Sum_probs=170.5
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
++|+|||||||||||++|+|+.+|+ +|+|.++|+++++..+ +|.+|+|+|+..++|.|||+||+.|+.+.++...
T Consensus 32 ~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k- 107 (338)
T COG3839 32 VVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPK- 107 (338)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCch-
Confidence 6899999999999999999999988 9999999999998766 4789999999999999999999999988754210
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
.+.+++++++.+.|+|++..|.++. +|||||||||+|||||+
T Consensus 108 ---------------------------------~ei~~rV~eva~~L~l~~lL~r~P~-----~LSGGQrQRVAlaRAlV 149 (338)
T COG3839 108 ---------------------------------AEIDKRVKEVAKLLGLEHLLNRKPL-----QLSGGQRQRVALARALV 149 (338)
T ss_pred ---------------------------------HHHHHHHHHHHHHcCChhHHhcCcc-----cCChhhHHHHHHHHHHh
Confidence 1234567889999999999886654 69999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
.+|++++||||+|.||++.+..+...++++.+.. ++|++.+||+..|+..++|||++|++|++...|++.++-
T Consensus 150 r~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely 222 (338)
T COG3839 150 RKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELY 222 (338)
T ss_pred cCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHh
Confidence 9999999999999999999999999999987654 567778999999999999999999999999999999883
No 57
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=331.31 Aligned_cols=177 Identities=25% Similarity=0.372 Sum_probs=155.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+||||||||||||+|+|+.+|+ +|+|.++|.++ ..+...++||+|++.++|.+||+||+.|+....+...
T Consensus 31 fvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~- 104 (248)
T COG1116 31 FVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKSK- 104 (248)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHHhhheehhhccccch-
Confidence 47999999999999999999999988 99999999987 3355679999999999999999999999887643110
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
.+.+.++++.++..||.+..|... ++|||||||||+|||||+
T Consensus 105 ---------------------------------~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 105 ---------------------------------AEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQRVAIARALA 146 (248)
T ss_pred ---------------------------------HhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHHHHHHHHHHh
Confidence 111235678999999999887655 469999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCC
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDG 222 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G 222 (1245)
.+|++|+||||+++||+.|+.++.+.|.++.+. .++|++++||+.+|+..++|||++|+++
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~-~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEE-TRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999999988775 4678888999999999999999999984
No 58
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.7e-38 Score=308.99 Aligned_cols=177 Identities=28% Similarity=0.369 Sum_probs=160.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc------ccccceEEEEccCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ------ETFTRISGYCEQNDIHSP 774 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~~~ 774 (1245)
+++|+|||++|++||++-|+|||||||||||++|.+...+ ..|+|.+||.++.. ..+||.+|+|+||..+++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~p--t~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERP--TRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcC--CCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 5699999999999999999999999999999999997554 48999999998643 246789999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000872 775 YVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 854 (1245)
Q Consensus 775 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEp 854 (1245)
..||.||+.|..... +.+..+.+++|.++|+.+||.+.++.. ...||||||||++||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARAL-----PSQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcC-----ccccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 999999999987766 345667778899999999999988765 347999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000872 855 TSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQP 887 (1245)
Q Consensus 855 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p 887 (1245)
|-+||+..+..|++.+.++.+.|.||++.||+-
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~ 197 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL 197 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH
Confidence 999999999999999999988899999999974
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.4e-38 Score=335.59 Aligned_cols=202 Identities=29% Similarity=0.409 Sum_probs=170.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++.+|+++.|+ ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCch
Confidence 467888888763 45799999999999999999999999999999999997664 389999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSE-VNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+.+.++|+||.......+||+|.+.++..-..... ...++.++.++++++.+|+.+.++..+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 43 4567889999999988889999999987643221111 123444457999999999999998775 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+.|||||+++|+||+||||||+||...+.++++.++++.+ +|+|||+++|++.-. ...-|+
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A-~ryad~ 208 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLA-ARYADH 208 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH-HHhCCE
Confidence 999999999999999999999999999999999999999999984 599999999999743 344454
No 60
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.1e-38 Score=321.74 Aligned_cols=193 Identities=25% Similarity=0.416 Sum_probs=164.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+|||||||||||++|.|+++|+ +|+|.++|+++.... .++++|+++|+-.+|.++||+||+.|..+-
T Consensus 36 i~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre 112 (263)
T COG1127 36 ILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLRE 112 (263)
T ss_pred EEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHh
Confidence 47999999999999999999999998 999999999986543 246799999999999999999999996543
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCccc-ccccccCccccccccccchhh
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVC-ADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~~t~vg~~~~~~LSGGqrqRv 153 (1245)
+.. +|+. ..++.+..-++..||... ++. .+..||||+|||+
T Consensus 113 ~~~-------------------lp~~--------------~i~~lv~~KL~~VGL~~~~~~~-----~PsELSGGM~KRv 154 (263)
T COG1127 113 HTK-------------------LPES--------------LIRELVLMKLELVGLRGAAADL-----YPSELSGGMRKRV 154 (263)
T ss_pred hcc-------------------CCHH--------------HHHHHHHHHHHhcCCChhhhhh-----CchhhcchHHHHH
Confidence 210 0110 122345567788899875 554 4456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+||||++.||+++++||||+||||.++..+-++++++.+.. +.|++++||+.++++..||++++|.+|+|++.|+++++
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999998765 56677799999999999999999999999999999998
Q ss_pred HH
Q 000872 234 EQ 235 (1245)
Q Consensus 234 ~~ 235 (1245)
.+
T Consensus 234 ~~ 235 (263)
T COG1127 234 LA 235 (263)
T ss_pred Hh
Confidence 54
No 61
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=312.11 Aligned_cols=191 Identities=31% Similarity=0.406 Sum_probs=170.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+|||||||||+|++|++++.|+ +|.|+++|.+..... .++.+|.++.+..++..+|++|||.|.+++.++.
T Consensus 30 i~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~ 106 (245)
T COG4555 30 ITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGLS 106 (245)
T ss_pred EEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhhh
Confidence 58999999999999999999999998 999999998875433 3688999998889999999999999998875421
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
+.+.+.+++++.+.|+|.++.|+.+|+ +|-|+||||+||||
T Consensus 107 ----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~-----~S~G~kqkV~iARA 147 (245)
T COG4555 107 ----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE-----FSTGMKQKVAIARA 147 (245)
T ss_pred ----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh-----hchhhHHHHHHHHH
Confidence 122345678899999999999999985 99999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|++++|||||||||..+...+.+.+++++. .+++++..+|.++++.++||+|+++++|++++.|+.+++..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 9999999999999999999999999999998865 46778889999999999999999999999999999887754
No 62
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=352.64 Aligned_cols=206 Identities=29% Similarity=0.455 Sum_probs=178.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++++|||||||||||++|+|...|+ +|+|.++|++++...+ +|.+++|+|+..+||.|||+||+.|+.+.+....
T Consensus 33 f~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~ 109 (352)
T COG3842 33 FVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLK 109 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCCC
Confidence 36899999999999999999999998 9999999999988766 5789999999999999999999999987432100
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
..+.+++++++++.++|++.++.+ +..|||||||||+|||||
T Consensus 110 ---------------------------------~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQqQRVALARAL 151 (352)
T COG3842 110 ---------------------------------KAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQQRVALARAL 151 (352)
T ss_pred ---------------------------------HHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHHHHHHHHHHh
Confidence 011235678899999999877654 456999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHHHh
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFFIS 239 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f~~ 239 (1245)
+.+|++||||||.|+||.+-+.++..-|+++.+.. +.|.+.+||+.+|++.++|||+||++|+|...|+++++
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~ei------ 224 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEI------ 224 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHH------
Confidence 99999999999999999999999999999998765 67778899999999999999999999999999999998
Q ss_pred CCCCCCCCCChhhHHHH
Q 000872 240 MGFKCPKRKGIADFLQE 256 (1245)
Q Consensus 240 ~G~~~~~~~~~~~~~~~ 256 (1245)
|..|...-.++|+.+
T Consensus 225 --Y~~P~~~fVA~FiG~ 239 (352)
T COG3842 225 --YERPATRFVADFIGE 239 (352)
T ss_pred --hhCcchHHHHHHhCc
Confidence 455665556666654
No 63
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.2e-38 Score=337.33 Aligned_cols=195 Identities=31% Similarity=0.456 Sum_probs=166.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||||+|+|.++|. +|+|.++|+++..... .+.+|||||.+...+.+||+|-+.++..-+.
T Consensus 30 i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~- 105 (258)
T COG1120 30 ITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHL- 105 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCccc-
Confidence 58999999999999999999999988 9999999999877654 4789999999988899999999998643210
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
.+... ...+.++.+++.++.+|+.+.++..+. .||||||||+.|||
T Consensus 106 -~~~~~----------------------------~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSGGerQrv~iAr 151 (258)
T COG1120 106 -GLFGR----------------------------PSKEDEEIVEEALELLGLEHLADRPVD-----ELSGGERQRVLIAR 151 (258)
T ss_pred -ccccC----------------------------CCHhHHHHHHHHHHHhCcHHHhcCccc-----ccChhHHHHHHHHH
Confidence 11100 001112357788999999999986665 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
||+++|+||+||||||+||...+.++++.++++++. .+.|++++.|+.+.+..+||++++|++|+++.+|+++++.
T Consensus 152 ALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 152 ALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999999999865 4677888999999999999999999999999999988763
No 64
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-37 Score=310.14 Aligned_cols=195 Identities=23% Similarity=0.327 Sum_probs=166.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC---CCeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT---RGYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~---~~~~~G~i~~~g 751 (1245)
.++.+|+++.+ +.+.+|+|||+.|++++++|++|||||||||||++|.+..+ .-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 56778887765 34579999999999999999999999999999999998543 236899999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++-. ..+|+.+|.|+|.+.-|| +|++||+.|+.++..-.+ ++-++.|++.|+...|++-........ ..
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-a~ 148 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-AL 148 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC-cc
Confidence 87633 357889999999999999 999999999988775433 677888999999999986443333222 34
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
+|||||+|||||||+|+-+|+||+||||||+|||.+...|-+++.++. +.-|||++||.+.
T Consensus 149 ~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq 209 (253)
T COG1117 149 GLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ 209 (253)
T ss_pred CCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH
Confidence 699999999999999999999999999999999999999999999997 5799999999764
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-37 Score=316.97 Aligned_cols=200 Identities=29% Similarity=0.404 Sum_probs=173.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+++++++.+. +.+.+++|||++|++||+++||||||+||||||+++.|...+ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 57888887654 456899999999999999999999999999999999998775 489999999886
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000872 755 NQ------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-RQALVGLPGVNG 827 (1245)
Q Consensus 755 ~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~ 827 (1245)
.. ...++..|+++|+-.+|..+||+||+.|. +|...+.+++..++.+..-++.+||... .+.. ...
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 13567799999999999999999999875 3444566778888889999999999886 4543 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+|||++||||++.||+++|+||||+||||.++..+-+.|+++.++ |.|++++|||.. +++...|+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Dr 215 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADR 215 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhce
Confidence 9999999999999999999999999999999999999999999999766 899999999976 56777777
No 66
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=7.3e-38 Score=304.51 Aligned_cols=190 Identities=23% Similarity=0.383 Sum_probs=165.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
++||+||||||||||||+|+|...|. +|+|.+||.+.+...+ +|.++.++|++.+|..+||.+|+-++..-. -
T Consensus 27 ~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~---L 100 (231)
T COG3840 27 IVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPG---L 100 (231)
T ss_pred EEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCCcc---c
Confidence 48999999999999999999999988 9999999999876655 578999999999999999999999875311 0
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
++...+ ++.++.++...||..+.+...++ |||||||||++||+|
T Consensus 101 ------kL~a~~-------------------------r~~v~~aa~~vGl~~~~~RLP~~-----LSGGqRQRvALARcl 144 (231)
T COG3840 101 ------KLNAEQ-------------------------REKVEAAAAQVGLAGFLKRLPGE-----LSGGQRQRVALARCL 144 (231)
T ss_pred ------ccCHHH-------------------------HHHHHHHHHHhChhhHhhhCccc-----cCchHHHHHHHHHHH
Confidence 011111 23467788999999999877764 999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+.+-+|++||||+|+|||.-+.++...+.+++.. ++.|++++||+.+++...+|+++++++|+|.++|+.++.
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E-~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~ 217 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDE-RKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQEL 217 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHH
Confidence 9999999999999999999999999999999875 567777888999999999999999999999999998775
No 67
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.5e-37 Score=349.40 Aligned_cols=194 Identities=32% Similarity=0.483 Sum_probs=169.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--VPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++++||||||||||||+|+|.++|+ +|+|.++|.+.... ..++.+||++|++.+++.+||+||+.|.+.+++..
T Consensus 33 i~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~ 109 (293)
T COG1131 33 IFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLS 109 (293)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCC
Confidence 57999999999999999999999987 99999999887653 34578999999999999999999999998876531
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
. ...++.++++++.+||++..+.++ ++||+|||||++||+|
T Consensus 110 ~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~kqrl~ia~a 150 (293)
T COG1131 110 K----------------------------------EEAEERIEELLELFGLEDKANKKV-----RTLSGGMKQRLSIALA 150 (293)
T ss_pred h----------------------------------hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHHHHHHHHHHH
Confidence 1 001235678999999998555444 4699999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFF 237 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f 237 (1245)
|+++|+++||||||+||||.++..+++.|+++++. ++++|+++||..+++..+||+|++|++|++++.|+.+++...+
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~ 228 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKF 228 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhh
Confidence 99999999999999999999999999999999874 4478888999999999999999999999999999988876644
No 68
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-32 Score=363.96 Aligned_cols=201 Identities=22% Similarity=0.344 Sum_probs=171.1
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|++..+.. +++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 46888998876631 234699999999999999999999999999999999998664 48999999998
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 754 KNQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 754 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. ...++.+++++++++.+||.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 743 2345679999999999999999999999877653 233445567899999999998877664 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||+++|++. ++-...|+
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDr 1129 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDR 1129 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999985 5999999999985 44455676
No 69
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=316.35 Aligned_cols=198 Identities=25% Similarity=0.370 Sum_probs=173.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++|+|++..+ ..+.+++|+|++|++||.+.++|||||||||+|++|.+..++ .+|+|.+||.++.
T Consensus 2 I~~~nvsk~y-------------~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRY-------------GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhc-------------CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 4677776544 356799999999999999999999999999999999998765 4899999999875
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCH
Q 000872 756 Q---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP--LRQALVGLPGVNGLST 830 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSg 830 (1245)
. ..+|+.+|||-|...+||.+||.||+.+-..+. ..++++.+++++|+++.+||.+ +.+.. .+.|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 467899999999999999999999998776655 4577888899999999999975 55544 467999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+|||.+||||+.+|+||++|||.+.||+-++..+++-++++.++ |+|||++||+-. |-+.+-|+
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadr 205 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADR 205 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhce
Confidence 9999999999999999999999999999999999999999998755 999999999875 55677787
No 70
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-37 Score=308.94 Aligned_cols=206 Identities=25% Similarity=0.417 Sum_probs=161.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCCc-----ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEFV-----PQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+||++|||||||||||+++....+ |..+++|+|.++|+++.... .++++|+|+|.|.-|| +|++||+.++.+
T Consensus 35 VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r 113 (253)
T COG1117 35 VTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLR 113 (253)
T ss_pred eEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHH
Confidence 589999999999999999988654 44578999999999985542 3688999999999888 999999999998
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc-cccccccCccccccccccchh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV-CADTVVGDEMLRGISGGQRKR 152 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrqR 152 (1245)
+++..+ + + + ++++|..|+.-+|=+ +.|.. ++...+|||||+||
T Consensus 114 ~~g~~~--~---~---------------l--------------deiVe~sLk~AaLWdEVKDrL--~~sa~~LSGGQQQR 157 (253)
T COG1117 114 LHGIKD--K---E---------------L--------------DEIVESSLKKAALWDEVKDRL--HKSALGLSGGQQQR 157 (253)
T ss_pred hhccch--H---H---------------H--------------HHHHHHHHHHhHhHHHhHHHh--hCCccCCChhHHHH
Confidence 876422 0 0 0 111222222222211 11111 11223599999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhh
Q 000872 153 VTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 153 v~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~ 232 (1245)
++|||||.-+|+|||||||||+|||.+...|.+++.++++ .-||+++||++..+....|+...+..|++++.|+.++
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 9999999999999999999999999999999999999874 4577889999999999999999999999999999988
Q ss_pred HHHHHHhCCCCCCCCCChhhHH
Q 000872 233 VEQFFISMGFKCPKRKGIADFL 254 (1245)
Q Consensus 233 ~~~~f~~~G~~~~~~~~~~~~~ 254 (1245)
+ |..|++....||+
T Consensus 235 i--------F~~P~~~~TedYi 248 (253)
T COG1117 235 I--------FTNPKHKRTEDYI 248 (253)
T ss_pred h--------hcCccHHHHHHHh
Confidence 7 4556666555554
No 71
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-37 Score=325.69 Aligned_cols=193 Identities=25% Similarity=0.411 Sum_probs=162.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEecccc--ccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHD--IHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+|+|+|.++|. +|+|.++|.+......+.+||||||.. .+-...||+|.+..+...+.
T Consensus 32 ~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~-- 106 (254)
T COG1121 32 ITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKK-- 106 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccc--
Confidence 58999999999999999999999988 999999999887766667899999954 34455799999997632211
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.+.+.. . .+.++.++++|+.+|+.+.+|..+|+ |||||+|||-||||
T Consensus 107 g~~~~~---~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~-----LSGGQ~QRV~lARA 153 (254)
T COG1121 107 GWFRRL---N-------------------------KKDKEKVDEALERVGMEDLRDRQIGE-----LSGGQKQRVLLARA 153 (254)
T ss_pred cccccc---c-------------------------HHHHHHHHHHHHHcCchhhhCCcccc-----cCcHHHHHHHHHHH
Confidence 111100 0 01134578899999999999988886 99999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|+++|++|+|||||+|+|+.++..+.++|+++++. +++|+++||+...+.++||+|+.|++ ++++.|+++++.
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~ 226 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVL 226 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhcc
Confidence 99999999999999999999999999999999874 77888899999999999999999955 688999988763
No 72
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=337.20 Aligned_cols=199 Identities=28% Similarity=0.400 Sum_probs=176.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. ...+|+|+|++|+.||.++|+|||||||||||++|+|...+ .+|+|.|+|.++
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~--~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEP--TSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 467777765542 22299999999999999999999999999999999998664 489999999998
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
+. ...+|.+++|+|+..++|.+||+||+.|+.+++ ..++++.+++|+++.+.|+|.+..|... +.||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 76 456788999999999999999999999998776 4567888999999999999999998764 47999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||||+++|+++++|||.|.||+..+..+...|+++.++ |.|+|.+||+.. |...+-|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladr 203 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADR 203 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCE
Confidence 9999999999999999999999999999999999999998755 899999999975 66777887
No 73
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=310.46 Aligned_cols=204 Identities=25% Similarity=0.315 Sum_probs=170.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..++ +++++|+|||+.|++||++||+|+|||||||||++|.|..++ .+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~--t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDP--TSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCC--CcceEEecccch
Confidence 477888876552 456799999999999999999999999999999999997654 489999999765
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000872 755 NQ------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-----SEVNSKTREMFVEEVMELVELNPLRQALVGLP 823 (1245)
Q Consensus 755 ~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 823 (1245)
.. ..+++.+||++|+..+.+.++|.||+..+..-+.+ -....++.++.+-+.|+.+|+.+.+-+..+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 34678899999999999999999999876433322 122334555667889999999998877654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhhc
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
.|||||+|||+|||+|+.+|+|++.|||+++||+.++..+|+.|+++.+ +|.|||++.||.... -+.+|+.
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA-~~Y~~Ri 218 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLA-KKYADRI 218 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHH-HHHHhhh
Confidence 6999999999999999999999999999999999999999999999975 489999999997532 4567773
No 74
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1e-36 Score=319.45 Aligned_cols=180 Identities=27% Similarity=0.426 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..++|++||+||+.+...
T Consensus 33 ~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~ 109 (226)
T COG1136 33 FVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLL 109 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHH
Confidence 47999999999999999999999987 9999999988865542 3679999999999999999999998776
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCccccc-ccccCccccccccccchh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCAD-TVVGDEMLRGISGGQRKR 152 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-t~vg~~~~~~LSGGqrqR 152 (1245)
+.+.... +.++..+.+++.+||++..+ ..+. .||||||||
T Consensus 110 ~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p~-----eLSGGqqQR 150 (226)
T COG1136 110 IAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKKPS-----ELSGGQQQR 150 (226)
T ss_pred HcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCCch-----hcCHHHHHH
Confidence 5432110 11234567889999997665 4444 599999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 153 VTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 153 v~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
|+|||||+.+|++++.||||.+||+.++..+++.++++++. .++|++++||+. ++...|||++.|.+|++
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~-~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP-ELAKYADRVIELKDGKI 220 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH-HHHHhCCEEEEEeCCee
Confidence 99999999999999999999999999999999999999864 467788899986 56679999999999984
No 75
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-36 Score=321.85 Aligned_cols=190 Identities=29% Similarity=0.431 Sum_probs=171.8
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCe---eCCc-ccccceEEEEccCCCCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGY---PKNQ-ETFTRISGYCEQNDIHSP 774 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~---~~~~-~~~~~~~~~v~q~~~~~~ 774 (1245)
+...+++|||++|+.||++|++|||||||||||++|+|...+ ..|.|.+||. +.+. ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 455689999999999999999999999999999999998765 4899999999 5444 344578999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000872 775 YVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 854 (1245)
Q Consensus 775 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEp 854 (1245)
.+||.||+.|+..++ ...+++.+.+.+|+++|+.+.|++.++.. ...|||||||||++||||+..|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998887 44566778888999999999999998876 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 855 TSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 855 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.++||..-+..+.+.|+++.++ |.|++++||++. +.++.+|+
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladr 207 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADR 207 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcce
Confidence 9999999999999999999766 999999999986 88999998
No 76
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=311.13 Aligned_cols=200 Identities=25% Similarity=0.370 Sum_probs=166.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+|||||||||||++|.|..+|+ +|+|.+||.++.... .++.+||++|++.+.+.+||.+|+..+..-
T Consensus 32 ~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~ 108 (258)
T COG3638 32 MVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLG 108 (258)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcc
Confidence 58999999999999999999999987 999999998876543 247899999999999999999999987532
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
+. ++.+ ....+.+..| +..+-..|+.+|+.+.+.++.+. |||||+|||+
T Consensus 109 ~~--s~~~---------slfglfsk~d---------------k~~Al~aLervgi~~~A~qra~~-----LSGGQQQRVa 157 (258)
T COG3638 109 YT--STWR---------SLFGLFSKED---------------KAQALDALERVGILDKAYQRAST-----LSGGQQQRVA 157 (258)
T ss_pred cc--hHHH---------HHhCCCCHHH---------------HHHHHHHHHHcCcHHHHHHHhcc-----CCcchhHHHH
Confidence 21 1111 1111111111 22344578999999988888774 9999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+++|++++-|||+++|||.+++.+++.|++++... +.|+++..|..+.+.++||||+-|++|+|+|+||++++.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~-g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQED-GITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 9999999999999999999999999999999999998864 556666788899999999999999999999999998875
Q ss_pred H
Q 000872 235 Q 235 (1245)
Q Consensus 235 ~ 235 (1245)
+
T Consensus 237 ~ 237 (258)
T COG3638 237 D 237 (258)
T ss_pred H
Confidence 4
No 77
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-37 Score=302.71 Aligned_cols=185 Identities=29% Similarity=0.359 Sum_probs=168.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC--cccccceEEEEccCCCCCCCCCHH
Q 000872 702 VLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN--QETFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 702 ~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~--~~~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
.+++||||+++.||++||+|+|||||||+|++|++...+ .+|.|++||.+.. +...++.+|.++.+--++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 489999999999999999999999999999999998775 4899999998853 356788899999878888999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 859 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD 859 (1245)
|||.|.+.+. +....+.+++.+++.+.++|.++.|+.+| ++|-|+||||+|||||++||++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999999886 45667778899999999999999999876 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 860 ARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+...+.+.++++.+.|++||.++|..+ ++-++.|+
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDr 202 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDR 202 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhhe
Confidence 99999999999999888999999999865 66667887
No 78
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=336.59 Aligned_cols=200 Identities=26% Similarity=0.394 Sum_probs=176.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+ +...+|+|+|++|++||.++++|||||||||||++|+|...+ .+|+|.+||+++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 57788876554 356799999999999999999999999999999999998765 489999999998
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
+. ...+|.+|+|+|+-.+||.|||.||+.|+.+++ ....+++.+++|+++++.++|.+.++..+ ..||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 65 456788999999999999999999999987644 34456678889999999999999888764 47999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||||+.+|++|+||||-|+||..-+..++.-|+++.++ |.|.|.+|||.. |-+.+=|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDr 206 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDR 206 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccc
Confidence 9999999999999999999999999999999999999998654 999999999986 55667777
No 79
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-35 Score=336.25 Aligned_cols=199 Identities=27% Similarity=0.401 Sum_probs=171.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. .+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 578888887652 24699999999999999999999999999999999998664 489999999986
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
.. ...++.+||++|+..+++.+||+|++.|.+.++. ....+..++++++++.++|.+..++.+ +.|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2356789999999999999999999998776542 233444566889999999998877765 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+..|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~ 207 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDR 207 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999877999999999986 56666776
No 80
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.8e-35 Score=319.13 Aligned_cols=200 Identities=23% Similarity=0.315 Sum_probs=165.7
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+.. ..+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.+||.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 567888876631 113599999999999999999999999999999999998654 4899999998763
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. .+++.++|++|++.+++.+||.|++.+....+. ...++.+++++++++.+|+.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245679999999988899999999988754331 223345567899999999987766554 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~ 207 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHR 207 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998777899999999985 44445565
No 81
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-35 Score=329.57 Aligned_cols=195 Identities=18% Similarity=0.180 Sum_probs=141.2
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..+.+.++++.++. +..+++.+++..++.-...+++|+||+||||+++++.|...+ ..|.+.+++
T Consensus 361 p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~-- 425 (582)
T KOG0062|consen 361 PNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP-- 425 (582)
T ss_pred CeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc--
Confidence 35778888766532 112688999999999999999999999999999999986543 367776665
Q ss_pred CCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 754 KNQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 754 ~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
+..++|..|...-+..+.|.+-- +....+- +.+ ++..++-+..+||..-. .-. ...+||||||
T Consensus 426 ------r~ri~~f~Qhhvd~l~~~v~~vd-~~~~~~p--G~~----~ee~r~hl~~~Gl~g~l---a~~-si~~LSGGQK 488 (582)
T KOG0062|consen 426 ------RLRIKYFAQHHVDFLDKNVNAVD-FMEKSFP--GKT----EEEIRRHLGSFGLSGEL---ALQ-SIASLSGGQK 488 (582)
T ss_pred ------cceecchhHhhhhHHHHHhHHHH-HHHHhCC--CCC----HHHHHHHHHhcCCCchh---hhc-cccccCCcch
Confidence 45688999987665555554433 3333331 222 23356667788887421 111 2567999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhcCCCCccCCCC
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAGIPGVSKIRDG 908 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~~~~~~~~~~~ 908 (1245)
-||++|.....+|.+|+|||||++||..+-..+.+.|+.. +..||+++|+-+ ..+..++....|.++
T Consensus 489 srvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-----fi~~~c~E~Wvve~g 555 (582)
T KOG0062|consen 489 SRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-----FISSLCKELWVVEDG 555 (582)
T ss_pred hHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-----HHhhcCceeEEEcCC
Confidence 9999999999999999999999999999999999999875 467999999753 334444444334333
No 82
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.8e-35 Score=333.39 Aligned_cols=202 Identities=22% Similarity=0.298 Sum_probs=170.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|++..+... ...+.+|+|||+++++||++||+||||||||||+++|+|..++ .+|+|.+||.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 5688888776311 1124699999999999999999999999999999999998664 4899999999864
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. ..++.+||++|+..+++..||+||+.|....+ ..++++.++++.++++.+||.+..|..+ +.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999998875543 2345566677899999999998877654 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||+|||||+++|++|+||||||+||+.++..+++.|+++.++ |.|||+++|++. .+.+..|+
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~ 210 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDC 210 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999765 899999999975 55566777
No 83
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=342.63 Aligned_cols=191 Identities=25% Similarity=0.390 Sum_probs=164.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.+|||+|++.++|.+||+||+.|+.+..+.
T Consensus 32 ~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~-- 106 (356)
T PRK11650 32 FIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGM-- 106 (356)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCC--
Confidence 47999999999999999999999987 9999999998865433 46799999999999999999999997653211
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
... +.+..++++++.+||++..+..+. .|||||||||+|||||
T Consensus 107 --------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~QRvalARAL 149 (356)
T PRK11650 107 --------PKA------------------------EIEERVAEAARILELEPLLDRKPR-----ELSGGQRQRVAMGRAI 149 (356)
T ss_pred --------CHH------------------------HHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHH
Confidence 000 112345778999999887776554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|++||||||||+||+.++..+.+.|+++.+. .+++++++||+..++..++|+|++|++|+++..|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 9999999999999999999999999999998753 3667888999999999999999999999999999998873
No 84
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-35 Score=321.24 Aligned_cols=198 Identities=26% Similarity=0.364 Sum_probs=164.8
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+. .+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 4667776652 23599999999999999999999999999999999998654 48999999987643
Q ss_pred ------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 757 ------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 757 ------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
..+++.++|++|++.+++.+||.|++.+...... ....++.+++++++++.+|+.+..+..+ +.|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2345679999999999999999999988643221 2234444567889999999987766554 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+..|+
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~ 206 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADR 206 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999999998764 899999999986 45566676
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-35 Score=336.05 Aligned_cols=200 Identities=27% Similarity=0.374 Sum_probs=172.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. +.+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 367888877652 124699999999999999999999999999999999998664 489999999987
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
.. ...++.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.+||.+..+..+ +.||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 43 234578999999999999999999999986543 2345566678999999999998877664 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.++.|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~ 204 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADR 204 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999985 67777887
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=339.53 Aligned_cols=191 Identities=25% Similarity=0.388 Sum_probs=164.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 34 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~- 109 (351)
T PRK11432 34 MVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVP- 109 (351)
T ss_pred EEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCC-
Confidence 47999999999999999999999988 9999999998865444 478999999999999999999999986533210
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
+. +.++.++++++.+||.+..+..+ +.|||||||||+|||||
T Consensus 110 ---------~~------------------------~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 110 ---------KE------------------------ERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRVALARAL 151 (351)
T ss_pred ---------HH------------------------HHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHH
Confidence 00 11234677899999987776554 46999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|++|||||||++||+.++.++.+.|+++.+. .+++++++||+.+++..++|+|++|++|+++..|+++++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ-FNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999998753 3567788999999999999999999999999999998873
No 87
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.28 Aligned_cols=199 Identities=25% Similarity=0.373 Sum_probs=173.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 578889887652 24589999999999999999999999999999999998764 489999999987
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQE-TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
... ..++.+|||+|+..++|.+||+||+.|....+ ..++.+.+++++++++.+||.+..+..+ +.||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 33577999999999999999999999986544 2345666778999999999998877653 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|+++|++. ++.++.|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~ 206 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDT 206 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999986 66777787
No 88
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.9e-35 Score=336.51 Aligned_cols=190 Identities=25% Similarity=0.382 Sum_probs=162.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|+.+|+ +|+|.++|.++.... .++.++|++|+..+++..||+||+.+....
T Consensus 33 i~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~ 109 (343)
T TIGR02314 33 IYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLEL 109 (343)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHH
Confidence 47999999999999999999999988 999999999886542 245799999999999999999999986543
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+.. +. +.+..+.++++.+||.+..|..++ .|||||||||+
T Consensus 110 ~~~~----------~~------------------------~~~~~v~e~l~~vgL~~~~~~~~~-----~LSgGqkQRV~ 150 (343)
T TIGR02314 110 DNTP----------KD------------------------EIKRKVTELLALVGLGDKHDSYPS-----NLSGGQKQRVA 150 (343)
T ss_pred cCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHH
Confidence 2110 00 012235678999999988776554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|++|+||||||+||+.++..+++.|+++++.. +.+|++++|+.+.+.++||+|++|++|++++.|+++++
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v 228 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEI 228 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999999999987643 56788899999999999999999999999999998876
No 89
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-34 Score=334.29 Aligned_cols=199 Identities=26% Similarity=0.379 Sum_probs=173.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.+||.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p--~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQ--TAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 477888887652 24589999999999999999999999999999999998654 489999999886
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
.. ...+|.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.+||.+..+..+ +.||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 234577999999999999999999999986543 2345566778999999999998887653 47999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||+|+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|+++|++. ++..+.|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~ 204 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADR 204 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999996 67788887
No 90
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.6e-35 Score=339.80 Aligned_cols=192 Identities=21% Similarity=0.368 Sum_probs=164.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCcee--eEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKAS--GKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+|||||||||||++|+|..+|+ + |+|.++|+++..... ++.++||+|++.+++.+||+||+.|+.+.++.
T Consensus 33 ~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~ 109 (362)
T TIGR03258 33 LLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKM 109 (362)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 8 999999998765433 46799999999999999999999998653211
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
. .. +.+..++++++.+||++..+..++ +|||||||||+|||
T Consensus 110 ~----------~~------------------------~~~~~v~~~l~~~gL~~~~~~~~~-----~LSgGq~QRvaLAR 150 (362)
T TIGR03258 110 P----------KA------------------------DIAERVADALKLVGLGDAAAHLPA-----QLSGGMQQRIAIAR 150 (362)
T ss_pred C----------HH------------------------HHHHHHHHHHHhcCCCchhhCChh-----hCCHHHHHHHHHHH
Confidence 0 00 112346778999999988876655 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
||+.+|++|||||||++||+.++.++.+.|+++.+..++++++++||+.+++..++|+|++|++|+++..|+++++.
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999876432677888999999999999999999999999999998873
No 91
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.6e-35 Score=339.63 Aligned_cols=191 Identities=26% Similarity=0.414 Sum_probs=164.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.++|.+||+||+.|+.+.++.
T Consensus 32 ~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~-- 106 (353)
T TIGR03265 32 FVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGM-- 106 (353)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCC--
Confidence 47999999999999999999999988 9999999998865433 46799999999999999999999998653211
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.+. +.+..++++++.+||++..+..+. .|||||||||+|||||
T Consensus 107 --------~~~------------------------~~~~~~~~~l~~l~L~~~~~~~~~-----~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 107 --------GRA------------------------EVAERVAELLDLVGLPGSERKYPG-----QLSGGQQQRVALARAL 149 (353)
T ss_pred --------CHH------------------------HHHHHHHHHHHHcCCCchhhCChh-----hCCHHHHHHHHHHHHH
Confidence 000 112346779999999988776554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|+++|||||||+||+.++.++.+.|+++.+. .+.+++++||+.+++..++|+|++|++|+++..|+++++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999998654 3567788999999999999999999999999999998874
No 92
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-35 Score=347.86 Aligned_cols=194 Identities=27% Similarity=0.424 Sum_probs=162.9
Q ss_pred CeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCe
Q 000872 673 PFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGY 752 (1245)
Q Consensus 673 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~ 752 (1245)
...++|+|+++.|+.. ++.++|||+||+|+|||.+|++||||+||||+.++|.+..++ .+|+|.+||+
T Consensus 463 ~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~P--tsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDP--TSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCCeEEECCe
Confidence 3479999999999753 345799999999999999999999999999999999987554 5899999999
Q ss_pred eCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHcCCcccccccccCCC
Q 000872 753 PKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTRE-----MFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 753 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
|+.+ ..+++.+|+|.|++.++. -||+||+.|+.. ..+.++.. +-+.+-+ .++.+-.||.+|..+
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKG 602 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCcc
Confidence 9754 567889999999999986 499999998753 23333322 1222332 355667899999776
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
. .||||||||++|||||++||+||+|||+||.||++++..|+++|.+..+ ++|||+++|+.|
T Consensus 603 ~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS 664 (716)
T KOG0058|consen 603 S-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS 664 (716)
T ss_pred c-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh
Confidence 5 5999999999999999999999999999999999999999999988875 699999999886
No 93
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-35 Score=304.00 Aligned_cols=190 Identities=27% Similarity=0.329 Sum_probs=161.5
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEecccc--ccCCCCCHHHHHHHHHhcc
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV----PQRTAAYISQHD--IHIGEMTVRETLAFSARCQ 75 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~~~~ 75 (1245)
.+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||| .+-|..||++.|.-+...+
T Consensus 36 lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~ 112 (252)
T COG1124 36 LGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPH 112 (252)
T ss_pred EEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccC
Confidence 6899999999999999999999988 999999998775543 356789999997 5778899999998765443
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
+..+ .++++.++++.+||+...- ++.+..||||||||++|
T Consensus 113 ~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 113 GLSK------------------------------------SQQRIAELLDQVGLPPSFL----DRRPHELSGGQRQRIAI 152 (252)
T ss_pred CccH------------------------------------HHHHHHHHHHHcCCCHHHH----hcCchhcChhHHHHHHH
Confidence 2110 1122567899999987433 35556799999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||||..+|++||||||||+||+....+|++.|.++.+. .+.+.++|+|+...+..+||||+||++|++++.++.+++..
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999999764 56788889999999999999999999999999999988753
No 94
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.8e-35 Score=337.07 Aligned_cols=191 Identities=20% Similarity=0.324 Sum_probs=163.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|+.+|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.|+.+
T Consensus 21 i~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~ 97 (363)
T TIGR01186 21 IFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPE 97 (363)
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998865433 4679999999999999999999999765
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+.. +. +..+.+.++++.+||++..+..++ .|||||||||
T Consensus 98 ~~~~~----------~~------------------------~~~~~~~~~l~~vgL~~~~~~~p~-----~LSGGq~QRV 138 (363)
T TIGR01186 98 LLGWP----------EQ------------------------ERKEKALELLKLVGLEEYEHRYPD-----ELSGGMQQRV 138 (363)
T ss_pred HcCCC----------HH------------------------HHHHHHHHHHHhcCCchhhhCChh-----hCCHHHHHHH
Confidence 43210 00 012245678899999877776555 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++.++.+.|+++.+. .++||++++|+.+++..+||+|++|++|+++..|+++++
T Consensus 139 ~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 139 GLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999999999999999999988653 356788899999999999999999999999999998887
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 218 ~ 218 (363)
T TIGR01186 218 L 218 (363)
T ss_pred H
Confidence 4
No 95
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.7e-34 Score=333.17 Aligned_cols=199 Identities=24% Similarity=0.344 Sum_probs=172.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeE--EEEEECCe
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYIT--GNITISGY 752 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~--G~i~~~g~ 752 (1245)
.++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++. + |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~--~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA--GLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC--CCCEEEEECCE
Confidence 477888887653 235999999999999999999999999999999999986643 6 99999998
Q ss_pred eCCc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 753 PKNQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 753 ~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
+... ...++.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.+||.+..+..+ +.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 8643 234577999999999999999999999986543 2345566678999999999998887764 479999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..+.|+
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dr 208 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADK 208 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998776 799999999986 56777787
No 96
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=313.67 Aligned_cols=186 Identities=30% Similarity=0.405 Sum_probs=156.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-ETFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 4699999999999999999999999999999999998654 48999999987643 22346789999998888899999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 859 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD 859 (1245)
|++.+..... .......++.++++++.+|+.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765432 1223344556889999999987766654 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 860 ARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 200 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADR 200 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCE
Confidence 99999999999998764 899999999985 44455665
No 97
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.3e-35 Score=333.09 Aligned_cols=191 Identities=26% Similarity=0.391 Sum_probs=164.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++.+++.+||+||+.|.+...+..
T Consensus 35 i~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 111 (306)
T PRK13537 35 CFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLS 111 (306)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 999999999875432 2467999999999999999999999866543210
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
. .+....++++++.+||.+..++.++ +||||||||++||+|
T Consensus 112 ----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~a 152 (306)
T PRK13537 112 ----------A------------------------AAARALVPPLLEFAKLENKADAKVG-----ELSGGMKRRLTLARA 152 (306)
T ss_pred ----------H------------------------HHHHHHHHHHHHHcCCchHhcCchh-----hCCHHHHHHHHHHHH
Confidence 0 0011235678889999988887776 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+.+|++++|||||+|||+.++..+++.|+++++ .+++|++++|+.+++..+||+|++|++|++++.|+++++.+
T Consensus 153 L~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 153 LVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999864 36788889999999999999999999999999999988754
No 98
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.7e-34 Score=314.63 Aligned_cols=200 Identities=30% Similarity=0.413 Sum_probs=163.5
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+... ...+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehhh
Confidence 467777665310 0114699999999999999999999999999999999998654 48999999987643
Q ss_pred cc-------ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 757 ET-------FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 757 ~~-------~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. .++.++|++|++.+++.+||+|++.+....+. ....+.++.++++++.+|+.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 24579999999999999999999998765432 223344567889999999987766553 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++.. + +..|+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~ 209 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADR 209 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcE
Confidence 9999999999999999999999999999999999999999999976 58999999999864 3 35665
No 99
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=312.08 Aligned_cols=185 Identities=24% Similarity=0.398 Sum_probs=157.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYE 780 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 780 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+... ..++.++|++|+..+++.+|++|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 3599999999999999999999999999999999998654 48999999987643 34567899999998888999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000872 781 SLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 860 (1245)
Q Consensus 781 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~ 860 (1245)
++.+....+. ....+.++.++++++.+|+.+..+..+ +.||||||||++||++|+.+|++++|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9988655432 233444567889999999987766543 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 861 RAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 861 ~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 197 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDR 197 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhE
Confidence 9999999999998777899999999986 34455565
No 100
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-34 Score=330.59 Aligned_cols=187 Identities=28% Similarity=0.384 Sum_probs=161.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCC
Q 000872 700 KLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVT 777 (1245)
Q Consensus 700 ~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 777 (1245)
++.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 35699999999999999999999999999999999998654 48999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000872 778 VYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 857 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsg 857 (1245)
|+|++.+.+.++. ....+.+++++++++.+||.+..++.+ +.||||||||++||++|+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998766542 233444567899999999998777664 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 858 LDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 858 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+.++..+++.|++++++|+|||+++|++. ++.+..|+
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~ 193 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDR 193 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 9999999999999999877999999999986 55666776
No 101
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-34 Score=329.01 Aligned_cols=199 Identities=26% Similarity=0.385 Sum_probs=170.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 588899887652 34699999999999999999999999999999999998764 489999999986
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
.. ...++.+||++|+..+++.+||.|++.+.+.+.. ....+..++++++++.++|.+..++.++ .|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHHH
Confidence 43 2356779999999999999999999987665442 2333445567889999999988777654 699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+++|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++-+..|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~ 241 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDR 241 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999877999999999986 66667777
No 102
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-35 Score=314.58 Aligned_cols=190 Identities=26% Similarity=0.398 Sum_probs=164.1
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCC----CCcccceEEEecccc-ccCCCCCHHHHHHHHHhccC
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMH----EFVPQRTAAYISQHD-IHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~~-~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
++|+||||||||||+++|+|.++|. +|.|.++|.+.. ....++.+|||+|+| ..+..-||.|.+.|+....+
T Consensus 33 ~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g 109 (235)
T COG1122 33 VLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLG 109 (235)
T ss_pred EEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcC
Confidence 7899999999999999999999988 899999998865 223467899999996 35667799999999887654
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
... ++.+.+++++++.+||.+.++..+ ..|||||||||+||
T Consensus 110 ~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~p-----~~LSGGqkqRvaIA 150 (235)
T COG1122 110 LPR----------------------------------EEIEERVAEALELVGLEELLDRPP-----FNLSGGQKQRVAIA 150 (235)
T ss_pred CCH----------------------------------HHHHHHHHHHHHHcCchhhccCCc-----cccCCcceeeHHhh
Confidence 211 113456788999999998877544 46999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
.+|+.+|++|+|||||||||+..+.++++.++++... ++.|+|+++|+.+.+..++|++++|++|+++++|++.++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~ 227 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIF 227 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHh
Confidence 9999999999999999999999999999999999763 5678888999999999999999999999999999987664
No 103
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3e-34 Score=314.00 Aligned_cols=208 Identities=36% Similarity=0.582 Sum_probs=170.3
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-CeeEEEEEECCeeC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR-GYITGNITISGYPK 754 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~-~~~~G~i~~~g~~~ 754 (1245)
+.|+|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+. .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4577777766321 0135699999999999999999999999999999999997651 13589999999887
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEE-VMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
....+++.++|++|++.+++.+||+|++.+......+.........+.+++ .++.+++.+..++. .+.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 654567789999999999999999999998765443222222233334555 88889988766554 347999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|+
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~ 213 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDR 213 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCE
Confidence 9999999999999999999999999999999999999998777899999999998788888887
No 104
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=312.65 Aligned_cols=184 Identities=28% Similarity=0.418 Sum_probs=156.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYE 780 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 780 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... .++.++|++|+..+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 4699999999999999999999999999999999998654 48999999987642 3567899999998888899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000872 781 SLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 860 (1245)
Q Consensus 781 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~ 860 (1245)
++.+....+. ...+...+.++++++.+|+.+..+..+ +.||||||||++||++|+.+|++++|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754431 233444567889999999987666553 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 861 RAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 861 ~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.++..+.+.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADR 201 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999864 4899999999986 44455665
No 105
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.8e-35 Score=338.72 Aligned_cols=190 Identities=27% Similarity=0.392 Sum_probs=163.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.++|.+||+||+.|+.+.++..
T Consensus 42 ~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~- 117 (375)
T PRK09452 42 FLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTP- 117 (375)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCC-
Confidence 47999999999999999999999987 9999999998865433 467999999999999999999999976432110
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.. +.++.++++++.+||++..+..+. .|||||||||+|||||
T Consensus 118 ---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~QRVaLARaL 159 (375)
T PRK09452 118 ---------AA------------------------EITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQQRVAIARAV 159 (375)
T ss_pred ---------HH------------------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHH
Confidence 00 012245678899999887776554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+.+|++|||||||++||+.++..+.+.|+++.+. .+++++++||+..++..++|+|++|++|+++..|+++++
T Consensus 160 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i 232 (375)
T PRK09452 160 VNKPKVLLLDESLSALDYKLRKQMQNELKALQRK-LGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREI 232 (375)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999998764 366778899999999999999999999999999998887
No 106
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.5e-35 Score=287.44 Aligned_cols=185 Identities=25% Similarity=0.403 Sum_probs=162.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
++-|+||||||||||||+|.+...|+ +|+|.++|+++.... .+++||+|+||.-+++..||.||+.|..+.
T Consensus 30 f~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v 106 (223)
T COG2884 30 FVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRV 106 (223)
T ss_pred EEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhc
Confidence 46799999999999999999999988 999999999986543 258899999999999999999999998876
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+... .++++++.++|+..||.+.++...- .|||||||||+
T Consensus 107 ~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~lP~-----~LSGGEQQRva 147 (223)
T COG2884 107 IGKPP----------------------------------REIRRRVSEVLDLVGLKHKARALPS-----QLSGGEQQRVA 147 (223)
T ss_pred cCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcCcc-----ccCchHHHHHH
Confidence 54211 1234567889999999998886554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
||||++.+|++|+-||||..|||..+.+|++.+.++.+ .||||++.||+..-+..+-.+++.|++|+++....
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999999999976 48899999999998889999999999999986543
No 107
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=9.6e-34 Score=311.18 Aligned_cols=161 Identities=24% Similarity=0.312 Sum_probs=127.5
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHH
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYESL 782 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l 782 (1245)
-|+-=.+.|..||+++++||||-||||+.++|+|-.++. +|. .. .-.++|=||--.--...||++-|
T Consensus 356 ~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l 422 (591)
T COG1245 356 KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----EE-------DLKVSYKPQYISPDYDGTVEDLL 422 (591)
T ss_pred EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----Cc-------cceEeecceeecCCCCCcHHHHH
Confidence 344456788999999999999999999999999976643 454 11 12468888876555678999987
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHH
Q 000872 783 LYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 862 (1245)
Q Consensus 783 ~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~ 862 (1245)
.-...-+... .-...++.+-|.|.+..+..+ .+|||||.|||+||.+|.+++++.+||||++.||++.
T Consensus 423 ~~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEq 490 (591)
T COG1245 423 RSAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQ 490 (591)
T ss_pred HHhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHH
Confidence 5433222111 123467888889988887664 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-CCCEEEEEecCCC
Q 000872 863 AAVVMRTVRNTVD-TGRTVVCTIHQPS 888 (1245)
Q Consensus 863 ~~~i~~~l~~~~~-~g~tvi~~~H~p~ 888 (1245)
+..+-+.||+... .++|.+++-|+--
T Consensus 491 R~~vakvIRR~~e~~~kta~vVdHDi~ 517 (591)
T COG1245 491 RIIVAKVIRRFIENNEKTALVVDHDIY 517 (591)
T ss_pred HHHHHHHHHHHHhhcCceEEEEeccee
Confidence 9999999999874 4789999999854
No 108
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=330.20 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=170.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.+.
T Consensus 2 ~L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 66 (353)
T PRK10851 2 SIEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDV 66 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEC
Confidence 367788877652 24699999999999999999999999999999999998654 489999999986
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
.. ...++.++|++|+..++|.+||.||+.|....+.. ...+.++.+++++++++.++|.+..+..+ ..|||||
T Consensus 67 ~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq 141 (353)
T PRK10851 67 SRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQ 141 (353)
T ss_pred CCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHH
Confidence 43 23356799999999999999999999987654211 12344556678899999999988777654 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|+++|++. ++....|+
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dr 206 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADR 206 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998765 899999999985 56677787
No 109
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.1e-34 Score=310.70 Aligned_cols=199 Identities=26% Similarity=0.343 Sum_probs=164.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 45777776652 123599999999999999999999999999999999998654 4899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. .+++.++|++|+..+++.+|+.|++.+....+. ......++.++++++.+|+.+..+..+ +.||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 245678999999988889999999988754331 223344567889999999987655543 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 206 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHR 206 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999999998777999999999985 44455565
No 110
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.3e-34 Score=330.78 Aligned_cols=199 Identities=23% Similarity=0.334 Sum_probs=172.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478889887653 23599999999999999999999999999999999998764 489999999986
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
.. ...++.+||++|+..++|.+||.||+.|+...+ ..+..+.+++++++++.+||.+..+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 234577999999999999999999999876533 2344555667899999999998877664 47999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||+|+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..+.|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDr 214 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDR 214 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998765 899999999986 66777887
No 111
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.8e-34 Score=311.11 Aligned_cols=186 Identities=26% Similarity=0.362 Sum_probs=157.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc------cccceEEEEccCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE------TFTRISGYCEQNDIHSP 774 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~------~~~~~~~~v~q~~~~~~ 774 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... .+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 3699999999999999999999999999999999998654 489999999876421 24567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000872 775 YVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 854 (1245)
Q Consensus 775 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEp 854 (1245)
.+|++|++.+....+. ...++.++.++++++.+|+.+..+..+ +.||||||||++||++|+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988754432 233444567889999999987766553 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 855 TSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 855 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~ 205 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHR 205 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999998777999999999985 33444565
No 112
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.7e-34 Score=325.47 Aligned_cols=199 Identities=27% Similarity=0.380 Sum_probs=167.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 477888887652 23599999999999999999999999999999999998654 489999999876
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
.. ...++.+||++|+..+++.+||+|++.+.+... .....+..++++++++.+++.+..++.+ +.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 42 234567999999998889999999998755433 1233344456788999999988777664 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~ 204 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDR 204 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999877999999999986 55566776
No 113
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-34 Score=311.68 Aligned_cols=197 Identities=28% Similarity=0.367 Sum_probs=164.1
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+. .+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCc
Confidence 4667776552 24699999999999999999999999999999999998654 48999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 757 --ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 757 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
...++.++|++|+..+++.+||+|++.+....+. ...++.+++++++++.+|+.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2345678999999988899999999988755431 233344566899999999987766654 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~ 201 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDR 201 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998776 899999999986 44455565
No 114
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5e-34 Score=309.81 Aligned_cols=197 Identities=26% Similarity=0.388 Sum_probs=163.2
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCc
Confidence 4667776552 23599999999999999999999999999999999998654 48999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000872 757 E-TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKR 835 (1245)
Q Consensus 757 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr 835 (1245)
. ..++.++|++|+..+++..|++|++.+....+ ....++.+++++++++.+|+.+..+..+ +.||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 1 23457999999998888899999998865433 1233444567889999999987766654 4699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 836 LTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 836 ~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~ 200 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADR 200 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 99999999999999999999999999999999999998764 899999999985 44455565
No 115
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-35 Score=293.35 Aligned_cols=192 Identities=22% Similarity=0.381 Sum_probs=166.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++++|||||||||.+.++.|+.+|+ +|+|.++|.+++.... +.-+||+||++..|-.+||+|||....+.+.
T Consensus 32 iVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~ 108 (243)
T COG1137 32 IVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIRE 108 (243)
T ss_pred EEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhh
Confidence 57999999999999999999999998 9999999999987654 2458999999999999999999997665432
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
... .. .+.+.+.+.++++++|.+.++.+-. +||||||+|+.||
T Consensus 109 ~d~--------~~------------------------~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIA 151 (243)
T COG1137 109 KDL--------KK------------------------AERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIA 151 (243)
T ss_pred cch--------hH------------------------HHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHH
Confidence 100 00 0112346789999999999987654 4999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||+.+|+.++||||++|+||.+..+|.+.++.++. ++.-|+++-|+..|.++.|||.+++++|++..+|+++++.
T Consensus 152 RaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~ 227 (243)
T COG1137 152 RALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIV 227 (243)
T ss_pred HHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHh
Confidence 999999999999999999999999999999999976 4777888999999999999999999999999999999874
No 116
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-35 Score=303.09 Aligned_cols=204 Identities=26% Similarity=0.387 Sum_probs=172.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCccc----ceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQ----RTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+|...+|++|||.||+..+...+.
T Consensus 32 i~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~ 108 (250)
T COG0411 32 IVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARL 108 (250)
T ss_pred EEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhh
Confidence 58999999999999999999999998 99999999999877653 447788999999999999999998865432
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. +.......+ ...+..+..+.+..+|+.+||.+.+|+..|+ ||+|||||+.||
T Consensus 109 ~---~~~~l~~~~-------------------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~-----LsyG~qR~LEIA 161 (250)
T COG0411 109 G---LSGLLGRPR-------------------ARKEEREARERARELLEFVGLGELADRPAGN-----LSYGQQRRLEIA 161 (250)
T ss_pred h---hhhhhcccc-------------------chhhHHHHHHHHHHHHHHcCCchhhcchhhc-----CChhHhHHHHHH
Confidence 1 000000000 0001122345578899999999999998886 999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|||+.+|++|+||||.+||.+....++.+.++++++ ..+.++++|.|+++.++.+||||+||+.|+++.+|+++++.+
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999999999999999976 356889999999999999999999999999999999998853
No 117
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.1e-34 Score=311.61 Aligned_cols=202 Identities=27% Similarity=0.395 Sum_probs=166.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+... .....+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 4577887765311 0112699999999999999999999999999999999998654 4899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 756 Q--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 756 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
. ..+++.++|++|++.+++.+||+|++.+....+ .....+..+.++++++.+|+.+..+..+ +.||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999998889899999998765443 2234455567899999999987766553 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 205 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDR 205 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999998777999999999985 45556665
No 118
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-34 Score=329.39 Aligned_cols=199 Identities=24% Similarity=0.349 Sum_probs=171.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488888887652 23589999999999999999999999999999999998764 489999999886
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
.. ...++.+||++|+..++|.+||.||+.|....+ ..+..+.+++++++++.++|.+..+..+ ..||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 235678999999999999999999999876543 2345566678999999999998777654 47999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||+|+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++||++. +++.+-|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDr 219 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGR 219 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998865 4899999999986 66777787
No 119
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=309.51 Aligned_cols=192 Identities=25% Similarity=0.366 Sum_probs=170.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
|..|||-||||||||+++|.++.+|+ +|+|+++|.++...+. ++.+++|+|+..++|..||.||..|+.+
T Consensus 56 IfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe 132 (386)
T COG4175 56 IFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 132 (386)
T ss_pred EEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee
Confidence 46899999999999999999999988 9999999999866543 3679999999999999999999999998
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.++.+.. +.++++.+.++..||+...+.++. +||||+||||
T Consensus 133 v~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp~-----eLSGGMqQRV 173 (386)
T COG4175 133 VQGVPKA----------------------------------EREERALEALELVGLEGYADKYPN-----ELSGGMQQRV 173 (386)
T ss_pred ecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCcc-----cccchHHHHH
Confidence 8775321 112345678999999999987665 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
.|||||..+|+||++|||+|+|||--+.++.+-|.++.+.. ++||+.|+|+.+|++.+.|||.+|++|+|+..|+++++
T Consensus 174 GLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 174 GLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred HHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHH
Confidence 99999999999999999999999999999999998887765 56777899999999999999999999999999999998
Q ss_pred HH
Q 000872 234 EQ 235 (1245)
Q Consensus 234 ~~ 235 (1245)
..
T Consensus 253 l~ 254 (386)
T COG4175 253 LL 254 (386)
T ss_pred Hc
Confidence 53
No 120
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.3e-34 Score=329.94 Aligned_cols=191 Identities=29% Similarity=0.429 Sum_probs=162.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+||++|++.+++.+||+||+.+.++..+..
T Consensus 21 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~ 97 (302)
T TIGR01188 21 VFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLP 97 (302)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 999999998875421 2456999999999999999999999865443210
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.. +....++++++.+||++..++.++ .||||||||++||+|
T Consensus 98 ----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~a 138 (302)
T TIGR01188 98 ----------KD------------------------EAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAAS 138 (302)
T ss_pred ----------HH------------------------HHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHH
Confidence 00 011235678999999988777665 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+.+|++|||||||+|||+.++..+++.|+++++ .+++|++++|+.+++..+||++++|++|++++.|+++++.+
T Consensus 139 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 139 LIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE--EGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999865 36778889999999999999999999999999999888754
No 121
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-34 Score=282.00 Aligned_cols=181 Identities=27% Similarity=0.341 Sum_probs=154.2
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000872 706 GVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-ETFTRISGYCEQNDIHSPYVTVYESLLY 784 (1245)
Q Consensus 706 ~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~ 784 (1245)
..++.|++||++||+||||||||||||.++|...+ .+|+|+|||.+... ....|-++.++|+..+|..+||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 46788999999999999999999999999998765 48999999998754 4566778999999999999999999976
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000872 785 SAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 864 (1245)
Q Consensus 785 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~ 864 (1245)
+..- ....+ ++.++.++.+...+||.++.+.+.+ .||||||||+++||.|+++-+||+||||.|.||+.-+.
T Consensus 95 Gl~P--~LkL~-a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSP--GLKLN-AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCc--ccccC-HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 5321 11222 3445678999999999999887754 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 865 VVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 865 ~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++...+.++++ ++.|+++++|+|+ +.-..-|+
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~ 199 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADR 199 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhc
Confidence 99999999875 4899999999997 44445554
No 122
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-34 Score=313.10 Aligned_cols=202 Identities=28% Similarity=0.388 Sum_probs=165.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. .+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 467888887653 23599999999999999999999999999999999998654 489999999876
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQE-TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSS-EVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
... ..++.++|++|++.+++.+||+|++.+....+... .....+..+.++++++.+|+.+..+..+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 22456899999998888899999998865432110 0122334456789999999987666553 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~ 206 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADR 206 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998765 899999999985 45566676
No 123
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.5e-34 Score=314.06 Aligned_cols=189 Identities=29% Similarity=0.383 Sum_probs=157.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc---c-ccceEEEEccCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE---T-FTRISGYCEQNDIHSPYV 776 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~~~l 776 (1245)
+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 3599999999999999999999999999999999998654 489999999876432 1 234689999999999999
Q ss_pred CHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCee
Q 000872 777 TVYESLLYSAWLRLSSE-------VNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSII 849 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il 849 (1245)
||+|++.+....+.... ....+..+.++++++.+|+.+..+..+ +.||||||||++||++|+.+|+++
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA-----GELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988654332110 012344556889999999987666543 469999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 850 FMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 850 ~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~ 212 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADR 212 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999998777899999999986 45566676
No 124
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=330.72 Aligned_cols=199 Identities=26% Similarity=0.369 Sum_probs=169.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367888887652 23599999999999999999999999999999999998654 489999999886
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 755 NQ-ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 755 ~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
.. ...++.++|++|+..+++.+||+||+.|....+ ....++.+++++++++.+||.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 223467999999999999999999999876543 2234455667899999999988777654 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~ 203 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADK 203 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999998764 899999999986 66677787
No 125
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.9e-34 Score=327.91 Aligned_cols=188 Identities=23% Similarity=0.274 Sum_probs=163.2
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc---cc----cceEEEEccCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE---TF----TRISGYCEQNDI 771 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~---~~----~~~~~~v~q~~~ 771 (1245)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.+||.++... .+ ++.++||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 445699999999999999999999999999999999998764 489999999987532 22 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 772 HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 772 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
++|.+||+||+.|..... ....++..+++.++++.+||.+..+..+ ..|||||||||+|||||+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2345566778999999999988777654 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||+.++..+++.++++.++ |+|||+++|++. ++....|+
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~dr 199 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDR 199 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999998654 899999999986 45666777
No 126
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=333.44 Aligned_cols=195 Identities=26% Similarity=0.376 Sum_probs=163.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+||+||+.|+.+....
T Consensus 30 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~-- 104 (353)
T PRK10851 30 MVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPR-- 104 (353)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhccc--
Confidence 47999999999999999999999987 9999999998765433 36799999999999999999999987543100
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
+.. ... .+..+.++++++.+||++..+..+. .|||||||||+|||||
T Consensus 105 -~~~---~~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgGq~QRvalArAL 151 (353)
T PRK10851 105 -RER---PNA------------------------AAIKAKVTQLLEMVQLAHLADRYPA-----QLSGGQKQRVALARAL 151 (353)
T ss_pred -ccC---CCH------------------------HHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHH
Confidence 000 000 0112345778999999887776554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|+++||||||+|||+.++..+.+.|+++.+. .+.+++++||+..++..+||+|++|++|++++.|+++++.
T Consensus 152 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 152 AVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999998763 3667888999999999999999999999999999998873
No 127
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=295.67 Aligned_cols=192 Identities=23% Similarity=0.397 Sum_probs=157.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|+||+||||||++|+|..++. +|+|.++|++++...+ +.-++||||....|+.+||+|||..++....
T Consensus 31 iv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~ 107 (237)
T COG0410 31 IVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARR 107 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhccc
Confidence 58999999999999999999999976 9999999999987655 3569999999999999999999998764321
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. +.. .....+...+.+| .|.+..+.+-| .|||||||-++||
T Consensus 108 ~-~~~----~~~~~e~v~~lFP-----------------------------~Lker~~~~aG-----~LSGGEQQMLAia 148 (237)
T COG0410 108 D-KEA----QERDLEEVYELFP-----------------------------RLKERRNQRAG-----TLSGGEQQMLAIA 148 (237)
T ss_pred c-ccc----ccccHHHHHHHCh-----------------------------hHHHHhcCccc-----CCChHHHHHHHHH
Confidence 1 000 0000222222222 13333455555 4999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|||+++|++|+|||||.||-|.-..+|.+.++++++. ++.+|+.+.|+...+.+++||.+||.+|+|++.|+.+++.+
T Consensus 149 RALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 149 RALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred HHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999864 46788999999999999999999999999999999998753
No 128
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-34 Score=294.79 Aligned_cols=202 Identities=26% Similarity=0.314 Sum_probs=162.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++.+|++..+... .....+|+|||++|.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~---------~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGG---------KFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCC---------cchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 46778888766432 1122599999999999999999999999999999999998664 489999999775
Q ss_pred Ccc----cccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000872 755 NQE----TFTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGL 828 (1245)
Q Consensus 755 ~~~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 828 (1245)
... .+.+.+-+|+||+. +.|..||++.|.=.... .+.++. ++++.++++.+||.+-.-.+ ....|
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R----~P~eL 142 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDR----RPHEL 142 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhc----Cchhc
Confidence 443 46788999999975 56889999988644332 222333 33389999999997643221 23569
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 829 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 829 SgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||+||||||+.+|++|+||||||.||+..+..|++.|.++.++ |-|.|+++|+-+ -+..+.|+
T Consensus 143 SGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdR 211 (252)
T COG1124 143 SGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDR 211 (252)
T ss_pred ChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhh
Confidence 999999999999999999999999999999999999999999999754 779999999976 45556666
No 129
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=7.3e-34 Score=312.82 Aligned_cols=186 Identities=28% Similarity=0.387 Sum_probs=157.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc---c-ccceEEEEccCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE---T-FTRISGYCEQNDIHSPYV 776 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~~~l 776 (1245)
+.+|+|+|+.+++||++||+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 3599999999999999999999999999999999998654 489999999875421 1 235689999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000872 777 TVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 856 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTs 856 (1245)
|++|++.+....+. ....+..+.++++++.+|+.+..++.+ +.||||||||++||++|+.+|++|+|||||+
T Consensus 91 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 162 (232)
T cd03218 91 TVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDEPFA 162 (232)
T ss_pred cHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 99999987644331 223344556789999999987766553 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 857 GLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 857 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 163 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 202 (232)
T cd03218 163 GVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDR 202 (232)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999998777899999999986 55666676
No 130
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=334.92 Aligned_cols=191 Identities=24% Similarity=0.354 Sum_probs=163.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.+|||+|++.+++.+||.||+.|+.+.+..
T Consensus 47 ~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~-- 121 (377)
T PRK11607 47 IFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKL-- 121 (377)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCC--
Confidence 47999999999999999999999988 9999999998765433 46799999999999999999999997643211
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
... +.++.++++++.+||.+..+..+. +|||||||||+|||||
T Consensus 122 --------~~~------------------------~~~~~v~~~l~~l~L~~~~~~~~~-----~LSgGq~QRVaLARAL 164 (377)
T PRK11607 122 --------PKA------------------------EIASRVNEMLGLVHMQEFAKRKPH-----QLSGGQRQRVALARSL 164 (377)
T ss_pred --------CHH------------------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHH
Confidence 000 112345678999999877765554 6999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|++|||||||++||+.++..+.+.|+++.+.. +.+++.+||+.+++..++|++++|++|+++..|+++++.
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 99999999999999999999999999998886543 567788999999999999999999999999999998873
No 131
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-35 Score=291.86 Aligned_cols=195 Identities=25% Similarity=0.345 Sum_probs=169.8
Q ss_pred cccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCccc----ccceEEEEccCCC
Q 000872 696 VHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQET----FTRISGYCEQNDI 771 (1245)
Q Consensus 696 ~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~----~~~~~~~v~q~~~ 771 (1245)
+++++++++++||+.|++||++|++|||||||||.+.++.|...++ +|+|.+||.+++... .+.-+||.||+..
T Consensus 12 K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d--~G~i~ld~~diT~lPm~~RArlGigYLpQE~S 89 (243)
T COG1137 12 KSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD--SGKILLDDEDITKLPMHKRARLGIGYLPQEAS 89 (243)
T ss_pred HhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC--CceEEECCcccccCChHHHhhcCcccccccch
Confidence 3456778999999999999999999999999999999999987654 899999999886532 2334899999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 772 HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 772 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
.|-.+||+||++.....+.. +....+++++++++++++++.|+++... ..||||||||+-|||||+.+|+.++|
T Consensus 90 IFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLL 163 (243)
T COG1137 90 IFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILL 163 (243)
T ss_pred HhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEe
Confidence 99999999999877666632 2233566677899999999999998763 35999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhcC
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAGI 899 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~~ 899 (1245)
|||.+|+||-+-..|+++++.++++|.-|++|=|.-+ |..+..|+++
T Consensus 164 DEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaY 210 (243)
T COG1137 164 DEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAY 210 (243)
T ss_pred cCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEE
Confidence 9999999999999999999999999999999999887 6678888853
No 132
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-34 Score=327.74 Aligned_cols=202 Identities=23% Similarity=0.294 Sum_probs=168.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++++... ...+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5678888776310 1124699999999999999999999999999999999998654 4899999998864
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. .+++.+||++|+..+++.+||+||+.+....+ ..+.++.+++++++++.+||.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999998876543 2234445567899999999988776653 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+..|+
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~ 210 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDR 210 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998764 899999999986 55566776
No 133
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.9e-34 Score=308.40 Aligned_cols=182 Identities=29% Similarity=0.378 Sum_probs=152.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCC-CCCCCCHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDI-HSPYVTVY 779 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~-~~~~ltv~ 779 (1245)
+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+......++.++|++|+.. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4699999999999999999999999999999999998654 48999999988654445567999999964 34467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 859 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD 859 (1245)
|++.+..... . ..+++++++++.+|+.+..+..+ +.||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~-----~--~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL-----D--AGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc-----C--ccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 11245789999999988776654 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 860 ARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~ 195 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDR 195 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999998777999999999986 34445565
No 134
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=316.52 Aligned_cols=191 Identities=28% Similarity=0.386 Sum_probs=158.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 104 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLRE 104 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhh
Confidence 47999999999999999999999987 999999998875432 245699999999999999999999886432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
... . ... +....++++++.+||.+..++.++ .||||||||++
T Consensus 105 ~~~---~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ 146 (235)
T cd03261 105 HTR---L------SEE------------------------EIREIVLEKLEAVGLRGAEDLYPA-----ELSGGMKKRVA 146 (235)
T ss_pred ccC---C------CHH------------------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHH
Confidence 100 0 000 011235668889999877666554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..+||++++|++|++++.|+++++
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999999999999998653 356788899999999999999999999999999987765
No 135
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-34 Score=329.03 Aligned_cols=191 Identities=27% Similarity=0.374 Sum_probs=163.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+||++|++.+++.+||+||+.+.....+..
T Consensus 69 i~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 145 (340)
T PRK13536 69 CFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMS 145 (340)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999988 999999999875432 3467999999999999999999999755432110
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.. +....++++++.+||++..++.++ +||||||||++||+|
T Consensus 146 ----------~~------------------------~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G~kqrv~lA~a 186 (340)
T PRK13536 146 ----------TR------------------------EIEAVIPSLLEFARLESKADARVS-----DLSGGMKRRLTLARA 186 (340)
T ss_pred ----------HH------------------------HHHHHHHHHHHHcCCchhhCCChh-----hCCHHHHHHHHHHHH
Confidence 00 011234567888999988887776 499999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|+++||||||+|||+.++.++++.|++++. .+++|++++|+.+++.++||+|++|++|++++.|+++++.+
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999865 36788889999999999999999999999999999988754
No 136
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=309.04 Aligned_cols=196 Identities=25% Similarity=0.361 Sum_probs=162.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTP--TSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEc
Confidence 37888998876310 0114699999999999999999999999999999999998653 489999999886
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 755 NQET------F-TRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 755 ~~~~------~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
.... . ++.++|++|+..+++.+|++|++.+....+ ....++.+++++++++.+|+.+..+..+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4311 2 256899999998888999999998865432 1223444567899999999987666543 46
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCH
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSI 889 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~ 889 (1245)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++..
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~ 208 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL 208 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 999999999999999999999999999999999999999999999875 58999999999863
No 137
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=8e-34 Score=306.81 Aligned_cols=182 Identities=29% Similarity=0.397 Sum_probs=154.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-ETFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 3699999999999999999999999999999999998654 48999999987543 23456789999999888899999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 859 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD 859 (1245)
|++.+....+. . .+++++++++.+++.+..+..+ +.||||||||++||++|+.+|++++|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99987654321 1 1345788999999988766653 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 860 ARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.++..+.+.|+++.++|+|||+++|++. .+-+..|+
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~ 195 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADR 195 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCE
Confidence 99999999999998777899999999986 33344454
No 138
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-34 Score=340.39 Aligned_cols=193 Identities=22% Similarity=0.422 Sum_probs=158.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+||+|||||+||||+.++|...++|+ +|+|++||+|+.+.+. +++||+|.|+|.+|. -||+|||.++... .
T Consensus 496 ~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~~-~- 569 (716)
T KOG0058|consen 496 VVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLDN-A- 569 (716)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCCC-C-
Confidence 48999999999999999999999998 9999999999987764 588999999999775 5999999987541 0
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
+.++..++..+ ....|. ..++++.+||.||+++. .||||||||++|||
T Consensus 570 -----------------------t~e~i~~AAk~-----ANah~F---I~~~p~gY~T~VGEkG~-qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 570 -----------------------TDEEIEAAAKM-----ANAHEF---ITNFPDGYNTVVGEKGS-QLSGGQKQRIAIAR 617 (716)
T ss_pred -----------------------CHHHHHHHHHH-----hChHHH---HHhCccccccccCCccc-cccchHHHHHHHHH
Confidence 01111111111 011222 34689999999999877 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||++||.||||||.||+||+.+...+.+.|.+..+ +.|+++|.|..+.+ +.+|+|+++++|++++.|+++++.+
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRLSTV-~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRLSTV-RHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhhhHh-hhccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999999999999987653 46777789988766 5589999999999999999998854
No 139
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-33 Score=321.03 Aligned_cols=197 Identities=24% Similarity=0.366 Sum_probs=168.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|++.++. ++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67788877652 24699999999999999999999999999999999998654 4899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 756 Q--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 756 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
. ...++.+||++|+..+++.+||.|++.+.+.++. .+.++..++++++++.+||.+..+..+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998776542 233444566899999999998877664 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||++||++|+++|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+..|+
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~ 201 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDR 201 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999864 799999999986 56667777
No 140
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=334.14 Aligned_cols=191 Identities=25% Similarity=0.420 Sum_probs=162.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+||+||+.|+....+..
T Consensus 31 ~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~- 106 (369)
T PRK11000 31 FVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAK- 106 (369)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCC-
Confidence 47999999999999999999999987 9999999998754332 467999999999999999999999876432110
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.. +....++++++.+||++..+..++ +|||||||||+|||||
T Consensus 107 ---------~~------------------------~~~~~~~~~l~~lgL~~~~~~~~~-----~LSgGq~QRvaLAraL 148 (369)
T PRK11000 107 ---------KE------------------------EINQRVNQVAEVLQLAHLLDRKPK-----ALSGGQRQRVAIGRTL 148 (369)
T ss_pred ---------HH------------------------HHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHHHH
Confidence 00 012245678899999887776554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|++|||||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..+||++++|++|+++..|+++++.
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKR-LGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999998653 3567788999999999999999999999999999988773
No 141
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-35 Score=301.44 Aligned_cols=185 Identities=28% Similarity=0.448 Sum_probs=162.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-------ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-------PQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+|||-|+||||||||+|+|+|+.+|+ +|.|.+||+.+.+.. .+|++|||+||.-+||.+||+.||.|+..
T Consensus 26 vTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~ 102 (352)
T COG4148 26 ITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMW 102 (352)
T ss_pred eEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhc
Confidence 58999999999999999999999998 999999998764322 25789999999999999999999999753
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
... ....|++.+.||++|-.+...+ .|||||||||
T Consensus 103 ~~~----------------------------------------~~~fd~iv~lLGI~hLL~R~P~-----~LSGGEkQRV 137 (352)
T COG4148 103 KSM----------------------------------------RAQFDQLVALLGIEHLLDRYPG-----TLSGGEKQRV 137 (352)
T ss_pred ccc----------------------------------------hHhHHHHHHHhCcHHHHhhCCC-----ccCcchhhHH
Confidence 210 1124678899999998886655 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|+|||++.|++|+||||.+.||-.-..+++-.|.++.++. ..-|+-++|..+|+..++|+|++|++||+...|+.+++
T Consensus 138 AIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v 216 (352)
T COG4148 138 AIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEV 216 (352)
T ss_pred HHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHH
Confidence 99999999999999999999999999999999999998764 45567799999999999999999999999999998887
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 217 ~ 217 (352)
T COG4148 217 W 217 (352)
T ss_pred h
Confidence 4
No 142
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.1e-33 Score=307.11 Aligned_cols=198 Identities=25% Similarity=0.339 Sum_probs=162.9
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.++ .+.+|+++|++++|||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 4667776552 23599999999999999999999999999999999998654 48999999987632
Q ss_pred -----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 757 -----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 757 -----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
..+++.++|++|+..+++.+|+.|++.+...... ....++.+++++++++.+|+.+..+..+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345679999999988889999999987643111 1233344567889999999987666553 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~ 204 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADR 204 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999877899999999985 44455554
No 143
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=280.15 Aligned_cols=182 Identities=27% Similarity=0.406 Sum_probs=163.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYE 780 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 780 (1245)
..+|+|+|+.|.+||.++++||||||||||||+++|..++ ..|+|.+||+++.... ...|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 3599999999999999999999999999999999998764 4899999999875432 23488999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000872 781 SLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 860 (1245)
Q Consensus 781 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~ 860 (1245)
|+.|+.++| +..+.++.+++.+.+..+||.+..+..+ -.||||||||+.|||||..+|+.|+||||.+.||.
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999888 5678899999999999999999887664 36999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHH
Q 000872 861 RAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEA 894 (1245)
Q Consensus 861 ~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~ 894 (1245)
-|++.+++.|-++.+ .|+.++++||+-...+|-.
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieEAlfla 200 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEEALFLA 200 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhh
Confidence 999999999988865 5999999999887666643
No 144
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.1e-33 Score=301.09 Aligned_cols=178 Identities=26% Similarity=0.347 Sum_probs=150.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-----ccccceEEEEccCCC-CCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-----ETFTRISGYCEQNDI-HSP 774 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~-~~~ 774 (1245)
+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|+.. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 4699999999999999999999999999999999998654 48999999987631 134567899999963 233
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000872 775 YVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 854 (1245)
Q Consensus 775 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEp 854 (1245)
..|++|++.+....+ ....++..+.++++++.+|+.+..+..+ ..||||||||++|||+|+.+|++++||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865432 2233444556889999999987766654 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 855 TSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 855 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
|+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999998777999999999985
No 145
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-34 Score=305.62 Aligned_cols=200 Identities=25% Similarity=0.343 Sum_probs=171.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.+++++|.++. +..+|+|+|+.+++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 3678888887642 14799999999999999999999999999999999998764 479999999985
Q ss_pred C----cccccceEEEEccCCCCC-CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 755 N----QETFTRISGYCEQNDIHS-PYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 755 ~----~~~~~~~~~~v~q~~~~~-~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
. ...+++.+|||+|++... ..-||.|.+.|+..-. ..+.++.+++++++++.+|+.+.++.. ...||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccC
Confidence 5 356788999999997654 4579999999986533 456667889999999999999987765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||+||.+|+.+|++|+|||||||||+.....+++.++++.++ |+|||+++|+.. .+.+..|+
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~ 208 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADR 208 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCE
Confidence 99999999999999999999999999999999999999999999877 689999999864 44555565
No 146
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=312.06 Aligned_cols=196 Identities=25% Similarity=0.339 Sum_probs=163.0
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 46777776552 23599999999999999999999999999999999998654 4899999998764
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000872 756 QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKR 835 (1245)
Q Consensus 756 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr 835 (1245)
. ..+.++|++|+..+++.+||.|++.+....+ .....+..++++++++.+|+.+..+..+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999998888899999998765432 1233444567899999999987666543 4699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 836 LTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 836 ~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. .+.+..|+
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~ 198 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATE 198 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999854 5899999999986 55566676
No 147
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-33 Score=310.15 Aligned_cols=187 Identities=25% Similarity=0.290 Sum_probs=155.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC-----CCCeeEEEEEECCeeCCc-----ccccceEEEEccCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRK-----TRGYITGNITISGYPKNQ-----ETFTRISGYCEQND 770 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~-----~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~ 770 (1245)
+.+|+|+|+++++||+++|+|+||||||||+++|+|.. + +.+|+|.++|.+... ..+++.++|++|+.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 36999999999999999999999999999999999986 4 358999999987542 23456789999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000872 771 IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 850 (1245)
Q Consensus 771 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~ 850 (1245)
.++ .+||+|++.+....+. .....+.+++++++++.+|+.+..+.... ...||||||||++||++|+.+|++|+
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~lll 164 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLL 164 (227)
T ss_pred hhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 877 7999999988654331 11222345668899999999876554321 25799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 851 MDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 851 lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+|||+.++..+.+.|++++++ +|||+++|++. .+.+..|+
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~ 209 (227)
T cd03260 165 LDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADR 209 (227)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCE
Confidence 99999999999999999999999876 99999999986 45566676
No 148
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=310.85 Aligned_cols=202 Identities=25% Similarity=0.309 Sum_probs=165.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4567777665210 0012699999999999999999999999999999999998664 4899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. ..++.++|++|++.+++.+|+.|++.+....+. .......+.++++++.+|+.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 235678999999999999999999988654431 233444566889999999987766543 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~ 210 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDR 210 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998765 899999999985 45566676
No 149
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-33 Score=306.90 Aligned_cols=201 Identities=23% Similarity=0.321 Sum_probs=162.0
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 4567777765310 0124699999999999999999999999999999999998654 4899999998764
Q ss_pred cc---c---cc-ceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000872 756 QE---T---FT-RISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGL 828 (1245)
Q Consensus 756 ~~---~---~~-~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 828 (1245)
.. . ++ +.++|++|+..+++.+|++|++.+....+. ....+..+++.++++.+|+.+..+..+ +.|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 22 568999999988889999999988654331 222334456789999999987666543 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 829 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 829 SgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||++|||+|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. .+ +..|+
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~ 210 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDR 210 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCE
Confidence 999999999999999999999999999999999999999999998754 899999999986 33 33465
No 150
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-34 Score=317.39 Aligned_cols=190 Identities=25% Similarity=0.296 Sum_probs=159.5
Q ss_pred ccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc---c----ccceEEEEccC
Q 000872 697 HDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE---T----FTRISGYCEQN 769 (1245)
Q Consensus 697 ~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q~ 769 (1245)
.++.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|+
T Consensus 33 ~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~ 110 (269)
T cd03294 33 KTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQS 110 (269)
T ss_pred hcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecC
Confidence 34556799999999999999999999999999999999998654 489999999876421 1 13568999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCee
Q 000872 770 DIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSII 849 (1245)
Q Consensus 770 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il 849 (1245)
+.+++.+||+|++.+....+ .....+.+++++++++.+||.+..++.+ +.||||||||++||++|+.+|++|
T Consensus 111 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~il 182 (269)
T cd03294 111 FALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDIL 182 (269)
T ss_pred cccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 98888999999998865433 1223444566889999999988777654 469999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 850 FMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 850 ~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 183 lLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~ 230 (269)
T cd03294 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDR 230 (269)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 999999999999999999999998754 899999999986 45566676
No 151
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-33 Score=328.26 Aligned_cols=202 Identities=25% Similarity=0.343 Sum_probs=168.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+.+++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEc
Confidence 367888887652 34699999999999999999999999999999999998664 489999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.+||++|+..+++.+||+|++.+....... .....++.+++++++++.+|+.+..+..+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 34567799999999988899999999875321110 01112334567899999999998877654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+..|+
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adr 208 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDE 208 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877899999999986 55667777
No 152
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-34 Score=326.60 Aligned_cols=197 Identities=27% Similarity=0.427 Sum_probs=161.6
Q ss_pred CeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCe
Q 000872 673 PFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGY 752 (1245)
Q Consensus 673 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~ 752 (1245)
+..++|+|+++++. +++++|+++||+|++||++||+|+|||||||++++|.+..+ .+|+|.|||.
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34699999999874 23459999999999999999999999999999999998755 3899999999
Q ss_pred eCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-------CcccccccccC
Q 000872 753 PKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVE-------LNPLRQALVGL 822 (1245)
Q Consensus 753 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-------l~~~~~~~~g~ 822 (1245)
++++ +.+|+.+||||||..++. -||.+|+.|+. ...+.++ |-++-+..| +.+-.+|.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8653 678899999999887775 59999999863 2333332 233333333 34456777887
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 823 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 823 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
.+.. |||||||||+|||++++||+|+++|||||.||++|+..+++.+++.. .|+|+|++.|+.+ +...||+.
T Consensus 484 rG~~-LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~-~~rTvI~IvH~l~--ll~~~DkI 555 (591)
T KOG0057|consen 484 RGLM-LSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM-SGRTVIMIVHRLD--LLKDFDKI 555 (591)
T ss_pred cccc-cccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc-CCCeEEEEEecch--hHhcCCEE
Confidence 6544 99999999999999999999999999999999999999999999843 5899999999874 66778873
No 153
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.1e-33 Score=302.97 Aligned_cols=176 Identities=19% Similarity=0.275 Sum_probs=136.2
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..+..+|++|.++ +.++++++++|-|.=-..+||+||||.||||||++|.|...+. .|+..-|-
T Consensus 585 PvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~--~GE~RKnh-- 648 (807)
T KOG0066|consen 585 PVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPN--DGELRKNH-- 648 (807)
T ss_pred CeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCC--cchhhccc--
Confidence 3567788887663 3457899999999999999999999999999999999987653 55543331
Q ss_pred CCcccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 754 KNQETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 754 ~~~~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
+-.+|+..|.. .+...-|+-|.|.-.. +. +. +.....|-.+||...++|+- ...||||
T Consensus 649 ------rL~iG~FdQh~~E~L~~Eetp~EyLqr~F----Nl--py----q~ARK~LG~fGL~sHAHTik----ikdLSGG 708 (807)
T KOG0066|consen 649 ------RLRIGWFDQHANEALNGEETPVEYLQRKF----NL--PY----QEARKQLGTFGLASHAHTIK----IKDLSGG 708 (807)
T ss_pred ------eeeeechhhhhHHhhccccCHHHHHHHhc----CC--Ch----HHHHHHhhhhhhhhccceEe----eeecCCc
Confidence 23477777753 2444567777764211 11 11 12356678899999988863 4579999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
||-||++|.--++.|+||+|||||+.||.++...+-+.|++. ...||+++|+.+
T Consensus 709 QKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeR 762 (807)
T KOG0066|consen 709 QKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDER 762 (807)
T ss_pred chHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccc
Confidence 999999999999999999999999999999999999999876 467999999864
No 154
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.9e-33 Score=305.59 Aligned_cols=199 Identities=24% Similarity=0.304 Sum_probs=163.0
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. +++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 46778777652 123599999999999999999999999999999999998654 4899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. .+++.++|++|+..+++..|++|++.+....+ ....++..+.++++++.+++.+..+..+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 14567899999998888899999998865433 1233444456788999999987666543 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++-+..|+
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYR 206 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998777899999999986 33344455
No 155
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.8e-33 Score=307.13 Aligned_cols=185 Identities=26% Similarity=0.406 Sum_probs=156.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCCH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
+++|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|+..+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 4699999999999999999999999999999999998654 48999999987643 2345679999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
+|++.+....+. ....+..++++++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654432 233344556889999999987766554 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 859 DARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+.+...+.+.|+++++ ++|||+++|++. .+-+..|+
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 201 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDR 201 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCE
Confidence 99999999999999875 699999999986 34455666
No 156
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=312.87 Aligned_cols=189 Identities=28% Similarity=0.328 Sum_probs=155.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc------ccccceEEEEccCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ------ETFTRISGYCEQNDIHSP 774 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~------~~~~~~~~~v~q~~~~~~ 774 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+... ...++.++|++|+..+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 4699999999999999999999999999999999998653 48999999987643 124567899999998889
Q ss_pred CCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCee
Q 000872 775 YVTVYESLLYSAWLRL-----SSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSII 849 (1245)
Q Consensus 775 ~ltv~e~l~~~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il 849 (1245)
.+||+|++.+...... .........+++++++++.+++.+..+.. ...||||||||++||++|+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532110 00111223445678899999998766554 3469999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 850 FMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 850 ~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+..|+
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~ 214 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADR 214 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999998754 899999999986 45556666
No 157
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.9e-34 Score=273.63 Aligned_cols=187 Identities=27% Similarity=0.384 Sum_probs=158.4
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-------ccccceEEEEccCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-------ETFTRISGYCEQNDI 771 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~ 771 (1245)
....||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++... ....+.+|+|+|.-.
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 445799999999999999999999999999999999997654 48999999987532 123467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 772 HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 772 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
+.|++|..||+.....++... ..+..+...+.++.+||.+-.+.+. ..|||||+|||+||||+...|+|||-
T Consensus 99 Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 999999999999888887532 2333445678899999998776654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||-+||.+|...|.+.|-.+.+ .|.|.|+++|+|+- -...|+
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~L--A~Rc~R 215 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQL--AARCDR 215 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHH--HHhhhh
Confidence 999999999999999999987754 59999999999963 344444
No 158
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-33 Score=306.50 Aligned_cols=186 Identities=28% Similarity=0.374 Sum_probs=154.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCC-CCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDI-HSPYV 776 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 776 (1245)
+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.+||.+... ..+++.++|++|+.. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 4699999999999999999999999999999999998654 48999999987642 234567899999974 36678
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000872 777 TVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 856 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTs 856 (1245)
|++|++.+....+ .....+.++.++++++.+|+.+..+..+ +.||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765432 1223344456789999999987666543 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 857 GLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 857 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~ 203 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADR 203 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999998877999999999975 44444554
No 159
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3e-33 Score=300.89 Aligned_cols=187 Identities=23% Similarity=0.330 Sum_probs=158.1
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. .+.+|+|+|+.+++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 45677776542 23599999999999999999999999999999999998664 4899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 756 Q--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 756 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..+++++++++.+|+.+..++.+ +.||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999988889999999987654321 1 22356789999999987666543 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
||++||++|+++|++++|||||+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 190 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL 190 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh
Confidence 9999999999999999999999999999999999999998777899999999975
No 160
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.3e-33 Score=311.15 Aligned_cols=199 Identities=25% Similarity=0.343 Sum_probs=164.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67788877652 23599999999999999999999999999999999998654 4899999998754
Q ss_pred c-----------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000872 756 Q-----------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 756 ~-----------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
. ...++.++|++|+..+++..|++|++.+...... ....++..+.++++++.+|+.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235678999999988888999999987543211 123344456688999999998766554
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~ 213 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADR 213 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 3479999999999999999999999999999999999999999999998877999999999986 45556666
No 161
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2e-33 Score=303.58 Aligned_cols=178 Identities=25% Similarity=0.368 Sum_probs=153.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC---c----ccccceEEEEccCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN---Q----ETFTRISGYCEQNDIHS 773 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~---~----~~~~~~~~~v~q~~~~~ 773 (1245)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.. . ...++.++|++|+..++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 4699999999999999999999999999999999998654 4899999998743 1 12456799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeC
Q 000872 774 PYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 853 (1245)
Q Consensus 774 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDE 853 (1245)
+.+|++|++.+....+ .....+..+.++++++.+|+.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8999999998865432 2233445567889999999987766653 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 854 PTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 854 pTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
||+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~ 195 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE 195 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 99999999999999999998777899999999985
No 162
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=315.86 Aligned_cols=203 Identities=23% Similarity=0.310 Sum_probs=165.2
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+... ....+.+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 6788888776311 00124699999999999999999999999999999999998664 4899999998875
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCc
Q 000872 756 Q-----ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN--PLRQALVGLPGVNG 827 (1245)
Q Consensus 756 ~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~g~~~~~~ 827 (1245)
. ...++.+||++|++. .+...||+|++.|..... +...++..++++++++.+||. +..+.. .+.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134578999999863 334579999998865432 234555667789999999996 455544 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dr 214 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADR 214 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 45566777
No 163
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.3e-33 Score=306.79 Aligned_cols=184 Identities=29% Similarity=0.416 Sum_probs=152.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc---c-ccceEEEEccCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE---T-FTRISGYCEQNDIHSPYV 776 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~---~-~~~~~~~v~q~~~~~~~l 776 (1245)
+.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|+..+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 3699999999999999999999999999999999998654 489999999876431 1 245689999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000872 777 TVYESLLYSAWLRLSSEVNSKTREMFVEEVMELV-ELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 855 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpT 855 (1245)
|++|++.+....+. ..+..+.+.++++.+ ++.+..++. .+.||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654331 122334567778887 466555544 3469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 856 SGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 856 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADR 201 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccE
Confidence 999999999999999998777899999999985 44556666
No 164
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-33 Score=309.71 Aligned_cols=186 Identities=26% Similarity=0.362 Sum_probs=156.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVT 777 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 777 (1245)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..++ .+|+|.+||.+... ..+++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 3599999999999999999999999999999999998654 48999999987542 234567899999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000872 778 VYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP--LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 855 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpT 855 (1245)
++|++.+....+ ....++..+.++++++.+|+.+ ..+.. .+.||||||||++||++|+.+|++++|||||
T Consensus 92 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999998865443 1233444567889999999985 44543 3569999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 856 SGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 856 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~ 205 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADR 205 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999998764 899999999985 44555665
No 165
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=327.30 Aligned_cols=191 Identities=26% Similarity=0.383 Sum_probs=161.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+....
T Consensus 33 i~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~ 109 (343)
T PRK11153 33 IFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLEL 109 (343)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999999876432 135799999999999999999999987543
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+.. .. +....++++++.+||++..++.++ .||||||||++
T Consensus 110 ~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~qRv~ 150 (343)
T PRK11153 110 AGTP----------KA------------------------EIKARVTELLELVGLSDKADRYPA-----QLSGGQKQRVA 150 (343)
T ss_pred cCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHH
Confidence 2110 00 011235678899999887776554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+.+|++|||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.++||++++|++|++++.|+.+++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998753 3667888999999999999999999999999999988763
No 166
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-34 Score=278.73 Aligned_cols=190 Identities=24% Similarity=0.374 Sum_probs=162.8
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCcc
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSRY 81 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~~ 81 (1245)
++++||||||||||||+++|.++|. .|+|.+||++++.-.. .-|.|+|++.++|.+|+.||+.|+.++.+.++..
T Consensus 34 vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~ 108 (259)
T COG4525 34 VVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQ 108 (259)
T ss_pred EEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCCc--cceeEeccCccchhhHHHHHHHHHHHhcCCCHHH
Confidence 6899999999999999999999998 9999999998865332 3489999999999999999999999988753211
Q ss_pred chhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHhc
Q 000872 82 DMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLVG 161 (1245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~~ 161 (1245)
...++.+.+...||++..+..|- .||||||||+.|||||..
T Consensus 109 ----------------------------------R~~~a~q~l~~VgL~~~~~~~i~-----qLSGGmrQRvGiARALa~ 149 (259)
T COG4525 109 ----------------------------------RREIAHQMLALVGLEGAEHKYIW-----QLSGGMRQRVGIARALAV 149 (259)
T ss_pred ----------------------------------HHHHHHHHHHHhCcccccccceE-----eecchHHHHHHHHHHhhc
Confidence 12345678899999988776554 599999999999999999
Q ss_pred CCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEec--CCcEEEecChhhHHHH
Q 000872 162 PAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVS--DGQIVYQGPLEHVEQF 236 (1245)
Q Consensus 162 ~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~--~G~iv~~G~~~~~~~~ 236 (1245)
+|++|+||||+++||.-+++++.+.|-++.+. .++-+..|||+.+|+.-++++++||+ .|+|+..=+++..+.|
T Consensus 150 eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~-tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~df~rR~ 225 (259)
T COG4525 150 EPQLLLLDEPFGALDALTREQMQELLLDLWQE-TGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLDFARRY 225 (259)
T ss_pred CcceEeecCchhhHHHHHHHHHHHHHHHHHHH-hCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCCHHHHh
Confidence 99999999999999999999999999888775 46667779999999999999999997 5899987766644443
No 167
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-34 Score=307.92 Aligned_cols=185 Identities=28% Similarity=0.416 Sum_probs=153.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++....+.
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~-- 102 (213)
T cd03259 28 FLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGV-- 102 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCC--
Confidence 47999999999999999999999887 999999998875432 245799999999889999999999876432110
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
... +....++++++.+||.+..++.++ .||||||||++|||||
T Consensus 103 --------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al 145 (213)
T cd03259 103 --------PKA------------------------EIRARVRELLELVGLEGLLNRYPH-----ELSGGQQQRVALARAL 145 (213)
T ss_pred --------CHH------------------------HHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHHHHHHHHH
Confidence 000 001234568888999877766554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.++||++++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998653 3567888999999999999999999999998765
No 168
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-34 Score=309.26 Aligned_cols=190 Identities=31% Similarity=0.400 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--VPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 104 (220)
T cd03265 28 IFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVP 104 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999876432 12356999999999999999999999865432100
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.. +....++++++.+||++..++.++ .||||||||++||+|
T Consensus 105 ----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr~~la~a 145 (220)
T cd03265 105 ----------GA------------------------ERRERIDELLDFVGLLEAADRLVK-----TYSGGMRRRLEIARS 145 (220)
T ss_pred ----------HH------------------------HHHHHHHHHHHHcCCHHHhhCChh-----hCCHHHHHHHHHHHH
Confidence 00 011235678899999887776665 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
++.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++...+|++++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999999999998653 256788899999999999999999999999999887653
No 169
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-33 Score=306.40 Aligned_cols=187 Identities=27% Similarity=0.413 Sum_probs=152.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCC--CCCCH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHS--PYVTV 778 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~--~~ltv 778 (1245)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998654 4899999997653 3456789999997653 34799
Q ss_pred HHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000872 779 YESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 857 (1245)
Q Consensus 779 ~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsg 857 (1245)
+|++.+....+.. .....++.+++++++++.+|+.+..+..+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112234456889999999987666543 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 858 LDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 858 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+.++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~ 201 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDR 201 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999999999998777899999999986 44455565
No 170
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.7e-33 Score=307.72 Aligned_cols=199 Identities=21% Similarity=0.335 Sum_probs=164.3
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEI--TSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 45777776652 23599999999999999999999999999999999998653 4899999998864
Q ss_pred c-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 756 Q-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 756 ~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
. ..+++.++|++|+..+++.+||.|++.+...... .....+.++.+.++++.+|+.+..+..+ +.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 3 2345678999999988889999999987542111 1233445567889999999987666543 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++++|||||+|||..++..+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 205 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASR 205 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998777999999999986 44455666
No 171
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.8e-33 Score=311.95 Aligned_cols=202 Identities=23% Similarity=0.277 Sum_probs=161.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 45677766542 024599999999999999999999999999999999998654 4899999998754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000872 756 Q------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRL-----SSEVNSKTREMFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 756 ~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
. ..+++.++|++|+..+++.+||+|++.+...... .......+.+++++++++.+|+.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 1245679999999988899999999976421100 00111233456688999999998766654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+..|+
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~ 215 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADR 215 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 3469999999999999999999999999999999999999999999998654 899999999986 44556676
No 172
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-33 Score=322.10 Aligned_cols=191 Identities=27% Similarity=0.382 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+..
T Consensus 32 ~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~ 108 (303)
T TIGR01288 32 CFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMS 108 (303)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 999999998764322 2467999999999899999999998754322100
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.. +....++.+++.+||++..++.++ .||||||||++||+|
T Consensus 109 ----------~~------------------------~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~~qrv~la~a 149 (303)
T TIGR01288 109 ----------TR------------------------EIEAVIPSLLEFARLESKADVRVA-----LLSGGMKRRLTLARA 149 (303)
T ss_pred ----------HH------------------------HHHHHHHHHHHHCCChhHhcCchh-----hCCHHHHHHHHHHHH
Confidence 00 001224567888999888877665 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+.+|+++||||||+|||+.++..+.+.|+++++ .+++|++++|+.+++.++||++++|++|++++.|+++++.+
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999865 36678889999999999999999999999999999888743
No 173
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-33 Score=302.27 Aligned_cols=195 Identities=34% Similarity=0.472 Sum_probs=161.2
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+. ++.+|+|+|+++++| ++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCcccc
Confidence 4667776542 235999999999999 9999999999999999999998654 48999999987543
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 757 --ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 757 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
..+++.++|++|+..+++.+||.|++.+....+. ...++.++.++++++.+|+.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2345678999999999999999999988655431 223334556889999999987766554 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~ 198 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQ 198 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999875 599999999986 34455565
No 174
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.8e-34 Score=350.47 Aligned_cols=192 Identities=28% Similarity=0.431 Sum_probs=155.8
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+||+|+||||||||+|+|+|+++|. +|+|.+||.++..... ++.+|||+||+.++ +.||+||+.++...
T Consensus 502 vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~p~---- 573 (709)
T COG2274 502 VAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGNPE---- 573 (709)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCCCC----
Confidence 7999999999999999999999988 9999999999876654 68899999988755 67999999985421
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.+.++..++....+ ..| ....++..+||.+|+.+. +||||||||++||||
T Consensus 574 ---------------------~~~e~i~~A~~~ag-----~~~---fI~~lP~gy~t~v~E~G~-~LSGGQrQrlalARa 623 (709)
T COG2274 574 ---------------------ATDEEIIEAAQLAG-----AHE---FIENLPMGYDTPVGEGGA-NLSGGQRQRLALARA 623 (709)
T ss_pred ---------------------CCHHHHHHHHHHhC-----cHH---HHHhcccccccccccCCC-CCCHHHHHHHHHHHH
Confidence 11111111111111 112 233588999999997665 799999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|+||+||||||+||+.+++.+.+.|.++.+ ++|+|+++|..+ ..+.||+|+||++|+|+.+|+++++.+
T Consensus 624 Ll~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~---~~T~I~IaHRl~-ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 624 LLSKPKILLLDEATSALDPETEAIILQNLLQILQ---GRTVIIIAHRLS-TIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred hccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc---CCeEEEEEccch-HhhhccEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999999999999998753 456666777764 457789999999999999999999865
No 175
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.2e-33 Score=310.71 Aligned_cols=200 Identities=21% Similarity=0.306 Sum_probs=164.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478888887652 23599999999999999999999999999999999998654 489999999876
Q ss_pred Ccc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000872 755 NQE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGL 828 (1245)
Q Consensus 755 ~~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 828 (1245)
... ..++.++|++|+..+++.+|+.|++.+...... ....++.++.+.++++.+|+.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134568999999988889999999987543211 1223334456788999999988776654 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 829 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 829 SgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~ 213 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADH 213 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCE
Confidence 999999999999999999999999999999999999999999998765 899999999975 45556676
No 176
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=8.2e-33 Score=304.83 Aligned_cols=197 Identities=26% Similarity=0.361 Sum_probs=161.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.+||.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 45677776552 23599999999999999999999999999999999998654 4899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 756 Q--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 756 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
. ...++.++|++|+..+++.+|++|++.+.+..+ ....++..+.++++++.+|+.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 2 122356899999988888999999998765433 2233344556889999999987766554 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|++..- +..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~--~~~d~ 201 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEI--EADDR 201 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhH--hhCCE
Confidence 999999999999999999999999999999999999999875 589999999998633 23554
No 177
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.6e-33 Score=305.19 Aligned_cols=204 Identities=24% Similarity=0.286 Sum_probs=158.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+... .....+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4577887765310 0012599999999999999999999999999999999998654 4899999998764
Q ss_pred c------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000872 756 Q------ETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVN 826 (1245)
Q Consensus 756 ~------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 826 (1245)
. ..+++.++|++|+. .+.+.+||+|++.+......+. ...+..+..++++++.+++. +..+.. ..
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4567899999998765433211 11111122235788999985 444543 34
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+-+..|+
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 215 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADR 215 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCe
Confidence 69999999999999999999999999999999999999999999998765 899999999986 44445665
No 178
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=6.3e-33 Score=297.06 Aligned_cols=174 Identities=25% Similarity=0.339 Sum_probs=149.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCCH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
+.+|+|+|+.+++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (198)
T TIGR01189 13 RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELSA 90 (198)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEcccchHHhhhheEEeccCcccccCCcH
Confidence 4699999999999999999999999999999999997654 48999999987532 2345678999999888888999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
.|++.+....+. . + ++.++++++.+|+.+..++.+ ..||||||||++||++++.+|++++|||||+||
T Consensus 91 ~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 158 (198)
T TIGR01189 91 LENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTAL 158 (198)
T ss_pred HHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999987654331 1 1 235788999999987766554 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 859 DARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
|..+...+.+.|++++++|+|||+++|++.
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 159 DKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 999999999999998777999999999985
No 179
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=327.56 Aligned_cols=191 Identities=23% Similarity=0.340 Sum_probs=161.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+||+||+.++..
T Consensus 56 i~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~ 132 (400)
T PRK10070 56 IFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGME 132 (400)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999987 9999999998764322 2469999999999999999999998764
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+.. .. +....++++++.+||.+..+..+. .||||||||+
T Consensus 133 ~~~~~----------~~------------------------~~~~~~~e~L~~~gL~~~~~~~~~-----~LSgGq~QRv 173 (400)
T PRK10070 133 LAGIN----------AE------------------------ERREKALDALRQVGLENYAHSYPD-----ELSGGMRQRV 173 (400)
T ss_pred hcCCC----------HH------------------------HHHHHHHHHHHHcCCChhhhcCcc-----cCCHHHHHHH
Confidence 32210 00 011235668899999877766554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..++|++++|++|+++..|+++++
T Consensus 174 ~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l 252 (400)
T PRK10070 174 GLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEI 252 (400)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999998653 366788899999999999999999999999999998776
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 253 ~ 253 (400)
T PRK10070 253 L 253 (400)
T ss_pred H
Confidence 3
No 180
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-33 Score=324.17 Aligned_cols=191 Identities=25% Similarity=0.456 Sum_probs=160.9
Q ss_pred CCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECC
Q 000872 672 EPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISG 751 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g 751 (1245)
++.++..+|+++.++ +++++++|+|++++||+++||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 355677779988764 223799999999999999999999999999999999998764 489999999
Q ss_pred eeC---CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccC
Q 000872 752 YPK---NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLR------QALVGL 822 (1245)
Q Consensus 752 ~~~---~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~------~~~~g~ 822 (1245)
.+. +...+++.++||+|++.+++ -|++||+.++. .+ ..++.+.++++..||.+.. |+.+|+
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~----~s~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PD----ASDEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----Cc----CCHHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 44678899999999998876 59999998752 11 2234467888888887654 445554
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 823 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 823 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
+.++|||||+|||++||||+++++++++||||+|||.+|++.|++.|.++++ ++||++++|++.
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~ 516 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE 516 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH
Confidence 3578999999999999999999999999999999999999999999999986 599999999975
No 181
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-33 Score=314.48 Aligned_cols=204 Identities=25% Similarity=0.282 Sum_probs=165.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+.... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.+||.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67889988874210 0123599999999999999999999999999999999998664 4899999999763
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000872 756 Q-------ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVN 826 (1245)
Q Consensus 756 ~-------~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 826 (1245)
. ..+++.+|||+|++. .+...||+|++.|..... ..+.++..++++++++.+||. +..++. .+
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 2 234567999999852 233479999998875432 234444556789999999996 555554 34
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhhc
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+..|+.
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv 216 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQI 216 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 79999999999999999999999999999999999999999999999764 899999999986 566777873
No 182
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-33 Score=314.84 Aligned_cols=191 Identities=25% Similarity=0.361 Sum_probs=159.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.+...
T Consensus 52 ~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 128 (269)
T cd03294 52 IFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLE 128 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999987 9999999988754321 2469999999999999999999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+. ... +....++++++.+||.+..++.++ .||||||||+
T Consensus 129 ~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv 169 (269)
T cd03294 129 VQGV----------PRA------------------------EREERAAEALELVGLEGWEHKYPD-----ELSGGMQQRV 169 (269)
T ss_pred hcCC----------CHH------------------------HHHHHHHHHHHHcCCHhHhhCCcc-----cCCHHHHHHH
Confidence 2210 000 001234668889999887777665 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++|||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.++||++++|++|++++.|+++++
T Consensus 170 ~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 248 (269)
T cd03294 170 GLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEI 248 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998653 356788899999999999999999999999999988766
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 249 ~ 249 (269)
T cd03294 249 L 249 (269)
T ss_pred H
Confidence 3
No 183
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.8e-33 Score=310.58 Aligned_cols=199 Identities=24% Similarity=0.375 Sum_probs=159.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~ 104 (236)
T cd03219 28 IHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQART 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcc
Confidence 47999999999999999999999887 9999999988754332 2459999999999999999999998654221
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
...... .. ...+ ..+....++++++.+||++..++.++ .||||||||++||
T Consensus 105 ~~~~~~----~~---------~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la 155 (236)
T cd03219 105 GSGLLL----AR---------ARRE-----------EREARERAEELLERVGLADLADRPAG-----ELSYGQQRRLEIA 155 (236)
T ss_pred cccccc----cc---------cccc-----------HHHHHHHHHHHHHHcCccchhhCChh-----hCCHHHHHHHHHH
Confidence 000000 00 0000 00112245678899999877665554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++.++||++++|++|++++.|+++++
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRE--RGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 999999999999999999999999999999999865 356788899999999999999999999999999988765
No 184
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=307.36 Aligned_cols=199 Identities=28% Similarity=0.387 Sum_probs=164.3
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 66777776542 23699999999999999999999999999999999998654 4899999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 756 QE----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 756 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
.. ..++.++|++|++.+++.+|+.||+.+....+. ....++.+.+++++++.+|+.+..+.. .+.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 234679999999988888999999987643321 122334456788999999998765544 3479999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+..|+
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~ 206 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCER 206 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998777999999999985 55566676
No 185
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-33 Score=307.29 Aligned_cols=191 Identities=21% Similarity=0.288 Sum_probs=161.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 488999988763 23599999999999999999999999999999999998654 489999999765
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
. .+++.++|++|+..+++.+||+|++.+... . ..++++.++++.+|+.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 345678999999988888999999987421 0 12345788999999987666543 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. .+.+..|+
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~ 203 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADR 203 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999865 4899999999986 44556676
No 186
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-33 Score=310.99 Aligned_cols=200 Identities=26% Similarity=0.339 Sum_probs=165.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++ ..+.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 367888887663 123599999999999999999999999999999999998654 489999999886
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ...++.+||++|++. .++..||.|++.|..... .....+.+++++++++.+||.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 234567999999863 445689999998764322 2334445567899999999987776654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~ 207 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQ 207 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877999999999976 45566777
No 187
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-33 Score=296.48 Aligned_cols=183 Identities=30% Similarity=0.532 Sum_probs=153.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEECCee
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITISGYP 753 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~g~~ 753 (1245)
.++|+|+++.++.+ .+++.+|+|+|+.+++||++||+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999988532 13457999999999999999999999999999999999986522 458999999987
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 754 KNQ--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 754 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
... ...++.++|++|++.+++.+||+|++.+....+ .+. ....||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~-----~~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNE-----FVRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------ccc-----chhhCCHH
Confidence 643 235667999999999999999999998754211 121 23469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ ++|+|+++|+...++.+..|+
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~ 189 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDK 189 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCe
Confidence 999999999999999999999999999999999999999998765 678888888876677777776
No 188
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-33 Score=307.49 Aligned_cols=180 Identities=26% Similarity=0.408 Sum_probs=150.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~ 107 (216)
T TIGR00960 31 MVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRI 107 (216)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHh
Confidence 47999999999999999999999887 999999998775321 235799999999999999999999986543
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+.. .. +.+..++++++.+||++..+..++ +||||||||++
T Consensus 108 ~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ 148 (216)
T TIGR00960 108 IGVP----------PR------------------------DANERVSAALEKVGLEGKAHALPM-----QLSGGEQQRVA 148 (216)
T ss_pred cCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHH
Confidence 2100 00 011235668889999877766554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++ .+.++++++|+.+++..+||++++|++|++
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR--RGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999998864 356788899999999999999999999975
No 189
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-33 Score=317.15 Aligned_cols=191 Identities=27% Similarity=0.395 Sum_probs=157.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-----ccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-----PQRTAAYISQHDI-HIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++. .+...||+||+.|+...
T Consensus 35 ~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 111 (287)
T PRK13637 35 FVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPIN 111 (287)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHH
Confidence 47999999999999999999999987 999999999875432 2467999999863 34467999999986532
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc--ccccccccCccccccccccchh
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD--VCADTVVGDEMLRGISGGQRKR 152 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~~t~vg~~~~~~LSGGqrqR 152 (1245)
.+. .. .+....++++++.+||+ +..++.+ +.||||||||
T Consensus 112 ~~~----------~~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~LSgGq~qr 152 (287)
T PRK13637 112 LGL----------SE------------------------EEIENRVKRAMNIVGLDYEDYKDKSP-----FELSGGQKRR 152 (287)
T ss_pred CCC----------CH------------------------HHHHHHHHHHHHHcCCCchhhccCCc-----ccCCHHHHHH
Confidence 210 00 01122356788999997 4455444 4699999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhh
Q 000872 153 VTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 153 v~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~ 232 (1245)
++|||||+.+|++|||||||+|||+.++.++.+.|+++++. .++||++++|+.+++..+||+|++|++|++++.|++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 36788889999999999999999999999999999887
Q ss_pred HH
Q 000872 233 VE 234 (1245)
Q Consensus 233 ~~ 234 (1245)
+.
T Consensus 232 ~~ 233 (287)
T PRK13637 232 VF 233 (287)
T ss_pred HH
Confidence 63
No 190
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=309.72 Aligned_cols=194 Identities=28% Similarity=0.411 Sum_probs=158.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++........
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~ 106 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSE 106 (239)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccc
Confidence 47999999999999999999999887 9999999988654322 3569999999998889999999998653221000
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
+. ... +....++.+++.+||.+..+..++ .||||||||++|||||
T Consensus 107 ~~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al 151 (239)
T cd03296 107 RP------PEA------------------------EIRAKVHELLKLVQLDWLADRYPA-----QLSGGQRQRVALARAL 151 (239)
T ss_pred cC------CHH------------------------HHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHHHHHHHHH
Confidence 00 000 011234668888999876666554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++...||++++|++|++++.|+++++
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999999999999998753 356788899999999999999999999999999987765
No 191
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2e-33 Score=319.69 Aligned_cols=190 Identities=28% Similarity=0.430 Sum_probs=162.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.+||++|++.+++.+||+||+.+.+...+..
T Consensus 30 i~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~ 106 (301)
T TIGR03522 30 IVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMK 106 (301)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 47999999999999999999999987 999999998875422 2457999999999999999999999866543210
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
. .+....++++++.+||.+..++.++ .||||||||++||+|
T Consensus 107 ~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~la~a 147 (301)
T TIGR03522 107 G----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGYRQRVGLAQA 147 (301)
T ss_pred H----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----hCCHHHHHHHHHHHH
Confidence 0 0011235678999999988876665 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|+++||||||+|||+.++.++++.|++++. +++|++++|+.+++.++||++++|++|++++.|+.+++..
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK---DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC---CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999853 4678889999999999999999999999999999988754
No 192
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.4e-33 Score=308.68 Aligned_cols=189 Identities=23% Similarity=0.406 Sum_probs=157.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.+.....+
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG 104 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC
Confidence 47999999999999999999999987 9999999987654321 2469999999999999999999987643211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +....++++++.+||++..++.++ .||||||||++||
T Consensus 105 ~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 145 (232)
T cd03218 105 L----------SKK------------------------EREEKLEELLEEFHITHLRKSKAS-----SLSGGERRRVEIA 145 (232)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHH
Confidence 0 000 011234668888999877766554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999999999999998865 356788899999999999999999999999999987765
No 193
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.5e-33 Score=297.91 Aligned_cols=186 Identities=30% Similarity=0.410 Sum_probs=156.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|++..+. ++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPP--AAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeCc
Confidence 66788876652 23599999999999999999999999999999999997653 4899999998753
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000872 756 QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKR 835 (1245)
Q Consensus 756 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr 835 (1245)
....++.++|++|++.+++.+|+.|++.+....+. . .++.++++++.+|+.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---G----EELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22256678999999888888999999987554321 1 1234788999999987665543 4699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 836 LTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 836 ~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 188 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL 188 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 99999999999999999999999999999999999998777999999999985
No 194
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.3e-33 Score=296.98 Aligned_cols=172 Identities=28% Similarity=0.375 Sum_probs=149.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCCH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|+..+++.+|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 4699999999999999999999999999999999998654 48999999987532 3355679999999888889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
+|++.+.... . .+++++++++.+|+.+..++.+ ..||||||||++||++|+.+|++++|||||+||
T Consensus 91 ~e~l~~~~~~------~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD------H---SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc------c---cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999874311 1 2345788999999987766543 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 859 DARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
|+.+...+.+.|+++.++|+|+|+++|++.
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~ 186 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL 186 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch
Confidence 999999999999998777999999999986
No 195
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.7e-33 Score=347.78 Aligned_cols=188 Identities=28% Similarity=0.417 Sum_probs=157.9
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|++|+++. ++++|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~Y~~------------~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p--~~G~I~i~g~~ 398 (529)
T TIGR02868 333 PTLELRDLSFGYPG------------SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDP--LQGEVTLDGVS 398 (529)
T ss_pred ceEEEEEEEEecCC------------CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEE
Confidence 36999999998742 12499999999999999999999999999999999998664 48999999988
Q ss_pred CC--cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000872 754 KN--QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLPG 824 (1245)
Q Consensus 754 ~~--~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 824 (1245)
++ ...+++.++||+|++.+++. |++||+.++. ++. .+++++++++..++.+ -.||.+|..+
T Consensus 399 i~~~~~~lr~~i~~V~Q~~~lF~~-TI~eNI~~g~-----~~~----~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 399 VSSLQDELRRRISVFAQDAHLFDT-TVRDNLRLGR-----PDA----TDEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred hhhHHHHHHhheEEEccCcccccc-cHHHHHhccC-----CCC----CHHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 65 34567889999999988864 9999998741 112 2334677777777754 3477888654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQP 887 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p 887 (1245)
.+||||||||++|||||+++|+||+||||||+||++++..|++.|++.. +++|+|+++|++
T Consensus 469 -~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~-~~~TvIiItHrl 529 (529)
T TIGR02868 469 -ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL-SGKTVVVITHHL 529 (529)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 4699999999999999999999999999999999999999999999764 579999999985
No 196
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-33 Score=315.19 Aligned_cols=203 Identities=23% Similarity=0.324 Sum_probs=164.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 58899999887421 00123599999999999999999999999999999999998664 489999999875
Q ss_pred Cc-------------------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000872 755 NQ-------------------ETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN 813 (1245)
Q Consensus 755 ~~-------------------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~ 813 (1245)
.. ..+++.+|||+|++ .+++ .||+|++.|..... ..+.++..++++++++.+||.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13467799999986 3454 59999998864322 233444556788999999996
Q ss_pred -ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000872 814 -PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIF 892 (1245)
Q Consensus 814 -~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~ 892 (1245)
+..+.. ...||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 444443 3579999999999999999999999999999999999999999999998777999999999986 455
Q ss_pred HHhhh
Q 000872 893 EAFDA 897 (1245)
Q Consensus 893 ~~fd~ 897 (1245)
+..|+
T Consensus 241 ~~adr 245 (320)
T PRK13631 241 EVADE 245 (320)
T ss_pred HhCCE
Confidence 66676
No 197
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=308.59 Aligned_cols=190 Identities=27% Similarity=0.401 Sum_probs=158.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~ 109 (233)
T cd03258 33 IFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEI 109 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999987 999999999875432 145699999999999999999999886432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+. + .. +....++++++.+||++..+..+. .||||||||++
T Consensus 110 ~~~----~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 150 (233)
T cd03258 110 AGV----P------KA------------------------EIEERVLELLELVGLEDKADAYPA-----QLSGGQKQRVG 150 (233)
T ss_pred cCC----C------HH------------------------HHHHHHHHHHHHCCChhhhhcChh-----hCCHHHHHHHH
Confidence 210 0 00 001234668889999877665554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|++++|||||+|||+.++..+.+.|+++++. +++++++++|+.+++..+||++++|++|++++.|+.+++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999988653 366788899999999999999999999999999987765
No 198
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=306.14 Aligned_cols=206 Identities=23% Similarity=0.267 Sum_probs=163.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 367888877652 235999999999999999999999999999999999976431 3589999999
Q ss_pred eeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000872 752 YPKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGL 828 (1245)
Q Consensus 752 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 828 (1245)
.++.. ..+++.++|++|++.+++.+||.||+.+....+.. .....+.++.++++++.+|+.+..+... +.....|
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~L 147 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRL-DAPAGKL 147 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhh-cCCcccC
Confidence 87642 24456799999999888899999999886543211 1123344566889999999864211111 1124579
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 829 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 829 SgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||+++|++. .+.+..|+
T Consensus 148 SgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 214 (250)
T PRK14247 148 SGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDY 214 (250)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999999999864 899999999986 45566676
No 199
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=305.36 Aligned_cols=199 Identities=24% Similarity=0.318 Sum_probs=163.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEec
Confidence 367888887652 23599999999999999999999999999999999998654 489999999875
Q ss_pred Cc---------ccccceEEEEccCCCCCCCCCHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000872 755 NQ---------ETFTRISGYCEQNDIHSPYVTVYESLLYS-AWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 755 ~~---------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~-~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
.. ...++.++|++|+..+++.+|+.|++.+. ...+ +....+..+.+.+.++.+|+.+..+..+
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 139 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP---- 139 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh----
Confidence 20 12356789999999999999999999643 2222 1223344566889999999987666553
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.++|+|||+++|++. ++-+..|+
T Consensus 140 -~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~ 210 (242)
T PRK11124 140 -LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASR 210 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 469999999999999999999999999999999999999999999998777999999999986 44455666
No 200
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-33 Score=305.10 Aligned_cols=185 Identities=27% Similarity=0.402 Sum_probs=154.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|+++.. .++.++|++|++.+++.+|++||+.++....+.
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~--- 103 (220)
T cd03293 32 FVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLDNVALGLELQGV--- 103 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHHHHHHHHHHHcCC---
Confidence 47999999999999999999999887 9999999988753 345799999999888889999999886543210
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
... +....++++++.+||.+..+..++ .||||||||++|||||+
T Consensus 104 -------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~ 147 (220)
T cd03293 104 -------PKA------------------------EARERAEELLELVGLSGFENAYPH-----QLSGGMRQRVALARALA 147 (220)
T ss_pred -------CHH------------------------HHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHHHHHHHHH
Confidence 000 001235668889999877666554 59999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEec--CCcEEEecCh
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVS--DGQIVYQGPL 230 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~--~G~iv~~G~~ 230 (1245)
.+|+++||||||+|||+.++..+.+.|+++.+. .++++++++|+.+++...||++++|+ +|++++.++.
T Consensus 148 ~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 148 VDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred cCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999988543 35678889999999999999999999 7999988764
No 201
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-33 Score=312.19 Aligned_cols=203 Identities=22% Similarity=0.328 Sum_probs=165.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.+||.++
T Consensus 2 ~l~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKG--------TPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCC--------CccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 46788998887421 00123599999999999999999999999999999999998664 489999999886
Q ss_pred Cc-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000872 755 NQ-------ETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPG 824 (1245)
Q Consensus 755 ~~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 824 (1245)
.. ..+++.+||++|++ .+++ .||.|++.|..... ..+.++.+++++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 42 13567799999985 3444 59999998865332 234455566789999999996 555544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dr 215 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADE 215 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999875 4899999999986 45566776
No 202
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-32 Score=297.22 Aligned_cols=196 Identities=22% Similarity=0.281 Sum_probs=162.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-+.++|+++.+. ++.+++++|+.+++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 478888887642 23599999999999999999999999999999999998654 489999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
.....++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.+++.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543345568999999888888999999987654321 1 12345678899999987766654 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|++||++++.+|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~ 206 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTR 206 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcce
Confidence 999999999999999999999999999999999999998878999999999986 33444443
No 203
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=306.90 Aligned_cols=199 Identities=21% Similarity=0.268 Sum_probs=164.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 477888887653 23599999999999999999999999999999999998654 489999999875
Q ss_pred Cc----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCcccc-
Q 000872 755 NQ----------------ETFTRISGYCEQNDIHSPYVTVYESLLYSAW-LRLSSEVNSKTREMFVEEVMELVELNPLR- 816 (1245)
Q Consensus 755 ~~----------------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~- 816 (1245)
.. ..+++.++|++|++.+++.+|++|++.+... .. .....+.+++++++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1335678999999999999999999987542 21 123444556788999999997653
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhh
Q 000872 817 QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 896 (1245)
Q Consensus 817 ~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd 896 (1245)
+.. .+.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++-+..|
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 432 3579999999999999999999999999999999999999999999999877999999999986 4445567
Q ss_pred h
Q 000872 897 A 897 (1245)
Q Consensus 897 ~ 897 (1245)
+
T Consensus 221 ~ 221 (257)
T PRK10619 221 H 221 (257)
T ss_pred E
Confidence 6
No 204
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-33 Score=325.09 Aligned_cols=192 Identities=27% Similarity=0.431 Sum_probs=152.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
.|+|+|+||||||||+++|+|+++|+ +|+|.+||.+..+.. ++++++||+|+|.+++ .|+||||.++..-.
T Consensus 349 ~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~~~~-- 422 (559)
T COG4988 349 LTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLARPDA-- 422 (559)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccCCcC--
Confidence 37999999999999999999999987 999999998876654 5789999999988665 69999999864210
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
++.+. .+. ... ..+.+.+.-++..||.+|+.+ ++|||||+|||++||
T Consensus 423 ----------s~e~i----------~~a---l~~---------a~l~~~v~~p~GLdt~ige~G-~~LSgGQ~QRlaLAR 469 (559)
T COG4988 423 ----------SDEEI----------IAA---LDQ---------AGLLEFVPKPDGLDTVIGEGG-AGLSGGQAQRLALAR 469 (559)
T ss_pred ----------CHHHH----------HHH---HHH---------hcHHHhhcCCCcccchhccCC-CCCCHHHHHHHHHHH
Confidence 00000 000 000 001222222567799999754 579999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||+++++++++||||++||.++++.|.+.|.++++ ++|+++++|....+ ..+|+|++|++|+++++|.++++.+
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~---~ktvl~itHrl~~~-~~~D~I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAK---QKTVLVITHRLEDA-ADADRIVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh---CCeEEEEEcChHHH-hcCCEEEEecCCceeccCCHHHHhh
Confidence 99999999999999999999999999999999875 46777788887655 5579999999999999999998843
No 205
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-33 Score=303.77 Aligned_cols=183 Identities=25% Similarity=0.387 Sum_probs=153.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+|++||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~-- 101 (210)
T cd03269 28 IFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLK-- 101 (210)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCC--
Confidence 47999999999999999999999887 9999999987653 23467999999999899999999998765432110
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
.. +..+.++++++.+||++..++.++ +||||||||++||+||+
T Consensus 102 --------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~ 144 (210)
T cd03269 102 --------KE------------------------EARRRIDEWLERLELSEYANKRVE-----ELSKGNQQKVQFIAAVI 144 (210)
T ss_pred --------hH------------------------HHHHHHHHHHHHcCChHHHhCcHh-----hCCHHHHHHHHHHHHHh
Confidence 00 011235668889999877766554 59999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
.+|++++|||||+|||+.++..+.+.|+++++ .+.++++++|+.+++.+++|++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDVIRELAR--AGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998865 3567888999999999999999999999998764
No 206
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=324.78 Aligned_cols=185 Identities=25% Similarity=0.417 Sum_probs=159.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++.+||+||+.|+.+
T Consensus 26 ~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 102 (352)
T PRK11144 26 ITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA 102 (352)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh
Confidence 47999999999999999999999987 99999999886431 124679999999999999999999987532
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.. ....++++++.+||++..+..++ .||||||||+
T Consensus 103 ~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qRv 137 (352)
T PRK11144 103 KS----------------------------------------MVAQFDKIVALLGIEPLLDRYPG-----SLSGGEKQRV 137 (352)
T ss_pred hh----------------------------------------hHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHH
Confidence 00 01124668889999877776554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..+||++++|++|+++..|+++++
T Consensus 138 alaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 138 AIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999999999999999998753 356788899999999999999999999999999999887
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 217 ~ 217 (352)
T PRK11144 217 W 217 (352)
T ss_pred H
Confidence 3
No 207
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=311.37 Aligned_cols=203 Identities=26% Similarity=0.330 Sum_probs=164.9
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+... ....+.+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.+||.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 5788998877411 00113599999999999999999999999999999999998654 4899999999864
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000872 756 Q-------ETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGV 825 (1245)
Q Consensus 756 ~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 825 (1245)
. ..+++.+||++|++ .+++ .||.|++.|..... ..+.++.++++.++++.+||. +..+.. .
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23466799999986 3444 69999999875432 234455667789999999996 344443 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+.
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri 214 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYV 214 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEE
Confidence 579999999999999999999999999999999999999999999998777999999999985 555677773
No 208
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-32 Score=305.09 Aligned_cols=199 Identities=24% Similarity=0.323 Sum_probs=162.2
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECCe
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISGY 752 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g~ 752 (1245)
++++|+++.+. ++.+|+|+|+++++||++||+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 46778877652 235999999999999999999999999999999999986532 12799999998
Q ss_pred eCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000872 753 PKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN----PLRQALVGLP 823 (1245)
Q Consensus 753 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~~ 823 (1245)
+... ...++.++|++|+..+++ .|++|++.+....+. .....+.++.++++++.+|+. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999988654431 123344456788999999997 444433
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~ 212 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDR 212 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCE
Confidence 357999999999999999999999999999999999999999999999876 589999999986 45566676
No 209
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-33 Score=303.60 Aligned_cols=183 Identities=32% Similarity=0.492 Sum_probs=153.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc--ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV--PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+..
T Consensus 27 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~ 103 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIP 103 (211)
T ss_pred cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCC
Confidence 47999999999999999999999987 999999998765432 2467999999999999999999998765432100
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
. .+..+.++++++.+||++..++.++ .||||||||++||||
T Consensus 104 ----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~a 144 (211)
T cd03264 104 ----------S------------------------KEVKARVDEVLELVNLGDRAKKKIG-----SLSGGMRRRVGIAQA 144 (211)
T ss_pred ----------H------------------------HHHHHHHHHHHHHCCCHHHHhCchh-----hCCHHHHHHHHHHHH
Confidence 0 0011235668888999877776654 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
|+.+|+++||||||+|||+.++..+.+.|++++. + +++++++|+.+++.+++|++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999864 3 67888999999999999999999999998765
No 210
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2e-32 Score=300.36 Aligned_cols=202 Identities=25% Similarity=0.388 Sum_probs=164.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+... ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 47889988765310 0112599999999999999999999999999999999998654 489999999876
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 755 NQET------F-TRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 755 ~~~~------~-~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
.... . ++.++|++|+..+++.+|+.|++.+....+ .....+.+++++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 256899999998888899999998765433 1233444567899999999987666553 46
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++.. + +..|+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~ 215 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQL-A-ARCDR 215 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999998654 8999999999863 3 33554
No 211
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-33 Score=310.99 Aligned_cols=201 Identities=24% Similarity=0.300 Sum_probs=166.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+... ..+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37788998876311 123599999999999999999999999999999999998654 489999999886
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ...++.++|++|++. .++..||+|++.|..... ..+.++.+++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999973 667789999998865432 2344555667899999999988776654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + ...|+
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dr 209 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDR 209 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999865 8999999999863 3 45676
No 212
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.4e-32 Score=305.08 Aligned_cols=203 Identities=23% Similarity=0.254 Sum_probs=159.4
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.++ ++.+|+|+|+.+++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 4677776652 236999999999999999999999999999999999974212358999999987643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCc
Q 000872 757 E---T-FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSS----EVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNG 827 (1245)
Q Consensus 757 ~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~ 827 (1245)
. . .+..++|++|++.+++.+|++|++.+........ .....+..++++++++.+|+. +..+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 2 2334899999999999999999998764432110 112233346688999999997 34454322 24
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~-fd~ 897 (1245)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... .|+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~ 214 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDY 214 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCe
Confidence 9999999999999999999999999999999999999999999999777899999999985 33333 465
No 213
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=312.19 Aligned_cols=204 Identities=24% Similarity=0.297 Sum_probs=164.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.++.. ......+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~ 71 (305)
T PRK13651 2 QIKVKNIVKIFNKK--------LPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDE 71 (305)
T ss_pred EEEEEEEEEEECCC--------CCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceec
Confidence 36788998887421 01123599999999999999999999999999999999998664 379999998653
Q ss_pred C---------------------------cccccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Q 000872 755 N---------------------------QETFTRISGYCEQND-IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEV 806 (1245)
Q Consensus 755 ~---------------------------~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~ 806 (1245)
. ....++.+|||+|++ ..+...||+|++.|..... ....++.+++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~ 148 (305)
T PRK13651 72 KNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKY 148 (305)
T ss_pred ccccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHH
Confidence 1 123456799999985 3344579999998865432 23455566778999
Q ss_pred HHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000872 807 MELVELN-PLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIH 885 (1245)
Q Consensus 807 l~~l~l~-~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 885 (1245)
++.+||. +..+.. ...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|
T Consensus 149 l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtH 223 (305)
T PRK13651 149 IELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTH 223 (305)
T ss_pred HHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEee
Confidence 9999996 555544 3479999999999999999999999999999999999999999999999877999999999
Q ss_pred CCCHHHHHHhhh
Q 000872 886 QPSIDIFEAFDA 897 (1245)
Q Consensus 886 ~p~~~~~~~fd~ 897 (1245)
++. .+.+..|+
T Consensus 224 d~~-~~~~~adr 234 (305)
T PRK13651 224 DLD-NVLEWTKR 234 (305)
T ss_pred CHH-HHHHhCCE
Confidence 975 45566776
No 214
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4e-33 Score=302.71 Aligned_cols=185 Identities=29% Similarity=0.459 Sum_probs=154.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++..|++||+.++....+.
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~-- 102 (213)
T cd03301 28 FVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKV-- 102 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCC--
Confidence 47899999999999999999999887 9999999988754322 35699999999888899999999886432210
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
... +..+.++++++.+||.+..+..++ .||||||||++|||||
T Consensus 103 --------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr~~laral 145 (213)
T cd03301 103 --------PKD------------------------EIDERVREVAELLQIEHLLDRKPK-----QLSGGQRQRVALGRAI 145 (213)
T ss_pred --------CHH------------------------HHHHHHHHHHHHcCCHHHHhCChh-----hCCHHHHHHHHHHHHH
Confidence 000 011235668889999877776655 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++..+||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQR-LGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 3567788999999999999999999999999876
No 215
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.8e-33 Score=321.71 Aligned_cols=191 Identities=25% Similarity=0.334 Sum_probs=160.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCc----cCCCCcc-------cceEEEeccccccCCCCCHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGH----DMHEFVP-------QRTAAYISQHDIHIGEMTVRETLA 69 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~ 69 (1245)
+++|+|+||||||||+++|+|.++|+ +|+|+++|+ ++..... ++.++||+|++.+++.+||+||+.
T Consensus 52 i~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~ 128 (382)
T TIGR03415 52 ICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVA 128 (382)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHH
Confidence 47999999999999999999999987 999999996 3322211 246999999999999999999999
Q ss_pred HHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccccccccc
Q 000872 70 FSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1245)
++....+.. .. +.+..++++++.+||++..+..++ .|||||
T Consensus 129 ~~~~~~g~~----------~~------------------------~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq 169 (382)
T TIGR03415 129 FGLEMQGMP----------EA------------------------ERRKRVDEQLELVGLAQWADKKPG-----ELSGGM 169 (382)
T ss_pred HHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHH
Confidence 876432210 00 011235678999999887776665 599999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++|||||+.+|+||||||||+|||+.++.++.+.|+++.+. .++|+++++|+.+++.+++|+|++|++|+++..|+
T Consensus 170 ~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~-~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~ 248 (382)
T TIGR03415 170 QQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK-LNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGT 248 (382)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999998653 36778889999999999999999999999999999
Q ss_pred hhhHH
Q 000872 230 LEHVE 234 (1245)
Q Consensus 230 ~~~~~ 234 (1245)
++++.
T Consensus 249 ~~ei~ 253 (382)
T TIGR03415 249 PEEIV 253 (382)
T ss_pred HHHHh
Confidence 88764
No 216
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=319.54 Aligned_cols=188 Identities=23% Similarity=0.271 Sum_probs=160.4
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc---c----ccceEEEEccCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE---T----FTRISGYCEQNDI 771 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~---~----~~~~~~~v~q~~~ 771 (1245)
+...+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.+||.++... . .++.++|++|+..
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 344689999999999999999999999999999999998654 489999999886431 1 2356899999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 772 HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 772 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
+++.+||+||+.+....+. ...++.+++++++++.+||.+..+..+ +.||||||||++|||+|+.+|++|+|
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 234455567889999999988777654 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+|||+.++..+++.|+++.+ .|+|||+++|++. ++.+..|+
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dr 234 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDR 234 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999865 4899999999986 55667777
No 217
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-32 Score=294.20 Aligned_cols=185 Identities=24% Similarity=0.345 Sum_probs=155.9
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.+||.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNP--EKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeeEEECCCccc
Confidence 46777776652 23699999999999999999999999999999999998654 4899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000872 756 Q--ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQR 833 (1245)
Q Consensus 756 ~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGer 833 (1245)
. ..+++.++|++|+..+++..||+|++.+.... . .. +..++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~----~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--S----PG--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--C----cc--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 34567799999998888889999999876421 1 11 235788999999977655443 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 834 KRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 834 qr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
||++|||+++.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 188 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL 188 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch
Confidence 9999999999999999999999999999999999999998777999999999975
No 218
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.2e-31 Score=337.78 Aligned_cols=103 Identities=22% Similarity=0.344 Sum_probs=89.8
Q ss_pred HHHHcCCccc-ccccccCccccccccccchhhHHHHHHhcCC--cEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEE
Q 000872 123 ILKVLDLDVC-ADTVVGDEMLRGISGGQRKRVTTGEMLVGPA--HALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTAL 199 (1245)
Q Consensus 123 ~l~~lgL~~~-~~t~vg~~~~~~LSGGqrqRv~ia~al~~~p--~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~i 199 (1245)
.++.+||.+. .|..++ +|||||||||.||++|..+| ++++|||||+|||+..+..+.+.|+++++ .+.+|
T Consensus 472 ~L~~vGL~~l~l~r~~~-----~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~--~G~TV 544 (943)
T PRK00349 472 FLVDVGLDYLTLSRSAG-----TLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRD--LGNTL 544 (943)
T ss_pred HhhccccCCCCCCCchh-----hCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHh--CCCEE
Confidence 6788899764 565554 59999999999999999987 99999999999999999999999999965 36678
Q ss_pred EEecCCChhHHhhccceEEe------cCCcEEEecChhhH
Q 000872 200 ISLLQPAPEVYNLFDDIILV------SDGQIVYQGPLEHV 233 (1245)
Q Consensus 200 i~i~~~~~~~~~~~D~v~vl------~~G~iv~~G~~~~~ 233 (1245)
++++|+.+++. .||+|++| ++|++++.|+++++
T Consensus 545 IvVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv~~g~~~e~ 583 (943)
T PRK00349 545 IVVEHDEDTIR-AADYIVDIGPGAGVHGGEVVASGTPEEI 583 (943)
T ss_pred EEEeCCHHHHH-hCCEEEEeccccCCCCCEEeeccCHHHH
Confidence 88999988875 69999999 89999999987654
No 219
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=303.78 Aligned_cols=197 Identities=22% Similarity=0.341 Sum_probs=161.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. .+.+|+|+|+.++|||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 477888887652 23699999999999999999999999999999999998654 489999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCC
Q 000872 755 NQE----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELV-ELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 755 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~g~~~~~~lS 829 (1245)
... ..++.++|++|+..+++.+||.|++.+..... ..++.++.++++++.+ ++.+..+.. .+.||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 23567999999998888899999998754211 1222334567777777 466554443 34699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|+|++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADR 206 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCE
Confidence 99999999999999999999999999999999999999999998877999999999985 55566676
No 220
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-32 Score=309.71 Aligned_cols=200 Identities=26% Similarity=0.384 Sum_probs=165.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-++++|+++.+. +++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEEC
Confidence 578999988763 123599999999999999999999999999999999998654 489999999886
Q ss_pred Cc-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000872 755 NQ-----ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGL 828 (1245)
Q Consensus 755 ~~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~l 828 (1245)
.. ..+++.+||++|++. .+...|++|++.+..... +.+.++..++++++++.+||.+..+..+ +.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 31 235577999999864 334579999998764322 2334445567899999999988776653 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 829 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 829 SgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. +.+..|+
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~-~~~~~dr 211 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDI-VPLYCDN 211 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHHhCCE
Confidence 999999999999999999999999999999999999999999999765 8999999999863 4456776
No 221
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.2e-33 Score=343.15 Aligned_cols=199 Identities=28% Similarity=0.411 Sum_probs=162.1
Q ss_pred CCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECC
Q 000872 672 EPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISG 751 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g 751 (1245)
-...++++|++|.+.. ....+|+|+|++|+|||++||+|+||||||||+|+|+|...+ .+|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECC
Confidence 3457999999999853 223699999999999999999999999999999999998764 489999999
Q ss_pred eeCC---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-------Cccccccccc
Q 000872 752 YPKN---QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVE-------LNPLRQALVG 821 (1245)
Q Consensus 752 ~~~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-------l~~~~~~~~g 821 (1245)
.+.+ ...+|+.+|||+|++.++. -|++||+.++. .+.+.+ .+.++.+.-| +..-.||.+|
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhcccccccccc
Confidence 9864 4678899999999998875 59999997642 122222 1233333322 3334577777
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 822 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 822 ~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.. ..+||||||||++|||+|+++|+||+||||||+||+.++..|.+.|++.. +|+|+|+++|+++ .....|+
T Consensus 605 E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adr 676 (709)
T COG2274 605 EG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADR 676 (709)
T ss_pred cC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccE
Confidence 55 45799999999999999999999999999999999999999999999886 5899999999986 5667776
No 222
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.4e-33 Score=304.90 Aligned_cols=188 Identities=29% Similarity=0.451 Sum_probs=157.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--VPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+.....+..
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~ 106 (220)
T cd03263 30 IFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLP 106 (220)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCC
Confidence 47999999999999999999999887 99999999887432 12456999999999888999999998865432110
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.. +....++++++.+||.+..++.++ .||||||||++||||
T Consensus 107 ----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~a 147 (220)
T cd03263 107 ----------KS------------------------EIKEEVELLLRVLGLTDKANKRAR-----TLSGGMKRKLSLAIA 147 (220)
T ss_pred ----------HH------------------------HHHHHHHHHHHHcCCHHHHhChhh-----hCCHHHHHHHHHHHH
Confidence 00 001234568888999877776655 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|+.+|++++|||||+|||+.++..+.+.|+++++ + +++++++|+.+++...||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998864 3 6788899999999999999999999999999987653
No 223
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=9.4e-32 Score=350.57 Aligned_cols=117 Identities=21% Similarity=0.260 Sum_probs=91.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHh---hCCCe
Q 000872 773 SPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-RQALVGLPGVNGLSTEQRKRLTIAVELV---ANPSI 848 (1245)
Q Consensus 773 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~~~~~lSgGerqr~~ia~~l~---~~p~i 848 (1245)
+...||.|+|.++..-........++..+++ ++++.+||.+. .+.. ...||||||||++||++|+ .+|++
T Consensus 760 ~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~L 833 (1809)
T PRK00635 760 YKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPTL 833 (1809)
T ss_pred cCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCE
Confidence 4567999999886542211112233344455 47888999875 4543 3469999999999999998 59999
Q ss_pred eEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 849 IFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 849 l~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++|||||+|||..+...+++.|+++.++|.|||+++|++. .+ +..|+
T Consensus 834 LILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDr 880 (1809)
T PRK00635 834 YVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADY 880 (1809)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCE
Confidence 9999999999999999999999999888999999999986 33 77777
No 224
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2e-32 Score=304.86 Aligned_cols=198 Identities=24% Similarity=0.304 Sum_probs=163.7
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+. .+.+|+|+|++++|||+++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 4677777652 23599999999999999999999999999999999998654 48999999987632
Q ss_pred ----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000872 757 ----------------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALV 820 (1245)
Q Consensus 757 ----------------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 820 (1245)
..+++.++|++|+..+++..|+.|++.+..... ......+.++.++++++.+|+.+..+..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 144 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHMP 144 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcCh
Confidence 124567999999999999999999998754211 11233445567889999999987766543
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 821 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 821 g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 145 -----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~ 216 (252)
T TIGR03005 145 -----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADR 216 (252)
T ss_pred -----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCE
Confidence 469999999999999999999999999999999999999999999998764 899999999986 45566676
No 225
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-33 Score=315.38 Aligned_cols=202 Identities=25% Similarity=0.372 Sum_probs=161.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEecccc--ccCCCCCHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHD--IHIGEMTVRETLAFS 71 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~ 71 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .++ ..||.||+.|+
T Consensus 34 ~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~ 109 (288)
T PRK13643 34 YTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFG 109 (288)
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhH
Confidence 47999999999999999999999987 99999999987421 1245799999986 444 46999999987
Q ss_pred HhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccc
Q 000872 72 ARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1245)
....+.. .. +....+.++++.+||. +..+.. ++.||||||
T Consensus 110 ~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~-----~~~LSgGqk 150 (288)
T PRK13643 110 PQNFGIP----------KE------------------------KAEKIAAEKLEMVGLADEFWEKS-----PFELSGGQM 150 (288)
T ss_pred HHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhhccCC-----cccCCHHHH
Confidence 5432110 00 0122356788889996 344544 446999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||++|||+|+.+|+++||||||+|||+.++..+.+.|+++++ .+.||++++|+.+++..+||+|++|++|+++++|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~ 228 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTP 228 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999865 366788899999999999999999999999999999
Q ss_pred hhHH---HHHHhCCCCCCCC
Q 000872 231 EHVE---QFFISMGFKCPKR 247 (1245)
Q Consensus 231 ~~~~---~~f~~~G~~~~~~ 247 (1245)
+++. +.+...|+.+|..
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~ 248 (288)
T PRK13643 229 SDVFQEVDFLKAHELGVPKA 248 (288)
T ss_pred HHHHcCHHHHHHcCCCCChH
Confidence 8863 2234455555543
No 226
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-32 Score=309.94 Aligned_cols=204 Identities=25% Similarity=0.300 Sum_probs=164.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+... ....+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~--------~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPG--------TPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCC--------CCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 36788888766311 00124599999999999999999999999999999999998664 489999999876
Q ss_pred Cc-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000872 755 NQ-------ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGV 825 (1245)
Q Consensus 755 ~~-------~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 825 (1245)
.. ...++.++|++|++. .+..+||.|++.|....+ ....++..++++++++.+||. +..+..+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 234567899999863 233579999998765432 223445556789999999997 5656543
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++. .+.+..|+
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~ 214 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADD 214 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998777999999999976 45566676
No 227
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-32 Score=304.85 Aligned_cols=206 Identities=23% Similarity=0.243 Sum_probs=163.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.++++|+++.+. .+.+|+|+|+++++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 467888887653 235999999999999999999999999999999999986542 2489999999
Q ss_pred eeCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKN-----QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~-----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++. ...+++.++|++|++.+++.+|+.|++.+....+.. ....++.++.++++++.+|+......... ....
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 148 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLN-DYPS 148 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhc-cChh
Confidence 8764 123456799999999999999999999876543311 11233444567889999998532111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 217 (253)
T PRK14267 149 NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDY 217 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999865 699999999986 45556676
No 228
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-33 Score=277.42 Aligned_cols=198 Identities=27% Similarity=0.408 Sum_probs=162.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++.+|++|+.. .+.+|++||++++|||++||+|||||||||||++|+|...++ +|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~--~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD--SGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC--CCeEeeCCcChh
Confidence 45678888764 346999999999999999999999999999999999987643 899999999875
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCH--HHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 756 Q---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNS--KTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~--~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
. ....+..+..||+..+-...||+|-+.++.. |..... .+..+.++++|+..++.+.+... ...|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~---p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRI---PHRSGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccc---ccccCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCc
Confidence 4 3445667889999888777899999998743 332222 24455678999999999887654 346999
Q ss_pred HHHHHHHHHHHHhh------CCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~------~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||-+||.|.. ++++||||||||.||...+..++++.|+++++|..|+++.||.+-. -..-|+
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLA-A~YaDr 210 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLA-AQYADR 210 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHH-HHhhhe
Confidence 99999999999975 4569999999999999999999999999999999999999998733 234465
No 229
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.2e-33 Score=304.63 Aligned_cols=184 Identities=30% Similarity=0.450 Sum_probs=153.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--VPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+|+||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.+.....+.
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~- 108 (218)
T cd03266 33 VTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGL- 108 (218)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCC-
Confidence 47999999999999999999999887 99999999887532 1246799999999989999999999875432210
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
... +....++++++.+||++..+..++ .||||||||++||||
T Consensus 109 ---------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~lara 150 (218)
T cd03266 109 ---------KGD------------------------ELTARLEELADRLGMEELLDRRVG-----GFSTGMRQKVAIARA 150 (218)
T ss_pred ---------CHH------------------------HHHHHHHHHHHHcCCHHHHhhhhh-----hcCHHHHHHHHHHHH
Confidence 000 011235678889999877766554 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
|+.+|++++|||||+|||+.++..+.+.|+++++ .+.++++++|+.+++...+|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999864 3567888999999999999999999999998754
No 230
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.1e-33 Score=322.73 Aligned_cols=189 Identities=25% Similarity=0.468 Sum_probs=159.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.|+..
T Consensus 25 i~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~ 101 (354)
T TIGR02142 25 VTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMK 101 (354)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhh
Confidence 47999999999999999999999987 99999999887432 124679999999999999999999998643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
... .. +.+..++++++.+||++..+..+. .||||||||+
T Consensus 102 ~~~------------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGqkqRv 140 (354)
T TIGR02142 102 RAR------------PS------------------------ERRISFERVIELLGIGHLLGRLPG-----RLSGGEKQRV 140 (354)
T ss_pred ccC------------hh------------------------HHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHH
Confidence 110 00 011235678899999887776554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++|||||||+|||+.++..+.+.|+++++. .++++++++|+.+++..++|++++|++|+++..|+++++
T Consensus 141 alAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 141 AIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998753 356788899999999999999999999999999998776
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 220 ~ 220 (354)
T TIGR02142 220 W 220 (354)
T ss_pred h
Confidence 3
No 231
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-33 Score=307.83 Aligned_cols=198 Identities=27% Similarity=0.394 Sum_probs=158.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 105 (241)
T cd03256 29 FVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLG 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcc
Confidence 47999999999999999999999887 999999998875432 235699999999989999999999875321
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.. .......... + ......++++++.+||.+..++.++ .||||||||++
T Consensus 106 ~~--~~~~~~~~~~---------~---------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 154 (241)
T cd03256 106 RR--STWRSLFGLF---------P---------------KEEKQRALAALERVGLLDKAYQRAD-----QLSGGQQQRVA 154 (241)
T ss_pred cc--hhhhhhcccC---------c---------------HHHHHHHHHHHHHcCChhhhCCCcc-----cCCHHHHHHHH
Confidence 00 0000000000 0 0011235668889999876665544 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..+||++++|++|++++.|+++++
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 155 IARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 999999999999999999999999999999999998653 356788899999999999999999999999999988775
No 232
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-33 Score=301.26 Aligned_cols=177 Identities=27% Similarity=0.393 Sum_probs=147.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccc-cCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDI-HIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+|++||+.+......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~--- 101 (205)
T cd03226 28 IIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD--- 101 (205)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcC---
Confidence 47999999999999999999999987 9999999988754333467999999864 3456799999987542110
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.....++++++.+||.+..++.++ .||||||||++|||||
T Consensus 102 -----------------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral 141 (205)
T cd03226 102 -----------------------------------AGNEQAETVLKDLDLYALKERHPL-----SLSGGQKQRLAIAAAL 141 (205)
T ss_pred -----------------------------------ccHHHHHHHHHHcCCchhcCCCch-----hCCHHHHHHHHHHHHH
Confidence 001234568889999887776654 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEE
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIV 225 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv 225 (1245)
+.+|++++|||||+|||+.++..+.+.|+++++ .+.++++++|+.+++..+||++++|++|+++
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 142 LSGKDLLIFDEPTSGLDYKNMERVGELIRELAA--QGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999999999864 3567888999999999999999999999874
No 233
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-32 Score=308.73 Aligned_cols=200 Identities=27% Similarity=0.293 Sum_probs=166.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-++++|+++.+.. ..+.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 3788898877631 123599999999999999999999999999999999998664 489999999986
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ...++.++|++|+.. .++..||.||+.+..... ..+.++..++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 53 234567999999973 666789999998865433 2234455567899999999988777654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++.. + ...|+
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~ 209 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADR 209 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCE
Confidence 9999999999999999999999999999999999999999999865 8999999999864 3 34676
No 234
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=4.6e-33 Score=319.23 Aligned_cols=188 Identities=29% Similarity=0.399 Sum_probs=158.7
Q ss_pred EeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCCccc
Q 000872 4 LLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSRYD 82 (1245)
Q Consensus 4 ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~~~ 82 (1245)
|+|||||||||||++|+|..+|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.|+.+..+.
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~---~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~----- 72 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPD---SGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKV----- 72 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCC-----
Confidence 68999999999999999999987 9999999998754332 46799999999999999999999987543210
Q ss_pred hhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHhcC
Q 000872 83 MLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLVGP 162 (1245)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~~~ 162 (1245)
... +.+..++++++.+||++..+..+. .||||||||++|||||+.+
T Consensus 73 -----~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qRvalaraL~~~ 118 (325)
T TIGR01187 73 -----PRA------------------------EIKPRVLEALRLVQLEEFADRKPH-----QLSGGQQQRVALARALVFK 118 (325)
T ss_pred -----CHH------------------------HHHHHHHHHHHHcCCcchhcCChh-----hCCHHHHHHHHHHHHHHhC
Confidence 000 011235678899999877765554 5999999999999999999
Q ss_pred CcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 163 AHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 163 p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|+++||||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..+||++++|++|+++..|+++++.
T Consensus 119 p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~-~g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~ 189 (325)
T TIGR01187 119 PKILLLDEPLSALDKKLRDQMQLELKTIQEQ-LGITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIY 189 (325)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999998753 3567788999999999999999999999999999988763
No 235
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.8e-33 Score=304.26 Aligned_cols=187 Identities=23% Similarity=0.429 Sum_probs=153.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++||+.+......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~ 104 (222)
T cd03224 28 IVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR 104 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC
Confidence 47999999999999999999999987 9999999988754322 3569999999999999999999988643211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHc-CCcccccccccCccccccccccchhhHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVL-DLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
. . + ....++.+++.+ ++++..++.+. .||||||||++|
T Consensus 105 --~---------~-~------------------------~~~~~~~~l~~~~~l~~~~~~~~~-----~LS~G~~qrv~l 143 (222)
T cd03224 105 --R---------A-K------------------------RKARLERVYELFPRLKERRKQLAG-----TLSGGEQQMLAI 143 (222)
T ss_pred --c---------h-h------------------------HHHHHHHHHHHHHhhhhhhhCchh-----hCCHHHHHHHHH
Confidence 0 0 0 011123455555 46555555444 599999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||||+.+|++++|||||+|||+.++..+.+.|++++. .++++++++|+.+++...||++++|++|++++.|+.+++
T Consensus 144 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (222)
T cd03224 144 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAEL 219 (222)
T ss_pred HHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999865 356788899999999999999999999999999987765
No 236
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-32 Score=304.39 Aligned_cols=200 Identities=23% Similarity=0.281 Sum_probs=160.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 578899987753 235999999999999999999999999999999999976532 2489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN----PLRQALVGL 822 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~g~ 822 (1245)
.++.. ..+++.++|++|+..+++ +||+|++.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 234667999999987774 899999988654321 112333456678889998874 223332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 823 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 823 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|++. .+-+..|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~ 218 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDR 218 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCE
Confidence 45799999999999999999999999999999999999999999999986 4799999999986 44455666
No 237
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.8e-33 Score=300.77 Aligned_cols=180 Identities=26% Similarity=0.400 Sum_probs=151.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-cccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-VPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|..+|. +|+|.++|.++... ..++.++|++|++.+++.+||+||+.+.......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~-- 102 (208)
T cd03268 28 IYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI-- 102 (208)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC--
Confidence 47999999999999999999999887 99999999876432 1245699999999999999999999876432110
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.+..++++++.+||.+..++.++ .||||||||++||||+
T Consensus 103 ------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al 141 (208)
T cd03268 103 ------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----GFSLGMKQRLGIALAL 141 (208)
T ss_pred ------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----hCCHHHHHHHHHHHHH
Confidence 01124567888899877666554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
+.+|++++|||||+|||+.++..+.+.|+++++ .+.++++++|+.+++...+|++++|++|++++.|
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 142 LGNPDLLILDEPTNGLDPDGIKELRELILSLRD--QGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999998865 3567888999999999999999999999998765
No 238
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.5e-32 Score=302.54 Aligned_cols=200 Identities=25% Similarity=0.302 Sum_probs=162.7
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 56777776542 23599999999999999999999999999999999998654 4899999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 756 QE----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-----SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 756 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.. ..++.++|++|++.+++.+||+|++.+....... .....++.+++++++++.+|+.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 31 1234699999999999999999999886432100 00112334556899999999987766543 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 211 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADK 211 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCE
Confidence 6999999999999999999999999999999999999999999999865 799999999986 45566676
No 239
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-32 Score=307.68 Aligned_cols=198 Identities=23% Similarity=0.298 Sum_probs=163.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. +++.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECC
Confidence 45777777652 123599999999999999999999999999999999998654 4899999998864
Q ss_pred c----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 756 Q----ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 756 ~----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
. ...++.++|++|++. .+...|+.|++.+..... ..+.++.++.++++++.+|+.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999865 356689999998765432 2334445567889999999988777654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++.. + +..|+
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~-~-~~~d~ 204 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEE-L-HDADR 204 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-H-hhCCE
Confidence 99999999999999999999999999999999999999999987779999999999873 3 45666
No 240
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-32 Score=297.09 Aligned_cols=181 Identities=26% Similarity=0.321 Sum_probs=151.5
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000872 706 GVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-ETFTRISGYCEQNDIHSPYVTVYESLLY 784 (1245)
Q Consensus 706 ~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~ 784 (1245)
|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+|++|++.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 99999999999999999999999999999998654 48999999987643 2234679999999998889999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000872 785 SAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 864 (1245)
Q Consensus 785 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~ 864 (1245)
....+. . ..++.++.++++++.+|+.+..+..+ ..||||||||++||++|+.+|++++|||||+|||..++.
T Consensus 94 ~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--K-LTAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--C-ccHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 1 12234556889999999987766654 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 865 VVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 865 ~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 198 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQR 198 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCE
Confidence 999999998754 899999999985 44455665
No 241
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-32 Score=304.85 Aligned_cols=198 Identities=25% Similarity=0.355 Sum_probs=162.7
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p--~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSP--DSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEcc
Confidence 56788877652 23599999999999999999999999999999999998653 4899999998754
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 756 Q---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
. ..+++.++|++|+..+.+.+||+|++.+..... ....++.++.++++++.+|+.+..+..+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 234467899999988878899999998754321 1122333456789999999987766654 4699999
Q ss_pred HHHHHHHHHHh------hCCCeeEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAVVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~------~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. .+.+..|+
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 210 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADR 210 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCE
Confidence 99999999999 5999999999999999999999999999987 56899999999976 44556676
No 242
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.7e-32 Score=298.18 Aligned_cols=181 Identities=24% Similarity=0.360 Sum_probs=154.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYE 780 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 780 (1245)
+.+|+|+|+.+++||++||+||||||||||+++|+|..++ .+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRP--TSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 4699999999999999999999999999999999998653 4899999998765332 246899999998888899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000872 781 SLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 860 (1245)
Q Consensus 781 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~ 860 (1245)
++.+....+. .. ++.+.++++.+|+.+..+..+ ..||||||||++||++++.+|++++|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 234788899999987766543 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 861 RAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 861 ~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~ 193 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADH 193 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCE
Confidence 9999999999998777899999999986 45566676
No 243
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-32 Score=290.86 Aligned_cols=176 Identities=58% Similarity=0.928 Sum_probs=149.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+... ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 46788888876421 012469999999999999999999999999999999999743223589999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
. ..+++.++|++|++.+++.+|++|++.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 345567899999998889999999998643110 49999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|++||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++..++.+..|+
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~ 178 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDR 178 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCE
Confidence 999999999999999999999999999999999999998777899999999997656677776
No 244
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-32 Score=303.91 Aligned_cols=203 Identities=25% Similarity=0.315 Sum_probs=160.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.++++|+++.+. ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578888887652 235999999999999999999999999999999999976531 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|+..+++ +|++||+.+....+ ....++.++.++++++.+|+.+....... ...+
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 153 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLK-SPAL 153 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhc-CChh
Confidence 87532 134567999999988877 89999998875432 12333445568889999988532111111 1235
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+..|+
T Consensus 154 ~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~ 222 (258)
T PRK14268 154 SLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDY 222 (258)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 799999999976 34455565
No 245
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.1e-32 Score=311.71 Aligned_cols=214 Identities=20% Similarity=0.209 Sum_probs=168.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-++++|++..+.................+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478899988774311000000001234699999999999999999999999999999999998654 489999999986
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000872 755 NQE------TFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGV 825 (1245)
Q Consensus 755 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 825 (1245)
... .+++.++||+|+. .++|.+||.|++.+......+ ..+.++.+++++++++.+||. +..+.. .
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2456799999997 578899999999876543211 234556667788999999994 344443 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..||||||||++||++|+.+|++|++||||+|||..++..+++.|+++.++ |.|+|+++|++. .+.+..|+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dr 231 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDR 231 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999998764 899999999986 44455666
No 246
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-33 Score=306.90 Aligned_cols=190 Identities=27% Similarity=0.416 Sum_probs=156.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+.....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 105 (242)
T cd03295 29 FLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKW 105 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999887 999999998765422 245789999999999999999999886432210
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc--cccccccCccccccccccchhhHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV--CADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
. .. +....++++++.+||++ ..+.. +++||||||||++|
T Consensus 106 ----~------~~------------------------~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~l 146 (242)
T cd03295 106 ----P------KE------------------------KIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGV 146 (242)
T ss_pred ----C------HH------------------------HHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHH
Confidence 0 00 01123456888899975 44443 44699999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||||+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++...+|++++|++|++++.|+++++
T Consensus 147 aral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 223 (242)
T cd03295 147 ARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEI 223 (242)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999998653 356788899999999999999999999999999987765
No 247
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-33 Score=313.33 Aligned_cols=190 Identities=23% Similarity=0.336 Sum_probs=156.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHDI-HIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~ 72 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++. .+...||+||+.|+.
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~ 111 (290)
T PRK13634 35 YVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGP 111 (290)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHH
Confidence 47999999999999999999999987 99999999987431 12357999999862 344579999999865
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1245)
...+. ... +..+.++++++.+||. +..++.+. .|||||||
T Consensus 112 ~~~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq~q 152 (290)
T PRK13634 112 MNFGV----------SEE------------------------DAKQKAREMIELVGLPEELLARSPF-----ELSGGQMR 152 (290)
T ss_pred HHcCC----------CHH------------------------HHHHHHHHHHHHCCCChhhhhCCcc-----cCCHHHHH
Confidence 32210 000 0122456788999997 45565554 59999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++|||||+.+|+++||||||+|||+.++..+.+.|++++.. .++||++++|+.+++..+||+|++|++|++++.|+++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998653 3667888999999999999999999999999999988
Q ss_pred hH
Q 000872 232 HV 233 (1245)
Q Consensus 232 ~~ 233 (1245)
++
T Consensus 232 ~~ 233 (290)
T PRK13634 232 EI 233 (290)
T ss_pred HH
Confidence 76
No 248
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.9e-33 Score=305.84 Aligned_cols=189 Identities=22% Similarity=0.367 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCC-----CCCCceeeEEEECCccCCCCc-----ccceEEEeccccccCCCCCHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKL-----DSSLKASGKVTYNGHDMHEFV-----PQRTAAYISQHDIHIGEMTVRETLAF 70 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~~~~~~Tv~e~l~f 70 (1245)
+++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|++.++ .+||+||+.+
T Consensus 28 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~ 103 (227)
T cd03260 28 ITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAY 103 (227)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHh
Confidence 47999999999999999999999 776 999999998875432 245799999998877 8999999988
Q ss_pred HHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccc
Q 000872 71 SARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1245)
+....+.. ... +..+.++++++.+||.+..+..+. +.+||||||
T Consensus 104 ~~~~~~~~---------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~ 147 (227)
T cd03260 104 GLRLHGIK---------LKE------------------------ELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQ 147 (227)
T ss_pred HHHhcCCC---------cHH------------------------HHHHHHHHHHHHcCCChHHhccCC---cccCCHHHH
Confidence 65322100 000 011234668888999876555430 246999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ + +++++++|+.+++...||++++|++|++++.|++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 999999999999999999999999999999999999999865 3 6788899999999999999999999999999987
Q ss_pred hh
Q 000872 231 EH 232 (1245)
Q Consensus 231 ~~ 232 (1245)
++
T Consensus 225 ~~ 226 (227)
T cd03260 225 EQ 226 (227)
T ss_pred cc
Confidence 64
No 249
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-33 Score=310.40 Aligned_cols=189 Identities=23% Similarity=0.327 Sum_probs=156.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++..||+||+.|+....+
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 109 (274)
T PRK13647 33 KTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMG 109 (274)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcC
Confidence 47999999999999999999999987 9999999988754322 356999999863 4567899999998643211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. .. .+.+..++++++.+||.+..+..+. .||||||||++||
T Consensus 110 ~----------~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgG~~qrv~la 150 (274)
T PRK13647 110 L----------DK------------------------DEVERRVEEALKAVRMWDFRDKPPY-----HLSYGQKKRVAIA 150 (274)
T ss_pred C----------CH------------------------HHHHHHHHHHHHHCCCHHHhcCChh-----hCCHHHHHHHHHH
Confidence 0 00 0011235678889999877776655 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||+.+|++|||||||+|||+.++..+.+.|+++++ .+.||++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN--QGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999999999875 266788899999999999999999999999999998654
No 250
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-33 Score=318.72 Aligned_cols=191 Identities=24% Similarity=0.422 Sum_probs=154.7
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+||+|+|||||||++|+|.+..+ . +|+|.+||.++.+.. .|+.|||||||..+| +.||.+||.++..-..
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~sas-- 453 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPSAS-- 453 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCCcC--
Confidence 79999999999999999999987 4 999999999986654 467899999977755 5699999998753211
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.+.+.+.|+.. ++ .|. ...|++.++|.||+++.. |||||||||+||||
T Consensus 454 --~eeV~e~~k~a---------~~-----------------hd~---i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa 501 (591)
T KOG0057|consen 454 --DEEVVEACKRA---------GL-----------------HDV---ISRLPDGYQTLVGERGLM-LSGGEKQRVSLARA 501 (591)
T ss_pred --HHHHHHHHHHc---------Cc-----------------HHH---HHhccccchhhHhhcccc-cccchHHHHHHHHH
Confidence 12222222211 11 111 234888999999998775 99999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
+++||+|+++|||||+||.+++.++++.+.+. .+++|+|+|.|+.+ ....||+|++|++|++.+.|+++++..
T Consensus 502 ~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l~-ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 502 FLKDAPILLLDEATSALDSETEREILDMIMDV---MSGRTVIMIVHRLD-LLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HhcCCCeEEecCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecch-hHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999999999999873 34667777888875 456789999999999999999999854
No 251
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-32 Score=304.39 Aligned_cols=202 Identities=22% Similarity=0.237 Sum_probs=163.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEEC
Confidence 477888887652 23699999999999999999999999999999999998654 489999999876
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000872 755 NQE---T-FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS----------S--EVNSKTREMFVEEVMELVELNPLRQA 818 (1245)
Q Consensus 755 ~~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~ 818 (1245)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.+++.++.+|+.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 234589999999999999999999885431110 0 00112334567888999999876665
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 819 LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 819 ~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+ +.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 43 469999999999999999999999999999999999999999999998765 899999999986 45566666
No 252
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.2e-33 Score=303.71 Aligned_cols=180 Identities=26% Similarity=0.402 Sum_probs=148.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-------ccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-------PQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~ 108 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLL 108 (218)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHh
Confidence 47999999999999999999999987 999999998875432 13569999999999999999999998654
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+.. .. +....++++++.+||++..+..++ .||||||||+
T Consensus 109 ~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 149 (218)
T cd03255 109 LAGVP----------KK------------------------ERRERAEELLERVGLGDRLNHYPS-----ELSGGQQQRV 149 (218)
T ss_pred hcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhcChh-----hcCHHHHHHH
Confidence 32100 00 001235668889999876665554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++. .||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999999999999998652 3567888899988886 9999999999974
No 253
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-32 Score=281.74 Aligned_cols=197 Identities=28% Similarity=0.403 Sum_probs=156.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|++..| +..++|++||+++++||+++|+|||||||||||++|+|..+. .+|+|.++|.+++
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 5666766544 446799999999999999999999999999999999998664 3899999999976
Q ss_pred c----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCH
Q 000872 756 Q----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVE-LNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 756 ~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSg 830 (1245)
. ...++-++||||....||.|||+|||..++..+.. ++..+..++++.+.+- |.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 4 23456689999999999999999999987765432 1112222566666653 4455555544 5999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||.++|||||+++|++|+|||||.||-|.-..+|.++|+++.++ |.||+++-+. -....+.-|+
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn-~~~Al~iaDr 206 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQN-ARFALEIADR 206 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEecc-HHHHHHhhCE
Confidence 9999999999999999999999999999999999999999999866 6577776554 3344455565
No 254
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-32 Score=303.81 Aligned_cols=205 Identities=20% Similarity=0.270 Sum_probs=162.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.++++|+++.+. .+.+|+|+|++++|||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367888887753 235999999999999999999999999999999999976432 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|+..+++.+||+||+.+....+. ....++.++.++++++.+|+......... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLD-KPGG 147 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhh-CCcc
Confidence 87631 2345679999999989999999999987654331 11234445668889999998421111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~ 216 (258)
T PRK14241 148 GLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQ 216 (258)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 689999999986 44556666
No 255
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-32 Score=302.96 Aligned_cols=205 Identities=22% Similarity=0.292 Sum_probs=161.7
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeeEEEEEEC
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--R-GYITGNITIS 750 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~-~~~~G~i~~~ 750 (1245)
..++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999988763 2359999999999999999999999999999999999642 1 1258999999
Q ss_pred CeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000872 751 GYPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGV 825 (1245)
Q Consensus 751 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 825 (1245)
|.+... ..+++.++|++|+..+++ .||+|++.+....+. ....+..++.++++++.+|+.+....... ...
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLH-ESA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCc
Confidence 987642 134567999999988887 599999988754331 11223345667888999998542211221 124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++-+..|+
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~ 217 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDV 217 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCE
Confidence 5799999999999999999999999999999999999999999999985 4799999999986 44456666
No 256
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=306.33 Aligned_cols=200 Identities=24% Similarity=0.310 Sum_probs=164.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 5788998876521 124699999999999999999999999999999999998654 489999999886
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|++. .++.+|++|++.+..... ....++.++.++++++.+|+.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 235667999999964 567789999998764322 1233444567899999999988777654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ ++|||+++|++... ...|+
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~--~~~d~ 211 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEA--ILADK 211 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHH--hhCCE
Confidence 9999999999999999999999999999999999999999998766 58999999998643 34565
No 257
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.5e-32 Score=300.32 Aligned_cols=188 Identities=28% Similarity=0.375 Sum_probs=156.7
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEc-cCCCCCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCE-QNDIHSPY 775 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~-q~~~~~~~ 775 (1245)
+.+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 446799999999999999999999999999999999998654 48999999986432 23456789997 55667788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000872 776 VTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 855 (1245)
Q Consensus 776 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpT 855 (1245)
+|++|++.+....+ ....++..+.++++++.+|+.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998865543 1233344556788999999988777654 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 856 SGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 856 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||+.++..+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~ 223 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARR 223 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999998764 899999999986 44555665
No 258
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.5e-33 Score=323.05 Aligned_cols=193 Identities=25% Similarity=0.424 Sum_probs=160.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||||+|+|.++|. +|+|.++|+++.... .++.++||+|++.+++.+||+||+.++.....
T Consensus 31 iv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~- 106 (402)
T PRK09536 31 LVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHR- 106 (402)
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhc-
Confidence 47999999999999999999999987 999999999876533 24679999999998899999999987532110
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
..... .. .+....++++++.+||.+..++.+. .||||||||++|||
T Consensus 107 -~~~~~---~~-------------------------~~~~~~v~~~le~vgl~~~~~~~~~-----~LSgGerQRv~IAr 152 (402)
T PRK09536 107 -SRFDT---WT-------------------------ETDRAAVERAMERTGVAQFADRPVT-----SLSGGERQRVLLAR 152 (402)
T ss_pred -ccccC---CC-------------------------HHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHH
Confidence 00000 00 0012346778999999887776554 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||+++|++|||||||+|||+.++..+++.|+++++ .+++|++++|+.+++.++||++++|++|++++.|+++++
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~--~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev 226 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD--DGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADV 226 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999975 356788899999999999999999999999999998875
No 259
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-32 Score=304.79 Aligned_cols=201 Identities=27% Similarity=0.354 Sum_probs=163.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhH
Confidence 66788877652 24699999999999999999999999999999999997653 4899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 756 Q---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
. ..+++.++|++|+..+++.+|+.|++.+....... .....+..++.++++++.+|+.+..++.+ +.||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 23456689999998888889999999875311000 01112233456789999999987766653 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+..|+
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~ 207 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDH 207 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCE
Confidence 999999999999999999999999999999999999999998777899999999986 55667776
No 260
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-32 Score=305.68 Aligned_cols=202 Identities=28% Similarity=0.379 Sum_probs=164.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. ++.+|+|+|+.+++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEeh
Confidence 578888887652 23699999999999999999999999999999999998653 489999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|+..+++.+|+.|++.+....... ........+++++++++.+++.+..+..+ +.|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888889999999875321100 01112233456889999999987666654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~ 217 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDY 217 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998765 899999999986 55566676
No 261
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=306.54 Aligned_cols=198 Identities=26% Similarity=0.364 Sum_probs=161.1
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 46778877652 23599999999999999999999999999999999998654 4899999998863
Q ss_pred c-----ccccceEEEEccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 Q-----ETFTRISGYCEQNDIH-SPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~-----~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
. ..+++.++|++|+... ....|+.|++.+....+ +...++..+.++++++.+|+.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1335678999998653 34568999998764332 2233444456788999999987766543 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~ 205 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDA 205 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998767899999999986 44455666
No 262
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-32 Score=298.25 Aligned_cols=197 Identities=26% Similarity=0.386 Sum_probs=164.7
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
.++|+++.+. .+.+++|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 4667776552 23699999999999999999999999999999999998664 47999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000872 757 E-TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKR 835 (1245)
Q Consensus 757 ~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr 835 (1245)
. ..++.++|++|+...++.+|+.|++.+....+. ......++.++++++.+|+.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 1 235678999999988888999999988655432 223344556789999999987776654 4699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 836 LTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 836 ~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~ 200 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDR 200 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999998764 899999999985 45667776
No 263
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.4e-33 Score=316.01 Aligned_cols=193 Identities=24% Similarity=0.296 Sum_probs=158.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHD--IHIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~ 72 (1245)
+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .+++.+||.||+.+..
T Consensus 49 ~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l 125 (331)
T PRK15079 49 TLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 125 (331)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999987 999999999876532 235799999997 5888999999998865
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1245)
..... . .... +.++.++++++.+||. +..+..+ ..|||||||
T Consensus 126 ~~~~~-~-------~~~~------------------------~~~~~~~~~l~~vgl~~~~~~~~p-----~~LSgG~~Q 168 (331)
T PRK15079 126 RTYHP-K-------LSRQ------------------------EVKDRVKAMMLKVGLLPNLINRYP-----HEFSGGQCQ 168 (331)
T ss_pred HHhcc-C-------CCHH------------------------HHHHHHHHHHHHcCCChHHhcCCc-----ccCCHHHHH
Confidence 32110 0 0000 0122356788899994 3455444 469999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
||+|||||+.+|++||+||||+|||+.++.++++.|+++.+. .+.++++++|+...+..+||+|++|++|++++.|+.+
T Consensus 169 Rv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~ 247 (331)
T PRK15079 169 RIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYD 247 (331)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999999999999999999998653 3678888999999999999999999999999999988
Q ss_pred hHH
Q 000872 232 HVE 234 (1245)
Q Consensus 232 ~~~ 234 (1245)
++.
T Consensus 248 ~i~ 250 (331)
T PRK15079 248 EVY 250 (331)
T ss_pred HHH
Confidence 763
No 264
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-32 Score=305.73 Aligned_cols=199 Identities=24% Similarity=0.346 Sum_probs=164.3
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. +++.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKP--TSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 66788887652 123599999999999999999999999999999999998654 4899999998764
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 756 Q---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
. ..+++.++|++|++. .+...||.|++.+..... ....++.+++++++++.+||.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999963 334579999998765322 2334445567899999999987766654 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~dr 207 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADY 207 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998765 899999999986 55667777
No 265
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3e-32 Score=305.10 Aligned_cols=204 Identities=25% Similarity=0.323 Sum_probs=164.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEECCee
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITISGYP 753 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~g~~ 753 (1245)
-++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 467888887652 246999999999999999999999999999999999986543 236999999987
Q ss_pred CCc--------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000872 754 KNQ--------ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-----SEVNSKTREMFVEEVMELVELNPLRQALV 820 (1245)
Q Consensus 754 ~~~--------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 820 (1245)
... ...++.++|++|+..+++.+|+.|++.+......+ .....++.+++++++++.+|+.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999888999999999875321100 01112334567899999999987766543
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 821 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 821 g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. .+.+..|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~ 222 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCER 222 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 469999999999999999999999999999999999999999999998754 899999999986 34455565
No 266
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.5e-32 Score=299.14 Aligned_cols=183 Identities=25% Similarity=0.352 Sum_probs=152.6
Q ss_pred eeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCCCHHHHHH
Q 000872 704 LNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYVTVYESLL 783 (1245)
Q Consensus 704 L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~ 783 (1245)
|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+..... ...+|++|+..+++.+||.|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5799999999999999999999999999999998654 4899999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHH
Q 000872 784 YSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 863 (1245)
Q Consensus 784 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~ 863 (1245)
+......+ ....++.++.++++++.+|+.+..+..+ +.||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 76321111 2233444556889999999987766553 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 864 AVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 864 ~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 184 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDR 184 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 9999999998764 899999999986 45666776
No 267
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.5e-32 Score=288.73 Aligned_cols=177 Identities=49% Similarity=0.844 Sum_probs=151.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCeeEEEEEECCe
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRK--TRGYITGNITISGY 752 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~--~~~~~~G~i~~~g~ 752 (1245)
.++++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++ .+|+|.+||.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~--~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLG--VSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCC--CceEEEECCE
Confidence 578899988764210 001246999999999999999999999999999999999986 43 5899999999
Q ss_pred eCCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 753 PKNQETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 753 ~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8765455677999999998888999999997643110 499999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++|||+|+.+|++++|||||+|||..++..+.+.|+++.++|+|||+++|++..++.+..|+
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~ 181 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDK 181 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCE
Confidence 99999999999999999999999999999999999999998777999999999998777777887
No 268
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-32 Score=306.80 Aligned_cols=203 Identities=25% Similarity=0.321 Sum_probs=161.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+... ....+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~~--------~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAG--------TPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCC--------CccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEc
Confidence 36788888776311 00113599999999999999999999999999999999998654 489999999876
Q ss_pred Cc-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCC
Q 000872 755 NQ-------ETFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPG 824 (1245)
Q Consensus 755 ~~-------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~ 824 (1245)
.. ..+++.++|++|+. .+++ .|++|++.+..... ....++..+.++++++.+||.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN----- 142 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 42 23456789999986 3444 69999998765332 1233444556788999999963 44443
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~ 214 (280)
T PRK13649 143 PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADF 214 (280)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCE
Confidence 3469999999999999999999999999999999999999999999998777899999999985 44555676
No 269
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-32 Score=302.76 Aligned_cols=206 Identities=20% Similarity=0.266 Sum_probs=162.5
Q ss_pred CeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeeEEEEEE
Q 000872 673 PFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--R-GYITGNITI 749 (1245)
Q Consensus 673 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~-~~~~G~i~~ 749 (1245)
...++++|+++.+. .+.+|+|+|++|++||++||+||||||||||+++|+|... + .+.+|+|.+
T Consensus 11 ~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~ 77 (260)
T PRK10744 11 PSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILL 77 (260)
T ss_pred CceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEE
Confidence 34688999988763 2359999999999999999999999999999999999754 1 135899999
Q ss_pred CCeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000872 750 SGYPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 750 ~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
+|.+... ..+++.++|++|+..+++ .|++|++.+....+. ..+.++.+++++++++.+++.+....... ..
T Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 153 (260)
T PRK10744 78 DGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLH-QS 153 (260)
T ss_pred CCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHh-cC
Confidence 9987632 234567999999988777 899999987653321 12334445668899999998431111111 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++. +++|||+++|++. .+.+..|+
T Consensus 154 ~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~ 224 (260)
T PRK10744 154 GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDY 224 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 35799999999999999999999999999999999999999999999986 4789999999985 44556666
No 270
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-32 Score=308.82 Aligned_cols=192 Identities=21% Similarity=0.371 Sum_probs=158.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||.||+.+....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~ 111 (269)
T PRK11831 35 ITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLRE 111 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998775422 235699999999989999999999875421
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.. . . ... +....++.+++.+||.+..+..++ .||||||||++
T Consensus 112 ~~--~-~------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qrv~ 153 (269)
T PRK11831 112 HT--Q-L------PAP------------------------LLHSTVMMKLEAVGLRGAAKLMPS-----ELSGGMARRAA 153 (269)
T ss_pred cc--C-C------CHH------------------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHH
Confidence 10 0 0 000 011234567889999887776654 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++...||++++|++|++++.|+++++.
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998653 3567888999999999999999999999999999987763
No 271
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-32 Score=300.87 Aligned_cols=204 Identities=22% Similarity=0.302 Sum_probs=160.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC---CCCeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRK---TRGYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~---~~~~~~G~i~~~g 751 (1245)
.++++|+++.+. .+.+|+|+|+.+++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887652 235999999999999999999999999999999999952 2212479999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++ .|+.|++.+....+. ....+..++.++++++.+|+.+....... ...+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988776 699999987654331 11223344567899999998643211111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+..|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~ 214 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDK 214 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCE
Confidence 799999999999999999999999999999999999999999999985 5799999999987 45566777
No 272
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=314.41 Aligned_cols=188 Identities=22% Similarity=0.397 Sum_probs=153.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------------------cccceEEEecccc--ccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------------------VPQRTAAYISQHD--IHI 59 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------------------~~~~~~~yv~Q~~--~~~ 59 (1245)
+++|+|+||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .++
T Consensus 54 ~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~ 130 (320)
T PRK13631 54 IYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF 130 (320)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhccc
Confidence 47999999999999999999999987 99999999876432 1246799999986 345
Q ss_pred CCCCHHHHHHHHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccccc
Q 000872 60 GEMTVRETLAFSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVG 138 (1245)
Q Consensus 60 ~~~Tv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg 138 (1245)
..||+||+.|+....+. .. .+....++++++.+||+ +..+.
T Consensus 131 -~~tv~eni~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gL~~~~~~~--- 172 (320)
T PRK13631 131 -KDTIEKDIMFGPVALGV----------KK------------------------SEAKKLAKFYLNKMGLDDSYLER--- 172 (320)
T ss_pred -cchHHHHHHhhHHhcCC----------CH------------------------HHHHHHHHHHHHHcCCChhHhcC---
Confidence 46999999886432110 00 00112356688889996 34443
Q ss_pred CccccccccccchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEE
Q 000872 139 DEMLRGISGGQRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIIL 218 (1245)
Q Consensus 139 ~~~~~~LSGGqrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~v 218 (1245)
.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++. .++||++++|+.+++...||++++
T Consensus 173 --~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 173 --SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred --CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEE
Confidence 3446999999999999999999999999999999999999999999998864 366788899999999999999999
Q ss_pred ecCCcEEEecChhhH
Q 000872 219 VSDGQIVYQGPLEHV 233 (1245)
Q Consensus 219 l~~G~iv~~G~~~~~ 233 (1245)
|++|++++.|+++++
T Consensus 249 l~~G~i~~~g~~~~~ 263 (320)
T PRK13631 249 MDKGKILKTGTPYEI 263 (320)
T ss_pred EECCEEEEeCCHHHH
Confidence 999999999998876
No 273
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=302.49 Aligned_cols=186 Identities=26% Similarity=0.383 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|++||+.+...
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 37 MMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 47999999999999999999999887 9999999998754332 2469999999988999999999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.... ... +.+..++++++.+||++..++.++ +||||||||+
T Consensus 114 ~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG~~qrl 154 (233)
T PRK11629 114 IGKK----------KPA------------------------EINSRALEMLAAVGLEHRANHRPS-----ELSGGERQRV 154 (233)
T ss_pred hcCC----------CHH------------------------HHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHH
Confidence 2110 000 011235668889999876665554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
+||||++.+|+++||||||+|||+.++..+.+.|+++++. +++++++++|+.+++.. +|++++|++|++++.|+.
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 155 AIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEEEECCEEEEEecc
Confidence 9999999999999999999999999999999999988643 36678889999988776 589999999999988763
No 274
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=5.7e-32 Score=294.77 Aligned_cols=202 Identities=22% Similarity=0.339 Sum_probs=165.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+.. ..+.+.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.+||.+..
T Consensus 2 l~~~~l~~~~~~---------~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGH---------GSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSV--QEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccC---------CCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEhH
Confidence 567888876521 01125699999999999999999999999999999999997653 4899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 QE------TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. .+++.++|++|+..+++.+|+.|++.+...... ....++.++.++++++.+|+.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999988888999999988654321 1234445567899999999987766553 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+..|+
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~ 210 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADR 210 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 3356665
No 275
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=9.6e-33 Score=306.19 Aligned_cols=198 Identities=24% Similarity=0.343 Sum_probs=157.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~ 106 (243)
T TIGR02315 30 FVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLG 106 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccc
Confidence 47999999999999999999999887 999999998875422 245699999999999999999999864311
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.. .......... ..+....++++++.+||.+..+..+. .||||||||++
T Consensus 107 ~~--~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ 155 (243)
T TIGR02315 107 YK--PTWRSLLGRF------------------------SEEDKERALSALERVGLADKAYQRAD-----QLSGGQQQRVA 155 (243)
T ss_pred cc--cchhhhhccc------------------------cHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHH
Confidence 00 0000000000 00012235668888999876665544 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++.++||++++|++|++++.|+++++
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999999998653 356788899999999999999999999999999987764
No 276
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.3e-32 Score=298.17 Aligned_cols=186 Identities=29% Similarity=0.411 Sum_probs=157.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc-cccceEEEEccCCCCCCCCCHH
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE-TFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
+.+|+|+|+++.+||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+..+++.+|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 3699999999999999999999999999999999998654 489999999886432 2356799999999888899999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 859 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD 859 (1245)
|++.+....+ ........+.++++++.+++.+..+... +.||||||||++||++|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765433 1223334456789999999987666553 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 860 ARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~ 200 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADR 200 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCE
Confidence 99999999999998765 899999999985 45566676
No 277
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-32 Score=304.95 Aligned_cols=202 Identities=23% Similarity=0.289 Sum_probs=165.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++++. ++.+|+|+|++++|||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 678899988763 23599999999999999999999999999999999998654 489999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|+..+++..|++|++.+...-..+ .....+..++.++++++.+|+.+..+..+ +.|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 42 23445789999999888889999999764211100 00111233456889999999987666543 47999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~ 213 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASH 213 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998764 899999999986 56677776
No 278
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-32 Score=303.10 Aligned_cols=205 Identities=23% Similarity=0.273 Sum_probs=161.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++|+|||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 688999988763 23599999999999999999999999999999999997543 13589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|+..+++. |+.|++.+....+.. .....+.+++++++++.+|+.+....... ...+
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 2345678999999887774 999999887543311 11233345567899999999642111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+-+..|+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~ 231 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQR 231 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999865 789999999976 34455565
No 279
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.5e-32 Score=293.98 Aligned_cols=184 Identities=23% Similarity=0.285 Sum_probs=153.4
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHHHH
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-ETFTRISGYCEQNDIHSPYVTVYES 781 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~ 781 (1245)
.++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.. ...++.++|++|+..+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 46799999999999999999999999999999998664 48999999987643 2345679999999998888999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000872 782 LLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 861 (1245)
Q Consensus 782 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~ 861 (1245)
+.+....+. . ...+.+++++++++.+|+.+..+..+ +.||||||||++||++|+.+|++++|||||+|||..
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 976543211 1 11223456788999999987766653 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 862 AAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 862 ~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++..+.+.|+++.++ |+|||+++|++. ++-+..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~ 198 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQ 198 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCe
Confidence 999999999998764 899999999986 44455666
No 280
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-32 Score=344.83 Aligned_cols=195 Identities=23% Similarity=0.353 Sum_probs=160.9
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|+++.+. +++++|+|+|++++|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3689999986542 1246999999999999999999999999999999999986 4 38999999988
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~ 823 (1245)
.++ ..+++.++||+|++.++. -|++||+.++. ++.++ +.++++++..++.+ -.||.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 653 567889999999998886 59999998741 12222 34566666666543 347778765
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+ .+||||||||++|||||++||+||+||||||+||++++..|++.|+++. +++|+|+++|+++ ..+.+|+
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~ 552 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQ 552 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCE
Confidence 4 4699999999999999999999999999999999999999999999885 5899999999994 4466776
No 281
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-32 Score=302.35 Aligned_cols=190 Identities=26% Similarity=0.395 Sum_probs=156.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc--cceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP--QRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++..... .+.++|++|++.+++.+|++||+.+.......
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~- 104 (236)
T TIGR03864 29 FVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGL- 104 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCC-
Confidence 47999999999999999999999987 9999999987754321 24699999999888999999999875432210
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
... +....++++++.+||++..++.++ .||||||||++||||
T Consensus 105 ---------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~lara 146 (236)
T TIGR03864 105 ---------SRA------------------------EARERIAALLARLGLAERADDKVR-----ELNGGHRRRVEIARA 146 (236)
T ss_pred ---------CHH------------------------HHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHHH
Confidence 000 001234567888999877776655 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.. +|++++|++|++++.|+++++.
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~ 220 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELR 220 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999999999998653 35678889999988865 9999999999999999887664
No 282
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-33 Score=276.55 Aligned_cols=192 Identities=29% Similarity=0.443 Sum_probs=158.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
|++|+||||||||||||.|+|++.|+ +|++.+||.++....+ .+.-+..||+..+-+..||+|-+.++..-...
T Consensus 29 v~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~ 105 (259)
T COG4559 29 VLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS 105 (259)
T ss_pred EEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc
Confidence 57999999999999999999999988 9999999999876654 25568999999888889999999998643321
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
+.. ..+..+++++.+...++.+.+. +....|||||||||.+||
T Consensus 106 g~~--------------------------------~~e~~~i~~~ala~~d~~~la~-----R~y~~LSGGEqQRVqlAR 148 (259)
T COG4559 106 GRE--------------------------------PEEDERIAAQALAATDLSGLAG-----RDYRTLSGGEQQRVQLAR 148 (259)
T ss_pred CCC--------------------------------chhhHHHHHHHHHHcChhhhhc-----cchhhcCchHHHHHHHHH
Confidence 110 0112334566777777776554 334569999999999999
Q ss_pred HHhc------CCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 158 MLVG------PAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 158 al~~------~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
.|++ ++++|+||||||+||.....+++++.+++++. +-.|+.+.|+.+.+..+||||++|++||++..|+++
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 9975 45699999999999999999999999999974 455667889999999999999999999999999998
Q ss_pred hHH
Q 000872 232 HVE 234 (1245)
Q Consensus 232 ~~~ 234 (1245)
++.
T Consensus 227 ~vl 229 (259)
T COG4559 227 DVL 229 (259)
T ss_pred Hhc
Confidence 863
No 283
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-33 Score=314.08 Aligned_cols=190 Identities=24% Similarity=0.363 Sum_probs=154.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCC---------------------------CcccceEEEec
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHE---------------------------FVPQRTAAYIS 53 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~---------------------------~~~~~~~~yv~ 53 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+... ...++.+|||+
T Consensus 35 ~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 35 FIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 47999999999999999999999987 8999999875421 01245799999
Q ss_pred ccc-ccCCCCCHHHHHHHHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-c
Q 000872 54 QHD-IHIGEMTVRETLAFSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-V 131 (1245)
Q Consensus 54 Q~~-~~~~~~Tv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~ 131 (1245)
|++ ..+...||+||+.|+....+. .. .+..+.++++++.+||+ +
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gL~~~ 157 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGV----------SK------------------------EEAKKRAAKYIELVGLDES 157 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCC----------CH------------------------HHHHHHHHHHHHHcCCChh
Confidence 985 344567999999987543211 00 00122356788999996 4
Q ss_pred cccccccCccccccccccchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHh
Q 000872 132 CADTVVGDEMLRGISGGQRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYN 211 (1245)
Q Consensus 132 ~~~t~vg~~~~~~LSGGqrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~ 211 (1245)
..+..+ ..||||||||++||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.+|++++|+.+++.+
T Consensus 158 ~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 158 YLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK--QGKTIILVTHDLDNVLE 230 (305)
T ss_pred hhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeeCHHHHHH
Confidence 555544 46999999999999999999999999999999999999999999999864 36778889999999999
Q ss_pred hccceEEecCCcEEEecChhhHH
Q 000872 212 LFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 212 ~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
.||+|++|++|++++.|+++++.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988763
No 284
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=6.6e-32 Score=302.45 Aligned_cols=208 Identities=23% Similarity=0.300 Sum_probs=163.0
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+......+ ..+.+.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 67788887763210000 01134699999999999999999999999999999999998654 4899999998764
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000872 756 QE------TFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVN 826 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 826 (1245)
.. .+++.++|++|+. .+.+.+||+|++.+..... ......+.+++++++++.+|+. +..+.. .+
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1356799999986 4567899999997654321 1122334456688999999995 555544 34
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+..|+
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~ 220 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQR 220 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcE
Confidence 69999999999999999999999999999999999999999999998765 899999999986 44556676
No 285
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=309.20 Aligned_cols=190 Identities=20% Similarity=0.328 Sum_probs=157.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEecccc-ccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHD-IHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~-~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++ ..++..||+||+.|+....+
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 35 WLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 47999999999999999999999987 999999999875432 235799999987 36778899999998643211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +..+.++++++.+||++..+..++ .||||||||++||
T Consensus 112 ~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~qrv~lA 152 (279)
T PRK13650 112 I----------PHE------------------------EMKERVNEALELVGMQDFKEREPA-----RLSGGQKQRVAIA 152 (279)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHCCCHhHhhCCcc-----cCCHHHHHHHHHH
Confidence 0 000 011235678899999877776554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..||++++|++|+++..|+++++.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999998753 367788899999888 579999999999999999988764
No 286
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.3e-32 Score=302.74 Aligned_cols=201 Identities=28% Similarity=0.391 Sum_probs=162.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. ++.+|+|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 45677776652 24699999999999999999999999999999999998654 4899999998764
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 756 Q---ETFTRISGYCEQNDIHSPYVTVYESLLYSAW-LRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
. ...++.++|++|+...++.+||+|++.+... .+........+..++++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 2334568999999877788999999987421 110001112233456889999999987766654 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+..|+
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 206 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDH 206 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998777899999999987 55566776
No 287
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-32 Score=301.56 Aligned_cols=207 Identities=24% Similarity=0.296 Sum_probs=165.5
Q ss_pred CCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEE
Q 000872 672 EPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNIT 748 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~ 748 (1245)
.+..+.++|+++.++ .+.+|+|+|+++++||++||+|+||||||||+++|+|...+ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 344688999988762 23699999999999999999999999999999999997642 13589999
Q ss_pred ECCeeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000872 749 ISGYPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLP 823 (1245)
Q Consensus 749 ~~g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 823 (1245)
+||.+... ...++.++|++|+..+++ .||+||+.+..... .....++.+++++++++.+++.+..+...+.
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~- 159 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLHK- 159 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-
Confidence 99987642 134567999999988777 69999998764322 1123334456688899999986432222222
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|++. ++.+..|+
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~ 231 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDY 231 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCE
Confidence 245799999999999999999999999999999999999999999999985 4799999999987 56667776
No 288
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.2e-32 Score=304.60 Aligned_cols=189 Identities=21% Similarity=0.353 Sum_probs=156.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHhc-
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSARC- 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~- 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+||+.++...
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~ 105 (240)
T PRK09493 29 VVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV 105 (240)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999887 99999999887542 1245799999999989999999999875321
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+. ... +..+.++++++.+||++..+..+ +.||||||||++
T Consensus 106 ~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~ 146 (240)
T PRK09493 106 RGA----------SKE------------------------EAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVA 146 (240)
T ss_pred cCC----------CHH------------------------HHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHH
Confidence 100 000 01123466888999987666554 459999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++..+||++++|++|++++.|+.+++
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE--EGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 99999999999999999999999999999999998864 356788899999999999999999999999999988765
No 289
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-32 Score=305.98 Aligned_cols=189 Identities=21% Similarity=0.321 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-----------cccceEEEeccccccCCCCCHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-----------VPQRTAAYISQHDIHIGEMTVRETLA 69 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q~~~~~~~~Tv~e~l~ 69 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~ 107 (250)
T PRK11264 31 VVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENII 107 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHH
Confidence 47999999999999999999999887 99999999876432 12357999999998899999999998
Q ss_pred HHHhc-cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccc
Q 000872 70 FSARC-QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGG 148 (1245)
Q Consensus 70 f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 148 (1245)
++... +.. .. .+....++++++.+||++..++.++ .||||
T Consensus 108 ~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G 148 (250)
T PRK11264 108 EGPVIVKGE----------PK------------------------EEATARARELLAKVGLAGKETSYPR-----RLSGG 148 (250)
T ss_pred HHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCCcchhhCChh-----hCChH
Confidence 75321 100 00 0011234568888999876665554 59999
Q ss_pred cchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 149 QRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 149 qrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
||||++|||||+.+|+++||||||+|||+.++..+.+.|+++++ .+.++++++|+.+++.++||++++|++|++++.|
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 226 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ--EKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQG 226 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998864 3567788999999999999999999999999999
Q ss_pred ChhhH
Q 000872 229 PLEHV 233 (1245)
Q Consensus 229 ~~~~~ 233 (1245)
+.+++
T Consensus 227 ~~~~~ 231 (250)
T PRK11264 227 PAKAL 231 (250)
T ss_pred CHHHH
Confidence 88765
No 290
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-32 Score=303.87 Aligned_cols=199 Identities=28% Similarity=0.346 Sum_probs=162.9
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+. +.+.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 46788877652 123599999999999999999999999999999999998654 4899999998863
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 756 Q-----ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~-----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
. ...++.++|++|+.. .+...||.|++.+..... ....++..+++.++++.+||.+..+..+ +.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999863 334579999998754321 2234445567889999999988777654 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~ 206 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADK 206 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999998777999999999976 44556676
No 291
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.4e-32 Score=301.07 Aligned_cols=189 Identities=24% Similarity=0.332 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+.+...... ..
T Consensus 13 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~~~~~~~~-~~- 85 (230)
T TIGR01184 13 FISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIALAVDRVL-PD- 85 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHHHHHHhcc-cC-
Confidence 47999999999999999999999887 9999999988754322 24899999999999999999987532100 00
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
. ... +....++++++.+||++..++.++ .||||||||++|||||+
T Consensus 86 ~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~ 130 (230)
T TIGR01184 86 L------SKS------------------------ERRAIVEEHIALVGLTEAADKRPG-----QLSGGMKQRVAIARALS 130 (230)
T ss_pred C------CHH------------------------HHHHHHHHHHHHcCCHHHHcCChh-----hCCHHHHHHHHHHHHHH
Confidence 0 000 011234668888999877776654 59999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhh
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~ 232 (1245)
.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.+.||++++|++|++++.|+..+
T Consensus 131 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 201 (230)
T TIGR01184 131 IRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILE 201 (230)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCcee
Confidence 999999999999999999999999999988653 35678889999999999999999999999998886543
No 292
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-32 Score=298.02 Aligned_cols=185 Identities=23% Similarity=0.372 Sum_probs=153.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.++..... .
T Consensus 26 ~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~ 100 (211)
T cd03298 26 ITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--K 100 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhccccccc--C
Confidence 47999999999999999999999987 999999998875432 23579999999999999999999987532110 0
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
. .. +.+..++++++.+||++..++.+. +||||||||++|||||
T Consensus 101 -~------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ia~al 143 (211)
T cd03298 101 -L------TA-------------------------EDRQAIEVALARVGLAGLEKRLPG-----ELSGGERQRVALARVL 143 (211)
T ss_pred -c------cH-------------------------HHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHH
Confidence 0 00 001235668888999877776554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
+.+|++++|||||+|||+.++..+.+.|+++++. .+.++++++|+.+++.+.||++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998653 3567888999999999999999999999998654
No 293
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-32 Score=297.70 Aligned_cols=183 Identities=27% Similarity=0.437 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++||+.+...
T Consensus 25 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~ 101 (214)
T cd03297 25 VTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLK 101 (214)
T ss_pred eEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHh
Confidence 47999999999999999999999987 99999999876421 124579999999998989999999987542
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.. . ... .+..++++++.+||++..+..++ .||||||||+
T Consensus 102 ~~-----~-------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 140 (214)
T cd03297 102 RK-----R-------NRE------------------------DRISVDELLDLLGLDHLLNRYPA-----QLSGGEKQRV 140 (214)
T ss_pred hC-----C-------HHH------------------------HHHHHHHHHHHcCCHhHhhcCcc-----cCCHHHHHHH
Confidence 10 0 000 01234568888999876665544 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|++++.. .++++++++|+.+++...+|++++|++|++++.|
T Consensus 141 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 141 ALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999999999998653 3567888999999999999999999999998765
No 294
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.9e-32 Score=313.27 Aligned_cols=189 Identities=22% Similarity=0.300 Sum_probs=160.8
Q ss_pred cCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee----CCc---cc---c-cceEEEE
Q 000872 698 DDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP----KNQ---ET---F-TRISGYC 766 (1245)
Q Consensus 698 ~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~----~~~---~~---~-~~~~~~v 766 (1245)
++...+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+ ... .. . ++.++|+
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3456799999999999999999999999999999999998664 48999999963 211 11 1 2579999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCC
Q 000872 767 EQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANP 846 (1245)
Q Consensus 767 ~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p 846 (1245)
+|+..+++.+||+||+.|....+ ....++++++++++++.+||.+..+..+ ..||||||||++|||+|+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999876543 2344566677899999999988777654 369999999999999999999
Q ss_pred CeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 847 SIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 847 ~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+||+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~Dr 234 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNR 234 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999998764 899999999986 55667777
No 295
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.8e-33 Score=313.98 Aligned_cols=196 Identities=23% Similarity=0.346 Sum_probs=164.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++++++. ++.++|+|+|+++++||++||+|+||||||||++.|+|..++ .+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~--~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDP--QQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCC--CCCeeeECCcCh
Confidence 6899999998864 234699999999999999999999999999999999997664 489999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQA-------LVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~ 824 (1245)
.. ...+..+++++|...++. -|+|+||..+. .+ ..++.+.++++.+||.+.... .+|..
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~----AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PD----ASDEELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CC----CCHHHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 346678899999876664 59999997642 12 234557899999999876544 45544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++|||+|++|.++++|||||.|||+.|++++++.|.+.++ |+|+|++||+... .+.||+
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~~--le~~dr 541 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLRG--LERMDR 541 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEeccccc--HhhcCE
Confidence 567999999999999999999999999999999999999999999988764 8999999999763 367887
No 296
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.9e-32 Score=297.74 Aligned_cols=194 Identities=25% Similarity=0.296 Sum_probs=156.3
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECCC
Confidence 4667776542 23699999999999999999999999999999999998654 48999999987643
Q ss_pred c----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCHH
Q 000872 757 E----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVE-LNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 757 ~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~g~~~~~~lSgG 831 (1245)
. ..++.++|++|+..+++.+|+.|++.+....+. .. ..+..+++++.++ +.+..+.. .+.||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124568999999999999999999987654321 11 1233567777776 45544443 3469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~ 201 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADR 201 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998764 899999999985 44445665
No 297
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-32 Score=299.25 Aligned_cols=204 Identities=22% Similarity=0.281 Sum_probs=159.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-CeeEEEEEECCeeC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR-GYITGNITISGYPK 754 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~-~~~~G~i~~~g~~~ 754 (1245)
+.++|+++.+. .+.+|+|+|++++|||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56677777652 23599999999999999999999999999999999997532 23589999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
.. ..+++.++|++|+..+++ .|++||+.+....+... ......+++++++++.+++.+....... ...+.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567999999988887 69999998865443111 1123344567889999999532111111 123579999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+..|+
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~ 210 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADY 210 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcE
Confidence 99999999999999999999999999999999999999999864 899999999985 34455565
No 298
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-32 Score=298.35 Aligned_cols=179 Identities=28% Similarity=0.418 Sum_probs=148.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (214)
T TIGR02673 30 FLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEV 106 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999999875432 235799999999989999999999986532
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+.. .. +.+..++++++.+||++..++.+. .||||||||++
T Consensus 107 ~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~ 147 (214)
T TIGR02673 107 RGKK----------ER------------------------EIQRRVGAALRQVGLEHKADAFPE-----QLSGGEQQRVA 147 (214)
T ss_pred cCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHH
Confidence 2100 00 011234668888999876665554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCc
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQ 223 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~ 223 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++ .++++++++|+.+++..+||++++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK--RGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999999864 35678889999999999999999999985
No 299
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-32 Score=298.68 Aligned_cols=180 Identities=26% Similarity=0.405 Sum_probs=149.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~ 105 (214)
T cd03292 29 FVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEV 105 (214)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHH
Confidence 47999999999999999999999887 999999998875432 235699999999999999999999986532
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+. . .. +....++++++.+||++..++.++ +||||||||++
T Consensus 106 ~~~-~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 146 (214)
T cd03292 106 TGV-P---------PR------------------------EIRKRVPAALELVGLSHKHRALPA-----ELSGGEQQRVA 146 (214)
T ss_pred cCC-C---------HH------------------------HHHHHHHHHHHHcCCHHHhhCChh-----hcCHHHHHHHH
Confidence 210 0 00 011234568888999877766554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++ .++++++++|+.+++.++||++++|++|++
T Consensus 147 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 147 IARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK--AGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999864 356788899999999999999999999974
No 300
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=310.80 Aligned_cols=190 Identities=20% Similarity=0.289 Sum_probs=155.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEecccc--ccCCCCCHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHD--IHIGEMTVRETLAFS 71 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~ 71 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++ .+++ .||.||+.|+
T Consensus 35 ~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~ 110 (286)
T PRK13646 35 YYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFG 110 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhh
Confidence 47999999999999999999999987 99999999987532 1245799999986 3444 5999999986
Q ss_pred HhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccc
Q 000872 72 ARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1245)
....+. ... +....++++++.+||. +..++.+ +.||||||
T Consensus 111 ~~~~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~ 151 (286)
T PRK13646 111 PKNFKM----------NLD------------------------EVKNYAHRLLMDLGFSRDVMSQSP-----FQMSGGQM 151 (286)
T ss_pred HHHcCC----------CHH------------------------HHHHHHHHHHHHcCCChhhhhCCc-----ccCCHHHH
Confidence 432110 000 0112356788899996 5566544 46999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||++|||||+.+|+++||||||+|||+.++..+.+.|+++++. .++||++++|+.+++...||++++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999998653 467888899999999999999999999999999998
Q ss_pred hhHH
Q 000872 231 EHVE 234 (1245)
Q Consensus 231 ~~~~ 234 (1245)
+++.
T Consensus 231 ~~~~ 234 (286)
T PRK13646 231 KELF 234 (286)
T ss_pred HHHH
Confidence 7753
No 301
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=5e-31 Score=331.59 Aligned_cols=103 Identities=21% Similarity=0.323 Sum_probs=87.3
Q ss_pred HHHHcCCccc-ccccccCccccccccccchhhHHHHHHhcCC--cEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEE
Q 000872 123 ILKVLDLDVC-ADTVVGDEMLRGISGGQRKRVTTGEMLVGPA--HALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTAL 199 (1245)
Q Consensus 123 ~l~~lgL~~~-~~t~vg~~~~~~LSGGqrqRv~ia~al~~~p--~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~i 199 (1245)
.+..+||... .+.. +.+|||||+|||.||++|..+| +++||||||+|||+.....+.+.|+++.+ .+.+|
T Consensus 470 ~L~~vgL~~l~l~r~-----~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~--~G~TV 542 (924)
T TIGR00630 470 FLIDVGLDYLTLSRA-----AGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRD--LGNTV 542 (924)
T ss_pred hHhhccccccccCCC-----cCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHh--CCCEE
Confidence 3677788653 4443 4469999999999999999986 89999999999999999999999999965 36677
Q ss_pred EEecCCChhHHhhccceEEe------cCCcEEEecChhhH
Q 000872 200 ISLLQPAPEVYNLFDDIILV------SDGQIVYQGPLEHV 233 (1245)
Q Consensus 200 i~i~~~~~~~~~~~D~v~vl------~~G~iv~~G~~~~~ 233 (1245)
++++|+.+++. .||+|++| ++|+|++.|+++++
T Consensus 543 IvVeHd~~~i~-~aD~vi~LgpgaG~~~G~Iv~~g~~~el 581 (924)
T TIGR00630 543 IVVEHDEETIR-AADYVIDIGPGAGIHGGEVVASGTPEEI 581 (924)
T ss_pred EEEECCHHHHh-hCCEEEEecccccCCCCEEeeccCHHHH
Confidence 88899987765 89999999 89999999976654
No 302
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-32 Score=295.70 Aligned_cols=184 Identities=30% Similarity=0.408 Sum_probs=156.3
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-ccccceEEEEccCCCCCCCCCHHHH
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-ETFTRISGYCEQNDIHSPYVTVYES 781 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~ 781 (1245)
+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 79999999999999999999999999999999998654 48999999987653 2235679999999988989999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000872 782 LLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 861 (1245)
Q Consensus 782 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~ 861 (1245)
+.+..... .....+.++.+.++++.+||.+..++.+ +.||||||||++||++|+++|++++|||||+|||..
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98765332 1233444556788999999988777654 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 862 AAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 862 ~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~ 199 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADK 199 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999998764 899999999985 45556676
No 303
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-31 Score=298.84 Aligned_cols=205 Identities=22% Similarity=0.305 Sum_probs=162.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--RG-YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~~-~~~G~i~~~g 751 (1245)
.++++|+++.+. .+.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 477888887653 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|+..+++.+|++|++.+....+. .....+.+++++++++.+++......... ...+
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87632 2346779999999988998999999987543321 12233344567889999998642111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~ 216 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDY 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 55566676
No 304
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-32 Score=301.74 Aligned_cols=202 Identities=22% Similarity=0.294 Sum_probs=159.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++|++||++||+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999987763 23599999999999999999999999999999999997542 13589999999
Q ss_pred eeCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKN-----QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~-----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+.. ...+++.++|++|+..+++ .||+|++.+.+..+. .. .+.++.++++++.+++..-.+.... ....
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 153 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLN-ESGY 153 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhC-CCcc
Confidence 8753 1234567999999988887 499999988764431 11 2234556788888887531111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 154 ~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~ 222 (269)
T PRK14259 154 SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDM 222 (269)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCE
Confidence 7999999999999999999999999999999999999999999999854 799999999985 55566776
No 305
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-32 Score=330.96 Aligned_cols=204 Identities=22% Similarity=0.296 Sum_probs=167.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++++. ++.+|+|+|+++++||++||+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 377888887652 2369999999999999999999999999999999999865433589999999886
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQE----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
... ..++.++|++|+..+++.+||+|++.+....+.......++..++++++++.+|+.+..+..+ +.|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 432 124568999999988899999999988654321111123344556899999999987776654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~ 212 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDT 212 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCE
Confidence 9999999999999999999999999999999999999999999877999999999986 44455676
No 306
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-32 Score=295.09 Aligned_cols=215 Identities=27% Similarity=0.364 Sum_probs=172.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC-C-CCceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD-S-SLKASGKVTYNGHDMHEFVP-------QRTAAYISQHD--IHIGEMTVRETLA 69 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~--~~~~~~Tv~e~l~ 69 (1245)
+.+|+|+|||||||+.++|+|+++ + ....+|+|.++|+++..... .+.|+|++|++ .+-|.+||.+.+.
T Consensus 33 ~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~ 112 (316)
T COG0444 33 ILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIA 112 (316)
T ss_pred EEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHH
Confidence 469999999999999999999997 4 33568999999998754432 25799999995 6788899999988
Q ss_pred HHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccccccccc
Q 000872 70 FSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1245)
-..+.+.... ...++.+.+.++++.+||++... +-+....+|||||
T Consensus 113 E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~~--~~~~YPhelSGGM 158 (316)
T COG0444 113 EVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPER--RLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHHH--HHhhCCcccCCcH
Confidence 6654321000 01123345677899999987421 2245666899999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
||||.||.||+.+|++||.||||++||..++.+|++.|+++.++ .+++++.||||...+.++||||+||..|+|++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 99999999999999999999999999999999999999999874 57889999999999999999999999999999999
Q ss_pred hhhHHHHHHhCCCCCCCCCChhhHHHHhc
Q 000872 230 LEHVEQFFISMGFKCPKRKGIADFLQEVT 258 (1245)
Q Consensus 230 ~~~~~~~f~~~G~~~~~~~~~~~~~~~~~ 258 (1245)
.+++ +..|.|......+..+-
T Consensus 238 ~~~i--------~~~P~HPYT~~Ll~s~P 258 (316)
T COG0444 238 VEEI--------FKNPKHPYTRGLLNSLP 258 (316)
T ss_pred HHHH--------hcCCCChHHHHHHHhCc
Confidence 9887 35566666655555443
No 307
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.3e-33 Score=346.62 Aligned_cols=192 Identities=26% Similarity=0.407 Sum_probs=150.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
.++|+||||||||||+++|+|.+ |. +|+|.+||.++.+... ++.++||+|++.+| +.|++|||.++..-
T Consensus 378 ~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~TI~eNI~~g~~~--- 449 (588)
T PRK11174 378 RIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HGTLRDNVLLGNPD--- 449 (588)
T ss_pred EEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-CcCHHHHhhcCCCC---
Confidence 37999999999999999999999 77 9999999998876543 57899999998866 46999999985310
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
.+ ..+.++. .... ..++.+ -.|++..||.||+++. +||||||||++|||
T Consensus 450 ---~~----~eei~~a---------------l~~a------~l~~~i--~~lp~G~dT~vge~G~-~LSGGQrQRialAR 498 (588)
T PRK11174 450 ---AS----DEQLQQA---------------LENA------WVSEFL--PLLPQGLDTPIGDQAA-GLSVGQAQRLALAR 498 (588)
T ss_pred ---CC----HHHHHHH---------------HHHh------CHHHHH--HhcccccccccccCCC-CCCHHHHHHHHHHH
Confidence 00 0000000 0000 011111 2367788999998755 69999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||+++|+|++||||||+||+.++..+.+.|+++. +++|+++++|+.+. .+.||+|++|++|++++.|+++++.+
T Consensus 499 All~~~~IliLDE~TSaLD~~te~~i~~~l~~~~---~~~TvIiItHrl~~-i~~aD~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 499 ALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS---RRQTTLMVTHQLED-LAQWDQIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh---CCCEEEEEecChHH-HHhCCEEEEEeCCeEeecCCHHHHHh
Confidence 9999999999999999999999999999998864 24566667787755 46699999999999999999998853
No 308
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-32 Score=303.75 Aligned_cols=204 Identities=21% Similarity=0.273 Sum_probs=165.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-+.++|++++++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEec
Confidence 377889988764210 00124699999999999999999999999999999999998654 489999999886
Q ss_pred Cc----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 755 NQ----ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 755 ~~----~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
.. ...++.+||++|++. .+...|+.|++.|..... .....+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234677999999974 233468999998875432 2234455567899999999988777654 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++.. - ..|+
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~-~-~~d~ 213 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEA-V-EADR 213 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHH-h-cCCE
Confidence 99999999999999999999999999999999999999999998764 89999999999843 2 3666
No 309
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-31 Score=301.17 Aligned_cols=200 Identities=26% Similarity=0.292 Sum_probs=163.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4788999877631 113589999999999999999999999999999999998654 489999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|++. +++..|+.+++.+..... ....++..+.++++++.+|+.+..+..+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567999999974 677789999998764322 2233444566889999999987766543 47999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++... .. .|+
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~-~~-~d~ 211 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEA-ME-ADH 211 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHH-hc-CCE
Confidence 9999999999999999999999999999999999999999998764 89999999998643 33 565
No 310
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-32 Score=297.94 Aligned_cols=194 Identities=26% Similarity=0.370 Sum_probs=158.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEh
Confidence 467888887652 23599999999999999999999999999999999997654 489999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|+..+++ .|++|++.+....+ . ..+++++++++.+|+. +..+.. ...|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 42 234567999999988776 69999997653321 1 1134578899999996 444443 346999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. .+-+..|+
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~ 201 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDY 201 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999998764 899999999986 44556666
No 311
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-32 Score=282.40 Aligned_cols=192 Identities=27% Similarity=0.360 Sum_probs=165.0
Q ss_pred cCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCCCCC
Q 000872 698 DDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQNDIHS 773 (1245)
Q Consensus 698 ~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~ 773 (1245)
.+...+++|||+++++||++||+||||||||||+|+|+|..++ .+|+|.++|.+++.. ..+.-++--+|...++
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3556799999999999999999999999999999999998765 489999999987542 2234567889999999
Q ss_pred CCCCHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh
Q 000872 774 PYVTVYESLLYSAWLRL--------SSE-VNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVA 844 (1245)
Q Consensus 774 ~~ltv~e~l~~~~~lr~--------~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~ 844 (1245)
+.|||.||+..++..+. +.. ...++..++..++|+.+||.+.+|...| +||+||||||.|||||++
T Consensus 92 ~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~ 166 (250)
T COG0411 92 PGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALAT 166 (250)
T ss_pred CCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhc
Confidence 99999999998765442 111 1234556778999999999999998865 599999999999999999
Q ss_pred CCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 845 NPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 845 ~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+.. -++...|+
T Consensus 167 ~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dr 219 (250)
T COG0411 167 QPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADR 219 (250)
T ss_pred CCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccE
Confidence 99999999999999999999999999999874 699999999986 56777787
No 312
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.1e-32 Score=309.48 Aligned_cols=190 Identities=24% Similarity=0.335 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-------cccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-------VPQRTAAYISQHDI-HIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~ 72 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+..+||+||+.++.
T Consensus 35 ~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 35 FVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 47999999999999999999999987 99999999887432 12356999999862 333689999998864
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1245)
..... ... +....++++++.+||. +..++.++ .|||||||
T Consensus 112 ~~~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq~q 152 (287)
T PRK13641 112 KNFGF----------SED------------------------EAKEKALKWLKKVGLSEDLISKSPF-----ELSGGQMR 152 (287)
T ss_pred HHcCC----------CHH------------------------HHHHHHHHHHHHcCCChhHhhCCcc-----cCCHHHHH
Confidence 32110 000 0112356788899996 45565554 59999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++|||||+.+|++|||||||+|||+.++..+.+.|+++++ .+++|++++|+.+++...||++++|++|++++.|+++
T Consensus 153 rl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 153 RVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999864 3677888999999999999999999999999999988
Q ss_pred hHH
Q 000872 232 HVE 234 (1245)
Q Consensus 232 ~~~ 234 (1245)
++.
T Consensus 231 ~~~ 233 (287)
T PRK13641 231 EIF 233 (287)
T ss_pred HHh
Confidence 753
No 313
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.8e-32 Score=301.80 Aligned_cols=190 Identities=20% Similarity=0.379 Sum_probs=156.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV----PQRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.+......
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 107 (241)
T PRK10895 31 IVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD 107 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc
Confidence 47999999999999999999999887 999999998875432 23569999999998999999999987542210
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. .... +.+..++++++.+||++..+..+ +.||||||||++||
T Consensus 108 ~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la 149 (241)
T PRK10895 108 D---------LSAE------------------------QREDRANELMEEFHIEHLRDSMG-----QSLSGGERRRVEIA 149 (241)
T ss_pred c---------cCHH------------------------HHHHHHHHHHHHcCCHHHhhcch-----hhCCHHHHHHHHHH
Confidence 0 0000 01123566888899987665544 45999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||+.+|+++||||||+|||+.++..+.+.++.++. .+.++++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 224 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHH
Confidence 999999999999999999999999999999998764 356788899999999999999999999999999988765
No 314
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.98 E-value=2.3e-32 Score=302.74 Aligned_cols=180 Identities=21% Similarity=0.305 Sum_probs=151.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+||+.++.. .
T Consensus 40 ~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~enl~~~~~--~---- 108 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVIDNVGLGLK--G---- 108 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHHHHHhccc--c----
Confidence 47999999999999999999999987 9999999976532 24569999999998888999999987421 0
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
. ....++++++.+||.+..+..+ ..||||||||++|||||+
T Consensus 109 --------~--------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkqrl~laraL~ 149 (257)
T PRK11247 109 --------Q--------------------------WRDAALQALAAVGLADRANEWP-----AALSGGQKQRVALARALI 149 (257)
T ss_pred --------h--------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHh
Confidence 0 0012455788889987666554 459999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
.+|+++||||||+|||+.++..+.+.|+++.+. .+.++++++|+.+++...||++++|++|+++++|+.+
T Consensus 150 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 150 HRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999999999988653 3567788999999999999999999999999988754
No 315
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.2e-32 Score=302.46 Aligned_cols=186 Identities=26% Similarity=0.394 Sum_probs=153.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. ..+.++|++|++.+++.+||+||+.+.....+.
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~--- 100 (255)
T PRK11248 29 LLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGV--- 100 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcCC---
Confidence 47999999999999999999999887 9999999988753 234589999999989889999999875432110
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
... +....++++++.+||.+..+..++ .||||||||++|||||+
T Consensus 101 -------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qrl~laral~ 144 (255)
T PRK11248 101 -------EKM------------------------QRLEIAHQMLKKVGLEGAEKRYIW-----QLSGGQRQRVGIARALA 144 (255)
T ss_pred -------CHH------------------------HHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHHh
Confidence 000 011235678889999876665544 59999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEec--CCcEEEecChh
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVS--DGQIVYQGPLE 231 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~--~G~iv~~G~~~ 231 (1245)
.+|++|||||||+|||+.++..+.+.|+++++. .++++++++|+.+++..+||++++|+ +|+++..++.+
T Consensus 145 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 145 ANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 999999999999999999999999999988543 35678889999999999999999998 59999888653
No 316
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1e-31 Score=304.71 Aligned_cols=204 Identities=20% Similarity=0.288 Sum_probs=161.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+... ......+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKK--------TPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCC--------CccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 57889998876311 00013599999999999999999999999999999999998654 489999999875
Q ss_pred Cc--------ccccceEEEEccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000872 755 NQ--------ETFTRISGYCEQNDIH-SPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPG 824 (1245)
Q Consensus 755 ~~--------~~~~~~~~~v~q~~~~-~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~ 824 (1245)
.. ..+++.++|++|++.. ....|++|++.|....+ ....++..+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 31 2345678999998632 22469999998764322 223344445678899999994 555544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~ 220 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADE 220 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 3469999999999999999999999999999999999999999999998754 899999999986 55666776
No 317
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.98 E-value=7.4e-32 Score=301.35 Aligned_cols=203 Identities=26% Similarity=0.350 Sum_probs=161.3
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC------eeEEEEEE
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG------YITGNITI 749 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~------~~~G~i~~ 749 (1245)
++++|+++.+. ++.+|+|+|+.|++||++||+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56778876652 236999999999999999999999999999999999976532 12799999
Q ss_pred CCeeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000872 750 SGYPKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGV 825 (1245)
Q Consensus 750 ~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 825 (1245)
||.+... ..+++.++|++|++..++.+|++|++.+....+.. ......+..+.++++++.+|+.+..+.. .
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987642 23455689999998766679999999875321110 0111123445688999999998766544 3
Q ss_pred CcCCHHHHHHHHHHHHHh---------hCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHh
Q 000872 826 NGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 895 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~---------~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~f 895 (1245)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+..
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 469999999999999999 599999999999999999999999999998765 899999999986 455667
Q ss_pred hh
Q 000872 896 DA 897 (1245)
Q Consensus 896 d~ 897 (1245)
|+
T Consensus 223 d~ 224 (272)
T PRK13547 223 DR 224 (272)
T ss_pred CE
Confidence 76
No 318
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=8.3e-32 Score=281.50 Aligned_cols=149 Identities=29% Similarity=0.444 Sum_probs=133.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc--ccccceEEEEccCCCCCCCCCHH
Q 000872 702 VLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ--ETFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 702 ~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.+||.+... ..+++.++|++|+..+++..|+.
T Consensus 14 ~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 91 (173)
T cd03230 14 TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTVR 91 (173)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcccchHhhhccEEEEecCCccccCCcHH
Confidence 599999999999999999999999999999999998654 48999999987643 23456799999999888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 859 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD 859 (1245)
|++. ||||||||++|||+|+.+|++++|||||+|||
T Consensus 92 ~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~LD 127 (173)
T cd03230 92 ENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGLD 127 (173)
T ss_pred HHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCC
Confidence 9873 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 860 ARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 860 ~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.++..+.+.|++++++|.|+|+++|++. .+.+..|+
T Consensus 128 ~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~ 164 (173)
T cd03230 128 PESRREFWELLRELKKEGKTILLSSHILE-EAERLCDR 164 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCE
Confidence 99999999999999877899999999986 44455565
No 319
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=99.98 E-value=3.2e-33 Score=307.35 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=163.6
Q ss_pred cCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEE
Q 000872 669 LPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNIT 748 (1245)
Q Consensus 669 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~ 748 (1245)
+......++|+|+++.++ +++++|+||||+++||+.+|++||||+||||++++|.+.-+ ..+|.|.
T Consensus 531 l~~~~G~i~fsnvtF~Y~------------p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~ 596 (790)
T KOG0056|consen 531 LKVTQGKIEFSNVTFAYD------------PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSIT 596 (790)
T ss_pred ccccCCeEEEEEeEEecC------------CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEE
Confidence 334556899999999885 34689999999999999999999999999999999998644 3489999
Q ss_pred ECCeeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHH--HHHH-HHHcCCcccccccccC
Q 000872 749 ISGYPKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMF--VEEV-MELVELNPLRQALVGL 822 (1245)
Q Consensus 749 ~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~--v~~~-l~~l~l~~~~~~~~g~ 822 (1245)
|||++++. ..+|+.+|.||||..++. -|+..|+.|+- | +.+.++..+. ...+ -+.++..+-.+|.+|.
T Consensus 597 iDgqdIrnvt~~SLRs~IGVVPQDtvLFN-dTI~yNIryak----~-~AsneevyaAAkAA~IHdrIl~fPegY~t~VGE 670 (790)
T KOG0056|consen 597 IDGQDIRNVTQSSLRSSIGVVPQDTVLFN-DTILYNIRYAK----P-SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGE 670 (790)
T ss_pred EcCchHHHHHHHHHHHhcCcccCcceeec-ceeeeheeecC----C-CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhh
Confidence 99998753 567888999999988875 58888888752 1 2233332211 1111 1347788888999998
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 823 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 823 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
.+.+ |||||||||+|||+++++|.|++|||+||.||..+++.|+..|.++++ ++|.|+++|+.|
T Consensus 671 RGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLS 734 (790)
T KOG0056|consen 671 RGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLS 734 (790)
T ss_pred cccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeeh
Confidence 7766 999999999999999999999999999999999999999999999984 899999999987
No 320
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.5e-31 Score=305.86 Aligned_cols=205 Identities=20% Similarity=0.259 Sum_probs=163.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~~~g 751 (1245)
.+.++|+++.+.. +.+.+|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.+||
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5889999987741 123599999999999999999999999999999999997542 13489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCC-HHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVN-SKTREMFVEEVMELVELNPLRQALVGLPGV 825 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~-~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~ 825 (1245)
.++.. ..+++.++|++|++.+++ .|++||+.|..... ... .+..++.++++++.++|.+-.++.++.. .
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 98742 245678999999988775 79999998864321 122 2223445778888888854333444433 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Dr 293 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDE 293 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 57999999999999999999999999999999999999999999999875 799999999985 44455676
No 321
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.8e-31 Score=305.45 Aligned_cols=208 Identities=19% Similarity=0.232 Sum_probs=164.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-C-eeEEEEEECCee
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR-G-YITGNITISGYP 753 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~-~-~~~G~i~~~g~~ 753 (1245)
++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + ..+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888776421 1124699999999999999999999999999999999997642 2 358999999998
Q ss_pred CCcc---c----ccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000872 754 KNQE---T----FTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 754 ~~~~---~----~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
+... . +++.++|++|+. .+.|.+|+.+++........ ....++.++++.++++.+||.+..+.. . ..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l-~-~~ 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRL-D-VY 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHH-h-CC
Confidence 6431 1 224689999997 47788999988865543321 234455667789999999997532211 1 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++||+||+.+|++|++||||+|||..++..+++.|+++.+ .|.|+|+++|+.+ .+.+..|+
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adr 223 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHK 223 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 457999999999999999999999999999999999999999999999976 4899999999986 44556676
No 322
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.98 E-value=3.6e-32 Score=311.48 Aligned_cols=198 Identities=23% Similarity=0.278 Sum_probs=160.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHD--IHIGEMTVRETLAFS 71 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~--~~~~~~Tv~e~l~f~ 71 (1245)
+++|+|+||||||||+++|+|.++|....+|+|.++|+++..... ++.++||+|++ .+.+.+|+.+++.+.
T Consensus 44 ~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~ 123 (330)
T PRK09473 44 TLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 123 (330)
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHH
Confidence 479999999999999999999998742348999999998765432 14699999997 688999999999865
Q ss_pred HhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccch
Q 000872 72 ARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrq 151 (1245)
...... ... .+....+.++++.+||++..+. . ++.+++|||||||
T Consensus 124 ~~~~~~---------~~~------------------------~~~~~~~~~~L~~vgL~~~~~~-~-~~~p~~LSgG~~Q 168 (330)
T PRK09473 124 LMLHKG---------MSK------------------------AEAFEESVRMLDAVKMPEARKR-M-KMYPHEFSGGMRQ 168 (330)
T ss_pred HHHhcC---------CCH------------------------HHHHHHHHHHHHHcCCCChHHH-h-cCCcccCCHHHHH
Confidence 432210 000 0112235667888999764322 2 2456679999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++|||||+.+|++||+||||+|||+.++.++.+.|+++.+. .++++++++|+...+..++|+|++|++|++++.|+.+
T Consensus 169 Rv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 169 RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998764 3678888999999999999999999999999999988
Q ss_pred hHH
Q 000872 232 HVE 234 (1245)
Q Consensus 232 ~~~ 234 (1245)
++.
T Consensus 248 ~i~ 250 (330)
T PRK09473 248 DVF 250 (330)
T ss_pred HHH
Confidence 874
No 323
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.4e-32 Score=299.07 Aligned_cols=191 Identities=24% Similarity=0.397 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|..+|. +|+|.++|+++..... ++.++|++|++.+++.+|++||+.+..... . .
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~-~-~ 101 (232)
T PRK10771 27 RVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG-L-K 101 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccc-c-C
Confidence 47999999999999999999999987 9999999988754322 356999999999999999999998642110 0 0
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
. .. .....++++++.+||++..++.+. .||||||||++||||+
T Consensus 102 -~------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral 144 (232)
T PRK10771 102 -L------NA-------------------------AQREKLHAIARQMGIEDLLARLPG-----QLSGGQRQRVALARCL 144 (232)
T ss_pred -C------CH-------------------------HHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHHHHHHHHHHHH
Confidence 0 00 001235668889999877776665 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.+.+|++++|++|++++.|+.+++.
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQE-RQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999988653 3567788999999999999999999999999999987764
No 324
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.1e-31 Score=302.84 Aligned_cols=202 Identities=25% Similarity=0.275 Sum_probs=165.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCe-eEEEEEECCee
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGY-ITGNITISGYP 753 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~-~~G~i~~~g~~ 753 (1245)
.++++|+++.++. ..+.+|+|+|++|++||++||+||||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788898877531 12359999999999999999999999999999999999865431 23999999998
Q ss_pred CCc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000872 754 KNQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lS 829 (1245)
... ...++.+||++|+.. .++..||.|++.|....+ ..+.++.+++++++++.+||.+..+..+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 653 234567899999974 567789999998764322 2344555667899999999988766653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|+++. + ...|+
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~ 212 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQ 212 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCE
Confidence 99999999999999999999999999999999999999999998764 8999999999874 3 45676
No 325
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=298.00 Aligned_cols=204 Identities=21% Similarity=0.270 Sum_probs=159.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eeEEEEEECCe
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--RG-YITGNITISGY 752 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~~-~~~G~i~~~g~ 752 (1245)
-+++|+++.+. .+.+|+|+|++++|||+++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35677776542 2369999999999999999999999999999999999754 11 35899999998
Q ss_pred eCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 753 PKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 753 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
++.. ..+++.++|++|+..+++. |+.|++.+....+. .....++.++.++++++.+|+.+...+.... ....
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1346679999999888775 99999987643331 1112233445678899999986532111211 2357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++|||+|+++|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+..|+
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~ 217 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDR 217 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 55566676
No 326
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.1e-31 Score=294.94 Aligned_cols=196 Identities=22% Similarity=0.260 Sum_probs=160.1
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+.. ...|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------------~~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH---------------LPMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTP--ASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC---------------ccceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCeecC
Confidence 467888877631 12389999999999999999999999999999998654 4899999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000872 756 QE-TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRK 834 (1245)
Q Consensus 756 ~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerq 834 (1245)
.. ..++.++|++|++.+++.+|+.|++.+..... .. ..+..+++++++++.+|+.+..+..+ +.|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LK-LNAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cC-CCHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 31 23457899999999999999999997653211 11 12234566899999999988777664 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 835 RLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 835 r~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|++||++++.+|++++|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 199 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPR 199 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999998754 899999999986 44556666
No 327
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.98 E-value=3.9e-32 Score=298.05 Aligned_cols=191 Identities=24% Similarity=0.306 Sum_probs=154.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCC----CCceeeEEEECCccCCCCcc-cceEEEeccccc--cCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDS----SLKASGKVTYNGHDMHEFVP-QRTAAYISQHDI--HIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+.+|+.||+.+...
T Consensus 14 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~ 90 (230)
T TIGR02770 14 VLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLR 90 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHH
Confidence 4799999999999999999999987 6 9999999988754322 257999999974 5567899999987543
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc---cccccccCccccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV---CADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~vg~~~~~~LSGGqr 150 (1245)
..+.. .. +....++++++.+||++ ..+.. +..||||||
T Consensus 91 ~~~~~---------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~ 131 (230)
T TIGR02770 91 SLGKL---------SK-------------------------QARALILEALEAVGLPDPEEVLKKY-----PFQLSGGML 131 (230)
T ss_pred HcCcc---------HH-------------------------HHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHH
Confidence 21100 00 01123566888899973 33443 446999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||++|||||+.+|++++|||||+|||+.+...+.+.|+++++. .+++|++++|+.+++...+|++++|++|+++..|++
T Consensus 132 qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 210 (230)
T TIGR02770 132 QRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMDDGRIVERGTV 210 (230)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988653 356788899999999999999999999999999998
Q ss_pred hhHH
Q 000872 231 EHVE 234 (1245)
Q Consensus 231 ~~~~ 234 (1245)
+++.
T Consensus 211 ~~~~ 214 (230)
T TIGR02770 211 KEIF 214 (230)
T ss_pred HHHH
Confidence 7763
No 328
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.98 E-value=1.9e-31 Score=305.41 Aligned_cols=209 Identities=21% Similarity=0.292 Sum_probs=167.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-eeEEEEEECCee
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-YITGNITISGYP 753 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~~~G~i~~~g~~ 753 (1245)
-++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|..++. ..+|+|.+||.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47889998776421 12246999999999999999999999999999999999986542 138999999998
Q ss_pred CCc---cc---c-cceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000872 754 KNQ---ET---F-TRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPG 824 (1245)
Q Consensus 754 ~~~---~~---~-~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~ 824 (1245)
+.. .. + ++.++||+|+. .+.|.+|+.+++........ ....++..+++.++++.+||.+..+. .+ ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~-~~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKR-MK-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHH-hc-CC
Confidence 643 11 1 24799999997 67889999999876554332 23445556678899999999754322 12 23
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++||++|+.+|++|++||||+|||..++..+++.|+++.++ |.|+|+++|++. .+.+..|+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dr 231 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDK 231 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCE
Confidence 4679999999999999999999999999999999999999999999999765 899999999986 44556677
No 329
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.98 E-value=2.9e-32 Score=297.79 Aligned_cols=181 Identities=23% Similarity=0.368 Sum_probs=147.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+|++||+.+...
T Consensus 33 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~ 109 (221)
T TIGR02211 33 IVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLL 109 (221)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999999987 9999999988754321 1469999999988889999999988643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.... . .. +....++++++.+||++..+..++ .||||||||+
T Consensus 110 ~~~~----~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv 150 (221)
T TIGR02211 110 IGKK----S------VK------------------------EAKERAYEMLEKVGLEHRINHRPS-----ELSGGERQRV 150 (221)
T ss_pred hcCC----C------HH------------------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHH
Confidence 2110 0 00 001234568888999876665554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEE
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIV 225 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv 225 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+.++++++|+.+++.. +|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRE-LNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 9999999999999999999999999999999999988653 35677788999887754 7999999999975
No 330
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.2e-31 Score=304.52 Aligned_cols=210 Identities=23% Similarity=0.252 Sum_probs=167.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-++.+|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~--~-~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL--F-KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc--c-ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 47889998877421100 0 001124699999999999999999999999999999999998654 489999999886
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000872 755 NQE------TFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGV 825 (1245)
Q Consensus 755 ~~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 825 (1245)
... .+++.++||+|+. .+.|.+|+.+++....... .....++..+++.++++.+||.+ ..+.. .
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 3456799999997 5788899999987654332 12345556678899999999963 44443 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..||||||||++|||||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||+.+ .+.+..|+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adr 224 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADE 224 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCE
Confidence 579999999999999999999999999999999999999999999998764 899999999976 44445666
No 331
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.8e-31 Score=297.00 Aligned_cols=204 Identities=22% Similarity=0.303 Sum_probs=160.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|+++++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887652 235999999999999999999999999999999999964321 2489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ...++.++|++|+..+++ .|++|++.+....+. ....++.++.++++++.+++.+....... ....
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLK-KSAL 145 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHh-cCCC
Confidence 87642 234567899999988777 899999988654331 11233445667888888887531111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. .+.+..|+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~ 214 (250)
T PRK14240 146 GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDK 214 (250)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCE
Confidence 799999999999999999999999999999999999999999999985 4799999999975 45556666
No 332
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.98 E-value=3.6e-32 Score=298.84 Aligned_cols=187 Identities=26% Similarity=0.359 Sum_probs=152.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+|++||+.++.....
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~ 104 (230)
T TIGR03410 28 VTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP 104 (230)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC
Confidence 47999999999999999999999987 9999999988754322 3569999999999999999999988653211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcC-CcccccccccCccccccccccchhhHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLD-LDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
. .. ....+++++.++ +.+..++.+ +.||||||||++|
T Consensus 105 ~----------~~---------------------------~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrv~l 142 (230)
T TIGR03410 105 R----------RS---------------------------RKIPDEIYELFPVLKEMLGRRG-----GDLSGGQQQQLAI 142 (230)
T ss_pred c----------ch---------------------------HHHHHHHHHHHHhHHHHhhCCh-----hhCCHHHHHHHHH
Confidence 0 00 011233455554 444444444 4699999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||||+.+|++++|||||+|||+.++.++.+.|+++++. .++++++++|+.+++...||++++|++|++++.|+.+++
T Consensus 143 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 143 ARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999999999988653 366788899999999999999999999999999998765
No 333
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-31 Score=298.56 Aligned_cols=204 Identities=22% Similarity=0.281 Sum_probs=161.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--RG-YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~~-~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++|++||++||+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478899987652 2359999999999999999999999999999999999754 21 1489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++. |++|++.+....+. ....++.+++++++++.+++.+....... ...+
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87632 2345679999999888875 99999987643321 11233445567888999998642111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~ 223 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQ 223 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 799999999986 55566676
No 334
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.8e-31 Score=297.51 Aligned_cols=204 Identities=27% Similarity=0.333 Sum_probs=160.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--RG-YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~~-~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 477888887653 2359999999999999999999999999999999999632 21 2479999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++ .|++|++.+....+. ....+..++.++++++.+++.+....... ...+
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLH-DSAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcc
Confidence 87632 234567999999988777 899999987654321 11223344567888999987532111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~ 216 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDR 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 699999999986 55666776
No 335
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.9e-32 Score=309.93 Aligned_cols=192 Identities=20% Similarity=0.238 Sum_probs=159.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHD--IHIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~ 72 (1245)
+++|+|+||||||||+++|+|.++|. +|+|.++|+++.... .++.++||+|++ .+.+.+||.+++....
T Consensus 43 ~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~ 119 (327)
T PRK11308 43 TLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPL 119 (327)
T ss_pred EEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHH
Confidence 47999999999999999999999887 999999999875532 235799999997 5888899999998654
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc-cccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV-CADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1245)
..... .... +....++++++.+||.+ ..+..+ ..|||||||
T Consensus 120 ~~~~~---------~~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~p-----~~LSgGq~Q 161 (327)
T PRK11308 120 LINTS---------LSAA------------------------ERREKALAMMAKVGLRPEHYDRYP-----HMFSGGQRQ 161 (327)
T ss_pred HHccC---------CCHH------------------------HHHHHHHHHHHHCCCChHHhcCCC-----ccCCHHHHH
Confidence 32210 0000 01234567899999963 555544 469999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++|||||+.+|++||+||||++||..++.++++.|+++.+. .++++++++|+...+..+||+|++|++|++++.|+.+
T Consensus 162 Rv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~ 240 (327)
T PRK11308 162 RIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKE 240 (327)
T ss_pred HHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998764 3677888999999999999999999999999999988
Q ss_pred hHH
Q 000872 232 HVE 234 (1245)
Q Consensus 232 ~~~ 234 (1245)
++.
T Consensus 241 ~~~ 243 (327)
T PRK11308 241 QIF 243 (327)
T ss_pred HHh
Confidence 774
No 336
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.98 E-value=2e-31 Score=284.60 Aligned_cols=183 Identities=20% Similarity=0.300 Sum_probs=151.7
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++++. ++.+++ +|++++|||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (195)
T PRK13541 2 LSLHQLQFNIE-------------QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQP--SSGNIYYKNCNIN 65 (195)
T ss_pred eEEEEeeEEEC-------------CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCcccC
Confidence 46778877652 124555 9999999999999999999999999999998654 4899999998764
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000872 756 QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKR 835 (1245)
Q Consensus 756 ~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr 835 (1245)
... ++.++|++|+...++..||+|++.+...... .++.++++++.+++.+..+.. .+.||||||||
T Consensus 66 ~~~-~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~--------~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~r 131 (195)
T PRK13541 66 NIA-KPYCTYIGHNLGLKLEMTVFENLKFWSEIYN--------SAETLYAAIHYFKLHDLLDEK-----CYSLSSGMQKI 131 (195)
T ss_pred hhh-hhhEEeccCCcCCCccCCHHHHHHHHHHhcc--------cHHHHHHHHHHcCCHhhhccC-----hhhCCHHHHHH
Confidence 322 3458999998877788999999987543221 133567888999998766654 34699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 836 LTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 836 ~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
++||++++.+|++++|||||+|||+.++..+.+.|++..++|+|||+++|++.
T Consensus 132 l~la~al~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~ 184 (195)
T PRK13541 132 VAIARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLES 184 (195)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 99999999999999999999999999999999999877667899999999976
No 337
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.1e-32 Score=306.44 Aligned_cols=190 Identities=25% Similarity=0.363 Sum_probs=157.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..||+||+.++....+
T Consensus 35 ~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~ 111 (279)
T PRK13635 35 WVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIG 111 (279)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCC
Confidence 47999999999999999999999987 999999999875432 2457999999973 6778899999988643221
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +..+.++++++.+||.+..++.++ .||||||||++||
T Consensus 112 ~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~G~~qrv~la 152 (279)
T PRK13635 112 V----------PRE------------------------EMVERVDQALRQVGMEDFLNREPH-----RLSGGQKQRVAIA 152 (279)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHHHHH
Confidence 0 000 011235678889999887776665 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++. .||++++|++|++++.|+.+++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999998753 3677888999988886 59999999999999999987764
No 338
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.9e-31 Score=296.84 Aligned_cols=203 Identities=21% Similarity=0.300 Sum_probs=160.6
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECCe
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISGY 752 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g~ 752 (1245)
++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.+||.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887652 235999999999999999999999999999999999975421 25899999998
Q ss_pred eCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 753 PKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 753 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
+... ...++.++|++|++.+++ .|++|++.+...... ....+..++.+++.++.+|+.+..+... +.....
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhh
Confidence 7642 234567999999988887 899999987654321 1122334456788899998864211111 122457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~ 214 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADY 214 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999865 799999999986 45566676
No 339
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.2e-32 Score=300.51 Aligned_cols=187 Identities=23% Similarity=0.404 Sum_probs=151.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV----PQRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~- 108 (237)
T PRK11614 33 IVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA- 108 (237)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-
Confidence 47999999999999999999999987 999999998875432 2356999999999899999999998753211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHc-CCcccccccccCccccccccccchhhHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVL-DLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
.. .+ ....++.+++.+ ++.+..++.+ ..||||||||++|
T Consensus 109 --~~---------~~------------------------~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrl~l 148 (237)
T PRK11614 109 --ER---------DQ------------------------FQERIKWVYELFPRLHERRIQRA-----GTMSGGEQQMLAI 148 (237)
T ss_pred --Ch---------hH------------------------HHHHHHHHHHHHHHHHHHHhCch-----hhCCHHHHHHHHH
Confidence 00 00 001123344555 3554444433 4599999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 149 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (237)
T PRK11614 149 GRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE--QGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDAL 224 (237)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999999999999999998865 356777789999999999999999999999999998776
No 340
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.98 E-value=4.2e-32 Score=261.38 Aligned_cols=181 Identities=28% Similarity=0.403 Sum_probs=155.9
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
++|+|||||||||||-+++|+-.|+ +|+|.+.|+++....- .+.+|+|+|...++|++|..||+...+.+
T Consensus 39 vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL 115 (228)
T COG4181 39 VAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLEL 115 (228)
T ss_pred EEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhh
Confidence 6999999999999999999999988 9999999999865532 36899999999999999999999988777
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
++...+ +........++.+||.+..+.+.+ +|||||+|||+
T Consensus 116 ~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~HyP~-----qLSGGEQQRVA 156 (228)
T COG4181 116 RGESSA----------------------------------DSRAGAKALLEAVGLGKRLTHYPA-----QLSGGEQQRVA 156 (228)
T ss_pred cCCccc----------------------------------cHHHHHHHHHHHhCcccccccCcc-----ccCchHHHHHH
Confidence 652111 112234568899999998876665 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEE
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVY 226 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~ 226 (1245)
||||+...|+|||-||||-.||..+..+|.+.|..+.+. .++|++++||+. .+...|||.+-|.+|+++.
T Consensus 157 iARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 157 LARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhhhheeeeecceecc
Confidence 999999999999999999999999999999999998775 688889899986 5667899999999999874
No 341
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=99.98 E-value=1.3e-31 Score=292.53 Aligned_cols=195 Identities=23% Similarity=0.361 Sum_probs=158.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+. ++.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEc
Confidence 477888887652 23599999999999999999999999999999999997653 489999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|+..+++ .|++|++.+....+.. . ..++.++++++.+|+. ...+.. .+.|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 42 234567899999988776 5999999875443311 1 1234568899999995 344443 346999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++ |+|||+++|++.. + +..|+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~ 206 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADK 206 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999998754 8999999999863 2 33554
No 342
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=2.5e-32 Score=338.12 Aligned_cols=200 Identities=31% Similarity=0.443 Sum_probs=163.0
Q ss_pred CCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECC
Q 000872 672 EPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISG 751 (1245)
Q Consensus 672 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g 751 (1245)
....++|+|++++|+.. ++..+|+|+|+.|++||.+||+|||||||||++++|.|..++ .+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsR----------pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP--~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSR----------PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDP--TSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCC----------CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCceEEEcC
Confidence 34579999999998643 234699999999999999999999999999999999997654 589999999
Q ss_pred eeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH-------HcCCccccccccc
Q 000872 752 YPKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVME-------LVELNPLRQALVG 821 (1245)
Q Consensus 752 ~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~-------~l~l~~~~~~~~g 821 (1245)
.++.. +.+|..+|.|.|++.++. .|++||+.|+- .+.+.++ ++++.+ ...|.+-.||.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF~-~tI~eNI~~G~-----~dat~~~----i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLFA-TTIRENIRYGK-----PDATREE----IEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhhc-ccHHHHHhcCC-----CcccHHH----HHHHHHHccHHHHHHhhHHhhccccc
Confidence 88654 456788999999997764 79999998752 2223322 222222 2345566788998
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 822 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 822 ~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+.. ||||||||++|||||++||+||+||||||+||++++..++++|++.. +|+|.|+++|+.| .|=+ -|+
T Consensus 485 e~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS-tIrn-aD~ 556 (1228)
T KOG0055|consen 485 ERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS-TIRN-ADK 556 (1228)
T ss_pred CCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh-hhhc-cCE
Confidence 77654 99999999999999999999999999999999999999999998765 6999999999987 3333 555
No 343
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.98 E-value=5.4e-32 Score=293.42 Aligned_cols=186 Identities=23% Similarity=0.338 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++||+.+......
T Consensus 26 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--- 99 (213)
T TIGR01277 26 IVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--- 99 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhccC---
Confidence 47999999999999999999999987 999999998875422 34679999999999999999999987532100
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
..+ . +.+..++++++.+||++..++.+. .||||||||++||||+
T Consensus 100 ~~~------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral 143 (213)
T TIGR01277 100 KLN------A-------------------------EQQEKVVDAAQQVGIADYLDRLPE-----QLSGGQRQRVALARCL 143 (213)
T ss_pred Ccc------H-------------------------HHHHHHHHHHHHcCcHHHhhCCcc-----cCCHHHHHHHHHHHHH
Confidence 000 0 001234568889999876665554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++.+.||++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998653 36778889999999999999999999999998874
No 344
>PRK10908 cell division protein FtsE; Provisional
Probab=99.98 E-value=3.7e-32 Score=296.86 Aligned_cols=181 Identities=24% Similarity=0.330 Sum_probs=149.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~ 106 (222)
T PRK10908 30 MAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLII 106 (222)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHh
Confidence 47999999999999999999999887 999999998775422 235799999999888999999999886432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+.. .. +....++++++.+||.+..++.++ .||||||||++
T Consensus 107 ~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 147 (222)
T PRK10908 107 AGAS----------GD------------------------DIRRRVSAALDKVGLLDKAKNFPI-----QLSGGEQQRVG 147 (222)
T ss_pred cCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCCch-----hCCHHHHHHHH
Confidence 2100 00 001224567888898876665544 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEE
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIV 225 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv 225 (1245)
|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++...||++++|++|+++
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 148 IARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR--VGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999999999999999864 3567888999999999999999999999975
No 345
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.2e-31 Score=296.26 Aligned_cols=203 Identities=22% Similarity=0.280 Sum_probs=161.4
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887652 235999999999999999999999999999999999975421 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQALVGLPGV 825 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~g~~~~ 825 (1245)
.++.. ...++.++|++|++.+++ .|++|++.|...... .....+.+++++++++.+++.+ +.+ ... ...
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~-~~~ 145 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKD-DLK-KSA 145 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhh-Hhh-CCc
Confidence 88642 133567899999988887 899999988654321 1123344556788999998853 111 111 124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 146 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~ 215 (251)
T PRK14270 146 LKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDY 215 (251)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCE
Confidence 57999999999999999999999999999999999999999999999875 689999999985 55666776
No 346
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=99.98 E-value=5.1e-32 Score=296.46 Aligned_cols=187 Identities=34% Similarity=0.570 Sum_probs=150.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC---CCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD---SSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+||+||+.++......
T Consensus 35 ~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~ 111 (226)
T cd03234 35 VMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLP 111 (226)
T ss_pred EEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcc
Confidence 479999999999999999999998 66 999999998875434456799999999999999999999986543211
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHH-HHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDY-ILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
.... ... ....++. .++.+++.+..++.+ +.||||||||++||
T Consensus 112 ~~~~-------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la 155 (226)
T cd03234 112 RKSS-------DAI------------------------RKKRVEDVLLRDLALTRIGGNLV-----KGISGGERRRVSIA 155 (226)
T ss_pred cccc-------hHH------------------------HHHHHHHHHHHhhcchhhhcccc-----cCcCHHHHHHHHHH
Confidence 0000 000 0011233 677788876655544 45999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCC-hhHHhhccceEEecCCcEEEec
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPA-PEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~-~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
|||+.+|+++||||||+|||+.++..+.+.|+++++ .+.++++++|+. .++.+.||++++|++|++++.|
T Consensus 156 ral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~--~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 156 VQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR--RNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999998864 255677788887 6899999999999999998875
No 347
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.98 E-value=5.1e-32 Score=297.57 Aligned_cols=187 Identities=27% Similarity=0.364 Sum_probs=149.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHD--IHIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~ 72 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+++.+||+||+.+..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~ 109 (228)
T cd03257 33 TLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPL 109 (228)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHH
Confidence 47999999999999999999999887 999999999875432 245799999998 4667899999998764
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1245)
....... ..+ ......+++++.++|. +..+..+ ..|||||||
T Consensus 110 ~~~~~~~---------~~~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G~~q 152 (228)
T cd03257 110 RIHGKLS---------KKE-----------------------ARKEAVLLLLVGVGLPEEVLNRYP-----HELSGGQRQ 152 (228)
T ss_pred HhccCCc---------HHH-----------------------HHHHHHHHHHHHCCCChhHhhCCc-----hhcCHHHHH
Confidence 3221000 000 0011124577888885 4455444 459999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
|++|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++...||++++|++|+++..|
T Consensus 153 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 153 RVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998753 2567888999999999999999999999998765
No 348
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.98 E-value=1.7e-31 Score=299.22 Aligned_cols=208 Identities=20% Similarity=0.249 Sum_probs=164.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++++..+.. ....+.+.+|+|+|+++++||++||+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 788899887742100 0001124699999999999999999999999999999999998654 4899999998764
Q ss_pred c---ccccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCC
Q 000872 756 Q---ETFTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~~lS 829 (1245)
. ...++.++|++|+.. +.+.+|+.|++.+....+. .....+.++.++++++.+|+. +..+.. ...||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 123456899999875 5677899999987654331 223344456688999999994 555543 34699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~ 219 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQ 219 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCE
Confidence 99999999999999999999999999999999999999999998764 899999999985 55556676
No 349
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.98 E-value=9.5e-32 Score=312.16 Aligned_cols=179 Identities=25% Similarity=0.359 Sum_probs=154.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-------ccccceEEEEccCCCCCCCCCH
Q 000872 706 GVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-------ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 706 ~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 89999999999999999999999999999998654 48999999987632 1345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
+||+.|..... ...+.+++++++++.+||.+..+..+ +.||||||||++|||+|+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12334556899999999988777654 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 859 DARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+.++..+.+.|++++++ |+|||+++|++. ++....|+
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~ 201 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADR 201 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999998765 899999999986 56667777
No 350
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.5e-31 Score=301.02 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=164.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+.. ...+.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEEC
Confidence 4788999887631 0123599999999999999999999999999999999998764 489999999886
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ---ETFTRISGYCEQNDI-HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ...++.+||++|++. .++..||.|++.+..... ....++..++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234667999999964 566789999998764322 2233444567899999999987766543 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++... ...|+
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~--~~~d~ 209 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEA--ASSDR 209 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH--HhCCE
Confidence 9999999999999999999999999999999999999999998765 89999999998753 23565
No 351
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.4e-32 Score=307.03 Aligned_cols=191 Identities=25% Similarity=0.340 Sum_probs=157.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCC--C---cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHE--F---VPQRTAAYISQHDI-HIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|+++.. . ..++.++|++|++. .+...||+||+.++...
T Consensus 34 ~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~ 110 (283)
T PRK13636 34 VTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVN 110 (283)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHH
Confidence 47999999999999999999999987 9999999988741 1 12457999999863 34568999999876432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+. ... +..+.++++++.+||.+..++.++ .||||||||++
T Consensus 111 ~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~G~~qrl~ 151 (283)
T PRK13636 111 LKL----------PED------------------------EVRKRVDNALKRTGIEHLKDKPTH-----CLSFGQKKRVA 151 (283)
T ss_pred cCC----------CHH------------------------HHHHHHHHHHHHCCChhhhhCCcc-----cCCHHHHHHHH
Confidence 110 000 011235678899999877766554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+.+|++|||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++...||++++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 3667888999999999999999999999999999988764
No 352
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.2e-31 Score=291.02 Aligned_cols=178 Identities=23% Similarity=0.343 Sum_probs=149.3
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-------ccccceEEEEccCCCCCCCCCH
Q 000872 706 GVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-------ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 706 ~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
|+|+++++ |+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998654 48999999987532 1235678999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
+|++.+..... .....+++++++++.+|+.+..+.. .+.||||||||++||++|+.+|++++|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 2233445678999999998766554 3469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 859 DARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+.++..+.+.|++++++ |+|||+++|++. ++-+..|+
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 201 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADR 201 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCE
Confidence 999999999999998765 899999999985 33445555
No 353
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=2.4e-31 Score=297.16 Aligned_cols=204 Identities=22% Similarity=0.307 Sum_probs=161.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-e--eEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG-Y--ITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~-~--~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++++|||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 477888887653 235999999999999999999999999999999999975532 2 489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|+..+++ .|++||+.+....+. .....+.++.++++++.+++.+...... +....
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 149 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKL-NKSAL 149 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHh-cCCcc
Confidence 87632 234567999999988887 899999987654332 1123334456788899998843111111 12245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 150 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~ 218 (259)
T PRK14260 150 GLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDF 218 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCe
Confidence 7999999999999999999999999999999999999999999999865 699999999986 55566666
No 354
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.98 E-value=7e-32 Score=294.89 Aligned_cols=182 Identities=26% Similarity=0.396 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+|++||+.+.......
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~--- 100 (223)
T TIGR03740 28 VYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARENLKVHTTLLGL--- 100 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcCC---
Confidence 47999999999999999999999887 999999998765322 25799999999889999999999875432110
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
.+..+.++++.+||++..+..++ .||||||||++||||++
T Consensus 101 -----------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv~laral~ 140 (223)
T TIGR03740 101 -----------------------------------PDSRIDEVLNIVDLTNTGKKKAK-----QFSLGMKQRLGIAIALL 140 (223)
T ss_pred -----------------------------------CHHHHHHHHHHcCCcHHHhhhHh-----hCCHHHHHHHHHHHHHh
Confidence 00123557788899876665554 59999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
.+|++++|||||+|||+.++..+.+.|+++++ .+.++++++|+.+++...||++++|++|++++.|++.
T Consensus 141 ~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 141 NHPKLLILDEPTNGLDPIGIQELRELIRSFPE--QGITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred cCCCEEEECCCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 99999999999999999999999999999864 3567888999999999999999999999999999764
No 355
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=4.7e-32 Score=304.48 Aligned_cols=188 Identities=27% Similarity=0.388 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc----ccceEEEeccccc-cCCCCCHHHHHHHHHhcc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV----PQRTAAYISQHDI-HIGEMTVRETLAFSARCQ 75 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~ 75 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...|++||+.+.....
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~ 106 (274)
T PRK13644 30 YIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL 106 (274)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc
Confidence 47999999999999999999999987 999999999875432 2356999999875 366789999998764321
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
+. ... +..+.++++++.+||.+..++.++ .||||||||++|
T Consensus 107 ~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~l 147 (274)
T PRK13644 107 CL----------PPI------------------------EIRKRVDRALAEIGLEKYRHRSPK-----TLSGGQGQCVAL 147 (274)
T ss_pred CC----------CHH------------------------HHHHHHHHHHHHCCCHHHhcCCcc-----cCCHHHHHHHHH
Confidence 10 000 011235668889999887776655 599999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||||+.+|+++||||||+|||+.++..+.+.|++++. .+++|++++|+.+++ ..||++++|++|++++.|+.+++
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~~G~i~~~g~~~~~ 222 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMDRGKIVLEGEPENV 222 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999864 367788899999988 56999999999999999998775
No 356
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.98 E-value=6.2e-32 Score=300.01 Aligned_cols=191 Identities=26% Similarity=0.419 Sum_probs=154.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+|||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+++ .|++||+.+...
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~ 107 (247)
T TIGR00972 29 VTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPR 107 (247)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHH
Confidence 47999999999999999999999753 12389999999987532 12457999999988888 999999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD----VCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1245)
..+. .. .. +....++.+++.+||. +..+..+ +.|||||
T Consensus 108 ~~~~---~~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LSgG~ 149 (247)
T TIGR00972 108 LHGI---KD------KK------------------------ELDEIVEESLKKAALWDEVKDRLHDSA-----LGLSGGQ 149 (247)
T ss_pred hcCC---CC------HH------------------------HHHHHHHHHHHHcCCCcchhhHhhCCc-----ccCCHHH
Confidence 3210 00 00 0112346678888987 4455444 4699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++|||||+.+|+++||||||+|||+.++..+.+.|+++++ + .++++++|+.+++..+||++++|++|++++.|+
T Consensus 150 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 150 QQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998864 3 678889999999999999999999999999998
Q ss_pred hhhH
Q 000872 230 LEHV 233 (1245)
Q Consensus 230 ~~~~ 233 (1245)
++++
T Consensus 227 ~~~~ 230 (247)
T TIGR00972 227 TEQI 230 (247)
T ss_pred HHHH
Confidence 8765
No 357
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=3e-32 Score=277.85 Aligned_cols=192 Identities=23% Similarity=0.388 Sum_probs=170.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccCCCCCHHHHHHHHHhccCCCCc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGSR 80 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~~ 80 (1245)
|.+++|||||||||++++|+|.++|+ +|+|.++|.+++... ..+|||+|.+--+++.+||.|.|.|.+++++++..
T Consensus 30 i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~~ 105 (300)
T COG4152 30 IFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPKA 105 (300)
T ss_pred EEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCcHHHHHHHHHHhcCCcHH
Confidence 57899999999999999999999988 999999999876543 34699999999999999999999999999875321
Q ss_pred cchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHHh
Q 000872 81 YDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEMLV 160 (1245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al~ 160 (1245)
+++...+.+++.+++......+| +.||.|++|++.+-.+++
T Consensus 106 ----------------------------------e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisavi 146 (300)
T COG4152 106 ----------------------------------EIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVI 146 (300)
T ss_pred ----------------------------------HHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHh
Confidence 12334577889999988776554 469999999999999999
Q ss_pred cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHHHH
Q 000872 161 GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQFF 237 (1245)
Q Consensus 161 ~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~~f 237 (1245)
++|+++|||||+|||||.+.+.+.+.+++++. .|.||+..+|.++.+.++||++++|++|+.|.+|+.++++..|
T Consensus 147 HePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 147 HEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred cCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhc
Confidence 99999999999999999999999999999876 5788888999999999999999999999999999999987643
No 358
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.9e-31 Score=299.63 Aligned_cols=203 Identities=25% Similarity=0.387 Sum_probs=159.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. +++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 578888887652 123699999999999999999999999999999999998654 489999999876
Q ss_pred CcccccceEEEEccCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000872 755 NQETFTRISGYCEQNDIHS--PYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTE 831 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~--~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgG 831 (1245)
.....++.++|++|+..+. ...+++|++.+....... ........++.++++++.+|+.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4332234689999987642 234788888653211000 01112233456788999999988777654 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 832 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 832 erqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~ 211 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDY 211 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999998777999999999985 44555665
No 359
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.98 E-value=4.1e-32 Score=294.31 Aligned_cols=179 Identities=28% Similarity=0.444 Sum_probs=146.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+|++||+.+.....+
T Consensus 29 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~ 105 (211)
T cd03225 29 FVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLG 105 (211)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcC
Confidence 47999999999999999999999887 999999998775432 2357999999874 3678899999987543211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +....++++++.+||++..+..++ .||||||||++||
T Consensus 106 ~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la 146 (211)
T cd03225 106 L----------PEE------------------------EIEERVEEALELVGLEGLRDRSPF-----TLSGGQKQRVAIA 146 (211)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHH
Confidence 0 000 001234567888999876665554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCc
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQ 223 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~ 223 (1245)
|||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++..+||++++|++|+
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 147 GVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA--EGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999999875 25678889999999999999999999985
No 360
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=3.8e-31 Score=297.23 Aligned_cols=204 Identities=23% Similarity=0.284 Sum_probs=161.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~~~g 751 (1245)
.++++|+++.+. ++.+|+|+|+.++|||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 588999988763 23599999999999999999999999999999999998542 13589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++. |++||+.+....+. ....+..++.++++++.+++.+......+ ...+
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLH-ENAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhh-CCcc
Confidence 87642 2346779999999888875 99999987654321 11222334567888888888642111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~ 236 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDY 236 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999875 799999999985 44556676
No 361
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.5e-32 Score=301.68 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=158.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++..... +..++|++|++.+++.+||+||+.++.....
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~ 109 (255)
T PRK11300 33 IVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQL 109 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccc
Confidence 47999999999999999999999987 9999999988754321 2358999999999999999999998643110
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
...... ..... +..+ ....+....++++++.+||.+..+..++ .||||||||++||
T Consensus 110 ~~~~~~---~~~~~-------~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~la 165 (255)
T PRK11300 110 KTGLFS---GLLKT-------PAFR---------RAESEALDRAATWLERVGLLEHANRQAG-----NLAYGQQRRLEIA 165 (255)
T ss_pred cchhhh---hhccc-------cccc---------cchhHHHHHHHHHHHhCChhhhhhCChh-----hCCHHHHHHHHHH
Confidence 000000 00000 0000 0000112335667888999876666554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 166 ~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 241 (255)
T PRK11300 166 RCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEI 241 (255)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHH
Confidence 9999999999999999999999999999999998653 356788899999999999999999999999999987765
No 362
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.98 E-value=6.4e-32 Score=299.22 Aligned_cols=196 Identities=22% Similarity=0.354 Sum_probs=157.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~ 106 (242)
T TIGR03411 30 LRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDK 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhccc
Confidence 47999999999999999999999887 9999999987754321 2469999999999999999999988543110
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
..+........ .+....++++++.+|+++..++.++ .||||||||++||
T Consensus 107 --~~~~~~~~~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Ge~qrv~la 155 (242)
T TIGR03411 107 --SVFASLFFRLS------------------------AEEKDRIEEVLETIGLADEADRLAG-----LLSHGQKQWLEIG 155 (242)
T ss_pred --ccccccccccH------------------------HHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHH
Confidence 00000000000 0012335678889999877766555 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||++.+|++++|||||+|||+.++..+.+.|+++++ +.++++++|+.+++.++||++++|++|++++.|+.+++
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 999999999999999999999999999999999864 35788899999999999999999999999999987765
No 363
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.98 E-value=5.7e-32 Score=301.97 Aligned_cols=189 Identities=22% Similarity=0.316 Sum_probs=155.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC----------------cccceEEEeccccccCCCCCH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF----------------VPQRTAAYISQHDIHIGEMTV 64 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~~yv~Q~~~~~~~~Tv 64 (1245)
+++|+|+||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 33 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv 109 (257)
T PRK10619 33 VISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTV 109 (257)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcH
Confidence 47999999999999999999999887 99999999876421 123579999999999999999
Q ss_pred HHHHHHHHh-ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccc-cccccCccc
Q 000872 65 RETLAFSAR-CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCA-DTVVGDEML 142 (1245)
Q Consensus 65 ~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-~t~vg~~~~ 142 (1245)
+||+.++.. .... ... +....++++++.+||.+.. +.. +
T Consensus 110 ~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-----~ 150 (257)
T PRK10619 110 LENVMEAPIQVLGL----------SKQ------------------------EARERAVKYLAKVGIDERAQGKY-----P 150 (257)
T ss_pred HHHHHHHHHHhCCC----------CHH------------------------HHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 999987532 1100 000 0112345688899997653 433 3
Q ss_pred cccccccchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCC
Q 000872 143 RGISGGQRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDG 222 (1245)
Q Consensus 143 ~~LSGGqrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G 222 (1245)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+.++++++|+.+++..+||++++|++|
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~~~~~~~~d~i~~l~~G 228 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEMGFARHVSSHVIFLHQG 228 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999864 3677888999999999999999999999
Q ss_pred cEEEecChhhH
Q 000872 223 QIVYQGPLEHV 233 (1245)
Q Consensus 223 ~iv~~G~~~~~ 233 (1245)
++++.|+++++
T Consensus 229 ~i~~~~~~~~~ 239 (257)
T PRK10619 229 KIEEEGAPEQL 239 (257)
T ss_pred EEEEeCCHHHh
Confidence 99999988765
No 364
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.98 E-value=1.3e-31 Score=293.90 Aligned_cols=186 Identities=24% Similarity=0.294 Sum_probs=151.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--eeEEEEEECCeeCCcccc-cceEEEEccCCC--CCCCCC
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG--YITGNITISGYPKNQETF-TRISGYCEQNDI--HSPYVT 777 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~--~~~G~i~~~g~~~~~~~~-~~~~~~v~q~~~--~~~~lt 777 (1245)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|+.. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999986531 148999999988654322 357899999974 556789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000872 778 VYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP---LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 854 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEp 854 (1245)
+.|++.+...... ....+.+++++++++.+++.+ ..+.. ...||||||||++|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543321 112334566899999999973 33333 346999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 855 TSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 855 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+|||..+...+.+.|++++++ |+|||+++|+++ ++....|+
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 195 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADE 195 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999998764 899999999987 55566676
No 365
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.98 E-value=7e-32 Score=300.75 Aligned_cols=190 Identities=32% Similarity=0.488 Sum_probs=156.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.++......
T Consensus 30 ~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~ 106 (258)
T PRK13548 30 VVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGL 106 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCC
Confidence 47999999999999999999999887 999999998765432 235699999998888889999999875421100
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
. .. +....++++++.+||.+..++.++ .||||||||++|||
T Consensus 107 -~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGe~qrv~la~ 147 (258)
T PRK13548 107 -S---------RA------------------------EDDALVAAALAQVDLAHLAGRDYP-----QLSGGEQQRVQLAR 147 (258)
T ss_pred -C---------cH------------------------HHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHH
Confidence 0 00 001234668888999877776665 59999999999999
Q ss_pred HHh------cCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 158 MLV------GPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 158 al~------~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
||+ .+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++|+.+++..+||++++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHE-RGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 599999999999999999999999999998633 3567888999999999999999999999999999877
Q ss_pred hH
Q 000872 232 HV 233 (1245)
Q Consensus 232 ~~ 233 (1245)
++
T Consensus 227 ~~ 228 (258)
T PRK13548 227 EV 228 (258)
T ss_pred HH
Confidence 65
No 366
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=99.98 E-value=3.4e-31 Score=289.86 Aligned_cols=205 Identities=22% Similarity=0.280 Sum_probs=159.0
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECC--e-
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISG--Y- 752 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g--~- 752 (1245)
++++|+++.+..... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+|+|.++| .
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 467788776632100 00124699999999999999999999999999999999998654 479999984 2
Q ss_pred -eCCc---cc----ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000872 753 -PKNQ---ET----FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-RQALVGLP 823 (1245)
Q Consensus 753 -~~~~---~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~g~~ 823 (1245)
+... .. .++.++|++|+..+++.+||+|++.+..... ........+.+.++++.+|+.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3211 11 2346899999998999999999998764322 22333445567889999999753 3433
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+..|+
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~ 218 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADR 218 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcce
Confidence 3579999999999999999999999999999999999999999999998777999999999954 33344554
No 367
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=99.98 E-value=2.3e-31 Score=290.06 Aligned_cols=181 Identities=26% Similarity=0.345 Sum_probs=146.7
Q ss_pred ccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCC
Q 000872 697 HDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYV 776 (1245)
Q Consensus 697 ~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~l 776 (1245)
.++.+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+... ..+...+.+.+
T Consensus 31 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~---------~~~~~~~~~~~ 99 (224)
T cd03220 31 EVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP--DSGTVTVRGRVSSL---------LGLGGGFNPEL 99 (224)
T ss_pred hcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEchh---------hcccccCCCCC
Confidence 34556799999999999999999999999999999999997654 48999999976421 11122345678
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000872 777 TVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 856 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTs 856 (1245)
||+|++.+....+ .....+.++.++++++.+++.+..++.+ +.||||||||++|||+|+.+|++++|||||+
T Consensus 100 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~ 171 (224)
T cd03220 100 TGRENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLA 171 (224)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 9999998765432 1233444556788999999988777654 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 857 GLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 857 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 172 gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~ 211 (224)
T cd03220 172 VGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDR 211 (224)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 99999999999999998777899999999975 33344454
No 368
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.2e-31 Score=310.73 Aligned_cols=175 Identities=23% Similarity=0.356 Sum_probs=152.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-------ccccceEEEEccCCCCCCCCCH
Q 000872 706 GVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-------ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 706 ~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998654 48999999987532 2345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000872 779 YESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 858 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgL 858 (1245)
+||+.|... ...+++++++++.+||.+..+..+ +.||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 122356889999999988777654 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 859 DARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 859 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|+.++..+.+.|+++.++ |+|||+++|++. ++.++.|+
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~ 198 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADR 198 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCE
Confidence 999999999999998765 899999999985 66677777
No 369
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.6e-32 Score=303.52 Aligned_cols=191 Identities=25% Similarity=0.365 Sum_probs=157.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+...||+||+.+.....+
T Consensus 32 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~ 108 (277)
T PRK13652 32 RIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLG 108 (277)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 999999998875422 2356899999863 3446899999987543211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. .. .+..+.++++++.+||.+..++.+. .||||||||++||
T Consensus 109 ~----------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrl~la 149 (277)
T PRK13652 109 L----------DE------------------------ETVAHRVSSALHMLGLEELRDRVPH-----HLSGGEKKRVAIA 149 (277)
T ss_pred C----------CH------------------------HHHHHHHHHHHHHCCChhHhcCCcc-----cCCHHHHHHHHHH
Confidence 0 00 0011235678899999877776654 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 9999999999999999999999999999999998753 3577888999999999999999999999999999988764
No 370
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.1e-32 Score=303.24 Aligned_cols=189 Identities=27% Similarity=0.386 Sum_probs=154.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEecccccc-CCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIH-IGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~-~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.. +...|+.||+.+....
T Consensus 29 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~ 105 (271)
T PRK13638 29 VTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRN 105 (271)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHH
Confidence 47999999999999999999999987 99999999987421 123569999998752 4556899999875432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+. ... +....++++++.+||.+..++.++ .||||||||++
T Consensus 106 ~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~ 146 (271)
T PRK13638 106 LGV----------PEA------------------------EITRRVDEALTLVDAQHFRHQPIQ-----CLSHGQKKRVA 146 (271)
T ss_pred cCC----------CHH------------------------HHHHHHHHHHHHcCCHhHhcCCch-----hCCHHHHHHHH
Confidence 110 000 011234568888899877766554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|++++. .+++|++++|+.+++..+||++++|++|++++.|+++++
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA--QGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEV 223 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999864 356788899999999999999999999999999998765
No 371
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=3.9e-31 Score=295.54 Aligned_cols=205 Identities=21% Similarity=0.280 Sum_probs=163.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.++++|+++.+. .+.+|+|+|+++++||++||+|+||||||||+++|+|..++. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478899987763 225999999999999999999999999999999999976532 1379999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|+..+++ .|+.|++.+...... ..+..+.++.++++++.+++.+..+...+. ...
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567999999988887 899999987653321 112333445678899999986432222221 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+++|++|+|||||+|||..+...+.+.|+++++ .|+|||+++|++. ++.+..|+
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~ 220 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDF 220 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCE
Confidence 7999999999999999999999999999999999999999999999864 4899999999985 56677777
No 372
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.98 E-value=9.5e-32 Score=336.44 Aligned_cols=198 Identities=23% Similarity=0.303 Sum_probs=163.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++|.++. ..+++|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEEh
Confidence 6999999998742 124699999999999999999999999999999999998764 489999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 824 (1245)
++ ..+++.++|++|++.+++ -|++||+.++. +.+. .++.++++++..|+.+ -.||.+|..+
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~----~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g 478 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQY----SREQIEEAARMAYAMDFINKMDNGLDTVIGENG 478 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCC----CHHHHHHHHHHhCcHHHHHhcccccCceeCCCC
Confidence 53 456788999999998886 59999997641 1111 2344677777777553 3477777653
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
+.||||||||++|||+|+++|+||+||||||+||+.++..+.+.|+++. +++|+|+++|+++ ..+.+|+.
T Consensus 479 -~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~I 548 (582)
T PRK11176 479 -VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEI 548 (582)
T ss_pred -CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEE
Confidence 5699999999999999999999999999999999999999999999875 4799999999994 45678873
No 373
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.9e-32 Score=303.13 Aligned_cols=189 Identities=25% Similarity=0.364 Sum_probs=155.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++. .++.+||+||+.++.....
T Consensus 37 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~ 113 (271)
T PRK13632 37 YVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKK 113 (271)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcC
Confidence 47999999999999999999999987 999999999875432 2467999999974 5778999999987643211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. .. .+....++++++.+||.+..++.++ .||||||||++||
T Consensus 114 ~----------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 154 (271)
T PRK13632 114 V----------PP------------------------KKMKDIIDDLAKKVGMEDYLDKEPQ-----NLSGGQKQRVAIA 154 (271)
T ss_pred C----------CH------------------------HHHHHHHHHHHHHcCCHHHhhCCcc-----cCCHHHHHHHHHH
Confidence 0 00 0011235678889999877776654 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|||+.+|++++|||||+|||+.++..+.+.|+++++. +++++++++|+.+++. .||++++|++|++++.|+.+++
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999998653 3467888889888875 7999999999999999987765
No 374
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=9.4e-32 Score=303.98 Aligned_cols=189 Identities=23% Similarity=0.350 Sum_probs=152.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-------ccceEEEeccccc-cCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-------PQRTAAYISQHDI-HIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~ 72 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...||+||+.+..
T Consensus 35 ~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~ 111 (280)
T PRK13649 35 YTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGP 111 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHH
Confidence 47999999999999999999999987 999999998875321 2356999999862 233479999998764
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc-cccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV-CADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrq 151 (1245)
...+. ... +....++++++.+||.+ ..+..+ +.|||||||
T Consensus 112 ~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~q 152 (280)
T PRK13649 112 QNFGV----------SQE------------------------EAEALAREKLALVGISESLFEKNP-----FELSGGQMR 152 (280)
T ss_pred HHcCC----------CHH------------------------HHHHHHHHHHHHcCCChhhhhCCc-----ccCCHHHHH
Confidence 32110 000 01123456788889963 445444 459999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++|||||+.+|++|||||||+|||+.++..+.+.|+++++ .+++|++++|+.+++..+||++++|++|++++.|+++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ--SGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999864 3567888999999999999999999999999999987
Q ss_pred hH
Q 000872 232 HV 233 (1245)
Q Consensus 232 ~~ 233 (1245)
++
T Consensus 231 ~~ 232 (280)
T PRK13649 231 DI 232 (280)
T ss_pred HH
Confidence 76
No 375
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=3.1e-31 Score=294.92 Aligned_cols=204 Identities=24% Similarity=0.286 Sum_probs=160.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467788877652 235999999999999999999999999999999999975532 2489999999
Q ss_pred eeCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 752 YPKNQ----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 752 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
.+... ...++.++|++|++.+++ .|+.|++.+...... ....+..+++++++++.+++.+....... .....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCccc
Confidence 87631 234567999999988887 899999987643221 11223344567788888887542111111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~ 213 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDR 213 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999875 699999999985 55666676
No 376
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.1e-31 Score=303.83 Aligned_cols=210 Identities=17% Similarity=0.193 Sum_probs=162.3
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CeeEEEEEECCee
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR--GYITGNITISGYP 753 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~--~~~~G~i~~~g~~ 753 (1245)
++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|...+ ...+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888776421 1234699999999999999999999999999999999997642 1358999999987
Q ss_pred CCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCccccccccc
Q 000872 754 KNQE---T----FTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSE---VNSKTREMFVEEVMELVELNPLRQALVG 821 (1245)
Q Consensus 754 ~~~~---~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~~g 821 (1245)
+... . +++.++||+|+.. +.|.+||.+++........... ....+.++++.++++.+||.+..+..
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~-- 152 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAM-- 152 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHH--
Confidence 6431 1 1346999999975 5688999999975422111000 11233456788999999997532211
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 822 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 822 ~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.....||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+.+ .+.+..|+
T Consensus 153 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 153 RSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred hCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 1123579999999999999999999999999999999999999999999998764 899999999985 44456676
No 377
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.8e-31 Score=296.82 Aligned_cols=202 Identities=22% Similarity=0.291 Sum_probs=160.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~~~g 751 (1245)
.++++++++.+. .+.+|+|+|+.|++||++||+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 578899987652 23599999999999999999999999999999999997542 13589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++. |+.|++.+....+. ... ..+++++++++.+|+.+....... ....
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 179 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLD-SSGL 179 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHh-CCcc
Confidence 87532 2346679999999887775 99999987654432 122 334568899999998531111111 1235
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|+||+|||||+|||..+...+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 180 ~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dr 248 (285)
T PRK14254 180 DLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDK 248 (285)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCE
Confidence 7999999999999999999999999999999999999999999999976 489999999986 44455665
No 378
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.1e-32 Score=299.24 Aligned_cols=189 Identities=25% Similarity=0.343 Sum_probs=155.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCC------C---cccceEEEeccccccCCCCCHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHE------F---VPQRTAAYISQHDIHIGEMTVRETLAFS 71 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~ 71 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. . ..++.++|++|++.+++.+||+||+.+.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~ 106 (242)
T PRK11124 30 TLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEA 106 (242)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHH
Confidence 47999999999999999999999887 9999999987621 0 1235699999999999999999999753
Q ss_pred H-hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccc
Q 000872 72 A-RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 72 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1245)
. ...+. ... +....+++.++.+||++..+..++ .||||||
T Consensus 107 ~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 147 (242)
T PRK11124 107 PCRVLGL----------SKD------------------------QALARAEKLLERLRLKPYADRFPL-----HLSGGQQ 147 (242)
T ss_pred HHHHcCC----------CHH------------------------HHHHHHHHHHHHcCChhhhhCChh-----hCCHHHH
Confidence 2 11110 000 011235668888999876666554 5999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+..++.+.+|++++|++|++++.|++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~ 225 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998864 356788899999999999999999999999999987
Q ss_pred hhH
Q 000872 231 EHV 233 (1245)
Q Consensus 231 ~~~ 233 (1245)
++.
T Consensus 226 ~~~ 228 (242)
T PRK11124 226 SCF 228 (242)
T ss_pred HHh
Confidence 654
No 379
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.97 E-value=3.5e-31 Score=294.91 Aligned_cols=198 Identities=22% Similarity=0.261 Sum_probs=158.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--eeEEEEEECCe
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG--YITGNITISGY 752 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~--~~~G~i~~~g~ 752 (1245)
.++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578888887651 24899999999999999999999999999999999986541 15899999998
Q ss_pred eCCcccc-cceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---ccccccCCCCC
Q 000872 753 PKNQETF-TRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL---RQALVGLPGVN 826 (1245)
Q Consensus 753 ~~~~~~~-~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~~g~~~~~ 826 (1245)
++..... ++.++|++|+.. +.+..|+.+++.+.+.... ... .++.++++++.+++.+. .+.. .+
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 8653322 356999999974 4466799998866443221 111 23567899999999762 3332 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+..|+
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~ 210 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADD 210 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCE
Confidence 79999999999999999999999999999999999999999999998764 899999999986 34455565
No 380
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.9e-31 Score=297.05 Aligned_cols=204 Identities=25% Similarity=0.300 Sum_probs=163.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578899988763 246999999999999999999999999999999999976531 3589999999
Q ss_pred eeCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 752 YPKNQ----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 752 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
.+... ..+++.++|++|+..+++ .|++|++.+..... ...+.++.++.+.++++.+++.+..++... .....
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234667899999988887 89999998764322 112333444556788999998753322221 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+..|+
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dr 231 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDR 231 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999999875 589999999985 55566776
No 381
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.8e-31 Score=294.15 Aligned_cols=205 Identities=22% Similarity=0.270 Sum_probs=159.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCe---eEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGY---ITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~---~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+.|++||++||+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467788877652 2369999999999999999999999999999999999764322 379999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++.. ..+++.++|++|++.+++.+|+.|++.+...... ....++..+.++++++.+++.+...... +...+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 147 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRL-KTPAT 147 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhh-cCCcc
Confidence 87642 2345678999999999998999999987653321 1122333455677777777642111111 11245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++++ ++|||+++|++. .+.+..|+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~ 216 (252)
T PRK14272 148 GLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDT 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 799999999986 45556676
No 382
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.6e-31 Score=293.80 Aligned_cols=204 Identities=20% Similarity=0.260 Sum_probs=159.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|++|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 467888887652 235999999999999999999999999999999999976532 1369999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++. |++||+.+....+.. ...+..++.++++++.+++.+....... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 2346779999999988875 999999887543311 1122334557778888887542111111 2245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. +++|||+++|+++ .+-+..|+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~ 215 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDW 215 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCE
Confidence 799999999999999999999999999999999999999999999885 5899999999976 33345565
No 383
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.9e-31 Score=294.72 Aligned_cols=204 Identities=26% Similarity=0.297 Sum_probs=160.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.++++|+++.+. .+.+|+|+|++++|||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 477888887652 235999999999999999999999999999999999974321 1379999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ...++.++|++|+..+++. ||+||+.+....+.. ....+.++.++++++.+++.+...+..+ ...+
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87642 2345678999999888874 999999987554321 1223344567888888888532111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~ 217 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDY 217 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 34455666
No 384
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.6e-32 Score=307.81 Aligned_cols=196 Identities=20% Similarity=0.300 Sum_probs=155.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||||+++++ +.|++||+.|+..
T Consensus 110 ~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~~ 188 (329)
T PRK14257 110 VTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF-EMSIFDNVAYGPR 188 (329)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC-CCcHHHHHHhHHH
Confidence 47999999999999999999998631 12389999999987532 2356799999998876 5899999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+.. ..+ ..++.++..++..+|.+..++.+++ ...+||||||||+
T Consensus 189 ~~~~~----------~~~-----------------------~~~~~~~~~l~~~~L~~~l~~~~~~-~~~~LSgGqkqRl 234 (329)
T PRK14257 189 NNGIN----------DRK-----------------------ILEKIVEKSLKSAALWDEVKDDLDK-AGNALSGGQQQRL 234 (329)
T ss_pred hcCCC----------hHH-----------------------HHHHHHHHHHHHcCCcchhhhhhhC-CcccCCHHHHHHH
Confidence 22100 000 0011234566777775544555654 4557999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+||||++.+|+||||||||+|||+.+...+.+.|+++.+ +.|+++++|+.+++.+.||+|++|++|++++.|+++++
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l 311 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTI 311 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998753 46788899999999999999999999999999999887
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 312 ~ 312 (329)
T PRK14257 312 F 312 (329)
T ss_pred h
Confidence 3
No 385
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=325.46 Aligned_cols=201 Identities=26% Similarity=0.346 Sum_probs=165.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++++. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67888887652 24699999999999999999999999999999999998654 4899999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 756 QE----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLS-SEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 756 ~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..++.++|++|+..+++.+||+|++.+....+.. .....++.+++++++++.+|+.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245689999999888999999999876432211 11123334456889999999988776654 36999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~ 210 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDD 210 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999777899999999985 45566676
No 386
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.97 E-value=4e-32 Score=294.70 Aligned_cols=185 Identities=26% Similarity=0.425 Sum_probs=147.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccC--CCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHI--GEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~--~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. +.+||+||+.+......
T Consensus 27 ~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~-- 99 (213)
T cd03235 27 FLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHK-- 99 (213)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCcHHHHHHhcccccc--
Confidence 47999999999999999999999987 999999998764 2345799999997653 34899999987532110
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
..+... .. +....++++++.+||++..++.++ .||||||||++||||
T Consensus 100 ~~~~~~---~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~a 146 (213)
T cd03235 100 GLFRRL---SK-------------------------ADKAKVDEALERVGLSELADRQIG-----ELSGGQQQRVLLARA 146 (213)
T ss_pred ccccCC---CH-------------------------HHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHH
Confidence 000000 00 011235668888999876666554 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
|+.+|+++||||||+|||+.++..+.+.|+++++ .++++++++|+.+++.+.||++++|++| +++.|
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999865 3667888999999999999999999886 66554
No 387
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=8.1e-32 Score=342.33 Aligned_cols=193 Identities=28% Similarity=0.366 Sum_probs=162.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++|+++. .++++|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEc
Confidence 6899999998742 224699999999999999999999999999999999998764 489999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 824 (1245)
++ ..+++.+|||+|++.+++ -|++||+.+.. + .+ ++.++++++..|+.+. .||.+|..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 53 567889999999998876 59999997641 1 12 3346777887777653 36777754
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ ++|+|+++|+++ ..+.+|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~ 653 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADR 653 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCE
Confidence 3579999999999999999999999999999999999999999999876 589999999984 4466777
No 388
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.4e-31 Score=300.59 Aligned_cols=190 Identities=22% Similarity=0.312 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. +++..|+++|+.+......
T Consensus 37 ~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~ 113 (269)
T PRK13648 37 WTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHA 113 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcC
Confidence 47999999999999999999999987 999999998875432 2457999999974 6788899999988643211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +....++.+++.+||.+..+..++ .||||||||++||
T Consensus 114 ~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la 154 (269)
T PRK13648 114 V----------PYD------------------------EMHRRVSEALKQVDMLERADYEPN-----ALSGGQKQRVAIA 154 (269)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHHH
Confidence 0 000 001234568888999877665554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
||++.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.. +|++++|++|++++.|+++++.
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999988652 35677788999888875 9999999999999999987763
No 389
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.97 E-value=8.7e-32 Score=299.77 Aligned_cols=191 Identities=20% Similarity=0.287 Sum_probs=157.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC----------------cccceEEEeccccccCCCCCH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF----------------VPQRTAAYISQHDIHIGEMTV 64 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~~yv~Q~~~~~~~~Tv 64 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++..|+
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 104 (252)
T TIGR03005 28 KVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTV 104 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeEEEecCcccCCCCcH
Confidence 47999999999999999999999987 99999999877432 124579999999999999999
Q ss_pred HHHHHHHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccc
Q 000872 65 RETLAFSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRG 144 (1245)
Q Consensus 65 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 144 (1245)
.||+.++..... .. ... +....++++++.+|+.+..+..+ +.
T Consensus 105 ~~nl~~~~~~~~--~~-------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-----~~ 146 (252)
T TIGR03005 105 LDNVTEAPVLVL--GM-------ARA------------------------EAEKRAMELLDMVGLADKADHMP-----AQ 146 (252)
T ss_pred HHHHHHHHHHhc--CC-------CHH------------------------HHHHHHHHHHHHcCChhHhhcCh-----hh
Confidence 999987532100 00 000 00123456788899987666544 46
Q ss_pred cccccchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 145 ISGGQRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 145 LSGGqrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
||||||||++|||||+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++..++|++++|++|++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 225 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFAREFADRVCFFDKGRI 225 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999988653 367888899999999999999999999999
Q ss_pred EEecChhhH
Q 000872 225 VYQGPLEHV 233 (1245)
Q Consensus 225 v~~G~~~~~ 233 (1245)
++.|+.+++
T Consensus 226 ~~~g~~~~~ 234 (252)
T TIGR03005 226 VEQGKPDEI 234 (252)
T ss_pred EEeCCHHHH
Confidence 999988765
No 390
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.97 E-value=1e-31 Score=294.78 Aligned_cols=183 Identities=28% Similarity=0.377 Sum_probs=149.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-------cceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-------QRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|++||+.+...
T Consensus 38 ~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~ 114 (228)
T PRK10584 38 TIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPAL 114 (228)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHH
Confidence 47999999999999999999999887 9999999988754322 2469999999998999999999987543
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.+.. . .. +....++++++.+||.+..+..++ .||||||||+
T Consensus 115 ~~~~---~-------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Ge~qrl 155 (228)
T PRK10584 115 LRGE---S-------SR------------------------QSRNGAKALLEQLGLGKRLDHLPA-----QLSGGEQQRV 155 (228)
T ss_pred hcCC---C-------HH------------------------HHHHHHHHHHHHcCCHhHhhCChh-----hCCHHHHHHH
Confidence 2110 0 00 011235668889999877666554 5999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEe
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQ 227 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~ 227 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++. .+|++++|++|++++.
T Consensus 156 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 156 ALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNRE-HGTTLILVTHDLQLAA-RCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHH-hCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998653 3567777889988774 5999999999998753
No 391
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.2e-31 Score=296.49 Aligned_cols=200 Identities=22% Similarity=0.296 Sum_probs=158.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--R-GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~-~~~~G~i~~~g 751 (1245)
.+.++++++.+. .+.+|+|+|+.|+|||++||+|+||||||||+++|+|... + .+.+|+|.+||
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578899887652 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP----LRQALVGL 822 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~g~ 822 (1245)
.++.. ..+++.++|++|++.+++. ||.|++.+....+.. .+....++.+.++++.+|+.+ ..+.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~---- 178 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDK---- 178 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhC----
Confidence 87532 1345679999999888774 999999886543311 122333456778888888742 2222
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 823 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 823 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
....||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 179 -~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~ 250 (286)
T PRK14275 179 -NALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDY 250 (286)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCE
Confidence 2457999999999999999999999999999999999999999999999865 689999999986 44456676
No 392
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.6e-32 Score=300.11 Aligned_cols=190 Identities=20% Similarity=0.325 Sum_probs=151.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL--KASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+||||||||+++|+|..+|.. ..+|+|.++|.++... ..++.++|++|++.+++ +|++||+.+...
T Consensus 40 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 118 (258)
T PRK14268 40 VTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPR 118 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 479999999999999999999987410 1399999999886432 12456999999988777 899999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD----VCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1245)
..+. ...+ ....++++++.+|+. +..++. +..|||||
T Consensus 119 ~~~~----------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~ 159 (258)
T PRK14268 119 IHGA----------NKKD------------------------LDGVVENALRSAALWDETSDRLKSP-----ALSLSGGQ 159 (258)
T ss_pred HcCC----------CHHH------------------------HHHHHHHHHHHcCCCcchhhhhcCC-----hhhCCHHH
Confidence 2210 0000 012245677777774 233443 34699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++|||||+.+|+++||||||+|||+.++..+.+.|+++++ ++++++++|+.+++.+.||++++|++|++++.|+
T Consensus 160 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 236 (258)
T PRK14268 160 QQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQ 236 (258)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998853 4678889999999999999999999999999999
Q ss_pred hhhH
Q 000872 230 LEHV 233 (1245)
Q Consensus 230 ~~~~ 233 (1245)
++++
T Consensus 237 ~~~~ 240 (258)
T PRK14268 237 TRQI 240 (258)
T ss_pred HHHH
Confidence 8776
No 393
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.3e-32 Score=299.91 Aligned_cols=192 Identities=22% Similarity=0.315 Sum_probs=151.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL--KASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++ .+||+||+.++..
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~eni~~~~~ 113 (254)
T PRK14273 35 ITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF-LMSIYDNISYGPK 113 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc-cCcHHHHHHHHHH
Confidence 479999999999999999999998620 1389999999876421 1245799999998877 4899999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD----VCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1245)
..+. .. .. +..+.++..++.+|+. +..++.+ +.|||||
T Consensus 114 ~~~~---~~------~~------------------------~~~~~~~~~l~~~~l~~~l~~~~~~~~-----~~LSgG~ 155 (254)
T PRK14273 114 IHGT---KD------KK------------------------KLDEIVEQSLKKSALWNEVKDKLNTNA-----LSLSGGQ 155 (254)
T ss_pred hcCC---CC------HH------------------------HHHHHHHHHHHHhCCchhhHHHHhCCc-----ccCCHHH
Confidence 2210 00 00 0012244566666763 3344443 4699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++|||||+.+|+++||||||+|||+.++..+.+.|+++++ ++++++++|+.+++...+|++++|++|+++..|+
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 232 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE---SYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESS 232 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999853 4677889999999999999999999999999999
Q ss_pred hhhHH
Q 000872 230 LEHVE 234 (1245)
Q Consensus 230 ~~~~~ 234 (1245)
++++.
T Consensus 233 ~~~~~ 237 (254)
T PRK14273 233 TDELF 237 (254)
T ss_pred HHHHH
Confidence 88763
No 394
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=307.07 Aligned_cols=198 Identities=22% Similarity=0.236 Sum_probs=157.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC-ceeeEEEECCccCCCCcc-------cceEEEecccc--ccCCCCCHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL-KASGKVTYNGHDMHEFVP-------QRTAAYISQHD--IHIGEMTVRETLAF 70 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~--~~~~~~Tv~e~l~f 70 (1245)
+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++ .+.|.+|+.+++..
T Consensus 35 ~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~ 114 (326)
T PRK11022 35 VVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIME 114 (326)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHH
Confidence 479999999999999999999987421 248999999998754332 13699999997 47889999999876
Q ss_pred HHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccc
Q 000872 71 SARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqr 150 (1245)
....... ... .+.+..++++++.+||.+..+. -++....||||||
T Consensus 115 ~l~~~~~---------~~~------------------------~~~~~~~~~~L~~~gL~~~~~~--l~~~p~~LSgGq~ 159 (326)
T PRK11022 115 AIKVHQG---------GNK------------------------KTRRQRAIDLLNQVGIPDPASR--LDVYPHQLSGGMS 159 (326)
T ss_pred HHHHhcC---------CCH------------------------HHHHHHHHHHHHHCCCCChHHH--HhCCchhCCHHHH
Confidence 5432100 000 0112345678899999752110 1234456999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
|||+|||||+.+|++||+||||+|||+.++.++++.|+++.+. .+.++++++|+.+.+..++|+|++|++|++++.|+.
T Consensus 160 QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~ 238 (326)
T PRK11022 160 QRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKA 238 (326)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999998764 366788899999999999999999999999999998
Q ss_pred hhHH
Q 000872 231 EHVE 234 (1245)
Q Consensus 231 ~~~~ 234 (1245)
+++.
T Consensus 239 ~~~~ 242 (326)
T PRK11022 239 HDIF 242 (326)
T ss_pred HHHh
Confidence 8874
No 395
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.3e-32 Score=297.03 Aligned_cols=185 Identities=21% Similarity=0.361 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|..+|+ +|+|.++|.++.... .++.++|++|++.+++ .||+||+.+......
T Consensus 31 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~- 105 (241)
T PRK14250 31 IYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKG- 105 (241)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhcC-
Confidence 47999999999999999999999887 999999998865322 2457999999988776 699999986432110
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccchhhHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ....++++++.+||+ +..+.. +..||||||||++||
T Consensus 106 -----------~--------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~la 143 (241)
T PRK14250 106 -----------E--------------------------KNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSIA 143 (241)
T ss_pred -----------c--------------------------HHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHH
Confidence 0 001235577888886 344443 346999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||++.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.+.||++++|++|+++..|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (241)
T PRK14250 144 RTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDF 219 (241)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999988653 356788899999999999999999999999999988765
No 396
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=4.8e-32 Score=337.20 Aligned_cols=196 Identities=29% Similarity=0.445 Sum_probs=160.7
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++|+|+++.++. ++++|+|+|++++|||++||+||||||||||++.|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 46999999998742 34699999999999999999999999999999999997664 48999999988
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-------CcccccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVE-------LNPLRQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-------l~~~~~~~~g~~ 823 (1245)
++. ..+++.++||+|+..++. -|++||+.++. .+.++++ ++++++..+ +.+..||.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecCC
Confidence 654 567889999999998887 79999998752 1223322 333333332 233568889844
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++||||+++||+||+||||||+||+.++..|++.++++. +++|+++++|+++ .+ ...|+
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls-ti-~~aD~ 532 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS-TI-KNADR 532 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh-HH-HhCCE
Confidence 45699999999999999999999999999999999999999999999876 5789999999995 33 33676
No 397
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=1.2e-31 Score=300.35 Aligned_cols=192 Identities=26% Similarity=0.338 Sum_probs=155.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc------ccceEEEecccc--ccCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV------PQRTAAYISQHD--IHIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~ 72 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+.+.+||+||+.+..
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 115 (265)
T TIGR02769 39 TVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPL 115 (265)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHH
Confidence 47999999999999999999999987 999999998875432 235699999986 4667899999998654
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccch
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrq 151 (1245)
.... . .... +....++++++.+||. +..+..+ ..|||||||
T Consensus 116 ~~~~--~-------~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~~LSgGe~q 157 (265)
T TIGR02769 116 RHLT--S-------LDES------------------------EQKARIAELLDMVGLRSEDADKLP-----RQLSGGQLQ 157 (265)
T ss_pred HHhc--C-------CCHH------------------------HHHHHHHHHHHHcCCChhhhhCCh-----hhCCHHHHH
Confidence 2110 0 0000 0112356688889996 4555544 459999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|++++|+.+.+..+||++++|++|++++.|+.+
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999998653 3667888999999999999999999999999999988
Q ss_pred hHH
Q 000872 232 HVE 234 (1245)
Q Consensus 232 ~~~ 234 (1245)
++.
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 763
No 398
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.97 E-value=1.1e-31 Score=295.19 Aligned_cols=185 Identities=26% Similarity=0.350 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEec-cccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--VPQRTAAYIS-QHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++.+|++||+.+.....+.
T Consensus 49 ~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~ 125 (236)
T cd03267 49 IVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDL 125 (236)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCC
Confidence 47999999999999999999999987 99999999875332 2245799997 556778899999999876543211
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
. .. +....++.+++.+||++..++.++ .||||||||++||+
T Consensus 126 ~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~ 166 (236)
T cd03267 126 P----------PA------------------------RFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAA 166 (236)
T ss_pred C----------HH------------------------HHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHH
Confidence 0 00 011234567888999888887665 49999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
||+.+|++++|||||+|||+.++..+.+.|+++++. ++.+|++++|+.+++...||++++|++|++++.|
T Consensus 167 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 167 ALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999998653 3567888999999999999999999999998765
No 399
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.8e-31 Score=280.27 Aligned_cols=152 Identities=32% Similarity=0.429 Sum_probs=133.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc-----ccccceEEEEccCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ-----ETFTRISGYCEQNDIHSPY 775 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~-----~~~~~~~~~v~q~~~~~~~ 775 (1245)
+.+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++..++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 3599999999999999999999999999999999998654 48999999987542 2356779999999888888
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000872 776 VTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 855 (1245)
Q Consensus 776 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpT 855 (1245)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999988532 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 856 SGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 856 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||+.++..+.+.|++++++ |+|+|+++|++. .+.+..|+
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~ 170 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADR 170 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 999999999999999999876 899999999975 34445555
No 400
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.8e-31 Score=293.41 Aligned_cols=202 Identities=17% Similarity=0.198 Sum_probs=160.7
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+..+.+++.+ +++.+|+|+|+.++|||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 8 ~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 74 (261)
T PRK14263 8 VMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLG 74 (261)
T ss_pred eEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECC
Confidence 46666666544 2346999999999999999999999999999999999976431 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..++ .+|+.||+.+....+. ...+..+.++++++.+++.+..+...+ ...+
T Consensus 75 ~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 148 (261)
T PRK14263 75 QDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR----YKGDLGDRVKHALQGAALWDEVKDKLK-VSGL 148 (261)
T ss_pred EeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC----chHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87632 23456799999998777 5999999988765432 112334568889999998653322222 2345
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+..|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~ 217 (261)
T PRK14263 149 SLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADT 217 (261)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCE
Confidence 799999999999999999999999999999999999999999999985 4799999999986 45566676
No 401
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.8e-31 Score=300.12 Aligned_cols=190 Identities=29% Similarity=0.405 Sum_probs=155.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccc-cCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDI-HIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|.++... ..++.++|++|++. .+...||+||+.++...
T Consensus 30 ~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~ 106 (275)
T PRK13639 30 MVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLN 106 (275)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHH
Confidence 47999999999999999999999987 99999999887421 12457999999863 34457999999875421
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.+. ... +....+.++++.+||.+..++.++ .||||||||++
T Consensus 107 ~~~----------~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~-----~LS~Gq~qrv~ 147 (275)
T PRK13639 107 LGL----------SKE------------------------EVEKRVKEALKAVGMEGFENKPPH-----HLSGGQKKRVA 147 (275)
T ss_pred cCC----------CHH------------------------HHHHHHHHHHHHCCCchhhcCChh-----hCCHHHHHHHH
Confidence 110 000 011234568889999877776655 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+.+|++++|+.+++...||++++|++|++++.|+++++.
T Consensus 148 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~--~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 148 IAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK--EGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999865 3677888999999999999999999999999999988763
No 402
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.2e-31 Score=287.46 Aligned_cols=166 Identities=42% Similarity=0.764 Sum_probs=138.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--cccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--VPQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+||||||||||+++|+|.++|....+|+|.++|.++... ..++.++|++|++.+++.+||+||+.++....
T Consensus 35 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--- 111 (202)
T cd03233 35 MVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--- 111 (202)
T ss_pred EEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc---
Confidence 4799999999999999999999982112399999999887543 23467999999999999999999998753210
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
.+..+..||||||||++||||
T Consensus 112 -----------------------------------------------------------~~~~~~~LS~Ge~qrl~lara 132 (202)
T cd03233 112 -----------------------------------------------------------GNEFVRGISGGERKRVSIAEA 132 (202)
T ss_pred -----------------------------------------------------------cccchhhCCHHHHHHHHHHHH
Confidence 012234599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEec
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQG 228 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G 228 (1245)
|+.+|+++||||||+|||+.++..+.+.++++++..+.++++++||+.+++.+.||++++|++|++++.|
T Consensus 133 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 133 LVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999999999875434556666777778999999999999999998765
No 403
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=2.3e-31 Score=333.11 Aligned_cols=196 Identities=23% Similarity=0.329 Sum_probs=164.3
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|+++.++. ++++|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 36899999998741 13599999999999999999999999999999999998765 48999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 823 (1245)
+++ ..+++.++||+|++.+++. |++||+.++. +. .++.++++++.+|+.+. .||.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~----~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DI----SEEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CC----CHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4678899999999999875 9999998742 11 23447788888887653 35666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
...||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+++|+|+ ....+|+.
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~i 544 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTI 544 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEE
Confidence 356999999999999999999999999999999999999999999998864 699999999984 45667773
No 404
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.5e-31 Score=294.24 Aligned_cols=191 Identities=26% Similarity=0.426 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|++||+.+.....+..
T Consensus 27 ~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~- 102 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVD- 102 (235)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCC-
Confidence 47999999999999999999999987 999999998875432 2457999999999999999999998764321100
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.. +....++++++.+||.+..++.+. .||||||||++||||+
T Consensus 103 ---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral 144 (235)
T cd03299 103 ---------KK------------------------EIERKVLEIAEMLGIDHLLNRKPE-----TLSGGEQQRVAIARAL 144 (235)
T ss_pred ---------HH------------------------HHHHHHHHHHHHcCChhHHhcCcc-----cCCHHHHHHHHHHHHH
Confidence 00 011224567888999877776654 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|++++|||||+|||+.++.++.+.|++++.. .++++++++|+.+++.+.||++++|++|++++.|+++++.
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 218 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKE-FGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVF 218 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999998653 2567888999999999999999999999999999877653
No 405
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=302.50 Aligned_cols=190 Identities=26% Similarity=0.349 Sum_probs=156.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC----cccceEEEeccccc-cCCCCCHHHHHHHHHhcc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF----VPQRTAAYISQHDI-HIGEMTVRETLAFSARCQ 75 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~ 75 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+...||.||+.|+....
T Consensus 38 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~ 114 (280)
T PRK13633 38 FLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL 114 (280)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc
Confidence 47999999999999999999999987 99999999887542 12467999999874 234569999999865321
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
+.. .. +..+.++++++.+||++..++.++ .||||||||++|
T Consensus 115 ~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~G~~qrv~l 155 (280)
T PRK13633 115 GIP----------PE------------------------EIRERVDESLKKVGMYEYRRHAPH-----LLSGGQKQRVAI 155 (280)
T ss_pred CCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhCCcc-----cCCHHHHHHHHH
Confidence 100 00 012235678899999887777665 599999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.. ||++++|++|++++.|+++++.
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999999998653 36678888999998876 9999999999999999988764
No 406
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.97 E-value=9.7e-32 Score=301.00 Aligned_cols=201 Identities=22% Similarity=0.346 Sum_probs=158.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC--------cccceEEEeccccccCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF--------VPQRTAAYISQHDIHIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~--------~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~ 72 (1245)
+++|+||||||||||+++|+|.++|+...+|+|.++|.++... ..++.++|++|++.+++.+||+||+.+..
T Consensus 32 ~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~ 111 (262)
T PRK09984 32 MVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGA 111 (262)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhh
Confidence 4799999999999999999999987522369999999876432 11356899999999999999999998753
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchh
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKR 152 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1245)
.... ... ... .... ..+.+..++++++.+||++..+..++ .||||||||
T Consensus 112 ~~~~--~~~------~~~---~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 160 (262)
T PRK09984 112 LGST--PFW------RTC---FSWF---------------TREQKQRALQALTRVGMVHFAHQRVS-----TLSGGQQQR 160 (262)
T ss_pred cccc--cch------hhh---cccc---------------cHHHHHHHHHHHHHcCCHHHHhCCcc-----ccCHHHHHH
Confidence 2100 000 000 0000 00112345678899999877776555 599999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhh
Q 000872 153 VTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 153 v~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~ 232 (1245)
++|||||+.+|++|||||||+|||+.++..+.+.|+++++. +++++++++|+.+++...||++++|++|++++.|++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~ 239 (262)
T PRK09984 161 VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239 (262)
T ss_pred HHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998753 36788889999999999999999999999999998776
Q ss_pred H
Q 000872 233 V 233 (1245)
Q Consensus 233 ~ 233 (1245)
+
T Consensus 240 ~ 240 (262)
T PRK09984 240 F 240 (262)
T ss_pred h
Confidence 4
No 407
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=1.8e-31 Score=331.29 Aligned_cols=197 Identities=27% Similarity=0.418 Sum_probs=164.4
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36999999998731 123599999999999999999999999999999999998664 48999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc------ccccccCCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL------RQALVGLPG 824 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~------~~~~~g~~~ 824 (1245)
.++ ..+++.++||+|+..+++ -|++||+.++. + + ..++.++++++..++.+. .||.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~----~~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-N----ASDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-c----cCHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 653 456788999999998876 59999997642 1 1 223457888888888754 35667654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|++.. +++|+|+++|+++. ...+|+
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~ 542 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDR 542 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCE
Confidence 45699999999999999999999999999999999999999999999885 58999999999963 345776
No 408
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.7e-31 Score=297.25 Aligned_cols=197 Identities=23% Similarity=0.335 Sum_probs=154.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhcc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQ 75 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~ 75 (1245)
+++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.+||+||+.++....
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~ 110 (250)
T PRK14247 31 ITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLN 110 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhc
Confidence 47999999999999999999998741 124999999998875422 2457999999998889999999999865321
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTT 155 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~i 155 (1245)
.... ... +..+.++++++.+||.+..+... +..+.+||||||||++|
T Consensus 111 ~~~~--------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgG~~qrv~l 157 (250)
T PRK14247 111 RLVK--------SKK------------------------ELQERVRWALEKAQLWDEVKDRL-DAPAGKLSGGQQQRLCI 157 (250)
T ss_pred cccC--------CHH------------------------HHHHHHHHHHHHcCCCcchhhhh-cCCcccCCHHHHHHHHH
Confidence 1000 000 01123456788888854211111 23345699999999999
Q ss_pred HHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 156 GEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 156 a~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||||+.+|++++|||||+|||+.++..+.+.|+++++ ++++++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 158 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 158 ARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999998753 46788899999999999999999999999999998776
No 409
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2e-31 Score=292.88 Aligned_cols=190 Identities=26% Similarity=0.383 Sum_probs=158.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc-ccceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV-PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|+++.... .++.++|++|++.+++.+|++||+.+.....+..
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~- 103 (232)
T cd03300 28 FFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKKLP- 103 (232)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHHHHHHHHHHhcCCC-
Confidence 47999999999999999999999987 999999998875432 2457999999999888999999998765322100
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
.. .....++.+++.+||.+..++.+. .||||||||++|||||
T Consensus 104 ---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral 145 (232)
T cd03300 104 ---------KA------------------------EIKERVAEALDLVQLEGYANRKPS-----QLSGGQQQRVAIARAL 145 (232)
T ss_pred ---------HH------------------------HHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHH
Confidence 00 011234668888999877766554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+.+|++++|||||+|||+.++..+.+.|++++.. .+.+|++++|+..++.+.||++++|++|++++.|+.+++
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~ 218 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKE-LGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEI 218 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999998753 356777789999999999999999999999999987665
No 410
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.3e-31 Score=325.15 Aligned_cols=202 Identities=26% Similarity=0.302 Sum_probs=165.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 377888887652 23699999999999999999999999999999999998654 489999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhcC-CCC---CCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 755 NQE----TFTRISGYCEQNDIHSPYVTVYESLLYSAWLRL-SSE---VNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 755 ~~~----~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~-~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
... ..++.++|++|+..+++.+||+|++.+...... ... ...++.+++++++++.+|+.+..+..+ +
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 432 123568999999988899999999987532110 001 122344567889999999987776654 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+-+..|+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~ 214 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDR 214 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 69999999999999999999999999999999999999999999999877999999999975 44455676
No 411
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.97 E-value=6.7e-32 Score=293.20 Aligned_cols=180 Identities=22% Similarity=0.363 Sum_probs=148.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHhc-
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSARC- 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~- 74 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|++||+.++...
T Consensus 28 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~ 104 (213)
T cd03262 28 VVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKV 104 (213)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHh
Confidence 47999999999999999999999887 99999999877421 1246799999999989999999999875421
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
+.. ... +..+.++++++.+||++..+..+. .||||||||++
T Consensus 105 ~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ 145 (213)
T cd03262 105 KGM----------SKA------------------------EAEERALELLEKVGLADKADAYPA-----QLSGGQQQRVA 145 (213)
T ss_pred cCC----------CHH------------------------HHHHHHHHHHHHcCCHhHhhhCcc-----ccCHHHHHHHH
Confidence 100 000 011234567888899876666554 59999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++ .++++++++|+.+++.+.||++++|++|++
T Consensus 146 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 146 IARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999999875 356788899999999999999999999974
No 412
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.7e-31 Score=292.64 Aligned_cols=204 Identities=23% Similarity=0.315 Sum_probs=159.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--C-eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR--G-YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~--~-~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++|++||++||+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 377888887762 23599999999999999999999999999999999997641 1 2589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++......... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 146 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLD-RNAQ 146 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhc-cChh
Confidence 87532 234567999999988776 799999987643321 11222334567888999998532111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 147 ~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~ 215 (251)
T PRK14251 147 AFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQ 215 (251)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCE
Confidence 7999999999999999999999999999999999999999999999854 799999999986 44555676
No 413
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=302.58 Aligned_cols=193 Identities=24% Similarity=0.341 Sum_probs=156.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|.++|....+|+|.++|.++.... .++.++|++|++. .++..||+||+.|.....+
T Consensus 35 ~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~ 114 (282)
T PRK13640 35 WTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRA 114 (282)
T ss_pred EEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCC
Confidence 47999999999999999999999886112399999999875432 2357999999974 6778999999987543211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +..+.++++++.+||.+..++.+ +.||||||||++||
T Consensus 115 ~----------~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~~qrv~la 155 (282)
T PRK13640 115 V----------PRP------------------------EMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQKQRVAIA 155 (282)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHH
Confidence 0 000 01123566889999987766555 46999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..||++++|++|++++.|+++++.
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999998653 356778889998887 579999999999999999988763
No 414
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.7e-31 Score=295.64 Aligned_cols=204 Identities=21% Similarity=0.268 Sum_probs=158.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--R-GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~-~~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478899987663 2359999999999999999999999999999999999642 1 13589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++. |+.|++.+...... .......++.++++++.+++.+....... ....
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 163 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLH-SSAL 163 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHh-cCcc
Confidence 87642 1345679999999888874 99999987643221 11222334557788888888521111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 164 ~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~ 232 (268)
T PRK14248 164 SLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDR 232 (268)
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999865 689999999986 45566676
No 415
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.97 E-value=6.8e-31 Score=293.50 Aligned_cols=200 Identities=24% Similarity=0.244 Sum_probs=158.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee-
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP- 753 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~- 753 (1245)
.++++|+++.++ ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 478888887653 23599999999999999999999999999999999998654 48999999986
Q ss_pred ----CCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000872 754 ----KNQE---T----FTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQAL 819 (1245)
Q Consensus 754 ----~~~~---~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 819 (1245)
+... . .++.++|++|+.. +.+.+|+.|++.+...... .....+.++.+.++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2446899999974 5677899999876432111 1122234556789999999963 44433
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 820 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 820 ~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+.+..|+
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~ 221 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHR 221 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCE
Confidence 3469999999999999999999999999999999999999999999998764 899999999986 33345565
No 416
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=4e-32 Score=263.09 Aligned_cols=190 Identities=21% Similarity=0.311 Sum_probs=159.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc----------------ccceEEEeccccccCCCCCH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV----------------PQRTAAYISQHDIHIGEMTV 64 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~----------------~~~~~~yv~Q~~~~~~~~Tv 64 (1245)
++.|+|.|||||||+|++|.=+..|. .|.|.+||..+.... .+.+.++|+|+..++..+||
T Consensus 34 VisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtv 110 (256)
T COG4598 34 VISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTV 110 (256)
T ss_pred EEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHH
Confidence 36899999999999999999888887 999999998763110 12357999999999999999
Q ss_pred HHHHHHHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccc
Q 000872 65 RETLAFSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRG 144 (1245)
Q Consensus 65 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 144 (1245)
.||+.-+.. + +... ...++.+.++..|...||.+..|.+.. .
T Consensus 111 LeNViEaPv-h--------VLg~------------------------~k~ea~e~Ae~~L~kVGi~ek~~~YP~-----~ 152 (256)
T COG4598 111 LENVIEAPV-H--------VLGV------------------------SKAEAIERAEKYLAKVGIAEKADAYPA-----H 152 (256)
T ss_pred HHHHHhcch-H--------hhcC------------------------CHHHHHHHHHHHHHHhCchhhhhcCcc-----c
Confidence 999975321 1 0000 111233456778999999999887665 4
Q ss_pred cccccchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcE
Q 000872 145 ISGGQRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQI 224 (1245)
Q Consensus 145 LSGGqrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~i 224 (1245)
|||||+||++|||||+.+|+++++|||||+|||.-.-++++.+++++. .++|++++||.+..+.+...+|+.|++|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAe--EgrTMv~VTHEM~FAR~Vss~v~fLh~G~i 230 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAE--EGRTMVVVTHEMGFARDVSSHVIFLHQGKI 230 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHH--hCCeEEEEeeehhHHHhhhhheEEeeccee
Confidence 999999999999999999999999999999999999999999999987 477888899999999999999999999999
Q ss_pred EEecChhhH
Q 000872 225 VYQGPLEHV 233 (1245)
Q Consensus 225 v~~G~~~~~ 233 (1245)
-++|+++++
T Consensus 231 EE~G~P~qv 239 (256)
T COG4598 231 EEEGPPEQV 239 (256)
T ss_pred cccCChHHH
Confidence 999999987
No 417
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.4e-31 Score=291.63 Aligned_cols=204 Identities=24% Similarity=0.331 Sum_probs=158.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CC-eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--RG-YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~~-~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|+++++||++||+|+||||||||+++|+|..+ +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 477888887652 2359999999999999999999999999999999999643 21 2489999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++ .|+.|++.+....+.. ...+..++.+.+.++.+++......... ....
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLH-ESAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHh-cCcc
Confidence 87632 234567999999988887 6999999876543321 1122223456777888877421111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. .+.+..|+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~ 216 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDK 216 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999865 589999999986 45556676
No 418
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.97 E-value=1.4e-31 Score=330.79 Aligned_cols=196 Identities=27% Similarity=0.428 Sum_probs=162.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++++++. .++++|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 320 ~i~~~~v~f~y~~-----------~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~I~~~g~~i 386 (529)
T TIGR02857 320 SLEFSGLSVAYPG-----------RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDP--TEGSIAVNGVPL 386 (529)
T ss_pred eEEEEEEEEECCC-----------CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEeh
Confidence 6899999998742 123699999999999999999999999999999999998764 489999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 824 (1245)
++ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+. .||.+|..
T Consensus 387 ~~~~~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~- 455 (529)
T TIGR02857 387 ADADADSWRDQIAWVPQHPFLFA-GTIAENIRLAR----P-DAS----DAEIRRALERAGLDEFVAALPQGLDTLIGEG- 455 (529)
T ss_pred hhCCHHHHHhheEEEcCCCcccC-cCHHHHHhccC----C-CCC----HHHHHHHHHHcCcHHHHHhCcccccchhccc-
Confidence 43 456788999999998886 59999997642 1 112 2346777777777643 36667654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++|||+|+++|++++||||||+||+.++..+.+.|+++. +++|+|+++|+++ ....+|+
T Consensus 456 g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ 525 (529)
T TIGR02857 456 GAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLA--LAERADR 525 (529)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHH--HHHhCCE
Confidence 34699999999999999999999999999999999999999999999875 5899999999984 3456675
No 419
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.97 E-value=2.6e-31 Score=295.99 Aligned_cols=195 Identities=23% Similarity=0.313 Sum_probs=158.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++|+++.+.. +...+|+|+|+.|++||+++|+|+||||||||+++|+|..+ .+|+|.+||.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4778999887631 12358999999999999999999999999999999999864 379999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGL------PGV 825 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~------~~~ 825 (1245)
.. ..+++.++|++|++.+++ .|++||+.+.. ... ++.+++.++.+||.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345678999999998887 49999995321 111 23467888899998765554331 134
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..||||||||++|||+|+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|++. .+. ..|+
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~-~~dr 205 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AML-ECQR 205 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HHH-hCCE
Confidence 5699999999999999999999999999999999999999999999875 4899999999984 343 3676
No 420
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=2.5e-31 Score=271.16 Aligned_cols=190 Identities=23% Similarity=0.347 Sum_probs=171.7
Q ss_pred ccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcccccceEEEEccCCCCCCCC
Q 000872 697 HDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQETFTRISGYCEQNDIHSPYV 776 (1245)
Q Consensus 697 ~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~~~~~~~~~v~q~~~~~~~l 776 (1245)
+.+++.+++|+||.++||+++|++|+|||||||++++|.|...+ .+|+|.++|.+.+.. .+.++||.|.+--+++.+
T Consensus 11 ~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~ 87 (300)
T COG4152 11 SFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKM 87 (300)
T ss_pred ccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhhh-hhhhcccChhhhccCccC
Confidence 34667899999999999999999999999999999999998765 489999999987653 456789999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000872 777 TVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 856 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTs 856 (1245)
||.|.|.|-|.|+ +++.++..+.+...|+.+++.......+ +.||-|++|++-+-.+++++|.+++||||.|
T Consensus 88 tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFS 159 (300)
T COG4152 88 TVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFS 159 (300)
T ss_pred cHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCcc
Confidence 9999999999988 5677888888999999999998876654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 857 GLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 857 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
|||+.+.+.+-+.+.+++++|.|||.++|+.. .+-++.|+.
T Consensus 160 GLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~l 200 (300)
T COG4152 160 GLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRL 200 (300)
T ss_pred CCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhh
Confidence 99999999999999999999999999999976 556778873
No 421
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.2e-31 Score=303.99 Aligned_cols=190 Identities=21% Similarity=0.336 Sum_probs=152.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCC--------CcccceEEEeccccc-cCCCCCHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHE--------FVPQRTAAYISQHDI-HIGEMTVRETLAFS 71 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~--------~~~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~ 71 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ...++.++|++|++. .+...|++||+.|+
T Consensus 39 ~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~ 115 (289)
T PRK13645 39 VTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFG 115 (289)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHH
Confidence 47999999999999999999999887 9999999987632 112457999999863 23346999999886
Q ss_pred HhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccc
Q 000872 72 ARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQR 150 (1245)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqr 150 (1245)
....+. ... +....++.+++.++|+ +..++.+ +.||||||
T Consensus 116 ~~~~~~----------~~~------------------------~~~~~~~~ll~~~~L~~~~~~~~~-----~~LS~Gq~ 156 (289)
T PRK13645 116 PVNLGE----------NKQ------------------------EAYKKVPELLKLVQLPEDYVKRSP-----FELSGGQK 156 (289)
T ss_pred HHHcCC----------CHH------------------------HHHHHHHHHHHHcCCChhHhcCCh-----hhCCHHHH
Confidence 432110 000 0012245677888985 4555444 45999999
Q ss_pred hhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 151 KRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 151 qRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++...||++++|++|++++.|+.
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988653 366788899999999999999999999999999998
Q ss_pred hhH
Q 000872 231 EHV 233 (1245)
Q Consensus 231 ~~~ 233 (1245)
+++
T Consensus 236 ~~~ 238 (289)
T PRK13645 236 FEI 238 (289)
T ss_pred HHH
Confidence 775
No 422
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=99.97 E-value=6.1e-31 Score=322.25 Aligned_cols=203 Identities=22% Similarity=0.328 Sum_probs=163.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 45677777652 24699999999999999999999999999999999998654224899999998764
Q ss_pred ccc----ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCC
Q 000872 756 QET----FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSS-EVNSKTREMFVEEVMELVELNPLR-QALVGLPGVNGLS 829 (1245)
Q Consensus 756 ~~~----~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~g~~~~~~lS 829 (1245)
... .++.++|++|++.+++.+||.|++.+....+... ....++.+++++++++.+|+.+.. +.. ++.||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 321 2356899999998889999999998764332111 112334456788999999997653 333 34699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~ 210 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDT 210 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999999999878999999999975 44456676
No 423
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.97 E-value=4.7e-31 Score=278.23 Aligned_cols=152 Identities=26% Similarity=0.441 Sum_probs=133.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCC---CCCCC
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQND---IHSPY 775 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~---~~~~~ 775 (1245)
+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 79999999999999999999999999999999998654 489999999876432 2456799999984 57788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000872 776 VTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 855 (1245)
Q Consensus 776 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpT 855 (1245)
+|++|++.+... ||||||||++||++|+.+|++++|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976421 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 856 SGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 856 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+|||+.++..+.+.|+++.++|+|+|+++|+++ ++.+..|+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~ 173 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDR 173 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 999999999999999998767899999999975 45555565
No 424
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.7e-31 Score=322.01 Aligned_cols=202 Identities=29% Similarity=0.363 Sum_probs=165.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 377888887652 23599999999999999999999999999999999998654 489999999876
Q ss_pred Cc----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQ----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
.. ..+++.++|++|+..+++.+||.|++.+....+........+.+++++++++.+|+.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 42 1235679999999988899999999987532111111123344567889999999986655543 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~ 209 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDA 209 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999877999999999986 44455676
No 425
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2e-31 Score=297.15 Aligned_cols=197 Identities=21% Similarity=0.336 Sum_probs=153.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCC--C---cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHE--F---VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++.. . ..++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (253)
T PRK14267 32 VFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVK 111 (253)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHH
Confidence 47999999999999999999998762 1238999999988742 1 124579999999999999999999988653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.+..... .. +....++++++.+||........ +..+..||||||||+
T Consensus 112 ~~~~~~~--------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv 158 (253)
T PRK14267 112 LNGLVKS--------KK------------------------ELDERVEWALKKAALWDEVKDRL-NDYPSNLSGGQRQRL 158 (253)
T ss_pred hcCccCC--------HH------------------------HHHHHHHHHHHHcCCccchhhhh-ccChhhCCHHHHHHH
Confidence 2210000 00 00112455677777743211111 233456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.++++++|+.+++...||++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK---EYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999853 36788899999999999999999999999999998776
No 426
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=99.97 E-value=2.2e-31 Score=298.35 Aligned_cols=192 Identities=21% Similarity=0.262 Sum_probs=155.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccc--cCCCCCHHHHHHHHHhcc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDI--HIGEMTVRETLAFSARCQ 75 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~--~~~~~Tv~e~l~f~~~~~ 75 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +.+.+|+.|++.+.....
T Consensus 41 ~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~ 117 (267)
T PRK15112 41 TLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN 117 (267)
T ss_pred EEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc
Confidence 47999999999999999999999987 9999999988753221 246999999874 567889999998754321
Q ss_pred CCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccccccccccchhhH
Q 000872 76 GVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD-VCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.. . ... +....++++++.+||. +..+..+ ..||||||||++
T Consensus 118 ~~---~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G~~qrv~ 159 (267)
T PRK15112 118 TD---L------EPE------------------------QREKQIIETLRQVGLLPDHASYYP-----HMLAPGQKQRLG 159 (267)
T ss_pred cC---C------CHH------------------------HHHHHHHHHHHHcCCChHHHhcCc-----hhcCHHHHHHHH
Confidence 10 0 000 0112356688899994 4555444 459999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
||+||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..+||++++|++|++++.|+++++.
T Consensus 160 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 160 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVL 238 (267)
T ss_pred HHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHh
Confidence 999999999999999999999999999999999998653 3567888999999999999999999999999999887663
No 427
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.97 E-value=2.9e-31 Score=294.45 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=155.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCC--CCCCceeeEEEECCccCCCCcc----cceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKL--DSSLKASGKVTYNGHDMHEFVP----QRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+|||||||||||++|+|.. +|+ +|+|.++|+++..... +..++|++|++.+++.+|++||+.+....
T Consensus 28 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~ 104 (243)
T TIGR01978 28 IHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNA 104 (243)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHH
Confidence 47999999999999999999995 566 9999999988754322 23489999999999999999999875432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc-cccccccCccccccccccchhh
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV-CADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
........ . . + ..+....++.+++.+||++ ..+..++ .+||||||||+
T Consensus 105 ~~~~~~~~---~----------~---~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl 153 (243)
T TIGR01978 105 RRSARGEE---P----------L---D-----------LLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRN 153 (243)
T ss_pred hhcccccc---c----------c---c-----------HHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHH
Confidence 10000000 0 0 0 0011224567888999974 4554443 14999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhh-ccceEEecCCcEEEecChhh
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNL-FDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~-~D~v~vl~~G~iv~~G~~~~ 232 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++... ||++++|++|++++.|++++
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVEL 231 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHH
Confidence 999999999999999999999999999999999999864 356788899999999888 89999999999999999875
Q ss_pred HH
Q 000872 233 VE 234 (1245)
Q Consensus 233 ~~ 234 (1245)
+.
T Consensus 232 ~~ 233 (243)
T TIGR01978 232 AK 233 (243)
T ss_pred hc
Confidence 53
No 428
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.97 E-value=2.7e-31 Score=289.95 Aligned_cols=196 Identities=26% Similarity=0.404 Sum_probs=155.4
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.+.. ..+.+|+|+|+.+++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhH
Confidence 567787765421 123599999999999999999999999999999999998653 4899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000872 756 Q---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVG------LPGVN 826 (1245)
Q Consensus 756 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g------~~~~~ 826 (1245)
. ..+++.++|++|+..+++ .|+.|++.+... ... .+.++++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567899999988776 699999875321 111 2345678888888776655431 11235
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++.. . +..|+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~-~-~~~d~ 207 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL-L-DLVDR 207 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH-H-HhCCE
Confidence 79999999999999999999999999999999999999999999998754 899999999863 3 56665
No 429
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=99.97 E-value=2e-31 Score=290.56 Aligned_cols=190 Identities=26% Similarity=0.364 Sum_probs=152.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcccceEEEeccccccC--CCCCHHHHHHHHHhccCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVPQRTAAYISQHDIHI--GEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~--~~~Tv~e~l~f~~~~~~~~ 78 (1245)
+++|+|+||||||||+++|+|..+|+ +|+|.++|+++.. .++.++|++|++.++ ..+|++||+.++.... .
T Consensus 8 ~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~-~- 80 (223)
T TIGR03771 8 LLGLLGPNGAGKTTLLRAILGLIPPA---KGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGRTGH-I- 80 (223)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhccccc-c-
Confidence 47999999999999999999999987 9999999987642 245699999998654 3489999998753210 0
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
..... ... .....++++++.+||++..++.++ .||||||||++||||
T Consensus 81 ~~~~~---~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~lara 127 (223)
T TIGR03771 81 GWLRR---PCV-------------------------ADFAAVRDALRRVGLTELADRPVG-----ELSGGQRQRVLVARA 127 (223)
T ss_pred ccccC---CcH-------------------------HHHHHHHHHHHHhCCchhhcCChh-----hCCHHHHHHHHHHHH
Confidence 00000 000 001235668889999877766655 599999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|+.+|+++||||||+|||+.++..+.+.|+++++ .++++++++|+.+++.+.||+++++ +|++++.|+.+++
T Consensus 128 l~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~--~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~ 199 (223)
T TIGR03771 128 LATRPSVLLLDEPFTGLDMPTQELLTELFIELAG--AGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQL 199 (223)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHh
Confidence 9999999999999999999999999999998864 3667888999999999999999999 8999999988765
No 430
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-31 Score=299.39 Aligned_cols=195 Identities=24% Similarity=0.396 Sum_probs=157.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++..|++||+.++.....
T Consensus 35 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~- 110 (265)
T PRK10253 35 FTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQ- 110 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCccccc-
Confidence 47999999999999999999999887 999999998775432 23569999999998889999999986421000
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
...... .. .....++++++.+||.+..++.+. .||||||||++|||
T Consensus 111 -~~~~~~---~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lar 156 (265)
T PRK10253 111 -PLFTRW---RK-------------------------EDEEAVTKAMQATGITHLADQSVD-----TLSGGQRQRAWIAM 156 (265)
T ss_pred -ccccCC---CH-------------------------HHHHHHHHHHHHcCCHHHhcCCcc-----cCChHHHHHHHHHH
Confidence 000000 00 001234668888999876665554 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|++.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+..++.++||++++|++|++++.|+++++.
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999998652 3567888999999999999999999999999999987753
No 431
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.5e-31 Score=299.61 Aligned_cols=194 Identities=22% Similarity=0.332 Sum_probs=156.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|+.||+.++.... .
T Consensus 39 ~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~-~ 114 (265)
T PRK10575 39 VTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPW-H 114 (265)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccc-c
Confidence 47999999999999999999999887 999999998764322 2356999999988889999999998743100 0
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
..... .. ......++.+++.+||++..++.++ .||||||||++|||
T Consensus 115 -~~~~~--------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~lar 160 (265)
T PRK10575 115 -GALGR--------------FG--------------AADREKVEEAISLVGLKPLAHRLVD-----SLSGGERQRAWIAM 160 (265)
T ss_pred -ccccC--------------CC--------------HHHHHHHHHHHHHcCCHHHhcCCcc-----cCCHHHHHHHHHHH
Confidence 00000 00 0001235668888999876776665 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
||+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 999999999999999999999999999999998653 356788899999999999999999999999999987765
No 432
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=7.8e-31 Score=293.42 Aligned_cols=202 Identities=21% Similarity=0.287 Sum_probs=157.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--C-eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR--G-YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~--~-~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++|++||++||+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478888887653 23599999999999999999999999999999999996431 1 2489999999
Q ss_pred eeCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKN-----QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~-----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.++. ...+++.++|++|+..+++ .|+.|++.+....+. .. .+.++.++++++.+++.+..+.... ....
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1234567999999988777 499999987653321 11 2233456777888887532111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~ 219 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDM 219 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999875 589999999976 55666676
No 433
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.97 E-value=2.1e-31 Score=297.27 Aligned_cols=193 Identities=27% Similarity=0.429 Sum_probs=156.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.++.....
T Consensus 29 ~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~- 104 (256)
T TIGR03873 29 LTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHR- 104 (256)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhh-
Confidence 47999999999999999999999987 9999999988754322 3468999999877888999999987421000
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
..+.. +. .+..+.++++++.+||.+..++.++ .||||||||++|||
T Consensus 105 -~~~~~--------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~ 150 (256)
T TIGR03873 105 -SLWAG--------------DS--------------PHDAAVVDRALARTELSHLADRDMS-----TLSGGERQRVHVAR 150 (256)
T ss_pred -hhccC--------------CC--------------HHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHH
Confidence 00000 00 0011234668888999876666554 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|++.+|++++|||||+|||+.+...+.+.|++++. .+++|++++|+.+++...||++++|++|++++.|+.+++
T Consensus 151 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 151 ALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHh
Confidence 99999999999999999999999999999999864 356788899999999999999999999999999987765
No 434
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1e-30 Score=293.36 Aligned_cols=204 Identities=22% Similarity=0.252 Sum_probs=157.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--R-GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~-~~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.+||
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 478999988753 2358999999999999999999999999999999999754 1 13589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++ .|++|++.+....+. ....+..++.+.++++.+++..-...... ....
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~-~~~~ 166 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLH-DNAY 166 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHh-cCcc
Confidence 87632 234567999999988777 499999988654321 11222234456777777765321111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+..|+
T Consensus 167 ~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~ 235 (271)
T PRK14238 167 GLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDK 235 (271)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999865 799999999976 34455666
No 435
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.2e-31 Score=296.85 Aligned_cols=195 Identities=22% Similarity=0.327 Sum_probs=150.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|..+ |....+|+|.++|+++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 34 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 112 (253)
T PRK14242 34 VTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLR 112 (253)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHH
Confidence 479999999999999999999864 1002389999999887531 12457999999988887 599999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+... .. ..+..++.+++.+||.+...... ++.++.||||||||+
T Consensus 113 ~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrv 158 (253)
T PRK14242 113 VNGVKD---------KA------------------------YLAERVERSLRHAALWDEVKDRL-HESALGLSGGQQQRL 158 (253)
T ss_pred HcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHHHHH
Confidence 221100 00 00122445677777753211111 233456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++++ +.+|++++|+.+++...||++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA---RYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999843 46788899999999999999999999999999988765
No 436
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.97 E-value=6.9e-32 Score=342.95 Aligned_cols=189 Identities=26% Similarity=0.384 Sum_probs=150.1
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
++|+|+||||||||+|+|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+| +.|++|||.++.. .
T Consensus 482 vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~gTI~eNi~~~~~-~--- 553 (686)
T TIGR03797 482 VAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SGSIFENIAGGAP-L--- 553 (686)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cccHHHHHhcCCC-C---
Confidence 7999999999999999999999988 9999999999876543 57899999998876 5699999997532 0
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
+ ..+..+..+. .+ .++.+ -.|++..||.+|+++ .+||||||||++||||
T Consensus 554 ~-------~e~i~~al~~---a~------------------l~~~i--~~lp~G~dt~ige~G-~~LSGGQrQRialARA 602 (686)
T TIGR03797 554 T-------LDEAWEAARM---AG------------------LAEDI--RAMPMGMHTVISEGG-GTLSGGQRQRLLIARA 602 (686)
T ss_pred C-------HHHHHHHHHH---cC------------------cHHHH--HhccccccccccCCC-CCCCHHHHHHHHHHHH
Confidence 0 0001110000 00 01111 136778899999765 5799999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|++++||||||+||+.+++++.+.|+++ + +|+++++|+.+.+ ..+|+|++|++|+++++|+++++.+
T Consensus 603 ll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~-~T~IiItHr~~~i-~~~D~Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 603 LVRKPRILLFDEATSALDNRTQAIVSESLERL----K-VTRIVIAHRLSTI-RNADRIYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----C-CeEEEEecChHHH-HcCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999875 2 3667788887555 5699999999999999999988753
No 437
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=4.9e-32 Score=260.05 Aligned_cols=186 Identities=22% Similarity=0.329 Sum_probs=156.9
Q ss_pred CcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCCCCCC
Q 000872 699 DKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPY 775 (1245)
Q Consensus 699 ~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ 775 (1245)
....+|+++|+.+++||..+|.||||||||||+++++....+ .+|++++.|.+.+. +.+|..++||.|.+.+++.
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp--~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~ 91 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGD 91 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCC--CCceEEEcCccccccChHHHHHHHHHHHcCcccccc
Confidence 455799999999999999999999999999999999987654 48999999998753 5788899999999999985
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000872 776 VTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 855 (1245)
Q Consensus 776 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpT 855 (1245)
||.||+.|.-.+|... + ..+...+.++.+++.+..-+ ..+..||||||||++|+|-|..-|+||+|||||
T Consensus 92 -tVeDNlifP~~~r~rr-~----dr~aa~~llar~~l~~~~L~----k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 92 -TVEDNLIFPWQIRNRR-P----DRAAALDLLARFALPDSILT----KNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred -chhhccccchHHhccC-C----ChHHHHHHHHHcCCchhhhc----chhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 9999999988777422 1 12335677888888764322 124579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhhh
Q 000872 856 SGLDARAAAVVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 856 sgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|.||..+++.|-++|-++. .+.++|+-++|+|... ...+|+
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa-~rha~k 203 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQA-IRHADK 203 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHH-hhhhhe
Confidence 9999999999999998886 5689999999999743 456777
No 438
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=293.08 Aligned_cols=202 Identities=18% Similarity=0.227 Sum_probs=157.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---eeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG---YITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~---~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 588899987652 235999999999999999999999999999999999975321 2479999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ..+++.++|++|+..+++. |+.|++.+....+. .. ...++.+++.++.+++......... ....
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 160 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EKGT 160 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CCcc
Confidence 87532 2345679999999887764 99999987644321 11 1223446777888887421111111 1245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+..|+
T Consensus 161 ~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~ 229 (274)
T PRK14265 161 ALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADW 229 (274)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCE
Confidence 7999999999999999999999999999999999999999999999864 799999999986 45566676
No 439
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.7e-31 Score=297.84 Aligned_cols=193 Identities=26% Similarity=0.415 Sum_probs=156.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.+|+.||+.++.....
T Consensus 30 ~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~- 105 (255)
T PRK11231 30 ITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWL- 105 (255)
T ss_pred EEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhh-
Confidence 47999999999999999999999887 999999998764322 23569999999888888999999987521000
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
..+.. .. .+....++++++.+||++..++.++ .||||||||++|||
T Consensus 106 -~~~~~---~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~lar 151 (255)
T PRK11231 106 -SLWGR---LS-------------------------AEDNARVNQAMEQTRINHLADRRLT-----DLSGGQRQRAFLAM 151 (255)
T ss_pred -hhccC---CC-------------------------HHHHHHHHHHHHHcCCHHHHcCCcc-----cCCHHHHHHHHHHH
Confidence 00000 00 0001234668888999877776654 59999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
|++.+|+++||||||+|||+.++..+.+.|++++. .++++++++|+.+++.+.||++++|++|+++..|+.+++
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~--~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT--QGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHh
Confidence 99999999999999999999999999999998864 356788899999999999999999999999999987765
No 440
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.97 E-value=3.1e-31 Score=292.08 Aligned_cols=191 Identities=26% Similarity=0.416 Sum_probs=157.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc-cceEEEeccccccCCCCCHHHHHHHHHhccCCCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP-QRTAAYISQHDIHIGEMTVRETLAFSARCQGVGS 79 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~~ 79 (1245)
+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++..|++||+.+.....+.
T Consensus 28 ~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~-- 102 (237)
T TIGR00968 28 LVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRKH-- 102 (237)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHHHHHHhHHHhcCC--
Confidence 47899999999999999999999887 9999999988754322 35799999999989899999999876532210
Q ss_pred ccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHHH
Q 000872 80 RYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEML 159 (1245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~al 159 (1245)
... .....++++++.+++.+..++.++ .||||||||++|||+|
T Consensus 103 --------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral 145 (237)
T TIGR00968 103 --------PKA------------------------KIKARVEELLELVQLEGLGDRYPN-----QLSGGQRQRVALARAL 145 (237)
T ss_pred --------CHH------------------------HHHHHHHHHHHHcCCHhHhhCChh-----hCCHHHHHHHHHHHHH
Confidence 000 001124567888888776666554 5999999999999999
Q ss_pred hcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 160 VGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 160 ~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
+.+|++++|||||+|||+.++..+.+.|++++.. .+.++++++|+.+++.+.||++++|++|++++.|+.+++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999987652 3567788999999999999999999999999999987763
No 441
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=99.97 E-value=1.3e-30 Score=290.59 Aligned_cols=198 Identities=23% Similarity=0.310 Sum_probs=156.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.+.++++++.+. .+.+|+|+|++++|||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478888887652 2359999999999999999999999999999999999621123589999999876
Q ss_pred Cc---ccccc-eEEEEccCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000872 755 NQ---ETFTR-ISGYCEQNDIHSPYVTVYESLLYSAWLRLS----SEVNSKTREMFVEEVMELVELN-PLRQALVGLPGV 825 (1245)
Q Consensus 755 ~~---~~~~~-~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~ 825 (1245)
.. ...++ .++|++|++.+++.+|+.|++.+....... ......+..++++++++.+|+. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 43 12222 478999999999999999998775432110 0112223345678889999986 34444322
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCH
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSI 889 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~ 889 (1245)
..||||||||++||++|+.+|++++|||||+|||..++..+.+.|++++++|+|||+++|++..
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~ 213 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL 213 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 2499999999999999999999999999999999999999999999987779999999999763
No 442
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=99.97 E-value=7.2e-31 Score=321.17 Aligned_cols=195 Identities=21% Similarity=0.314 Sum_probs=164.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. ++.+|+|+|+++++||++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478889988763 23599999999999999999999999999999999998654 489999999876
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000872 755 NQE---T-FTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLST 830 (1245)
Q Consensus 755 ~~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSg 830 (1245)
... . .++.+||++|+..+++.+||.|++.+... ...+.+++++++++.+|+.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~-------~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP-------KRQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc-------cchHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 22458999999999999999999987431 11233456889999999987766654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 831 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 831 Gerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+..|+
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~ 209 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADR 209 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCE
Confidence 9999999999999999999999999999999999999999999878999999999986 34566676
No 443
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=1.5e-31 Score=334.69 Aligned_cols=192 Identities=22% Similarity=0.302 Sum_probs=151.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++.. .++.++||+|++.+|+. |++|||.++...
T Consensus 369 ~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~~~--- 441 (592)
T PRK10790 369 FVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGRDI--- 441 (592)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCCCC---
Confidence 37999999999999999999999998 999999999887654 35789999999987765 999999985310
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
+ ..+.++..+. . -.++.++ .|++..||.+|+.+. +||||||||++|||
T Consensus 442 -~-------d~~i~~a~~~---------------~------gl~~~i~--~lp~Gldt~i~e~g~-~LSGGqrQRialAR 489 (592)
T PRK10790 442 -S-------EEQVWQALET---------------V------QLAELAR--SLPDGLYTPLGEQGN-NLSVGQKQLLALAR 489 (592)
T ss_pred -C-------HHHHHHHHHH---------------c------CcHHHHH--hccccccccccCCCC-CCCHHHHHHHHHHH
Confidence 0 0001100000 0 0011111 256778999998554 69999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
||+++|+|++||||||+||+.+++.+.+.|+++.. ++|+++++|+.+. ...||+|++|++|++++.|+++++.+
T Consensus 490 aLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~---~~tvIivtHr~~~-l~~~D~ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 490 VLVQTPQILILDEATANIDSGTEQAIQQALAAVRE---HTTLVVIAHRLST-IVEADTILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecchHH-HHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999988753 3566667787644 55799999999999999999998853
No 444
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.97 E-value=6.6e-32 Score=335.97 Aligned_cols=193 Identities=26% Similarity=0.417 Sum_probs=154.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
.+||+||||||||||++.|+|.++|. +|+|.+||.++++... ++.++||+|++.+|. .||+|||.++..--
T Consensus 357 ~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~a-- 430 (567)
T COG1132 357 KVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRPDA-- 430 (567)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCCCC--
Confidence 37999999999999999999999987 9999999999876653 578999999888776 89999999864210
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
+ .+...++++.. ..++.+. .|++..||.||+++. +||||||||++|||
T Consensus 431 -t-~eei~~a~k~a---------------------------~~~d~I~--~lp~g~dt~vge~G~-~LSgGQrQrlaiAR 478 (567)
T COG1132 431 -T-DEEIEEALKLA---------------------------NAHEFIA--NLPDGYDTIVGERGV-NLSGGQRQRLAIAR 478 (567)
T ss_pred -C-HHHHHHHHHHh---------------------------ChHHHHH--hCcccccceecCCCc-cCCHHHHHHHHHHH
Confidence 0 00011110000 0111222 357789999996555 69999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|++++|+||+||||||+||+.++..+.+.++++.+ ++| +++|+|..+.+.+ +|+|+||++|++++.|+++++.+
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT-~iiIaHRlsti~~-aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRT-TLIIAHRLSTIKN-ADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCE-EEEEeccHhHHHh-CCEEEEEECCEEEEecCHHHHHH
Confidence 99999999999999999999999999999997653 344 4458888877776 99999999999999999999864
No 445
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.9e-31 Score=294.37 Aligned_cols=192 Identities=20% Similarity=0.337 Sum_probs=151.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+||||||||+++|+|..+|. ...+|+|.++|.++... ..++.++|++|++.+++ +|++||+.|...
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~ 110 (251)
T PRK14270 32 ITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPR 110 (251)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHH
Confidence 47999999999999999999998641 11389999999987432 12456999999988887 899999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc----cccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV----CADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~~t~vg~~~~~~LSGGq 149 (1245)
..+... .. +....++.+++.+||.+ ..+. .+..|||||
T Consensus 111 ~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~ 152 (251)
T PRK14270 111 IHGIKD---------KK------------------------ELDKIVEWALKKAALWDEVKDDLKK-----SALKLSGGQ 152 (251)
T ss_pred hcCCCc---------HH------------------------HHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHH
Confidence 221000 00 00122455677777742 2333 345699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++||||++.+|++++|||||+|||+.++.++.+.|+++++ + +++++++|+.+++.+.||++++|++|++++.|+
T Consensus 153 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (251)
T PRK14270 153 QQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNK 229 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCC
Confidence 9999999999999999999999999999999999999998864 3 577888999999999999999999999999999
Q ss_pred hhhHH
Q 000872 230 LEHVE 234 (1245)
Q Consensus 230 ~~~~~ 234 (1245)
.+++.
T Consensus 230 ~~~~~ 234 (251)
T PRK14270 230 TEKIF 234 (251)
T ss_pred HHHHh
Confidence 88763
No 446
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.3e-31 Score=296.01 Aligned_cols=192 Identities=21% Similarity=0.353 Sum_probs=152.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+++.+||+||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~ 111 (258)
T PRK14241 32 VTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLK 111 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHH
Confidence 47999999999999999999998641 01399999999876421 224579999999999999999999987653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc----cccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV----CADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~~t~vg~~~~~~LSGGq 149 (1245)
.... .. . .+.++.++++++.+||.+ ..+. .+.+|||||
T Consensus 112 ~~~~---~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~ 153 (258)
T PRK14241 112 LNGV---RN------K------------------------KDLDELVEKSLRGANLWNEVKDRLDK-----PGGGLSGGQ 153 (258)
T ss_pred hcCC---CC------H------------------------HHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHH
Confidence 2210 00 0 001123456777888742 2333 345699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEec------CCc
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVS------DGQ 223 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~------~G~ 223 (1245)
|||++|||||+.+|+++||||||+|||+.++..+.+.|+++++ ++++++++|+.+++.+.||++++|+ +|+
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~ 230 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ---DYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGR 230 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhCCEEEEEecccCCCCce
Confidence 9999999999999999999999999999999999999998853 3578889999999999999999996 799
Q ss_pred EEEecChhhH
Q 000872 224 IVYQGPLEHV 233 (1245)
Q Consensus 224 iv~~G~~~~~ 233 (1245)
+++.|+++++
T Consensus 231 i~~~~~~~~~ 240 (258)
T PRK14241 231 LVEIDDTEKI 240 (258)
T ss_pred EEecCCHHHH
Confidence 9999998776
No 447
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=99.97 E-value=2.1e-31 Score=294.21 Aligned_cols=194 Identities=24% Similarity=0.383 Sum_probs=145.9
Q ss_pred EEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc
Q 000872 677 TFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ 756 (1245)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~ 756 (1245)
+++|+++.+.. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHh
Confidence 46677765421 124599999999999999999999999999999999998654 48999999987532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 000872 757 ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTRE-----MFVEEVMELV--ELNPLRQALVGLPGVN 826 (1245)
Q Consensus 757 ---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~ 826 (1245)
..+++.++|++|+..+++ .||.|++.+... ........ ...++.++.+ ++....+. ..+
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCC
Confidence 234567999999987764 699999976321 11111100 0112233333 22222222 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|++++ +|+|||+++|++.. + +..|+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~ 205 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADR 205 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCE
Confidence 799999999999999999999999999999999999999999999986 48999999999963 3 34565
No 448
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=99.97 E-value=1.4e-30 Score=291.70 Aligned_cols=208 Identities=24% Similarity=0.299 Sum_probs=161.8
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
+.++|+++.+.... ..+ ...++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 67788887663100 000 00134699999999999999999999999999999999997653 4899999998754
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000872 756 QE------TFTRISGYCEQND--IHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELN-PLRQALVGLPGVN 826 (1245)
Q Consensus 756 ~~------~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 826 (1245)
.. ..++.++|++|+. .+.+..|+.|++.+..... ......+..+.++++++.+|+. +..+.. .+
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 2456799999997 3567789999987643211 1223344556789999999996 455543 34
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++.++ |+|||+++|++. .+-+..|+
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~ 221 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQR 221 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCE
Confidence 69999999999999999999999999999999999999999999998764 899999999985 44455566
No 449
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=99.97 E-value=2.1e-31 Score=340.27 Aligned_cols=195 Identities=27% Similarity=0.358 Sum_probs=161.1
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|++|+++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 36899999998742 124699999999999999999999999999999999998664 48999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~ 823 (1245)
.++ ..+++.++||+|++.++. -|++||+.+.. .+.+ ++.++++++..++.+. .||.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 643 467889999999998885 59999997531 1122 2346677777776543 46667754
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||++|||+|+++|+||+||||||+||+.++..+.+.|++ .++|+|+++|+++ ....+|+
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~ 680 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDE 680 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCE
Confidence 457999999999999999999999999999999999999999999986 4899999999985 3455776
No 450
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.8e-31 Score=293.81 Aligned_cols=196 Identities=20% Similarity=0.316 Sum_probs=153.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+++.+|++||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~ 111 (252)
T PRK14256 32 VTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYK 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHH
Confidence 479999999999999999999985 3112389999999887431 224679999999999999999999987543
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+. .+ .. +.+..++++++.+|+.+...... +..+..||||||||+
T Consensus 112 ~~~~---~~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrl 157 (252)
T PRK14256 112 LNGR---VN------RS------------------------EADEIVESSLKRVALWDEVKDRL-KSNAMELSGGQQQRL 157 (252)
T ss_pred hcCC---CC------HH------------------------HHHHHHHHHHHHcCCchhhhHHh-hCCcCcCCHHHHHHH
Confidence 2110 00 00 00123456777788754211111 123446999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +++|++++|+.+++.++||++++|++|++++.|+.+++
T Consensus 158 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~---~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 158 CIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE---KYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh---CCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999864 35778899999999999999999999999999998776
No 451
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.4e-31 Score=296.82 Aligned_cols=196 Identities=21% Similarity=0.346 Sum_probs=152.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|..+|. ...+|+|.++|+++... ..++.++|++|++.+++. ||+||+.++..
T Consensus 47 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 125 (267)
T PRK14235 47 VTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPR 125 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHH
Confidence 47999999999999999999998741 01399999999887531 124579999999887874 99999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.++... ... +....++++++.+||.+...... +..++.||||||||+
T Consensus 126 ~~~~~~--------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrv 172 (267)
T PRK14235 126 IHGLAR--------SKA------------------------ELDEIVETSLRKAGLWEEVKDRL-HEPGTGLSGGQQQRL 172 (267)
T ss_pred hccccc--------chH------------------------HHHHHHHHHHHHcCCchhhhHHh-hCCcccCCHHHHHHH
Confidence 221000 000 00123456788888864211111 123446999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++|||||||+|||+.++..+.+.|+++++ +.+|++++|+.+++...||++++|++|+++..|+.+++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~---~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ---NYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKM 249 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc---CCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998853 35778899999999999999999999999999987765
No 452
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=3.9e-31 Score=292.94 Aligned_cols=187 Identities=24% Similarity=0.376 Sum_probs=153.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|..+ . +|+|.++|+++..... ++.++|++|++.+++.+|++||+.+......
T Consensus 24 i~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~- 98 (248)
T PRK03695 24 ILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVFQYLTLHQPDKT- 98 (248)
T ss_pred EEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHHHHHHhcCccCC-
Confidence 479999999999999999999974 3 8999999988754332 3458999999888889999999987521100
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
... +....++++++.+||.+..++.++ .||||||||++||+
T Consensus 99 ----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~ 139 (248)
T PRK03695 99 ----------RTE------------------------AVASALNEVAEALGLDDKLGRSVN-----QLSGGEWQRVRLAA 139 (248)
T ss_pred ----------CcH------------------------HHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHH
Confidence 000 011235668888999877666554 59999999999999
Q ss_pred HHhc-------CCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecCh
Q 000872 158 MLVG-------PAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPL 230 (1245)
Q Consensus 158 al~~-------~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~ 230 (1245)
||+. +|+++||||||+|||+.++..+.+.|+++++ .++++++++|+.+++..+||++++|++|++++.|+.
T Consensus 140 al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 217 (248)
T PRK03695 140 VVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ--QGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRR 217 (248)
T ss_pred HHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9997 6799999999999999999999999999864 356788899999999999999999999999999987
Q ss_pred hhH
Q 000872 231 EHV 233 (1245)
Q Consensus 231 ~~~ 233 (1245)
+++
T Consensus 218 ~~~ 220 (248)
T PRK03695 218 DEV 220 (248)
T ss_pred HHH
Confidence 765
No 453
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=99.97 E-value=3.5e-31 Score=335.91 Aligned_cols=195 Identities=26% Similarity=0.392 Sum_probs=159.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++++++.. +++++|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEEH
Confidence 68999999987421 124699999999999999999999999999999999998764 489999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 824 (1245)
++ ..+++.++||+|++.++. -|++||+.++. + +.+ ++.++++++..++.+. .||.+|..
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~- 614 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK- 614 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC-
Confidence 43 456788999999998875 69999997642 1 112 3446777777777543 46667754
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||++|||+|+++|+||+||||||+||++++..+.+ .. ..+++|+|+++|+++ ..+.+|+
T Consensus 615 G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~ 682 (711)
T TIGR00958 615 GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQ 682 (711)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCE
Confidence 35699999999999999999999999999999999999999988 22 235899999999985 3466776
No 454
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.8e-31 Score=304.08 Aligned_cols=202 Identities=18% Similarity=0.214 Sum_probs=156.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC-CceeeEEEECCccCCCCcc-------cceEEEeccccc--cCCCCCHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS-LKASGKVTYNGHDMHEFVP-------QRTAAYISQHDI--HIGEMTVRETLAF 70 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~--~~~~~Tv~e~l~f 70 (1245)
+++|+|+||||||||+++|+|.+++. ...+|+|.++|+++..... ++.++||+|++. +.+.+||.+++.+
T Consensus 35 ~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~ 114 (330)
T PRK15093 35 IRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQ 114 (330)
T ss_pred EEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHH
Confidence 47999999999999999999998631 1248999999998754322 246999999875 6788999999976
Q ss_pred HHhccCC-CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccccccccc
Q 000872 71 SARCQGV-GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 71 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 149 (1245)
....... +.++. .. .+....+.++++.+||.+..+ .-+..+..|||||
T Consensus 115 ~~~~~~~~~~~~~------~~-----------------------~~~~~~~~~~L~~~gL~~~~~--~~~~~p~~LSgG~ 163 (330)
T PRK15093 115 NIPGWTYKGRWWQ------RF-----------------------GWRKRRAIELLHRVGIKDHKD--AMRSFPYELTEGE 163 (330)
T ss_pred HHHhhhccccccc------cH-----------------------HHHHHHHHHHHHHCCCCChHH--HHhCCchhCCHHH
Confidence 4321100 00000 00 001224567899999975321 1123345699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+. .+.++++++|+...+..++|+|++|++|+|++.|+
T Consensus 164 ~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~ 242 (330)
T PRK15093 164 CQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWADKINVLYCGQTVETAP 242 (330)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999998753 36688889999999999999999999999999999
Q ss_pred hhhHH
Q 000872 230 LEHVE 234 (1245)
Q Consensus 230 ~~~~~ 234 (1245)
.+++.
T Consensus 243 ~~~i~ 247 (330)
T PRK15093 243 SKELV 247 (330)
T ss_pred HHHHH
Confidence 88763
No 455
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4e-31 Score=293.12 Aligned_cols=197 Identities=19% Similarity=0.270 Sum_probs=153.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+++|+||||||||||+++|+|..+|..+.+|+|.++|+++.... .++.++|++|++.+++ .|++||+.++...++.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~ 108 (246)
T PRK14269 30 ITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGM 108 (246)
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCc
Confidence 47999999999999999999997531123999999999875432 2457999999988886 6999999886432210
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
.. .. ......++.+++.+||.+...... ++..+.||||||||++|||
T Consensus 109 ~~--------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~lar 155 (246)
T PRK14269 109 IK--------NK------------------------DEEEALVVDCLQKVGLFEEVKDKL-KQNALALSGGQQQRLCIAR 155 (246)
T ss_pred cc--------Ch------------------------HHHHHHHHHHHHHcCCChhhhHHh-cCCcccCCHHHHHHHHHHH
Confidence 00 00 001122456788888853211111 2334569999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
||+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+++...+|++++|++|++++.|+.+++.
T Consensus 156 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 156 ALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFF 229 (246)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999998753 567888999999999999999999999999999987763
No 456
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.97 E-value=2.7e-31 Score=297.20 Aligned_cols=209 Identities=29% Similarity=0.423 Sum_probs=172.3
Q ss_pred CCCccCCCCeEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeE
Q 000872 665 RGMVLPFEPFSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYIT 744 (1245)
Q Consensus 665 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~ 744 (1245)
..+.+|.+...+..+++.+..+ ..++++|+|+||.++|||-+||+||||||||||.++|.|-..+ .+
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~PP-----------g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p--~~ 390 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAAPP-----------GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPP--TS 390 (580)
T ss_pred CCCCCCCCCceeeEeeeeecCC-----------CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHccccc--CC
Confidence 3456676777899999987431 2346899999999999999999999999999999999997664 58
Q ss_pred EEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHH-----HHHHHHHHHHHHcCCcccc
Q 000872 745 GNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSK-----TREMFVEEVMELVELNPLR 816 (1245)
Q Consensus 745 G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~-----~~~~~v~~~l~~l~l~~~~ 816 (1245)
|.|.+||.+.++ +.+-+.+||.||+-.+++. ||.||+. |+..+.+.+ .+.+.|.|++ +.+.+-.
T Consensus 391 G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~GY 462 (580)
T COG4618 391 GSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQGY 462 (580)
T ss_pred CcEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcCCc
Confidence 999999988654 5567889999999998874 9999993 333233322 2333445553 5667788
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhh
Q 000872 817 QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 896 (1245)
Q Consensus 817 ~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd 896 (1245)
||.+|..+ .+||||||||+++||||-.||.+++||||-|+||.+.+..+.+.|.+..++|+|+|+++|+|+ +....|
T Consensus 463 dT~iG~~G-~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~D 539 (580)
T COG4618 463 DTRIGEGG-ATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASVD 539 (580)
T ss_pred cCccCCCC-CCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhcc
Confidence 99999754 579999999999999999999999999999999999999999999999989999999999996 556666
Q ss_pred h
Q 000872 897 A 897 (1245)
Q Consensus 897 ~ 897 (1245)
+
T Consensus 540 k 540 (580)
T COG4618 540 K 540 (580)
T ss_pred e
Confidence 5
No 457
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=5.5e-32 Score=266.90 Aligned_cols=194 Identities=24% Similarity=0.385 Sum_probs=164.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
+|+++|||||||||||.+++.+++++ +|+|+++|.++..... .+.++.+.|+...-..+||+|-+.||.--..-
T Consensus 29 iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPYSq 105 (252)
T COG4604 29 ITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPYSQ 105 (252)
T ss_pred eeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcccC
Confidence 58999999999999999999999987 9999999999876654 36688899999888899999999997421110
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHH
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGE 157 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~ 157 (1245)
.+ + ..+.+..+++.++.+.|++..|..+ .+||||||||.-||+
T Consensus 106 -GR---------l----------------------t~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAM 148 (252)
T COG4604 106 -GR---------L----------------------TKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAM 148 (252)
T ss_pred -CC---------C----------------------chHHHHHHHHHHHHhcccchHHHhH-----Hhcccchhhhhhhhe
Confidence 00 0 0112345778899999988877555 469999999999999
Q ss_pred HHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 158 MLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 158 al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
.++++.+.++||||.+.||...+.++++.|+++++..+++ |+++.|+...+..++|+|+-|++|+++.+|+++++.+
T Consensus 149 VlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Kt-iviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 149 VLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKT-IVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCe-EEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcC
Confidence 9999999999999999999999999999999999987655 5557899999999999999999999999999998753
No 458
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=99.97 E-value=5.6e-31 Score=275.24 Aligned_cols=147 Identities=30% Similarity=0.460 Sum_probs=129.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVT 777 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 777 (1245)
+.+++++|+++++||+++|+||||||||||+++|+|..++ .+|+|.+||.+... ..+++.++|++|+..+++ .|
T Consensus 15 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (173)
T cd03246 15 PPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRP--TSGRVRLDGADISQWDPNELGDHVGYLPQDDELFS-GS 91 (173)
T ss_pred CcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEEcccCCHHHHHhheEEECCCCcccc-Cc
Confidence 3599999999999999999999999999999999998654 48999999987643 234567899999987776 49
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000872 778 VYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 857 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsg 857 (1245)
++|++ ||||||||++||++|+.+|++++|||||+|
T Consensus 92 v~~~l---------------------------------------------LS~G~~qrv~la~al~~~p~~lllDEPt~~ 126 (173)
T cd03246 92 IAENI---------------------------------------------LSGGQRQRLGLARALYGNPRILVLDEPNSH 126 (173)
T ss_pred HHHHC---------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCccc
Confidence 98876 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 858 LDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 858 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||+.++..+.+.|++++++|+|||+++|++. .+ +..|+
T Consensus 127 LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~-~~~d~ 164 (173)
T cd03246 127 LDVEGERALNQAIAALKAAGATRIVIAHRPE-TL-ASADR 164 (173)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhCCE
Confidence 9999999999999998777999999999985 33 45565
No 459
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=289.07 Aligned_cols=205 Identities=21% Similarity=0.282 Sum_probs=158.6
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--e--eEEEEEEC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRG--Y--ITGNITIS 750 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~--~--~~G~i~~~ 750 (1245)
.+.++++++++. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+. . +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 377888877652 346999999999999999999999999999999999975432 1 23666666
Q ss_pred CeeCC---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000872 751 GYPKN---QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNG 827 (1245)
Q Consensus 751 g~~~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~ 827 (1245)
|.+.. ...+++.++|++|++.+++.+|++|++.+...... ....++..+.++++++.+++.+........ ....
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 153 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNS-PASQ 153 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcC-Cccc
Confidence 65542 12346678999999998889999999988654321 112334445688999999996421111111 2357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 828 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 828 lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||||++|||+|+.+|++++|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+-+..|+
T Consensus 154 LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~ 221 (257)
T PRK14246 154 LSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADY 221 (257)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCE
Confidence 999999999999999999999999999999999999999999998864 699999999985 45556676
No 460
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=289.44 Aligned_cols=204 Identities=22% Similarity=0.291 Sum_probs=158.9
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--C-CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT--R-GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~--~-~~~~G~i~~~g 751 (1245)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 467888877652 2359999999999999999999999999999999999643 1 12589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVN 826 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~ 826 (1245)
.+... ...++.++|++|+..+++. |+.|++.+...... ....+..++++.+.++.+|+.+....... ....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87642 2345679999999888875 99999987643221 11223345667888999988542211221 2245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.||||||||++|||+|+.+|++++|||||+|||..+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~ 214 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKY 214 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCE
Confidence 7999999999999999999999999999999999999999999999864 899999999985 44444444
No 461
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.8e-31 Score=294.27 Aligned_cols=195 Identities=17% Similarity=0.272 Sum_probs=152.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCC---CCCCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGK---LDSSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSA 72 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~---~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~ 72 (1245)
+++|+||||||||||+++|+|. .+|. ..+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++.
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~ 108 (250)
T PRK14245 31 VVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGL 108 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHH
Confidence 4799999999999999999996 3331 2389999999987532 12456999999988776 69999998765
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchh
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKR 152 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1245)
...+... .+ ..+..++++++.+||.+...+.. +..+..||||||||
T Consensus 109 ~~~~~~~----------~~-----------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qr 154 (250)
T PRK14245 109 RVNGVKD----------NA-----------------------FIRQRVEETLKGAALWDEVKDKL-KESAFALSGGQQQR 154 (250)
T ss_pred HHcCCCc----------HH-----------------------HHHHHHHHHHHHcCCCcchhhhh-hCCcccCCHHHHHH
Confidence 3221000 00 00123456788888864321111 13345699999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhh
Q 000872 153 VTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 153 v~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~ 232 (1245)
++|||||+.+|+++||||||+|||+.++..+.+.|+++.+ +++|++++|+.+++.+.||++++|++|++++.|++++
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK---DYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999842 4677889999999999999999999999999999887
Q ss_pred HH
Q 000872 233 VE 234 (1245)
Q Consensus 233 ~~ 234 (1245)
+.
T Consensus 232 ~~ 233 (250)
T PRK14245 232 IF 233 (250)
T ss_pred Hh
Confidence 63
No 462
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=99.97 E-value=3.5e-31 Score=336.98 Aligned_cols=197 Identities=26% Similarity=0.408 Sum_probs=163.3
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP 753 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~ 753 (1245)
..++++|++++++. ..+++|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36899999998842 224699999999999999999999999999999999998664 48999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000872 754 KNQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLP 823 (1245)
Q Consensus 754 ~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~ 823 (1245)
.++ ..+++.++||+|++.+++ -|++||+.+.. .+.+ ++.++++++..++.+ -.||.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCC----HHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 653 467889999999998886 59999997641 1122 234566677666654 346777765
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+ .+||||||||++|||+|+++|+|++||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.+|+
T Consensus 599 G-~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~ 668 (694)
T TIGR03375 599 G-RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDR 668 (694)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCE
Confidence 3 5699999999999999999999999999999999999999999999886 4899999999996 3467777
No 463
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=99.97 E-value=3.3e-31 Score=337.94 Aligned_cols=195 Identities=23% Similarity=0.362 Sum_probs=161.0
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++++++. ++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEEH
Confidence 6899999998731 23599999999999999999999999999999999998664 489999999986
Q ss_pred C---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000872 755 N---QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLPG 824 (1245)
Q Consensus 755 ~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 824 (1245)
+ ...+++.+|||+|++.+++. |++||+.+... .+.+ ++.++++++..++.+ -.||.+|..
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~- 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEE- 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCC-
Confidence 4 35678889999999988864 99999986421 1222 233566666666643 346777764
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
..+||||||||++||||++++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|+
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~ 677 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDK 677 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCE
Confidence 3579999999999999999999999999999999999999999999875 4899999999996 4466776
No 464
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=99.97 E-value=1.9e-30 Score=288.82 Aligned_cols=196 Identities=27% Similarity=0.313 Sum_probs=151.5
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN 755 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~ 755 (1245)
++++|+++.++ ++.+|+|+|+.|++||++||+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 46778877652 23599999999999999999999999999999999997421135899999998753
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHH-hcCCCC---CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000872 756 QE---T-FTRISGYCEQNDIHSPYVTVYESLLYSAW-LRLSSE---VNSKTREMFVEEVMELVELN-PLRQALVGLPGVN 826 (1245)
Q Consensus 756 ~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~-lr~~~~---~~~~~~~~~v~~~l~~l~l~-~~~~~~~g~~~~~ 826 (1245)
.. . .++.++|++|+..+++.+|+.+++.+... ++.... ....+.++.+++.++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 23468999999888888887776643211 111000 11223345678888999984 3444332 12
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 827 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 827 ~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
.||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++++.|+|||+++|++.
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~ 206 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR 206 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 59999999999999999999999999999999999999999999998777899999999976
No 465
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=99.97 E-value=5.1e-31 Score=306.10 Aligned_cols=192 Identities=32% Similarity=0.415 Sum_probs=158.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC-----cccceEEEecccc--ccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHD--IHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~--~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+||||||||.++|+|+.+|+ +|+|.++|.+.... ..++.+-+++||| .+.|.+||+++|.....
T Consensus 319 ~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~ 395 (539)
T COG1123 319 TLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLR 395 (539)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHh
Confidence 47999999999999999999999997 99999999872111 1124556666664 68899999999987665
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.+.... ..+.+++++++++..||+.. ..++.+..||||||||+
T Consensus 396 ~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~----~l~ryP~elSGGQrQRv 438 (539)
T COG1123 396 IHGGGS---------------------------------GAERRARVAELLELVGLPPE----FLDRYPHELSGGQRQRV 438 (539)
T ss_pred hhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----HHhcCchhcCcchhHHH
Confidence 432110 01122357788999999852 33456667999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++++|||||+||+.++.++.+.|+++.++. +.+.+.|+||...+...||||+||++|+|++.|+.+++
T Consensus 439 aIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~-g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v 517 (539)
T COG1123 439 AIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL-GLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKV 517 (539)
T ss_pred HHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHH
Confidence 99999999999999999999999999999999999998764 67788899999999999999999999999999988877
No 466
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=1.2e-31 Score=335.39 Aligned_cols=193 Identities=25% Similarity=0.425 Sum_probs=151.4
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
++|+|+||||||||+++|+|.++|+ +|+|.+||.++++.. .++.++||||++.+|+ .|++|||.++..
T Consensus 372 ~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~----- 442 (582)
T PRK11176 372 VALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYART----- 442 (582)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-chHHHHHhcCCC-----
Confidence 7999999999999999999999988 999999999886654 3577999999988765 699999987421
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
+.++ ..+.+...+ .. ..++.++ .|++..||.+|+.+ ++||||||||++||||
T Consensus 443 ~~~~----~~~i~~al~---------------~~------~l~~~i~--~lp~Gldt~ig~~g-~~LSGGqrQRi~LARa 494 (582)
T PRK11176 443 EQYS----REQIEEAAR---------------MA------YAMDFIN--KMDNGLDTVIGENG-VLLSGGQRQRIAIARA 494 (582)
T ss_pred CCCC----HHHHHHHHH---------------Hh------CcHHHHH--hcccccCceeCCCC-CcCCHHHHHHHHHHHH
Confidence 0000 000000000 00 0011111 26778899999865 5699999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|++++||||||+||+.++..+.+.|+++.. ++|+++++|+.+ ..+.||+|++|++|++++.|+++++.+
T Consensus 495 ll~~~~ililDEptsaLD~~t~~~i~~~l~~~~~---~~tvI~VtHr~~-~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 495 LLRDSPILILDEATSALDTESERAIQAALDELQK---NRTSLVIAHRLS-TIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred HHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC---CCEEEEEecchH-HHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999988643 456677888874 556799999999999999999988753
No 467
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=99.97 E-value=8.5e-31 Score=291.77 Aligned_cols=192 Identities=23% Similarity=0.259 Sum_probs=152.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC-ceeeEEEECCccCCCCcc-cceEEEeccccc--cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL-KASGKVTYNGHDMHEFVP-QRTAAYISQHDI--HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+||||||||||+++|+|..+|.. ..+|+|.++|+++..... ++.++||+|++. +.+..|+.+++.+.+...+
T Consensus 31 ~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~ 110 (254)
T PRK10418 31 VLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG 110 (254)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC
Confidence 479999999999999999999998710 039999999988753322 356999999974 4456799999876432211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc---cccccccCccccccccccchhh
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV---CADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
. . . ....++++++.+||.+ ..++.+ ..||||||||+
T Consensus 111 ~--~--------~--------------------------~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~Gq~qrv 149 (254)
T PRK10418 111 K--P--------A--------------------------DDATLTAALEAVGLENAARVLKLYP-----FEMSGGMLQRM 149 (254)
T ss_pred C--C--------h--------------------------HHHHHHHHHHHcCCCChhhhhhcCC-----cccCHHHHHHH
Confidence 0 0 0 0123456788888875 234433 46999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++|||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+.+|++++|++|++++.|+.+++
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 228 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETL 228 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999998653 366788899999999999999999999999999998776
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 229 ~ 229 (254)
T PRK10418 229 F 229 (254)
T ss_pred h
Confidence 3
No 468
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.6e-30 Score=294.41 Aligned_cols=206 Identities=25% Similarity=0.320 Sum_probs=160.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC---CeeEEEEEECC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR---GYITGNITISG 751 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~---~~~~G~i~~~g 751 (1245)
.+.++|+++.+. .+.+|+++|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 578899987653 23599999999999999999999999999999999997542 13589999999
Q ss_pred eeCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000872 752 YPKNQ-----ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSS---------EVN-SKTREMFVEEVMELVELNPLR 816 (1245)
Q Consensus 752 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~l~~~~ 816 (1245)
.++.. ...++.++|++|+..+++ .||+|++.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87642 134567999999988777 59999998865432100 011 123345678899999885322
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhh
Q 000872 817 QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 896 (1245)
Q Consensus 817 ~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd 896 (1245)
+.... ...+.||||||||++||++|+.+|+||+|||||+|||..++..+.+.|+++++ ++|||+++|++. .+.+..|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 22222 22457999999999999999999999999999999999999999999999876 589999999986 3445666
Q ss_pred h
Q 000872 897 A 897 (1245)
Q Consensus 897 ~ 897 (1245)
+
T Consensus 268 ~ 268 (305)
T PRK14264 268 Q 268 (305)
T ss_pred E
Confidence 5
No 469
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=99.97 E-value=2.3e-30 Score=288.73 Aligned_cols=200 Identities=26% Similarity=0.279 Sum_probs=156.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCee-
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYP- 753 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~- 753 (1245)
.+.++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 367888887652 23589999999999999999999999999999999998654 48999999975
Q ss_pred ----CCc---c----cccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000872 754 ----KNQ---E----TFTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-LRQAL 819 (1245)
Q Consensus 754 ----~~~---~----~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 819 (1245)
... . ..++.++|++|++. ..+.+|+.|++.+..... . .....+.++.++++++.+|+.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-G-ARHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-c-ccchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 322 1 12346899999874 345679999986542211 1 1111234466789999999963 44443
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 820 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 820 ~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+..|+
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~ 218 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQR 218 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 3569999999999999999999999999999999999999999999998654 899999999975 44455565
No 470
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=99.97 E-value=1.5e-30 Score=287.82 Aligned_cols=184 Identities=23% Similarity=0.333 Sum_probs=151.8
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
-++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAP--DEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCc--
Confidence 367888887653 23599999999999999999999999999999999998654 4899999872
Q ss_pred CcccccceEEEEccCCCCCCC--CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000872 755 NQETFTRISGYCEQNDIHSPY--VTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQ 832 (1245)
Q Consensus 755 ~~~~~~~~~~~v~q~~~~~~~--ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGe 832 (1245)
..++|++|+..+.+. .|+.|++.+. ... .++.+.++++.+|+.+..+..+ +.|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~----~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGT----KKEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------ccc----cHHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877665 4777776431 111 1234688999999988766543 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhhh
Q 000872 833 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 833 rqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+..|+
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~ 190 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDE 190 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999999999999999999999999998765 899999999986 45556676
No 471
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.7e-31 Score=294.24 Aligned_cols=195 Identities=19% Similarity=0.321 Sum_probs=151.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCC--CCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDS--SLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++| ....+|+|.++|+++... ..++.++|++|++.+++. ||+||+.+...
T Consensus 40 ~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 118 (259)
T PRK14274 40 VTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPR 118 (259)
T ss_pred EEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHH
Confidence 4799999999999999999999863 212489999999987421 124579999999888875 99999987643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+... .. +....++++++.+|+.+...... +..+++||||||||+
T Consensus 119 ~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~l-~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 119 IHGTKN---------KK------------------------KLQEIVEKSLKDVALWDEVKDRL-HTQALSLSGGQQQRL 164 (259)
T ss_pred hcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhhhhh-hCCcccCCHHHHHHH
Confidence 221000 00 00122455677777753211111 233456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||+|+.+|+++||||||+|||+.++..+.+.|++++. +.++++++|+.+++.+.||++++|++|+++.+|+++++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999998853 45778899999999999999999999999999998876
No 472
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=99.97 E-value=1.2e-30 Score=289.12 Aligned_cols=182 Identities=24% Similarity=0.344 Sum_probs=152.2
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCCCCCCCCHH
Q 000872 703 LLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVTVY 779 (1245)
Q Consensus 703 ~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~ 779 (1245)
+|+|+|+++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.+... ..+++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 27999999987643 23345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh-------CCCeeEEe
Q 000872 780 ESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVA-------NPSIIFMD 852 (1245)
Q Consensus 780 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~-------~p~il~lD 852 (1245)
|++.+.... ....++..+.++++++.+|+.+..+..+ +.||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1222334566889999999987666543 4699999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 853 EPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 853 EpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+|||+.++..+.+.|++++++|+|||+++|++. ++-+..|+
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~ 202 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADR 202 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 999999999999999999998777899999999986 44556665
No 473
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=2.5e-31 Score=257.56 Aligned_cols=183 Identities=24% Similarity=0.334 Sum_probs=155.0
Q ss_pred ccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCC-------------cc---ccc
Q 000872 697 HDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKN-------------QE---TFT 760 (1245)
Q Consensus 697 ~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~-------------~~---~~~ 760 (1245)
+++...+||+||+..+.|+++.|+|.|||||||+|+|+.-... +..|.|.+||..+. .. ..|
T Consensus 15 ~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~R 92 (256)
T COG4598 15 RYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLR 92 (256)
T ss_pred hcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHH
Confidence 4566789999999999999999999999999999999986544 34899999996531 11 123
Q ss_pred ceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHH
Q 000872 761 RISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAV 840 (1245)
Q Consensus 761 ~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~ 840 (1245)
...|+|+|.-.++..+||.||+.-+. .+. .+.++.+..++.+..++.+|+.+.+|.... .|||||+||++|||
T Consensus 93 s~L~mVFQ~FNLWsHmtvLeNViEaP-vhV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~-----~LSGGQQQR~aIAR 165 (256)
T COG4598 93 TRLGMVFQHFNLWSHMTVLENVIEAP-VHV-LGVSKAEAIERAEKYLAKVGIAEKADAYPA-----HLSGGQQQRVAIAR 165 (256)
T ss_pred HHhhHhhhhcchhHHHHHHHHHHhcc-hHh-hcCCHHHHHHHHHHHHHHhCchhhhhcCcc-----ccCchHHHHHHHHH
Confidence 35699999999999999999986432 111 235667777888999999999998886643 59999999999999
Q ss_pred HHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000872 841 ELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPS 888 (1245)
Q Consensus 841 ~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~ 888 (1245)
||+-+|+++++|||||.||++---++.+.+++++++|+|.+++||...
T Consensus 166 aLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~ 213 (256)
T COG4598 166 ALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMG 213 (256)
T ss_pred HHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehh
Confidence 999999999999999999999999999999999999999999999643
No 474
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=319.10 Aligned_cols=189 Identities=23% Similarity=0.309 Sum_probs=156.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCcc----cccceEEEEccCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQE----TFTRISGYCEQNDIHSPYV 776 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~~----~~~~~~~~v~q~~~~~~~l 776 (1245)
+.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998654 489999999876421 2346789999998888899
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000872 777 TVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 856 (1245)
Q Consensus 777 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTs 856 (1245)
||.|++.+............++..++++++++.+|+.+..+..+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123334457889999999987666553 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 857 GLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 857 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||+.+...+.+.|++++++|+|||+++|++. ++.+..|+
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~ 203 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDE 203 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 99999999999999999878999999999985 44455676
No 475
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.2e-31 Score=296.15 Aligned_cols=190 Identities=21% Similarity=0.295 Sum_probs=155.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccc-cCCCCCHHHHHHHHHhccC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDI-HIGEMTVRETLAFSARCQG 76 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~~Tv~e~l~f~~~~~~ 76 (1245)
+++|+|+||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. .++..||.||+.++....+
T Consensus 35 ~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (277)
T PRK13642 35 WVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQG 111 (277)
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHcC
Confidence 47999999999999999999999987 999999998875422 2457999999974 5778899999987543211
Q ss_pred CCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHH
Q 000872 77 VGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTG 156 (1245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia 156 (1245)
. ... +..+.++++++.+||.+..++.+. .||||||||++||
T Consensus 112 ~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~lA 152 (277)
T PRK13642 112 I----------PRE------------------------EMIKRVDEALLAVNMLDFKTREPA-----RLSGGQKQRVAVA 152 (277)
T ss_pred C----------CHH------------------------HHHHHHHHHHHHCCCHhHhhCCcc-----cCCHHHHHHHHHH
Confidence 0 000 011235668888899877666554 5999999999999
Q ss_pred HHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 157 EMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 157 ~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||+.+|+++||||||+|||+.++..+.+.|+++++. .++++++++|+.+++. .+|++++|++|++++.|+++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEK-YQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999988653 3567788999999886 59999999999999999987763
No 476
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=294.50 Aligned_cols=196 Identities=18% Similarity=0.279 Sum_probs=151.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.+++ .|++||+.+...
T Consensus 41 ~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~ 119 (260)
T PRK10744 41 VTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVR 119 (260)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHh
Confidence 479999999999999999999986 2112389999999887421 12457999999988777 899999987643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.... .+ .. +....++++++.+||.+...... ++....||||||||+
T Consensus 120 ~~~~---~~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv 165 (260)
T PRK10744 120 LFEK---LS------RA------------------------EMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRL 165 (260)
T ss_pred hcCC---CC------HH------------------------HHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHH
Confidence 2100 00 00 00123456777777743111111 123446999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|++++. +.++++++|+.+++..++|++++|++|+++..|+.+++
T Consensus 166 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 166 CIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ---DYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998852 45788899999999999999999999999999988776
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 243 ~ 243 (260)
T PRK10744 243 F 243 (260)
T ss_pred H
Confidence 3
No 477
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=99.97 E-value=3.8e-31 Score=289.84 Aligned_cols=202 Identities=24% Similarity=0.343 Sum_probs=155.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++++++.++.. .++.+|+|+|+.+++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 78 (226)
T cd03248 11 IVKFQNVTFAYPTR----------PDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQP--QGGQVLLDGKPI 78 (226)
T ss_pred eEEEEEEEEEeCCC----------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCcEEEECCCch
Confidence 47889998876321 123599999999999999999999999999999999998654 489999999865
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc--CCcccccccccCCCCCcCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELV--ELNPLRQALVGLPGVNGLS 829 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l--~l~~~~~~~~g~~~~~~lS 829 (1245)
.. ..+++.++|++|+..+++ .|++||+.+..................+++.++.+ |+.+..+.. .+.||
T Consensus 79 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~-----~~~LS 152 (226)
T cd03248 79 SQYEHKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEK-----GSQLS 152 (226)
T ss_pred HHcCHHHHHhhEEEEecccHHHh-hhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcC-----CCcCC
Confidence 32 234567999999987765 69999997643211000000011112356777777 666554443 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 830 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 830 gGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++. + +..|+
T Consensus 153 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~ 217 (226)
T cd03248 153 GGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLST-V-ERADQ 217 (226)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHH-H-HhCCE
Confidence 9999999999999999999999999999999999999999999865 6899999999863 3 33665
No 478
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.5e-30 Score=279.89 Aligned_cols=208 Identities=22% Similarity=0.307 Sum_probs=166.1
Q ss_pred EEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-C-C-eeEEEEEECCe
Q 000872 676 LTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKT-R-G-YITGNITISGY 752 (1245)
Q Consensus 676 l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~-~-~-~~~G~i~~~g~ 752 (1245)
++.+|++.++... .+...+++||||++++||++||+|.|||||||+.++|.|..+ + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4677887776532 123469999999999999999999999999999999999775 2 3 46789999998
Q ss_pred eCC---ccc----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHHcCCcccccccccC
Q 000872 753 PKN---QET----FTRISGYCEQNDI--HSPYVTVYESLLYSAWLRLSSEV-NSKTREMFVEEVMELVELNPLRQALVGL 822 (1245)
Q Consensus 753 ~~~---~~~----~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~lr~~~~~-~~~~~~~~v~~~l~~l~l~~~~~~~~g~ 822 (1245)
++- ++. +.+.+++++|++. +.|.+||.+.+.=...... .. .+++..+++.++++.+|+.+-.... +
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~--~ 148 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRL--K 148 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHH--h
Confidence 642 221 2357999999965 6788999888765544322 22 3556677889999999998753222 2
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhhh
Q 000872 823 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 823 ~~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.....|||||||||.||.||+.+|++|+.||||++||...+.+|++.|+++.+ .|.|+|++|||.. -+.+..|+
T Consensus 149 ~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDr 223 (316)
T COG0444 149 SYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADR 223 (316)
T ss_pred hCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcce
Confidence 23467999999999999999999999999999999999999999999999986 5999999999986 45667777
No 479
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.97 E-value=3.3e-31 Score=328.82 Aligned_cols=186 Identities=25% Similarity=0.408 Sum_probs=151.1
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCcc---cceEEEeccccccCCCCCHHHHHHHHHhccCC
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFVP---QRTAAYISQHDIHIGEMTVRETLAFSARCQGV 77 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~ 77 (1245)
.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+++ .|++||+.++..-
T Consensus 368 ~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~~~--- 440 (574)
T PRK11160 368 KVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAAPN--- 440 (574)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCCCc---
Confidence 37999999999999999999999988 9999999998876543 567999999988765 6999999875310
Q ss_pred CCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCC------cccccccccCccccccccccch
Q 000872 78 GSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDL------DVCADTVVGDEMLRGISGGQRK 151 (1245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~~t~vg~~~~~~LSGGqrq 151 (1245)
... +.+++.++..|+ ++..||.+|+++. +|||||||
T Consensus 441 ---------~~~----------------------------~~i~~al~~~~l~~~i~~p~GldT~vge~g~-~LSgGqrq 482 (574)
T PRK11160 441 ---------ASD----------------------------EALIEVLQQVGLEKLLEDDKGLNAWLGEGGR-QLSGGEQR 482 (574)
T ss_pred ---------cCH----------------------------HHHHHHHHHcCCHHHHcCccccCchhcCCCC-CCCHHHHH
Confidence 000 001122222222 5678999997644 69999999
Q ss_pred hhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChh
Q 000872 152 RVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLE 231 (1245)
Q Consensus 152 Rv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~ 231 (1245)
|++||||++++|++++||||||+||+.++..+.+.|+++.+ ++|+++++|+.+.+ ..||+|++|++|++++.|+++
T Consensus 483 RialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~---~~tviiitHr~~~~-~~~d~i~~l~~G~i~~~g~~~ 558 (574)
T PRK11160 483 RLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ---NKTVLMITHRLTGL-EQFDRICVMDNGQIIEQGTHQ 558 (574)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC---CCEEEEEecChhHH-HhCCEEEEEeCCeEEEeCCHH
Confidence 99999999999999999999999999999999999988742 45666678887766 459999999999999999998
Q ss_pred hHHH
Q 000872 232 HVEQ 235 (1245)
Q Consensus 232 ~~~~ 235 (1245)
++.+
T Consensus 559 ~l~~ 562 (574)
T PRK11160 559 ELLA 562 (574)
T ss_pred HHHh
Confidence 8753
No 480
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=99.97 E-value=6.7e-31 Score=328.55 Aligned_cols=198 Identities=24% Similarity=0.342 Sum_probs=163.1
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++++++. .++++|+|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 330 ~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~i 396 (571)
T TIGR02203 330 DVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHDL 396 (571)
T ss_pred eEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEeH
Confidence 6899999998742 123699999999999999999999999999999999998764 489999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPL-------RQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~g~~~ 824 (1245)
++ ..+++.++|++|++.+++ -|++||+.+.. +.+.+ +++++++++.+|+.+. .||.+|..
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~- 466 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN- 466 (571)
T ss_pred HhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC-
Confidence 43 456788999999998775 59999997542 11122 3446777888877543 35667654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhhc
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDAG 898 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~~ 898 (1245)
.+.||||||||++|||+++++|+|++||||||+||..++..+.+.|++.+ +++|+|+++|+|+ ..+.+|+.
T Consensus 467 g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~i 537 (571)
T TIGR02203 467 GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRI 537 (571)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEE
Confidence 45799999999999999999999999999999999999999999999875 5799999999984 45677773
No 481
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=99.97 E-value=9.4e-31 Score=292.34 Aligned_cols=191 Identities=23% Similarity=0.349 Sum_probs=153.3
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCcc-----CCCCcc-------cceEEEeccccc--cCCCCCHHH
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHD-----MHEFVP-------QRTAAYISQHDI--HIGEMTVRE 66 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~Q~~~--~~~~~Tv~e 66 (1245)
+++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|++. +.+.+|+.|
T Consensus 34 ~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~ 110 (258)
T PRK11701 34 VLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGG 110 (258)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHH
Confidence 47999999999999999999999987 9999999987 543221 245999999873 577789999
Q ss_pred HHHHHHhccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcc-cccccccCcccccc
Q 000872 67 TLAFSARCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDV-CADTVVGDEMLRGI 145 (1245)
Q Consensus 67 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~vg~~~~~~L 145 (1245)
|+.+....... . .. . +.+..++++++.+|+.+ ..++.+ ..|
T Consensus 111 ~i~~~~~~~~~--~-------~~-~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~~L 152 (258)
T PRK11701 111 NIGERLMAVGA--R-------HY-G-----------------------DIRATAGDWLERVEIDAARIDDLP-----TTF 152 (258)
T ss_pred HHHHHHHHhcc--C-------cH-H-----------------------HHHHHHHHHHHHcCCChhHHhCCC-----ccC
Confidence 99764321100 0 00 0 01123466888899864 455444 459
Q ss_pred ccccchhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEE
Q 000872 146 SGGQRKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIV 225 (1245)
Q Consensus 146 SGGqrqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv 225 (1245)
|||||||++|||||+.+|+++||||||+|||+.+...+.+.|+++++. .+.++++++|+.+++...+|++++|++|+++
T Consensus 153 S~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~~~~d~i~~l~~g~i~ 231 (258)
T PRK11701 153 SGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVARLLAHRLLVMKQGRVV 231 (258)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988653 3678888999999999999999999999999
Q ss_pred EecChhhH
Q 000872 226 YQGPLEHV 233 (1245)
Q Consensus 226 ~~G~~~~~ 233 (1245)
+.|+++++
T Consensus 232 ~~~~~~~~ 239 (258)
T PRK11701 232 ESGLTDQV 239 (258)
T ss_pred EeCCHHHH
Confidence 99988775
No 482
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.3e-31 Score=291.80 Aligned_cols=196 Identities=20% Similarity=0.332 Sum_probs=150.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~ 111 (252)
T PRK14239 33 ITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLR 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHH
Confidence 479999999999999999999853 4212389999999877421 22457999999988776 899999998643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+.. .. . .....++.+++.+|+.+...+.. ++.+..||||||||+
T Consensus 112 ~~~~~--~~-------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv 157 (252)
T PRK14239 112 LKGIK--DK-------Q------------------------VLDEAVEKSLKGASIWDEVKDRL-HDSALGLSGGQQQRV 157 (252)
T ss_pred HcCCC--cH-------H------------------------HHHHHHHHHHHHcCCchhHHHHH-hcCcccCCHHHHHHH
Confidence 22100 00 0 00112345666777643111111 233456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.+ ++++++++|+.+++...||++++|++|++++.|+.+++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD---DYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh---CCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998853 36788899999999999999999999999999998876
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 235 ~ 235 (252)
T PRK14239 235 F 235 (252)
T ss_pred H
Confidence 3
No 483
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=99.97 E-value=9.2e-31 Score=327.11 Aligned_cols=195 Identities=26% Similarity=0.339 Sum_probs=161.3
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 334 ~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~i 399 (588)
T PRK13657 334 AVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTDI 399 (588)
T ss_pred eEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEEh
Confidence 6899999998741 13599999999999999999999999999999999998764 489999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 824 (1245)
++ ..+++.++||+|++.+++ -|++||+.++. + +.+ ++.++++++.+++.+ -.||.+|..
T Consensus 400 ~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~-~~~----d~~i~~al~~~~l~~~i~~lp~gldt~i~~~- 468 (588)
T PRK13657 400 RTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR----P-DAT----DEEMRAAAERAQAHDFIERKPDGYDTVVGER- 468 (588)
T ss_pred hhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC----C-CCC----HHHHHHHHHHhCHHHHHHhCcccccchhcCC-
Confidence 53 456788999999998875 59999997641 1 222 233566677766654 246666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
.+.||||||||++|||+|+++|+|++||||||+||+.++..+.+.|++.. +++|||+++|+|+ ..+.+|+
T Consensus 469 g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~--~~~~~D~ 538 (588)
T PRK13657 469 GRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLS--TVRNADR 538 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHH--HHHhCCE
Confidence 45699999999999999999999999999999999999999999999875 4799999999984 4577887
No 484
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=6.4e-31 Score=288.82 Aligned_cols=196 Identities=25% Similarity=0.381 Sum_probs=151.2
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|+++.+. +.+.+++|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 467888887652 123599999999999999999999999999999999998654 489999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALV-G-----LPGV 825 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~-g-----~~~~ 825 (1245)
.. ..+++.++|++|+..+++. |+.|++.+... ... ...+++.++.+++.+..+... | ....
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 42 2345679999999877765 99999976421 111 122344555555544333221 0 1124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 826 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 826 ~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. +|+|||+++|++.. + +..|+
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~ 206 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADK 206 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCE
Confidence 6799999999999999999999999999999999999999999999985 58999999999863 3 34565
No 485
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1e-30 Score=290.98 Aligned_cols=196 Identities=22% Similarity=0.369 Sum_probs=151.9
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|..+|. ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++..
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~ 109 (250)
T PRK14262 31 ITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPR 109 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHH
Confidence 47999999999999999999998741 12389999999876431 12457999999988877 899999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+... .. ..++.+++.++.+|+.+..+.. .++.+.+||||||||+
T Consensus 110 ~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 110 IHGVKS---------KH------------------------KLDRIVEESLKKAALWDEVKSE-LNKPGTRLSGGQQQRL 155 (250)
T ss_pred HcCCCc---------HH------------------------HHHHHHHHHHHHcCCCchhHHH-HhCChhhcCHHHHHHH
Confidence 221000 00 0011234566777775321111 1334557999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++++++++|+.+++...+|++++|++|+++..|+.+++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE---NYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc---CcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999998853 36788899999999999999999999999999998776
Q ss_pred H
Q 000872 234 E 234 (1245)
Q Consensus 234 ~ 234 (1245)
.
T Consensus 233 ~ 233 (250)
T PRK14262 233 V 233 (250)
T ss_pred H
Confidence 4
No 486
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=6.8e-31 Score=289.62 Aligned_cols=180 Identities=27% Similarity=0.331 Sum_probs=141.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCCCCCCCCH
Q 000872 702 VLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVTV 778 (1245)
Q Consensus 702 ~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv 778 (1245)
.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 589999999999999999999999999999999998654 48999999987532 234567899999988776 699
Q ss_pred HHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000872 779 YESLLYSAWLRLSSEVNSKTRE-----MFVEEVMELV--ELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 851 (1245)
Q Consensus 779 ~e~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~l 851 (1245)
+|++.+.... ....+.. ..+++.++.+ ++.+..+.. ...||||||||++||++|+.+|++++|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999764321 1111111 1233444444 444433322 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 852 DEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 852 DEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
||||+|||+.+...+.+.|+++. +|+|||+++|++.. + +..|+
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~ 205 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLST-I-ENADR 205 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCE
Confidence 99999999999999999999986 48999999999963 3 33665
No 487
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=9.2e-31 Score=291.33 Aligned_cols=196 Identities=19% Similarity=0.334 Sum_probs=152.0
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+||||||||+++|+|..+ |....+|+|.++|+++... ..++.++|++|++.+++. |++||+.+...
T Consensus 33 ~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~ 111 (251)
T PRK14244 33 VTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPK 111 (251)
T ss_pred EEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHH
Confidence 479999999999999999999975 2112389999999876432 124579999999888875 99999987643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
...... . .. +....++++++.+||.+...+.. +..+.+||||||||+
T Consensus 112 ~~~~~~--~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 112 LHGLAK--N------KK------------------------KLDEIVEKSLTSVGLWEELGDRL-KDSAFELSGGQQQRL 158 (251)
T ss_pred hcCCCC--C------HH------------------------HHHHHHHHHHHHcCCCchhhhHh-hcChhhCCHHHHHHH
Confidence 221000 0 00 00122456788888865322222 123456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++.+ ++++++++|+.+++.+.||++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK---NFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998742 56788899999999999999999999999999988766
No 488
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=99.97 E-value=1.1e-30 Score=323.14 Aligned_cols=197 Identities=27% Similarity=0.408 Sum_probs=158.5
Q ss_pred EEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeC
Q 000872 675 SLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPK 754 (1245)
Q Consensus 675 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~ 754 (1245)
.++++|++++++. +++++|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 316 ~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~i 382 (544)
T TIGR01842 316 HLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGADL 382 (544)
T ss_pred eEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeh
Confidence 6899999998731 124689999999999999999999999999999999998664 489999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000872 755 NQ---ETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNP-------LRQALVGLPG 824 (1245)
Q Consensus 755 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~g~~~ 824 (1245)
.. ..+++.++||+|++.+++. |++||+.+.. .+.+++ .++++++..++.+ -.|+.+|..
T Consensus 383 ~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~- 451 (544)
T TIGR01842 383 KQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPE----KIIEAAKLAGVHELILRLPDGYDTVIGPG- 451 (544)
T ss_pred hhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHH----HHHHHHHHhChHHHHHhCccccccccCCC-
Confidence 43 3567889999999988875 9999997432 112222 2344444444432 235666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 825 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 825 ~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
...||||||||++|||+|+++|++|+|||||||||+.++..+.+.|+++..+|+|+|+++|+++ ..+.+|+
T Consensus 452 g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~ 522 (544)
T TIGR01842 452 GATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDK 522 (544)
T ss_pred cCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCE
Confidence 4569999999999999999999999999999999999999999999988656899999999986 3466776
No 489
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.9e-30 Score=287.60 Aligned_cols=205 Identities=22% Similarity=0.255 Sum_probs=159.2
Q ss_pred eEEEEEeEEEEEecCccccccccccCcceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--C-eeEEEEEEC
Q 000872 674 FSLTFDEITYSVDMPQEMKRRGVHDDKLVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTR--G-YITGNITIS 750 (1245)
Q Consensus 674 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~--~-~~~G~i~~~ 750 (1245)
..+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3588999988763 23599999999999999999999999999999999997543 1 258999999
Q ss_pred CeeCC-------cccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000872 751 GYPKN-------QETFTRISGYCEQNDIHSPYVTVYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQALVGLP 823 (1245)
Q Consensus 751 g~~~~-------~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~g~~ 823 (1245)
|.+.+ ...+++.++|++|+..+++. |++|++.+...... .......++.++++++.+++.+....... .
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~ 157 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG--VKRRSILEERVENALRNAALWDEVKDRLG-D 157 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC--CChHHHHHHHHHHHHHHcCCchhhhHHHh-C
Confidence 97642 12345678999999888875 99999987643321 11112234567788888887521111111 1
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 824 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 824 ~~~~lSgGerqr~~ia~~l~~~p~il~lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
....||||||||++|||+|+.+|++++|||||+|||..+...+.+.|+++++ ++|||+++|++. ++.+..|+
T Consensus 158 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~ 229 (265)
T PRK14252 158 LAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDY 229 (265)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCE
Confidence 2356999999999999999999999999999999999999999999999865 699999999985 45556676
No 490
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=7.4e-31 Score=249.59 Aligned_cols=188 Identities=26% Similarity=0.359 Sum_probs=154.4
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCC---------cccceEEEeccccccCCCCCHHHHHHHHH
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEF---------VPQRTAAYISQHDIHIGEMTVRETLAFSA 72 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~---------~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~ 72 (1245)
+.++||||+|||||++.|.=+..|. +|+..+.|...+-. ..++.+|+|+|+-.++|.+||.||+.-+.
T Consensus 31 lvllgpsgagkssllr~lnlle~p~---sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap 107 (242)
T COG4161 31 LVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAP 107 (242)
T ss_pred EEEECCCCCchHHHHHHHHHHhCCC---CCeEEecccccccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhh
Confidence 5789999999999999998776676 99999987643211 12467999999999999999999997532
Q ss_pred hccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchh
Q 000872 73 RCQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKR 152 (1245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqR 152 (1245)
++ +..++ ..++.....++++.|.|.+.+|...- .|||||+||
T Consensus 108 -~k--------v~gl~------------------------~~qa~~~a~ellkrlrl~~~adr~pl-----hlsggqqqr 149 (242)
T COG4161 108 -CR--------VLGLS------------------------KDQALARAEKLLKRLRLKPYADRYPL-----HLSGGQQQR 149 (242)
T ss_pred -HH--------HhCCC------------------------HHHHHHHHHHHHHHhccccccccCce-----ecccchhhh
Confidence 11 00011 11233456779999999998885443 499999999
Q ss_pred hHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhh
Q 000872 153 VTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEH 232 (1245)
Q Consensus 153 v~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~ 232 (1245)
|+|||||+.+|++|++||||++|||.-..++.+.+++++. .|.|-++++|..+.+.+.+.+|+-|++|+|++.|+.+.
T Consensus 150 vaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~--tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~ 227 (242)
T COG4161 150 VAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAE--TGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHh--cCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhh
Confidence 9999999999999999999999999999999999999986 46677779999999999999999999999999998654
No 491
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.5e-30 Score=292.42 Aligned_cols=196 Identities=23% Similarity=0.326 Sum_probs=153.6
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC----cccceEEEeccccccCCCCCHHHHHHHHHhc
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF----VPQRTAAYISQHDIHIGEMTVRETLAFSARC 74 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~ 74 (1245)
+++|+||||||||||+++|+|+++|. ...+|+|.++|.++... ..++.++|++|++.+++ .|++||+.++...
T Consensus 49 ~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~ 127 (276)
T PRK14271 49 VTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRA 127 (276)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHh
Confidence 47999999999999999999998751 02389999999887542 12467999999988787 8999999876432
Q ss_pred cCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhH
Q 000872 75 QGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVT 154 (1245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ 154 (1245)
.. .. ... +....++++++.+||.+..++.. +..+..||||||||++
T Consensus 128 ~~---~~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~l-~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 128 HK---LV------PRK------------------------EFRGVAQARLTEVGLWDAVKDRL-SDSPFRLSGGQQQLLC 173 (276)
T ss_pred cc---CC------CHH------------------------HHHHHHHHHHHHcCCCchhhhHh-hCCcccCCHHHHHHHH
Confidence 10 00 000 00112345677788865332222 1334569999999999
Q ss_pred HHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHH
Q 000872 155 TGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVE 234 (1245)
Q Consensus 155 ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~ 234 (1245)
|||||+.+|+++||||||+|||+.++..+.+.|+++++ + .+|++++|+.+++.+.+|++++|++|++++.|+++++.
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999998864 3 57888999999999999999999999999999988764
No 492
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=290.47 Aligned_cols=195 Identities=23% Similarity=0.372 Sum_probs=149.4
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCC--CCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDS--SLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|..++ ....+|+|.++|+++... ..++.++|++|++.+++ .|++||+.++..
T Consensus 31 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~ 109 (250)
T PRK14240 31 VTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPR 109 (250)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHH
Confidence 4799999999999999999998753 112489999999887531 12456999999988777 899999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+... .. +.++.++++++.+++.+...... +..+..||||||||+
T Consensus 110 ~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~G~~qrv 155 (250)
T PRK14240 110 THGIKD---------KK------------------------KLDEIVEKSLKGAALWDEVKDRL-KKSALGLSGGQQQRL 155 (250)
T ss_pred hcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhHHHH-hcCCCCCCHHHHHHH
Confidence 221100 00 00122344566666542111111 123446999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++++++++|+.+++...+|++++|++|++++.|+.+++
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 156 CIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK---DYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998843 45788899999999999999999999999999988765
No 493
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.4e-30 Score=290.30 Aligned_cols=193 Identities=23% Similarity=0.353 Sum_probs=150.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL--KASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.+++.+|++||+.++..
T Consensus 32 ~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~ 111 (252)
T PRK14272 32 VNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLK 111 (252)
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHH
Confidence 479999999999999999999987531 1379999999887531 124569999999999999999999987543
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD----VCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1245)
.... .. . + +..+.++++++.+++. +..++. ++.|||||
T Consensus 112 ~~~~---~~------~-~-----------------------~~~~~~~~~l~~~~l~~~l~~~~~~~-----~~~LS~G~ 153 (252)
T PRK14272 112 LAGI---RD------R-D-----------------------HLMEVAERSLRGAALWDEVKDRLKTP-----ATGLSGGQ 153 (252)
T ss_pred hcCC---CC------H-H-----------------------HHHHHHHHHHHHcCcchhhhhhhcCC-----cccCCHHH
Confidence 2110 00 0 0 0011123344444442 223433 44699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++++++++|+.+++.+.||++++|++|++++.|+
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 230 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK---VTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGP 230 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998853 4678889999999999999999999999999999
Q ss_pred hhhHH
Q 000872 230 LEHVE 234 (1245)
Q Consensus 230 ~~~~~ 234 (1245)
++++.
T Consensus 231 ~~~~~ 235 (252)
T PRK14272 231 TDQLF 235 (252)
T ss_pred HHHHH
Confidence 87763
No 494
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.1e-31 Score=293.89 Aligned_cols=194 Identities=20% Similarity=0.310 Sum_probs=147.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL--KASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.+++ .||+||+.+...
T Consensus 41 ~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~ 119 (269)
T PRK14259 41 VTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGAR 119 (269)
T ss_pred EEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhh
Confidence 479999999999999999999986310 1399999999876421 12356999999998887 599999998654
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+. . .. .+..++++++.+++........ +..+..||||||||+
T Consensus 120 ~~~~----~------~~-------------------------~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~G~~qrl 163 (269)
T PRK14259 120 INGY----T------GD-------------------------MDELVERSLRKAAVWDECKDKL-NESGYSLSGGQQQRL 163 (269)
T ss_pred hcCC----c------HH-------------------------HHHHHHHHHHHhCCcchhhhhh-CCCcccCCHHHHHHH
Confidence 3210 0 00 0011234556665532111111 233456999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecC-----------C
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSD-----------G 222 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~-----------G 222 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++++ +.++++++|+.+++...||++++|++ |
T Consensus 164 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 164 CIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 999999999999999999999999999999999998853 46788899999999999999999996 6
Q ss_pred cEEEecChhhHH
Q 000872 223 QIVYQGPLEHVE 234 (1245)
Q Consensus 223 ~iv~~G~~~~~~ 234 (1245)
++++.|+++++.
T Consensus 241 ~~~~~~~~~~~~ 252 (269)
T PRK14259 241 YLVEFNETKKIF 252 (269)
T ss_pred eEEEeCCHHHHH
Confidence 689999888763
No 495
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=99.97 E-value=2.3e-31 Score=339.83 Aligned_cols=190 Identities=25% Similarity=0.337 Sum_probs=149.5
Q ss_pred EEEeCCCCCChHHHHHHHhCCCCCCCceeeEEEECCccCCCCc---ccceEEEeccccccCCCCCHHHHHHHHHhccCCC
Q 000872 2 TLLLGPPGSGKTTLMLALAGKLDSSLKASGKVTYNGHDMHEFV---PQRTAAYISQHDIHIGEMTVRETLAFSARCQGVG 78 (1245)
Q Consensus 2 ~~ilG~~GsGKSTLL~~l~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~~~~~~ 78 (1245)
++|+||||||||||+++|+|.++|+ +|+|.+||.++.+.. .++.++||+|++.++ +.|++|||.++..
T Consensus 508 vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~gTi~eNi~l~~~----- 578 (710)
T TIGR03796 508 VALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EGTVRDNLTLWDP----- 578 (710)
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hccHHHHhhCCCC-----
Confidence 7999999999999999999999988 999999999886554 367899999998866 5699999986421
Q ss_pred CccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhhHHHHH
Q 000872 79 SRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRVTTGEM 158 (1245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv~ia~a 158 (1245)
+ .+ ..+..+.. ... ..++.+ -.+++..||.+|+++ .+||||||||++||||
T Consensus 579 ~-~~----~~~i~~al---------------~~~------~l~~~i--~~lp~gl~t~i~e~G-~~LSGGQrQRiaLARa 629 (710)
T TIGR03796 579 T-IP----DADLVRAC---------------KDA------AIHDVI--TSRPGGYDAELAEGG-ANLSGGQRQRLEIARA 629 (710)
T ss_pred C-CC----HHHHHHHH---------------HHh------CCHHHH--HhCcCcccceeccCC-CCCCHHHHHHHHHHHH
Confidence 0 00 00000000 000 001111 136678899999765 4799999999999999
Q ss_pred HhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhHHH
Q 000872 159 LVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHVEQ 235 (1245)
Q Consensus 159 l~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~~~ 235 (1245)
|+++|+|++||||||+||+.++..+.+.|++ .++|+++++|+.+.+ ..||+|++|++|++++.|+++++.+
T Consensus 630 ll~~p~iliLDEptS~LD~~te~~i~~~l~~-----~~~T~IiitHrl~~i-~~~D~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 630 LVRNPSILILDEATSALDPETEKIIDDNLRR-----RGCTCIIVAHRLSTI-RDCDEIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred HhhCCCEEEEECccccCCHHHHHHHHHHHHh-----cCCEEEEEecCHHHH-HhCCEEEEEeCCEEEEecCHHHHHH
Confidence 9999999999999999999999999999975 145666788887655 5599999999999999999998854
No 496
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.2e-30 Score=294.70 Aligned_cols=192 Identities=20% Similarity=0.362 Sum_probs=149.2
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|..+ |....+|+|.++|.++... ..++.++|++|++.+++. ||+||+.++..
T Consensus 67 ~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~ 145 (286)
T PRK14275 67 VTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPR 145 (286)
T ss_pred EEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHH
Confidence 479999999999999999999854 3001299999999876432 124579999999888874 99999998653
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccccccCcccccccccc
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLD----VCADTVVGDEMLRGISGGQ 149 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~~t~vg~~~~~~LSGGq 149 (1245)
..+... . . ..+..++++++.+|+. +..+. .+..|||||
T Consensus 146 ~~~~~~---------~-~-----------------------~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LSgGq 187 (286)
T PRK14275 146 LHGIND---------K-K-----------------------QLEEIVEKSLRKAALWDEVSDRLDK-----NALGLSGGQ 187 (286)
T ss_pred hcCCCc---------H-H-----------------------HHHHHHHHHHHHhCCccchhhHhhC-----ChhhCCHHH
Confidence 221000 0 0 0011234456666663 22333 345699999
Q ss_pred chhhHHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecC
Q 000872 150 RKRVTTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGP 229 (1245)
Q Consensus 150 rqRv~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~ 229 (1245)
|||++|||||+.+|+++||||||+|||+.++..+.+.|++++. +++|++++|+.+++.+.||++++|++|+++..|+
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~ 264 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAP 264 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998853 3678889999999999999999999999999999
Q ss_pred hhhHH
Q 000872 230 LEHVE 234 (1245)
Q Consensus 230 ~~~~~ 234 (1245)
.+++.
T Consensus 265 ~~~~~ 269 (286)
T PRK14275 265 TAQLF 269 (286)
T ss_pred HHHHH
Confidence 87763
No 497
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.4e-30 Score=290.41 Aligned_cols=194 Identities=20% Similarity=0.265 Sum_probs=152.5
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCCC--ceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSSL--KASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|+||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.++ .+|++||+.++..
T Consensus 36 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~ 114 (261)
T PRK14263 36 ITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLR 114 (261)
T ss_pred EEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHh
Confidence 479999999999999999999997510 1389999999887431 2245699999998877 6999999998654
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.... . . +....++++++.+||.+..+...+ ...+.||||||||+
T Consensus 115 ~~~~----~--~-----------------------------~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv 158 (261)
T PRK14263 115 LNRY----K--G-----------------------------DLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRL 158 (261)
T ss_pred hcCc----h--H-----------------------------HHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHH
Confidence 2210 0 0 001124556777777543222222 34557999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEec--------CCcEE
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVS--------DGQIV 225 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~--------~G~iv 225 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++++++++|+.+++.++||++++|+ +|+++
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~---~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~ 235 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK---DYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLV 235 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEE
Confidence 999999999999999999999999999999999998842 4678889999999999999999995 89999
Q ss_pred EecChhhHH
Q 000872 226 YQGPLEHVE 234 (1245)
Q Consensus 226 ~~G~~~~~~ 234 (1245)
+.|+.+++.
T Consensus 236 ~~g~~~~~~ 244 (261)
T PRK14263 236 EMGPTAQIF 244 (261)
T ss_pred EeCCHHHHH
Confidence 999988763
No 498
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=291.17 Aligned_cols=195 Identities=21% Similarity=0.316 Sum_probs=152.7
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCCCC--CceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLDSS--LKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++..
T Consensus 48 ~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~ 126 (267)
T PRK14237 48 ITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALE 126 (267)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHH
Confidence 47999999999999999999998641 12399999999887431 12457999999988777 699999988643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
..+. .. .. +....++++++.++|.+..+... +..++.||||||||+
T Consensus 127 ~~~~---~~------~~------------------------~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~G~~qrl 172 (267)
T PRK14237 127 RAGV---KD------KK------------------------VLDEIVETSLKQAALWDQVKDDL-HKSALTLSGGQQQRL 172 (267)
T ss_pred hcCC---CC------HH------------------------HHHHHHHHHHHHcCCCchhhhhh-cCCcccCCHHHHHHH
Confidence 2110 00 00 01123455777888754322222 234557999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.++++++|+.+++.++||++++|++|++++.|+++++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK---NYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998842 46788899999999999999999999999999998776
No 499
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=99.97 E-value=8.4e-31 Score=289.52 Aligned_cols=181 Identities=29% Similarity=0.412 Sum_probs=140.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCeeEEEEEECCeeCCc---ccccceEEEEccCCCCCCCCC
Q 000872 701 LVLLNGVSGAFRPGVLTALMGVTGSGKTTLMDVLAGRKTRGYITGNITISGYPKNQ---ETFTRISGYCEQNDIHSPYVT 777 (1245)
Q Consensus 701 ~~~L~~vs~~i~~Ge~~ai~G~sGsGKsTLl~~L~g~~~~~~~~G~i~~~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 777 (1245)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|+..+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDP--TSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCC--CCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 3599999999999999999999999999999999998653 48999999987532 233466999999987776 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000872 778 VYESLLYSAWLRLSSEVNSKTREMFVEEVMELVELNPLRQA-------LVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 850 (1245)
Q Consensus 778 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~g~~~~~~lSgGerqr~~ia~~l~~~p~il~ 850 (1245)
++|++.+....+ ..+ ..++.++..++.+..+. ... ...+.||||||||++||++|+.+|++++
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999997642111 111 12233333333322111 111 1245799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhhh
Q 000872 851 MDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDA 897 (1245)
Q Consensus 851 lDEpTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~p~~~~~~~fd~ 897 (1245)
|||||+|||+.++..+.+.|+++. +|+|||+++|++.. + +..|+
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~-~-~~~d~ 206 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLST-I-RNADL 206 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCE
Confidence 999999999999999999999986 78999999999863 3 35666
No 500
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=292.07 Aligned_cols=195 Identities=19% Similarity=0.307 Sum_probs=147.8
Q ss_pred CEEEeCCCCCChHHHHHHHhCCCC--CCCceeeEEEECCccCCCC-----cccceEEEeccccccCCCCCHHHHHHHHHh
Q 000872 1 MTLLLGPPGSGKTTLMLALAGKLD--SSLKASGKVTYNGHDMHEF-----VPQRTAAYISQHDIHIGEMTVRETLAFSAR 73 (1245)
Q Consensus 1 ~~~ilG~~GsGKSTLL~~l~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~~~Tv~e~l~f~~~ 73 (1245)
+++|+||||||||||+++|+|..+ |....+|+|.++|+++... ..++.++|++|++.+++. |++||+.++..
T Consensus 49 ~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~ 127 (268)
T PRK14248 49 VTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALK 127 (268)
T ss_pred EEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHH
Confidence 479999999999999999999864 1001399999999887532 124569999999888874 99999987643
Q ss_pred ccCCCCccchhhhhhHHHHhhhcCCCchhHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccccccccccchhh
Q 000872 74 CQGVGSRYDMLVELSRREKAAKIIPDADIDVFMKAVVREGQEANVITDYILKVLDLDVCADTVVGDEMLRGISGGQRKRV 153 (1245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqrqRv 153 (1245)
.... .. ... .+..++..++.+++.+...... +..+..||||||||+
T Consensus 128 ~~~~--~~-------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgGq~qrl 173 (268)
T PRK14248 128 YAGE--RR-------KSV------------------------LDEIVEESLTKAALWDEVKDRL-HSSALSLSGGQQQRL 173 (268)
T ss_pred hcCC--Cc-------HHH------------------------HHHHHHHHHHHcCCCcchHHHH-hcCcccCCHHHHHHH
Confidence 2110 00 000 0112344566666642110111 233446999999999
Q ss_pred HHHHHHhcCCcEeeeeCCCcCcChHHHHHHHHHHHHHhhhcCCEEEEEecCCChhHHhhccceEEecCCcEEEecChhhH
Q 000872 154 TTGEMLVGPAHALFMDEISTGLDSSTTFHIVNSLGQFNHILNGTALISLLQPAPEVYNLFDDIILVSDGQIVYQGPLEHV 233 (1245)
Q Consensus 154 ~ia~al~~~p~illLDEPtsgLD~~~~~~i~~~L~~~~~~~~~~~ii~i~~~~~~~~~~~D~v~vl~~G~iv~~G~~~~~ 233 (1245)
+|||||+.+|+++||||||+|||+.++..+.+.|+++++ +++|++++|+.+++.+.||++++|++|++++.|+.+++
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE---EYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999853 35788899999999999999999999999999988766
Done!