BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000873
(1245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana GN=RKP PE=2
SV=2
Length = 1280
Score = 1791 bits (4638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 872/1271 (68%), Positives = 1034/1271 (81%), Gaps = 40/1271 (3%)
Query: 1 MAEDGLRIGGLSSGLALILNGDDGKDNSSKSRFVSYCDDFGHQSVEQTLEYIFGLPNKSL 60
MAED LR+G +SSGLA++LNG+D K+NSSK+R V + D GH+ +E+T+E+IFGL KS+
Sbjct: 1 MAEDSLRVGMISSGLAVLLNGEDAKENSSKARIVPHFDYSGHRPLERTIEFIFGLAEKSV 60
Query: 61 GPLTCPVDNNLIRSIIKNDFSKCYLNSDAVVANRDGIGILENGSGPHIVGLEESSICGDV 120
GPL VD++LIR++IKN FSK + + D V+ R+GI ++ +G GP IVGLEE SICGD+
Sbjct: 61 GPLDGQVDSSLIRAVIKNQFSKLHGDLDVSVSQREGISVVHHGVGPPIVGLEEFSICGDI 120
Query: 121 RIAKLPLLVESLAMFSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGD 180
RI K PL++ESLA+FSSARAN C+WKGKWMYEV LETSG+QQLGWATL+CPFTD KGVGD
Sbjct: 121 RIVKPPLVLESLALFSSARANACIWKGKWMYEVALETSGIQQLGWATLACPFTDQKGVGD 180
Query: 181 ADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIR 240
ADDSYAFDGRRV KWNKEAEPYGQSWVAGD+IGCCIDL+ DEI FYRNGVSLG AF+GIR
Sbjct: 181 ADDSYAFDGRRVSKWNKEAEPYGQSWVAGDVIGCCIDLNCDEIYFYRNGVSLGAAFTGIR 240
Query: 241 KMGPGFGYYPAVSLSQGERCVLNFGARPFKYPINCYLPLQESPPVNVFATQLLQCLSRLL 300
K+GPGFGYYPA+SLSQGERC LNFGA PFKYP++ + PLQE+P FAT+LL+C SRLL
Sbjct: 241 KLGPGFGYYPAISLSQGERCELNFGAYPFKYPVDGFQPLQEAPTRFSFATELLRCFSRLL 300
Query: 301 GMDKAERSSVEKSRRLKRFVSLEKIFNPVSHGICEEFFSLLEADARIIEYVGWGILLSFM 360
D+ +RS + RL+RF S+E++F PVS IC+EFF +LE D + EY+G G LSF+
Sbjct: 301 --DRPDRSLADTLSRLRRFASVEELFCPVSSAICDEFFYILEQDPLLAEYLGRGAFLSFL 358
Query: 361 MEVFGLQVPHDYSSLDRVVDVFLQFQGSRSIFEHIIQALSCGCKTASMVLTECPYSGSYP 420
+E F Q PHD SSLD+V+DVFL+F S IFEH++ AL+CGCKTA+++LTECPYSG YP
Sbjct: 359 LETFRTQAPHDSSSLDKVLDVFLEFPQSHLIFEHVVNALACGCKTATLILTECPYSGPYP 418
Query: 421 YLALACHILRREELMVLWWNSLDFEFIFEGFLSRKNPNRQDLQCMIPSVWWPGSCEDISY 480
YLALACH+ +REELMV WW SL FEF+FEGFLS ++ N+ DLQ ++P VWWPGS EDISY
Sbjct: 419 YLALACHLFKREELMVQWWRSLHFEFLFEGFLSCRSSNKHDLQHLMPVVWWPGSSEDISY 478
Query: 481 ESSMMLTTTALSEAVSKIEEKHRELCLLVIQFIPPISPPQFPGSVFRTFIQNILLKNRGA 540
ESSM T +ALSEA++KIEEK R LCLLVIQFIPP+SPPQ PGS FR F+QN+LLKNRGA
Sbjct: 479 ESSMGFTISALSEAINKIEEKQRNLCLLVIQFIPPVSPPQLPGSAFRGFLQNLLLKNRGA 538
Query: 541 DRSLPPPGVSSNSVLVSLYTVILHFLSEGFAIGDTCSWLKRSEKNGCNVGFLHRGGQQSF 600
DR+L P GV+ NSVLVSL++VILHFLSEGFA+ LK SE NVGFLHRGGQQ F
Sbjct: 539 DRTLAPSGVTRNSVLVSLFSVILHFLSEGFAM------LKSSEAVHHNVGFLHRGGQQKF 592
Query: 601 PIGLFLKNDLLRADISRLGGSFSHLLKSHPVDDQDAEVIRWEEGYMDDEETRVCHLSEHK 660
P+ LFLKND RADI+RLGG FSH+ KS+P DDQ+ E++RWEEG MDDE+ RV H +E K
Sbjct: 593 PLSLFLKNDPHRADITRLGGLFSHISKSYPTDDQEEEIMRWEEGCMDDEQNRVTHATEQK 652
Query: 661 PCCCSSYDAEFVRSLKYPVRNATKGSRGHCSSVPERSAHVAAECSTGSLNDEIADKPSTS 720
PCCC +YD + +SLK +N + SRG CSS+PERS+HVAAECS GS ++EI DKPSTS
Sbjct: 653 PCCCLAYDTDLTKSLKDRGKNTAQSSRGRCSSIPERSSHVAAECSAGSFSEEIDDKPSTS 712
Query: 721 DQSESDFGYHPVRHTMTVLRESNMSAATLKEEELLDALLLLYHIGLAPNFKQASYYMSHQ 780
+QS+ DFGY PVR T L+ES +S+A L EEELLDALLLLYHI +APNFKQASYYMSHQ
Sbjct: 713 NQSDPDFGYRPVRFMRTALQESRISSAILSEEELLDALLLLYHIAVAPNFKQASYYMSHQ 772
Query: 781 SQSISLLEETDKQIRERACSEQLKRLKEARNNYREEVIDCVRHCAWYRISLFSRWKQRGM 840
SQSISLLEETDKQIRERA +Q+KRLKEARNNY+E+V+DCVRH AW+RISLFSRWKQRGM
Sbjct: 773 SQSISLLEETDKQIRERASCDQIKRLKEARNNYKEDVMDCVRHSAWFRISLFSRWKQRGM 832
Query: 841 YATCVWVVQLLLVLSKVDSVFIYIPEFYLEALV--------------------------- 873
YA C+WVVQLLLVLSK+DSVF+YIPEFYLE+LV
Sbjct: 833 YALCMWVVQLLLVLSKMDSVFVYIPEFYLESLVDCFHVLRKSDPPFVPSTTFIKQGLSSF 892
Query: 874 -TFVVTHFNDPRISSADLRDLLLQSISVLVQYKDYLAAFESNEAATLRLPKALISAFDNR 932
TFVVTHFND RIS+ DL+DLLLQSISVLVQYK+YL AFE+NEAAT +P AL++AFDNR
Sbjct: 893 ITFVVTHFNDSRISNTDLKDLLLQSISVLVQYKEYLEAFENNEAATRHMPAALLAAFDNR 952
Query: 933 SWIPVTNILLRLCKGHGFGSSKHGESSSSSVIFQRLLREACINDEGLFSTFLNRLFNTLS 992
SWIPVTNI LRLCKG GF S K+GESS SS +FQ LLR+ACIND L STFLNRLFNTLS
Sbjct: 953 SWIPVTNIFLRLCKGSGFSSLKNGESSFSSTVFQALLRDACINDGELLSTFLNRLFNTLS 1012
Query: 993 WTMTEFSISIREMQEKYQVSEFQQKKCCVIFDLSCNLTRVLEFCTHEIPQAFLSGTDTNL 1052
WT+TEFS+S+REMQEKYQV EFQQ+KCCVIF+LS NL RVLEFCT+ +PQAFL+GTDTNL
Sbjct: 1013 WTITEFSVSVREMQEKYQVMEFQQRKCCVIFELSSNLARVLEFCTYAMPQAFLAGTDTNL 1072
Query: 1053 RRLTELIVFILNHVTSAADAEFFDLSLRRHGQSLEKVNRGMILAPLVGIILNLLDASAES 1112
RRLTELI+FILNH+TSA D EFFDLSLRR GQ EKV+RG++LAPLVGIILNLL+AS +S
Sbjct: 1073 RRLTELILFILNHMTSAVDDEFFDLSLRRQGQPSEKVSRGILLAPLVGIILNLLEASEDS 1132
Query: 1113 ECGVQNDVVGVFSSMDCPDTIHCGFQYLLEYNWAGSFRG-DTYLSKLGQLECFLSLVLCH 1171
+ Q+DV+G+F+SMDCPDT++ GFQYLLEYNW G G D Y+ KLGQLE FLS ++
Sbjct: 1133 KPKQQHDVIGLFASMDCPDTVYYGFQYLLEYNWDGCVSGDDAYVKKLGQLENFLSHLINR 1192
Query: 1172 IEAQEMERTR---CGRETDADDGMCCICYASEADAQFVPCSHRSCHGCISRHLLNCLRCF 1228
+QE ER TD +D CCICYA EA+A PCSHRSC+GCI+RHLLNC RCF
Sbjct: 1193 ASSQEPERKEESFNKDTTDIEDNTCCICYAGEANAMIAPCSHRSCYGCITRHLLNCQRCF 1252
Query: 1229 FCNATVLEVVK 1239
FCNATV++V++
Sbjct: 1253 FCNATVIDVIR 1263
>sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens GN=RNF123 PE=1
SV=1
Length = 1314
Score = 338 bits (867), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 321/1233 (26%), Positives = 514/1233 (41%), Gaps = 185/1233 (15%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKK 194
F + R+ CV+KGKW+YEV + + G+ Q+GW T+SC F +GVGD +SYA+DG RV+K
Sbjct: 121 FGTIRSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNQEEGVGDTHNSYAYDGNRVRK 180
Query: 195 WNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL 254
WN YG++W AGDI+ C IDLD +SF NGVSLG AF + + G G Y+PA+SL
Sbjct: 181 WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSR-GLGMAYFPAISL 239
Query: 255 SQGERCVLNFGARPFKYPINCYLPLQESPPVN-VFATQLLQCLSRLLG--MDKAERSSVE 311
S E NFG+RP +YP+ Y PLQ+ P + V A +LL C +L +D E ++
Sbjct: 240 SFKESVAFNFGSRPLRYPVAGYRPLQDPPSADLVRAQRLLGCFRAVLSVELDPVEGRLLD 299
Query: 312 KSRRLKRFVSLEKIFNPVSHGICEEFFSLLEADARIIEYVGWGILLSFMMEVFGLQVPHD 371
K R + ++H I F LL Y+ +L+SF++ + P
Sbjct: 300 KESSKWRLRGQPTVLLTLAH-IFHHFAPLLRK-----VYLVEAVLMSFLLGIVEKGTPTQ 353
Query: 372 YSS-LDRVVDVFLQFQGSRSIFEHIIQALSCGCKTASMVLTECPYSGSYPYLALACHILR 430
S + +V+D+ F + + + Q + + YL L ILR
Sbjct: 354 AQSVVHQVLDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTIAILR 413
Query: 431 REELMVLWWNSLDFEFIFE-GFLSRKNPNRQD---LQCMIPSVWWPGSCEDISYESSMML 486
E+ +++ F+ + F K+P R + LQ +IP+ WWP ES+ M
Sbjct: 414 HEKSRKFLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHCSSREGKESTEMK 473
Query: 487 TTTALSEAVSKIEEKHRELCLLVIQFIPPISPPQFPGSVFRTFIQNILLKNRGADRSLPP 546
TA + E+ + I+ + + I +LL N+ +
Sbjct: 474 EETAEERLRRRAYERGCQRLRKRIEVV----------EELQVQILKLLLDNKDDNG---- 519
Query: 547 PGVSSNSVLVSLYTVILHFLSEGFAIGDTCSWLKRSEKNGCNVGFLHR------------ 594
G +S + ++ + FL E + L E C FLHR
Sbjct: 520 -GEASRYIFLTKFR---KFLQENASGRGNMPMLCPPEYMVC---FLHRLISALRYYWDEY 572
Query: 595 ---GGQQSF------PIGLFLKNDLLRADISRLGGSFSHLLKSHPVD-DQDAEVI----R 640
SF P +F + D+ RLGG SHL K+ D A ++
Sbjct: 573 KASNPHASFSEEAYIPPQVFYNGKVDYFDLQRLGGLLSHLRKTLKDDLASKANIVIDPLE 632
Query: 641 WEEGYMD--DEETRVCHLSEHKPCCCSSYDAEFVRSLKYPVRNATKGSRGHCSS------ 692
+ MD DE+ +P + + + T G S
Sbjct: 633 LQSTAMDDLDEDEEPAPAMAQRPMQALAVGGPLPLPRPGWLSSPTLGRANRFLSTAAVSL 692
Query: 693 -VPER--SAHVAAECSTGSLNDEIADKPSTSDQSESDFGYHPVRHTMTVLRESNMSAATL 749
P R S + T S+ + S +E P L E+++
Sbjct: 693 MTPRRPLSTSEKVKVRTLSVEQRTREDIEGSHWNEGLLLGRPPEEPEQPLTENSLL---- 748
Query: 750 KEEELLDALLLLYHIGLAPNFKQASYYMSHQSQSISLLEETDKQIRE--RACSEQLKRLK 807
E+LD +++Y++ + + ++ L +T+ ++R + + L L
Sbjct: 749 ---EVLDGAVMMYNLSVHQQLGKMVGVSDDVNEYAMALRDTEDKLRRCPKRRKDILAELT 805
Query: 808 EARNNYREEVIDCVRHCAWYRISLFSRWKQRGMYATCVWVVQLLLVL----SKVDSVFIY 863
+++ + E++ R AW +++S+ K +Y W++++ L + S+F +
Sbjct: 806 KSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIY----WLLRVCLRTIEHGDRTGSLFAF 861
Query: 864 IPEFYLEA------------------------------LVTFVVTHFNDPRISSADLRDL 893
+PEFYL L + HF D RI D+RD
Sbjct: 862 MPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFADARIVGTDIRDS 921
Query: 894 LLQSISVLVQYKDYLAAFES-NEAATLRLPKALISAFDNRSWIPVTNILLRLCKGHGFG- 951
L+Q+++ V Y L A E E + + + L++ ++ R W IL+RL +G GFG
Sbjct: 922 LMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRPWAQTNWILVRLWRGCGFGY 981
Query: 952 ---------SSKHGESSSSSV-------IFQRLLREACINDEGLFSTFLNRLFNTLSWTM 995
+K +++ S+ + Q+ + + + +FLN + N L+W
Sbjct: 982 RYTRLPHLLKTKLEDANLPSLQKPCPSTLLQQHMADLLQQGPDVAPSFLNSVLNQLNWAF 1041
Query: 996 TEFSISIREMQ------EKYQVSEFQQKKCCVIFDLSCNLTRVLEFCTHEIPQAFLSGTD 1049
+EF I+E+Q E+ V Q K C FDLS +L RVLE +P+ FL T
Sbjct: 1042 SEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWTR 1101
Query: 1050 TN----LRRLTELIVFILNHVTSAADAEFFDLSLRRHGQSLEKVNRGMILAPLVGIILNL 1105
LRRL +L+ +LN VT A+ FD + LE V+ IL + GI++ L
Sbjct: 1102 PTSEMLLRRLAQLLNQVLNRVT--AERNLFDRVVTLRLPGLESVDHYPILVAVTGILVQL 1159
Query: 1106 LDASAESE-------------------CGV--QNDVVGVFSSMDCPDTIHCGFQYLLEYN 1144
L SE C + Q + +++ PD Q +Y
Sbjct: 1160 LVRGPASEREQATSVLLADPCFQLRSICYLLGQPEPPAPGTALPAPDRKRFSLQSYADYI 1219
Query: 1145 WAGSFRGDTYLSKLGQLECFLSLVLCHIEAQEMERTRCGRETDADDGMCCICYASEADAQ 1204
A +L Q+E L+ H+ + + T +D +C ICYA A
Sbjct: 1220 SA---------DELAQVEQMLA----HLTSASAQAAAASLPTSEED-LCPICYAHPISAV 1265
Query: 1205 FVPCSHRSCHGCISRHLLNCLRCFFCNATVLEV 1237
F PC H+SC CI++HL+N CFFC T++ V
Sbjct: 1266 FQPCGHKSCKACINQHLMNNKDCFFCKTTIVSV 1298
>sp|Q5XPI3|RN123_MOUSE E3 ubiquitin-protein ligase RNF123 OS=Mus musculus GN=Rnf123 PE=2
SV=1
Length = 1314
Score = 335 bits (858), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 317/1239 (25%), Positives = 519/1239 (41%), Gaps = 187/1239 (15%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKK 194
F + R+ CV+KGKW+YEV + + G+ Q+GW T++C F +GVGD +SYA+DG RV+K
Sbjct: 121 FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRK 180
Query: 195 WNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL 254
WN YG++W AGDI+ C IDLD +SF NGVSLG AF + + G G Y+PA+SL
Sbjct: 181 WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSR-GLGMAYFPAISL 239
Query: 255 SQGERCVLNFGARPFKYPINCYLPLQESPPVN-VFATQLLQCLSRLLG--MDKAERSSVE 311
S E NFG+RP +YP+ + PLQ+ P + V A +LL C +L +D E VE
Sbjct: 240 SFKESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQRLLGCFQAVLSVELDPVEGRLVE 299
Query: 312 KSRRLKRFVSLEKIFNPVSHGICEEFFSLLEADARIIEYVGWGILLSFMMEVFGLQVPHD 371
+ + ++H I F LL Y+ +L+SF++ V P
Sbjct: 300 TESSEWQLQGQPTVLLTLAH-IFHHFAPLLRK-----VYLVEAVLMSFLLGVVEKGTPEQ 353
Query: 372 YSS-LDRVVDVFLQFQGSRSIFEHIIQALSCGCKTASMVLTECPYSGSYPYLALACHILR 430
S + +++D+ F + + + Q + + YL L ILR
Sbjct: 354 AQSVVHQILDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTMSILR 413
Query: 431 REELMVLWWNSLDFEFIFE-GFLSRKNPNRQD---LQCMIPSVWWPGSCEDISYESSMML 486
E+ +++ F+ + F K+P R + L+ +IP+ WWP S +
Sbjct: 414 HEKSRKFLLSNVLFDMLRSVVFFYIKSPLRVEEAGLKELIPTTWWPHRSSRESRDGKEAR 473
Query: 487 TTTALSEAVSKIEEKHRELCLLVIQFIPPISPPQFPGSVFRTFIQNILLKNRGADRSLPP 546
T + E+ + I+ + + + I +LL N+ +
Sbjct: 474 EETTEERQRRRAYERGCQRLKKRIEVVEEL----------QVQILKLLLDNKDDNG---- 519
Query: 547 PGVSSNSVLVSLYTVILHFLSEGFAIGDTCSWLKRSEKNGCNVGFLHR------------ 594
G +S + ++ + FL E + L E C FLHR
Sbjct: 520 -GEASRYIFLTKFR---KFLQENASGRGNTPVLCPPEYMVC---FLHRLVSALRFYWDEY 572
Query: 595 ---GGQQSF------PIGLFLKNDLLRADISRLGGSFSHLLKSHPVD-DQDAEVI----R 640
+ SF P +F + D+ RLGG SHL K+ D A ++
Sbjct: 573 KASNPRASFSEEAYIPPQIFYNGKVDYFDLQRLGGLLSHLRKTLKDDLASKANIVIDPLE 632
Query: 641 WEEGYMD--DEETRVCHLSEHKPCCCSSYDAEFVRSLKYPVRNATKGSRGHCSS------ 692
+ MD DE+ + +P + + + T G S
Sbjct: 633 LQAATMDDLDEDEEPAPSAAQRPMQALAIGGALPLPRPGWLSSPTLGRANRFLSTAAVSL 692
Query: 693 -VPERSAHVAAECSTGSLNDEIADKPSTSDQSESDFGYHPVRHTMTVLRESNMSAATLKE 751
P R + SLN E ++ D + + R L E
Sbjct: 693 MTPRRLLSTMEKVKVRSLNVE--------QRTREDIEGSHWNEGLLLGRPPEEPEQPLTE 744
Query: 752 EELLDAL---LLLYHIGLAPNFKQASYYMSHQSQSISLLEETDKQIRE--RACSEQLKRL 806
LL+ L +++Y++ + + ++ L +T+ ++R + + L L
Sbjct: 745 NSLLEVLDGTVMMYNLSVHQQLGKMVGVSDDVNEYAMALRDTEDKLRRCPKRRKDILAEL 804
Query: 807 KEARNNYREEVIDCVRHCAWYRISLFSRWKQRGMYATCVWVVQLLLVL----SKVDSVFI 862
+++ + E++ R AW +++S+ K +Y W++++ L + S+F
Sbjct: 805 TKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIY----WLLRVCLRTIEHGDRTGSLFA 860
Query: 863 YIPEFYLEA------------------------------LVTFVVTHFNDPRISSADLRD 892
++PEFYL L + HF DPRI D+RD
Sbjct: 861 FMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFADPRIVGTDIRD 920
Query: 893 LLLQSISVLVQYKDYLAAFES-NEAATLRLPKALISAFDNRSWIPVTNILLRLCKGHGFG 951
L+Q+++ V Y L A E E + + + L++ ++ R W IL+RL +G GFG
Sbjct: 921 SLMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRPWAQTNWILVRLWRGCGFG 980
Query: 952 ----------SSKHGESSSSSV-------IFQRLLREACINDEGLFSTFLNRLFNTLSWT 994
+K +++ S+ + Q+ + + + +FLN + N L+W
Sbjct: 981 YRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLRQGSDVAPSFLNSVLNQLNWA 1040
Query: 995 MTEFSISIREMQ------EKYQVSEFQQKKCCVIFDLSCNLTRVLEFCTHEIPQAFLS-- 1046
+EF I+E+Q E+ V Q K C FDLS +L RVLE +P+ FL
Sbjct: 1041 FSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWS 1100
Query: 1047 --GTDTNLRRLTELIVFILNHVTSAADAEFFDLSLRRHGQSLEKVNRGMILAPLVGIILN 1104
++ LRRL +L+ +LN VT A+ FD + LE V+ IL + GI++
Sbjct: 1101 RPTSEMLLRRLAQLLNQVLNRVT--AERNLFDRVVTLRLPGLESVDHYPILVAVTGILVR 1158
Query: 1105 LL--DASAESECGV-------------------QNDVVGVFSSMDCPDTIHCGFQYLLEY 1143
LL ++E+E Q + + +++ PD Q +Y
Sbjct: 1159 LLVHGPTSETEQATSVLLADPCFQLRSICYLLGQPEPLAPGTTLPAPDRKRFSLQSYTDY 1218
Query: 1144 NWAGSFRGDTYLSKLGQLECFLSLVLCHIEAQEMERTRCGRETDADDGMCCICYASEADA 1203
A +L Q+E L+ H+ A + T+ +D +C ICYA A
Sbjct: 1219 ISA---------EELAQVEQMLA----HLTAASAQAAAASLPTNEED-LCPICYAHPISA 1264
Query: 1204 QFVPCSHRSCHGCISRHLLNCLRCFFCNATVLEVVKVDE 1242
F PC H+SC CI++HL+N CFFC AT++ V D+
Sbjct: 1265 VFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDK 1303
>sp|D3ZXK7|RN123_RAT E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus GN=Rnf123
PE=1 SV=1
Length = 1318
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 180/346 (52%), Gaps = 15/346 (4%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKK 194
F + R++ CV+KGKW+YEV + + G+ Q+GW T++C F +GVGD +SYA+DG RV+K
Sbjct: 119 FGTIRSSTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRK 178
Query: 195 WNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL 254
WN YG++W AGDI+ C IDLD +SF NGVSLG AF + + G G Y+PA+SL
Sbjct: 179 WNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSR-GLGMAYFPAISL 237
Query: 255 SQGERCVLNFGARPFKYPINCYLPLQESPPVN-VFATQLLQCLSRLLG--MDKAERSSVE 311
S E NFG+RP +YP+ + PLQ+ P + V A +LL C +L +D E VE
Sbjct: 238 SFKESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQRLLGCFQTVLSVELDPVEGRLVE 297
Query: 312 KSRRLKRFVSLEKIFNPVSHGICEEFFSLLEADARIIEYVGWGILLSFMMEVFGLQVPHD 371
K + + ++H I F LL Y+ +L+SF++ + P
Sbjct: 298 KESSEWQLHGQPTVLLTLAH-IFHHFAPLLRK-----VYLVEAVLMSFLLGIVEKGTPEQ 351
Query: 372 YSS-LDRVVDVFLQFQGSRSIFEHIIQALSCGCKTASMVLTECPYSGSYPYLALACHILR 430
S + +++D+ F + + + Q + + YL L +LR
Sbjct: 352 AQSVVHQILDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTMAVLR 411
Query: 431 REELMVLWWNSLDFEFIFE-GFLSRKNPNRQD---LQCMIPSVWWP 472
E+ +++ F+ + F K+P R + L+ +IP+ WWP
Sbjct: 412 HEKSRKFLLSNVLFDMLRSVVFFYIKSPLRVEEAGLKELIPTTWWP 457
Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 248/571 (43%), Gaps = 97/571 (16%)
Query: 753 ELLDALLLLYHIGLAPNFKQASYYMSHQSQSISLLEETDKQIRE--RACSEQLKRLKEAR 810
E+LD +++Y + + + ++ L +T+ ++R + + L L +++
Sbjct: 753 EVLDGTVMMYSLSVHQQLGKMVGVSDDVNEYAMALRDTEDKLRRCPKRRKDILAELTKSQ 812
Query: 811 NNYREEVIDCVRHCAWYRISLFSRWKQRGMYATCVWVVQLLLVLSKVDSVFIYIPEFYLE 870
+ E++ R AW +++S+ K +Y +Q + + S+F ++PEFYL
Sbjct: 813 KVFSEKLDHLSRRLAWVHATVYSQEKMLDIYWLLRVCLQTIEHGDRTGSLFAFMPEFYLS 872
Query: 871 A------------------------------LVTFVVTHFNDPRISSADLRDLLLQSISV 900
L + HF DPRI D+RD L+Q+++
Sbjct: 873 VAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFADPRIVGTDIRDSLMQALAS 932
Query: 901 LVQYKDYLAAFES-NEAATLRLPKALISAFDNRSWIPVTNILLRLCKGHGFG-------- 951
V Y L A E E + + + L++ ++ R W IL+RL +G GFG
Sbjct: 933 YVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRPWAQTNWILVRLWRGCGFGYRYTRLPH 992
Query: 952 --SSKHGESSSSSV-------IFQRLLREACINDEGLFSTFLNRLFNTLSWTMTEFSISI 1002
+K +++ S+ + Q+ + + + +FLN + N L+W +EF I
Sbjct: 993 LLKTKPEDANLPSLQKPCPSTLLQQHMADLLRQGSDVAPSFLNSVLNQLNWAFSEFIGMI 1052
Query: 1003 REMQ------EKYQVSEFQQKKCCVIFDLSCNLTRVLEFCTHEIPQAFLS----GTDTNL 1052
+E+Q E+ V Q K C FDLS +L RVLE +P+ FL ++ L
Sbjct: 1053 QEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWSRPTSEMLL 1112
Query: 1053 RRLTELIVFILNHVTSAADAEFFDLSLRRHGQSLEKVNRGMILAPLVGIILNLL--DASA 1110
RRL +L+ +LN VT A+ FD + LE V+ IL + GI++ LL S+
Sbjct: 1113 RRLAQLLNQVLNRVT--AERNLFDRVVTLRLPGLESVDHYPILVAVTGILVRLLAHGPSS 1170
Query: 1111 ESECGV-------------------QNDVVGVFSSMDCPDTIHCGFQYLLEYNWAGSFRG 1151
E+E Q + + S++ PD Q +Y A
Sbjct: 1171 ETEQATSVLLADPCFQLRSIRYLLGQPEPLAPGSALPAPDRKRFSLQSYADYISA----- 1225
Query: 1152 DTYLSKLGQLECFLSLVLCHIEAQEMERTRCGRETDADDGMCCICYASEADAQFVPCSHR 1211
+L Q+E +L H+ A + T+ +D +C ICYA A F PC H+
Sbjct: 1226 ----EELAQVE----RMLAHLTAASAQAAAASLPTNEED-LCPICYAHPISAVFQPCGHK 1276
Query: 1212 SCHGCISRHLLNCLRCFFCNATVLEVVKVDE 1242
SC CI++HL+N CFFC AT++ V D+
Sbjct: 1277 SCKACINQHLMNNKDCFFCKATIVSVEDWDK 1307
>sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing protein 1 OS=Mus musculus
GN=Rspry1 PE=2 SV=1
Length = 576
Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSY--AFDGRRV 192
F S R CV G W YEVT+ TSGV Q+GWAT F +H+G G DD Y A+DG R
Sbjct: 347 FESVRCTFCVDTGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYSCAYDGCRQ 406
Query: 193 KKW-NKEAEPYGQS-WVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYP 250
W N ++P+ W GD +G +DL+ ++ F+ NG L GF +
Sbjct: 407 LIWYNARSKPHVHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSSTVSGF--FA 464
Query: 251 AVSLSQGERCVLNFGARPFKYP 272
A S ++C NFGARPFKYP
Sbjct: 465 AASFMSYQQCEFNFGARPFKYP 486
>sp|Q5R881|RSPRY_PONAB RING finger and SPRY domain-containing protein 1 OS=Pongo abelii
GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSY--AFDGRRV 192
F S R CV G W YEVT+ TSGV Q+GWAT F +H+G G DD Y A+DG R
Sbjct: 347 FESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYSCAYDGCRQ 406
Query: 193 KKW-NKEAEPYGQS-WVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYP 250
W N ++P+ W GD +G +DL+ ++ F+ NG L GF +
Sbjct: 407 LIWYNARSKPHIHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSSTVSGF--FA 464
Query: 251 AVSLSQGERCVLNFGARPFKYP 272
A S ++C NFGA+PFKYP
Sbjct: 465 AASFMSYQQCEFNFGAKPFKYP 486
>sp|Q96DX4|RSPRY_HUMAN RING finger and SPRY domain-containing protein 1 OS=Homo sapiens
GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSY--AFDGRRV 192
F S R CV G W YEVT+ TSGV Q+GWAT F +H+G G DD Y A+DG R
Sbjct: 347 FESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYSCAYDGCRQ 406
Query: 193 KKW-NKEAEPYGQS-WVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYP 250
W N ++P+ W GD +G +DL+ ++ F+ NG L GF +
Sbjct: 407 LIWYNARSKPHIHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSSTVSGF--FA 464
Query: 251 AVSLSQGERCVLNFGARPFKYP 272
A S ++C NFGA+PFKYP
Sbjct: 465 AASFMSYQQCEFNFGAKPFKYP 486
>sp|Q95LP3|RSPRY_MACFA RING finger and SPRY domain-containing protein 1 OS=Macaca
fascicularis GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 135 FSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSY--AFDGRRV 192
F S R CV G W YEVT+ TSGV Q+GWAT F +H+G G DD Y A+DG R
Sbjct: 347 FESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYSCAYDGCRQ 406
Query: 193 KKW-NKEAEPYGQS-WVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYP 250
W N ++P+ W GD +G +DL+ ++ F+ NG L GF +
Sbjct: 407 LIWYNARSKPHIHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSSTISGF--FA 464
Query: 251 AVSLSQGERCVLNFGARPFKYP 272
A S ++C NFGA+PFKYP
Sbjct: 465 AASFMSYQQCEFNFGAKPFKYP 486
>sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus GN=Ryr1 PE=1 SV=1
Length = 5035
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A + V G+W +E T+G ++GWA +G D +Y F+G R ++W+
Sbjct: 1078 AEKSYAVQSGRWYFEFEAVTTGEMRVGWARPE--LRPDVELGADDLAYVFNGHRGQRWHL 1135
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNG---VSLGVAFSGIRKMGPGFGYYPAVSL 254
+EP+G+ W +GD++GC IDL + I F NG +S + + R + G G+ P SL
Sbjct: 1136 GSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFRDIEIGDGFLPVCSL 1195
Query: 255 SQGERCVLNFG 265
G+ LN G
Sbjct: 1196 GPGQVGHLNLG 1206
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 138 ARANVCVWKGKWMYEVTLE------TSGVQQL--GWATLSCPFTDHKGVGDA-------D 182
RA GKW +EV ++ T+ L GWA LS ++ + G G+ D
Sbjct: 652 GRAEGSTQYGKWYFEVMVDEVAPFLTAQATHLRVGWA-LSEGYSPYPGGGEGWGGNGVGD 710
Query: 183 D--SYAFDGRRVKKWNKE-AEPY---GQSWVAG-DIIGCCIDLDSDEISFYRNGVSLGVA 235
D SY FDG + W A P GQ +A D++ CC+DL ISF NG +
Sbjct: 711 DLYSYGFDGLHL--WTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQGV 768
Query: 236 FSGIRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
F G ++P VS S G + G R FK+ P Y P E+
Sbjct: 769 FESFNLDGL---FFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAPCHEA 815
>sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3
Length = 5038
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 111 LEESSICGDVRIAKLPLLVESLAMFSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSC 170
+E S C VRI + A + V G+W +E T+G ++GWA
Sbjct: 1062 VENQSRCDRVRIFR-------------AEKSYTVQSGRWYFEFEAVTTGEMRVGWARPE- 1107
Query: 171 PFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNG- 229
+G + +Y F+G R ++W+ +EP+G+ W GD++GC IDL + I F NG
Sbjct: 1108 -LRPDVELGADELAYVFNGHRGQRWHLGSEPFGRPWQPGDVVGCMIDLTENTIIFTLNGE 1166
Query: 230 --VSLGVAFSGIRKMGPGFGYYPAVSLSQGERCVLNFG 265
+S + + R++ G G+ P SL G+ LN G
Sbjct: 1167 VLMSDSGSETAFREIEIGDGFLPVCSLGPGQVGHLNLG 1204
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 138 ARANVCVWKGKWMYEVTLE------TSGVQQL--GWATLSCPFTDHKGVGDA-------D 182
RA KW +EV ++ T+ L GWA L+ +T + G G+ D
Sbjct: 650 GRAEGTTQYSKWYFEVMVDEVTPFLTAQATHLRVGWA-LTEGYTPYPGAGEGWGGNGVGD 708
Query: 183 D--SYAFDGRRVKKWNKE-AEPY---GQSWVAG-DIIGCCIDLDSDEISFYRNGVSLGVA 235
D SY FDG + W A P GQ +A D+I CC+DL ISF NG +
Sbjct: 709 DLYSYGFDGLHL--WTGHVARPVTSPGQHLLAPEDVISCCLDLSVPSISFRINGCPVQGV 766
Query: 236 FSGIRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
F G ++P VS S G + G R FK+ P Y P E+
Sbjct: 767 FESFNLDGL---FFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEA 813
>sp|F1LMY4|RYR1_RAT Ryanodine receptor 1 OS=Rattus norvegicus GN=Ryr1 PE=2 SV=1
Length = 5035
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A + V G+W +E T+G ++LGWA +G D +Y F+G R ++W+
Sbjct: 1078 AEKSYAVQSGRWYFEFEAVTTG-RELGWARPE--LRPDVELGADDLAYVFNGHRGQRWHL 1134
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNG---VSLGVAFSGIRKMGPGFGYYPAVSL 254
+EP+G+ W +GD++GC IDL + I F NG +S + + R++ G G+ P SL
Sbjct: 1135 GSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLPVCSL 1194
Query: 255 SQGERCVLNFG 265
G+ LN G
Sbjct: 1195 GPGQVGHLNLG 1205
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 138 ARANVCVWKGKWMYEVTLE------TSGVQQL--GWATLSCPFTDHKGVGDA-------D 182
RA GKW +EV ++ T+ L GWA LS ++ + G G+ D
Sbjct: 652 GRAEGSTQYGKWYFEVMVDEVAPFLTAQATHLRVGWA-LSEGYSPYPGGGEGWGGNGVGD 710
Query: 183 D--SYAFDGRRVKKWNKE-AEPY---GQSWVAG-DIIGCCIDLDSDEISFYRNGVSLGVA 235
D SY FDG + W A P GQ + D++ CC+DL ISF NG +
Sbjct: 711 DLYSYGFDGLHL--WTGHVARPVTSPGQHLLGPEDVVSCCLDLSVPSISFRINGCPVQGV 768
Query: 236 FSGIRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
F G ++P VS S G + G R FK+ P Y P E+
Sbjct: 769 FESFNLDGL---FFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAPCHEA 815
>sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculus GN=RYR2 PE=1 SV=3
Length = 4969
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A V G+W +E TSG ++GW+ C + +G + ++AFDG + ++W++
Sbjct: 1090 AEKTYAVKAGRWYFEFEAVTSGDMRVGWSRPGC--QPDQELGSDERAFAFDGFKAQRWHQ 1147
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSG----IRKMGPGFGYYPAVS 253
E YG+SW AGD++GC +D++ + F NG L + SG + G G+ P S
Sbjct: 1148 GNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEIL-LDDSGSELAFKDFDVGDGFIPVCS 1206
Query: 254 LSQGERCVLNFG 265
L + +NFG
Sbjct: 1207 LGVAQVGRMNFG 1218
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 148 KWMYE---------VTLETSGVQQLGWATLS--CPF----TDHKGVGDADD--SYAFDGR 190
KW YE VT E + ++ +GWA+ P+ + G G DD SY FDG
Sbjct: 672 KWYYELMVDHTEPFVTAEATHLR-VGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGL 730
Query: 191 RVKKWN-----KEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPG 245
+ W+ + P D+I CC+DL + ISF NG + F G
Sbjct: 731 HL--WSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFNIDGL- 787
Query: 246 FGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
++P VS S G + G R FK+ P Y P E+
Sbjct: 788 --FFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAPCYEA 825
>sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus GN=RYR1 PE=1 SV=1
Length = 5037
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A + V G+W +E T+G ++GWA +G + +Y F+G R ++W+
Sbjct: 1077 AEKSYTVQSGRWYFEFEAVTTGEMRVGWARPE--LRPDVELGADELAYVFNGHRGQRWHL 1134
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNG---VSLGVAFSGIRKMGPGFGYYPAVSL 254
+EP+G+ W +GD++GC IDL + I F NG +S + + R++ G G+ P SL
Sbjct: 1135 GSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLPVCSL 1194
Query: 255 SQGERCVLNFG 265
G+ LN G
Sbjct: 1195 GPGQVGHLNLG 1205
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 69/169 (40%), Gaps = 29/169 (17%)
Query: 138 ARANVCVWKGKWMYEVTLE------TSGVQQL--GWATLS--CPF----TDHKGVGDADD 183
RA GKW +EV ++ T+ L GWA P+ G G DD
Sbjct: 651 GRAEGSTQYGKWYFEVMVDEVVPFLTAQATHLRVGWALTEGYSPYPGGGEGWGGNGVGDD 710
Query: 184 --SYAFDGRRVKKWNKE-AEPY---GQSWVAG-DIIGCCIDLDSDEISFYRNGVSLGVAF 236
SY FDG + W A P GQ +A D++ CC+DL ISF NG + F
Sbjct: 711 LYSYGFDGLHL--WTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQGVF 768
Query: 237 SGIRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
G ++P VS S G + G R FK+ P Y P E+
Sbjct: 769 EAFNLDGL---FFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEA 814
>sp|Q24498|RY44_DROME Ryanodine receptor 44F OS=Drosophila melanogaster GN=Rya-r44F PE=1
SV=3
Length = 5127
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 141 NVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKG--VGDADDSYAFDGRRVKKWNKE 198
N V GKW +E + TSG ++GWA C + G +G D S+AFDG V K +
Sbjct: 1086 NYAVTSGKWYFEFEVLTSGPMRVGWARADC----YPGAMLGSEDTSWAFDGHNVTKMHAG 1141
Query: 199 A-EPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKM----GPGFGYYPAVS 253
+ E +G + AGD+IGC ID+ ISF NG L A G G G+ PA +
Sbjct: 1142 SIEHFGVRYEAGDVIGCFIDVKEQTISFSLNGELLMDALGGETTFADVTAEGVGFVPACT 1201
Query: 254 LSQGERCVLNFG 265
L G++ L +G
Sbjct: 1202 LGVGQKARLIYG 1213
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 45/222 (20%)
Query: 113 ESSICGDVRIAKLPLLVESLAM--FSSARANVCVWK-------GKWMYEVTL----ETSG 159
+++IC D + LL+++L + +S R N+ V + KW +EVT+ +T+
Sbjct: 622 QNNIC-DFLLPGKNLLLQTLLVDHVASIRPNIFVGRVDGSSMYQKWYFEVTMDHIEQTTH 680
Query: 160 VQ---QLGWATLS--CPF----TDHKGVGDADD--SYAFDGRRV-----KKWNKEAEPYG 203
+ ++GWA S P+ G G DD S+ FDG + K +A P
Sbjct: 681 MMPHLRIGWANTSGYVPYPGGGKKWGGNGVGDDLYSFGFDGAFLWTGGRKTLVVDALPEE 740
Query: 204 QSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGERCVLN 263
GD+IG IDL I+F NGV + +F G ++P +S S C
Sbjct: 741 PFIRKGDVIGVAIDLSVPIITFTFNGVKVRGSFRDFNLDG---MFFPVMSCSSKLSCRFL 797
Query: 264 FGARPFKYPINCYLPLQESPPVNVFATQLLQCL--SRLLGMD 303
FG + L+ +PP+ A L+QCL ++L +D
Sbjct: 798 FGGDHGR--------LKFAPPMGFSA--LVQCLMPQQILSLD 829
>sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus GN=Ryr2 PE=1 SV=1
Length = 4966
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A V G+W +E T+G ++GW+ C +G D ++AFDG + ++W++
Sbjct: 1090 AEKTYAVKAGRWYFEFEAVTAGDMRVGWSRPGC--QPDLELGSDDRAFAFDGFKAQRWHQ 1147
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSG----IRKMGPGFGYYPAVS 253
E YG+SW AGD++GC +D++ + F NG L + SG + G G+ P S
Sbjct: 1148 GNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEIL-LDDSGSELAFKDFDVGDGFIPVCS 1206
Query: 254 LSQGERCVLNFG 265
L + +NFG
Sbjct: 1207 LGVAQVGRMNFG 1218
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Query: 148 KWMYE---------VTLETSGVQQLGWATLS--CPF----TDHKGVGDADD--SYAFDGR 190
KW YE VT E + ++ +GWA+ P+ + G G DD SY FDG
Sbjct: 672 KWYYELMVDHTEPFVTAEATHLR-VGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGL 730
Query: 191 RVKKWN-----KEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPG 245
+ W+ + P D+I CC+DL + ISF NG + F G
Sbjct: 731 HL--WSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFNIDGL- 787
Query: 246 FGYYPAVSLSQGERCVLNFGAR 267
++P VS S G + G R
Sbjct: 788 --FFPVVSFSAGIKVRFLLGGR 807
>sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR2 PE=1 SV=3
Length = 4967
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A V G+W +E T+G ++GW+ C + +G + ++AFDG + ++W++
Sbjct: 1090 AEKTYAVKAGRWYFEFETVTAGDMRVGWSRPGC--QPDQELGSDERAFAFDGFKAQRWHQ 1147
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSG----IRKMGPGFGYYPAVS 253
E YG+SW AGD++GC +D++ + F NG L + SG + G G+ P S
Sbjct: 1148 GNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEIL-LDDSGSELAFKDFDVGDGFIPVCS 1206
Query: 254 LSQGERCVLNFG 265
L + +NFG
Sbjct: 1207 LGVAQVGRMNFG 1218
Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 148 KWMYE---------VTLETSGVQQLGWATLS--CPF----TDHKGVGDADD--SYAFDGR 190
KW YE VT E + ++ +GWA+ P+ + G G DD SY FDG
Sbjct: 672 KWYYELMVDHTEPFVTAEATHLR-VGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGL 730
Query: 191 RVKKWN-----KEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPG 245
+ W+ + P D+I CC+DL + ISF NG + F G
Sbjct: 731 HL--WSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFNIDGL- 787
Query: 246 FGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
++P VS S G + G R FK+ P Y P E+
Sbjct: 788 --FFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAPCYEA 825
>sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus GN=Ryr2 PE=1 SV=2
Length = 4953
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A V G+W +E T+G ++GW+ C +G + ++AFDG + ++W++
Sbjct: 1083 AEKTYAVKAGRWYFEFEAVTAGDMRVGWSRPGC--QPDLELGSDERAFAFDGFKAQRWHQ 1140
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSG----IRKMGPGFGYYPAVS 253
E YG+SW AGD++GC +D++ + F NG L + SG + G G+ P S
Sbjct: 1141 GNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEIL-LDDSGSELAFKDFDVGDGFIPVCS 1199
Query: 254 LSQGERCVLNFG 265
L + +NFG
Sbjct: 1200 LGVAQVGRMNFG 1211
Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Query: 148 KWMYE---------VTLETSGVQQLGWATLS--CPF----TDHKGVGDADD--SYAFDGR 190
KW YE VT E + ++ +GWA+ P+ + G G DD SY FDG
Sbjct: 665 KWYYELMVDHTEPFVTAEATHLR-VGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGL 723
Query: 191 RVKKWN-----KEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPG 245
+ W+ + P D+I CC+DL + ISF NG + F G
Sbjct: 724 HL--WSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFNIDGL- 780
Query: 246 FGYYPAVSLSQGERCVLNFGAR 267
++P VS S G + G R
Sbjct: 781 --FFPVVSFSAGIKVRFLLGGR 800
>sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa GN=RYR1 PE=2 SV=2
Length = 5035
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 138 ARANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNK 197
A + V G+W +E T+G ++GWA +G + +Y F+G R ++W+
Sbjct: 1077 AEKSYAVQSGRWYFEFEAVTTGEMRVGWARPE--LRPDVELGADELAYVFNGHRGQRWHL 1134
Query: 198 EAEPYGQSWVAGDIIGCCIDLDSDEISFYRNG---VSLGVAFSGIRKMGPGFGYYPAVSL 254
+E +G+ W +GD++GC IDL + I F NG +S + + R + G G+ P SL
Sbjct: 1135 GSELFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFRDIEVGDGFLPVCSL 1194
Query: 255 SQGERCVLNFG 265
G+ LN G
Sbjct: 1195 GPGQVGHLNLG 1205
Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 67/169 (39%), Gaps = 29/169 (17%)
Query: 138 ARANVCVWKGKWMYEVTLE------TSGVQQL--GWATLS--CPF----TDHKGVGDADD 183
RA KW +EV ++ T+ L GWA P+ G G DD
Sbjct: 651 GRAEGTTQYSKWYFEVMVDEVVPFLTAQATHLRVGWALTEGYSPYPGGGEGWGGNGVGDD 710
Query: 184 --SYAFDGRRVKKWN----KEAEPYGQSWVAG-DIIGCCIDLDSDEISFYRNGVSLGVAF 236
SY FDG + W + GQ +A D++ CC+DL ISF NG + F
Sbjct: 711 LYSYGFDGLHL--WTGHVPRLVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQGVF 768
Query: 237 SGIRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
G ++P VS S G + G R FK+ P Y P E+
Sbjct: 769 EAFNLNGL---FFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEA 814
>sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus GN=Ryr3 PE=1 SV=1
Length = 4863
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 129 VESLAMFSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSC-PFTDHKGVGDADDSYAF 187
++ + F R+ V GKW +E + T G ++GWA C P + +G D ++ F
Sbjct: 1068 IDKIRFFRVERS-YAVKSGKWYFEFEVVTGGDMRVGWARPGCRPDIE---LGADDQAFVF 1123
Query: 188 DGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSL------GVAFSGIRK 241
+G R ++W++ + +G++W GD++GC I+LD + F NG L +AF+ +
Sbjct: 1124 EGSRGQRWHQGSGYFGRTWQPGDVVGCMINLDDASMVFTLNGELLITNKGSELAFADY-E 1182
Query: 242 MGPGFGYYPAVSLSQGERCVLNFGARPFKYPINCYL 277
+ GF ++ LSQ R L A FK+ C L
Sbjct: 1183 IENGFVPICSLGLSQIGRMNLGTDASTFKFYTMCGL 1218
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 184 SYAFDGRRVKKWN----KEAEPYGQSWV-AGDIIGCCIDLDSDEISFYRNGVSLGVAFSG 238
SY FDG + W+ + Q + + D++ CC+DL ISF NG + F
Sbjct: 711 SYGFDGLHL--WSGRIPRAVASINQHLLKSDDVVSCCLDLGVPSISFRINGQPVQGMFEN 768
Query: 239 IRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
G ++P +S S G + G R FK+ P + Y P E+
Sbjct: 769 FNTDGL---FFPVMSFSAGVKVRFLMGGRHGEFKFLPPSGYAPCYEA 812
>sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3
Length = 4870
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 129 VESLAMFSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSC-PFTDHKGVGDADDSYAF 187
++ + F R+ V GKW +E + T G ++GWA C P + +G D ++ F
Sbjct: 1068 IDKIRFFRVERS-YAVRSGKWYFEFEVVTGGDMRVGWARPGCRPDVE---LGADDQAFVF 1123
Query: 188 DGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSL------GVAFSGIRK 241
+G R ++W++ + +G++W GD++GC I+LD + F NG L +AF+ +
Sbjct: 1124 EGNRGQRWHQGSGYFGRTWQPGDVVGCMINLDDASMIFTLNGELLITNKGSELAFADY-E 1182
Query: 242 MGPGFGYYPAVSLSQGERCVLNFGARPFKYPINCYL 277
+ GF + LSQ R L A FK+ C L
Sbjct: 1183 IENGFVPICCLGLSQIGRMNLGTDASTFKFYTMCGL 1218
Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 184 SYAFDGRRVKKWN----KEAEPYGQSWV-AGDIIGCCIDLDSDEISFYRNGVSLGVAFSG 238
SY FDG + W+ + Q + + D++ CC+DL ISF NG + F
Sbjct: 711 SYGFDGLHL--WSGRIPRAVASINQHLLRSDDVVSCCLDLGVPSISFRINGQPVQGMFEN 768
Query: 239 IRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
G ++P +S S G + G R FK+ P + Y P E+
Sbjct: 769 FNTDGL---FFPVMSFSAGVKVRFLMGGRHGEFKFLPPSGYAPCYEA 812
>sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster GN=Ddx1
PE=2 SV=1
Length = 727
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 146 KGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQS 205
KGK+ +E T+ G+ ++GW+T +G + F G K N++ + YG++
Sbjct: 129 KGKFYFEATVTDEGLCRVGWSTQQANLD----LGTCRMGFGFGGTGKKSNNRQFDDYGEA 184
Query: 206 WVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGERCVLNFG 265
+ D+IGC +DL + E+SF +NG +LGVAF + +YPAV L E NFG
Sbjct: 185 FGKADVIGCLLDLKNQEVSFTKNGQNLGVAFRLPDNLAKET-FYPAVVLKNAE-MQFNFG 242
Query: 266 ARPFKY-PINCYLPLQESPP 284
FKY P N ++ ++ P
Sbjct: 243 KTDFKYAPGNGFVGACQAGP 262
>sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS=Dictyostelium
discoideum GN=ddx1 PE=3 SV=1
Length = 765
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
+A + GK+ YE + G+ ++G+A + +G S+ + G K +
Sbjct: 130 KATKGISSGKFYYESIVRDEGLCRIGFALKKS----SRNIGTDKFSWGYGGTGKKSHESK 185
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
YG+ + D+IGC I+ D + I F +NG G AF+ K G +YPA+ L E
Sbjct: 186 FIDYGKPFGNNDVIGCYINFDEEIIGFTKNGQDFGEAFTFNSKAGI---FYPALVLKNAE 242
Query: 259 RCVLNFGARPFKYPINCYLPLQES 282
NFG++P K+ + Y P+ ++
Sbjct: 243 -MEFNFGSKPMKHDLKGYKPINQA 265
>sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus gallus GN=DDX1 PE=1 SV=1
Length = 740
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
RA V KGK+ YEV+ G+ ++GW+T+ +G + F G K NK+
Sbjct: 123 RATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFS---GIRKMGPGFGYYPAVSLS 255
+ YG+ + D IGC +D+D +I F +NG LG+AF IR + A L
Sbjct: 179 FDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEFPPHIRNQ----ALFAACVLK 234
Query: 256 QGERCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
E NFG FK+ P + Y+ L ++P NV +Q
Sbjct: 235 NAE-LKFNFGEEDFKFPPKDGYIGLCKAPDGNVVKSQ 270
>sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1259.12c PE=4 SV=2
Length = 491
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 149 WMYEVTLETSGVQ-QLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWN--KEAEPYGQS 205
+ YE+ + + G + ++G ++ G +S+ + G +K+N K E YG
Sbjct: 122 YYYEIQILSRGKEGKMGVGFCRKSMQTNRLPGCTAESWGYHGNSGEKFNCSKTGEAYGPE 181
Query: 206 WVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQGERCVLNF 264
+ GDIIGC ++ + I + +NG LGVAF + + YP + L S GE +NF
Sbjct: 182 FTTGDIIGCGVNFINRTIFYTKNGAYLGVAFKKVSDV-----LYPVIGLKSHGEHVEVNF 236
Query: 265 GARPFKYPINCYLPLQES 282
G PF Y I+ + ++++
Sbjct: 237 GQNPFLYDIDYAIQMEKN 254
>sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus laevis GN=ddx1 PE=2 SV=1
Length = 740
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
R+ V KGK+ YEV+ G+ ++GW+TLS +G + F G K NK+
Sbjct: 123 RSTRGVNKGKYYYEVSCHDQGLCRVGWSTLSASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D+ + F +NG LG+AF I ++ + L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDNSIVKFSKNGKDLGLAFQ-IPSHMKNQAFFTSCVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P +V +Q
Sbjct: 238 -LKFNFGEEDFKFPPKDGFVALSKAPDGHVVKSQ 270
>sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca fascicularis GN=DDX1 PE=2
SV=1
Length = 740
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
RA + KGK YEV+ G+ ++GW+T+ +G + F G K NK+
Sbjct: 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D + F +NG LG+AF I +PA L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P + +Q
Sbjct: 238 -LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270
>sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens GN=DDX1 PE=1 SV=2
Length = 740
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
RA + KGK YEV+ G+ ++GW+T+ +G + F G K NK+
Sbjct: 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D + F +NG LG+AF I +PA L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P + +Q
Sbjct: 238 -LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270
>sp|P18160|SPLA_DICDI Dual specificity protein kinase splA OS=Dictyostelium discoideum
GN=splA PE=1 SV=3
Length = 2410
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 121 RIAKLPLLVESLAMFSSARANVCVWKGKWMYEVTLET--SGVQQLGWATLSCPFTDHKGV 178
R A LPL + RA +G +EV ++ G +G A L P H V
Sbjct: 1059 RTAFLPLDSPKDTI-GGVRATQPFGEGFCYFEVIIDQLDKGQLSIGLANLEYPTFYH--V 1115
Query: 179 GDADDSYAF---DGRRVKKWNKE-----AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGV 230
G SY + DGR+ + W +E E YG S+ GDIIGC + S EI F +NG+
Sbjct: 1116 GWMPRSYGYHNDDGRKFR-WREEPGVNEGESYGSSYKKGDIIGCGLSFTSREIFFTKNGM 1174
Query: 231 SLGVAFSGIRKMGPGFGYYPAVSLSQGERCVLNFGARPFKY 271
LG AFS + + +YP+V+ ++ + PFK+
Sbjct: 1175 YLGTAFSNVYGV-----FYPSVAFNEPGISITGVFGPPFKF 1210
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 163 LGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDE 222
G T P + G Y+ DG+ N E YG S+ +GD++GC D S
Sbjct: 902 FGLTTNDHPIEVYPGNYQGSYGYSGDGKCYFGTN-EGRVYGPSFSSGDVVGCGYDSSSKT 960
Query: 223 ISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQGERCVLNFGARPFKY 271
+ F +NGV LGVA + + G YP V L + GE V+NF PF Y
Sbjct: 961 LYFTKNGVYLGVAAQKVNLI----GLYPTVGLQNPGESVVINFFG-PFSY 1005
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 151 YEVTLE---TSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE-AEPYGQSW 206
+EV LE G +G + + PF H +G SY F K E EPYG +
Sbjct: 1578 FEVYLEGHDKKGSITVGLSHSTYPFIKH--IGREPKSYGFSSEGEKYGGSEIGEPYGPFF 1635
Query: 207 V-AGD------IIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQ--G 257
GD +IGC I+ + +I F +NG LGVAFS + YP++S G
Sbjct: 1636 FFDGDSIASSCVIGCGINTSTRDIFFTKNGHYLGVAFSRVTSD----PLYPSISFRGVVG 1691
Query: 258 ERCVLNFGARPFKYPI 273
CV F F++ I
Sbjct: 1692 GLCVATFPGGHFRFNI 1707
>sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo abelii GN=DDX1 PE=2 SV=1
Length = 740
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
RA + KGK YEV+ G+ ++GW+T+ +G + F G K NK+
Sbjct: 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D + F +NG LG+AF I +PA L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P + +Q
Sbjct: 238 -LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270
>sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus GN=Ddx1 PE=2
SV=1
Length = 740
Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
RA + +GK YEV+ G+ ++GW+T+ +G + F G K NK+
Sbjct: 123 RATRGLLRGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D + F +NG LG+AF I +PA L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPAHIKNQALFPACVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P V +Q
Sbjct: 238 -LKFNFGEEEFKFPPKDGFVALSKAPDSYVVKSQ 270
>sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos taurus GN=DDX1 PE=2 SV=1
Length = 740
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
RA + KGK YEV+ G+ ++GW+++ +G + F G K NK+
Sbjct: 123 RATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D + F +NG LG+AF I +PA L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P V +Q
Sbjct: 238 -LKFNFGEEEFKFPPKDGFVALSKAPESFVVKSQ 270
>sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis GN=ddx1 PE=2
SV=1
Length = 740
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
R+ V KGK+ YEV+ G+ ++GW+TL +G + F G K NK+
Sbjct: 123 RSTRGVNKGKYYYEVSCHDQGLCRVGWSTLQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC ID+D+ + + +NG LG+AF I + + L E
Sbjct: 179 FDNYGEEFTMHDTIGCYIDIDNGTVKYSKNGKDLGLAFQ-IPAHLKNQAVFASCVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P +V +Q
Sbjct: 238 -LKFNFGEEDFKFPPKDGFVALSKAPDGHVVKSQ 270
>sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus musculus GN=Ddx1 PE=1 SV=1
Length = 740
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 139 RANVCVWKGKWMYEVTLETSGVQQLGWATLSCPFTDHKGVGDADDSYAFDGRRVKKWNKE 198
R + KGK YEV+ G+ ++GW+T+ +G + F G K NK+
Sbjct: 123 RGTRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGE 258
+ YG+ + D IGC +D+D + F +NG LG+AF I +PA L E
Sbjct: 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPAHIKNQALFPACVLKNAE 237
Query: 259 RCVLNFGARPFKY-PINCYLPLQESPPVNVFATQ 291
NFG FK+ P + ++ L ++P + +Q
Sbjct: 238 -LKFNFGEEEFKFPPKDGFVALSKAPDNYIVKSQ 270
>sp|Q00PI9|HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus
musculus GN=Hnrnpul2 PE=1 SV=2
Length = 745
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 121 RIAKLPLLVESL-AMFSSARANVCVWKGKWMYEVTLETS----------GVQQLGWAT-L 168
R PL E ++S AR+ V KGK +E + + + ++GW+
Sbjct: 261 RYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDF 320
Query: 169 SCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEI--SFY 226
SC +G+ + SY FDGR +K N + E +GQ++ D+IGC + +++E+ SF
Sbjct: 321 SC-----SQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFS 375
Query: 227 RNGVSLGVAF 236
+NG LGVAF
Sbjct: 376 KNGEDLGVAF 385
>sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1
Length = 604
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQG 257
+PYG ++ GD+IGCC++L ++ + +NG SLGVAF+ + YP V L + G
Sbjct: 144 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGVAFTDLPP-----NLYPTVGLQTPG 198
Query: 258 ERCVLNFGARPFKYPINCYL 277
E NFG +PF + I Y+
Sbjct: 199 EIVDANFGQQPFVFDIEDYM 218
>sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo
sapiens GN=HNRNPUL2 PE=1 SV=1
Length = 747
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 121 RIAKLPLLVESL-AMFSSARANVCVWKGKWMYEVTLETS----------GVQQLGWATLS 169
R PL E ++S AR+ V KGK +E + + + ++GW S
Sbjct: 263 RYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGW---S 319
Query: 170 CPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEI--SFYR 227
F+ + +G+ + SY FDGR +K N + E +GQ++ D+IGC + +++E+ SF +
Sbjct: 320 VDFSRPQ-LGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSK 378
Query: 228 NGVSLGVAF 236
NG LGVAF
Sbjct: 379 NGEDLGVAF 387
>sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1
Length = 729
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQG 257
+PYG ++ GD+IGCC++L ++ + +NG SLG+AF+ + YP V L + G
Sbjct: 268 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPP-----NLYPTVGLQTPG 322
Query: 258 ERCVLNFGARPFKYPINCYL 277
E NFG PF + I Y+
Sbjct: 323 EVVDANFGQHPFVFDIEDYM 342
>sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1
Length = 653
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQG 257
+PYG ++ GD+IGCC++L ++ + +NG SLG+AF+ + YP V L + G
Sbjct: 193 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPP-----NLYPTVGLQTPG 247
Query: 258 ERCVLNFGARPFKYPINCYL 277
E NFG PF + I Y+
Sbjct: 248 EVVDANFGQHPFVFDIEDYM 267
>sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1
Length = 597
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQG 257
+PYG ++ GD+IGCC++L ++ + +NG SLG+AF+ + YP V L + G
Sbjct: 150 GQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPP-----NLYPTVGLQTPG 204
Query: 258 ERCVLNFGARPFKYPINCYL 277
E NFG PF + I Y+
Sbjct: 205 EVVDANFGQHPFVFDIEDYM 224
>sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 184 SYAFDGRRVKKW--NKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRK 241
SY + G + + +PYG ++ GD+IGCC++L + + +NG SLG+AF+ +
Sbjct: 106 SYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPP 165
Query: 242 MGPGFGYYPAVSL-SQGERCVLNFGARPFKYPINCYL 277
YP V L + GE NFG PF + I Y+
Sbjct: 166 -----NLYPTVGLQTPGEVVDANFGQSPFVFDIEDYI 197
>sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 184 SYAFDGRRVKKW--NKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRK 241
SY + G + + +PYG ++ GD+IGCC++L + + +NG SLG+AF+
Sbjct: 106 SYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFT---D 162
Query: 242 MGPGFGYYPAVSL-SQGERCVLNFGARPFKYPINCYL 277
+ P YP V L + GE NFG PF + I Y+
Sbjct: 163 LPPNL--YPTVGLQTPGEVVDANFGQSPFVFDIEDYI 197
>sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1
Length = 620
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQG 257
+PYG ++ GD+IGCC++L + + +NG SLG+AF+ + YP V L + G
Sbjct: 156 GQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPA-----NLYPTVGLQTPG 210
Query: 258 ERCVLNFGARPFKYPINCYL 277
E NFG +PF + I Y+
Sbjct: 211 EIVDANFGQQPFLFDIEDYM 230
>sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=2
Length = 620
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 199 AEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRKMGPGFGYYPAVSL-SQG 257
+PYG ++ GD+IGCC++L + + +NG SLG+AF+ + YP V L + G
Sbjct: 156 GQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPA-----NLYPTVGLQTPG 210
Query: 258 ERCVLNFGARPFKYPINCYL 277
E NFG +PF + I Y+
Sbjct: 211 EIVDANFGQQPFLFDIEDYM 230
>sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1
Length = 620
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 184 SYAFDGRRVKKW--NKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSGIRK 241
SY + G + + +PYG ++ GD+IGCC++L + + +NG SLG+AF+ +
Sbjct: 139 SYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPA 198
Query: 242 MGPGFGYYPAVSL-SQGERCVLNFGARPFKYPINCYL 277
YP V L + GE NFG +PF + I Y+
Sbjct: 199 -----NLYPTVGLQTPGEIVDANFGQQPFLFDIEDYM 230
>sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus
musculus GN=Hnrnpul1 PE=1 SV=1
Length = 859
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 121 RIAKLPLLVESLA-MFSSARANVCVWKGKWMYEV-------------TLETSGVQQLGWA 166
R + PL +E A ++S ARA+ V +G+ +E+ T V ++GW+
Sbjct: 229 RSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWS 288
Query: 167 TLSCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSD---EI 223
SC +G+ SY + G K N E YG + D+IGC D + E+
Sbjct: 289 LDSC----STQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVEL 344
Query: 224 SFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGERCVL--NFGARPFKY 271
SF +NG +G+AF ++ G YP V + + C + NFG R Y
Sbjct: 345 SFTKNGKWMGIAFRIQKEALGGQALYPHVLV---KNCAVEFNFGQRAEPY 391
>sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster
GN=RanBPM PE=1 SV=1
Length = 962
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 179 GDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSLGVAFSG 238
GD +S++ G + YG ++ GD+IGCC++ ++ + +NGV LG+AF
Sbjct: 509 GDDGNSFSSSGN--------GQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRD 560
Query: 239 IRKMGPGFGYYPAVSL-SQGERCVLNFGARPFKY 271
+ YP V L + GE NFG PFK+
Sbjct: 561 LPTK-----LYPTVGLQTPGEEVDANFGQEPFKF 589
>sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo
sapiens GN=HNRNPUL1 PE=1 SV=2
Length = 856
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 121 RIAKLPLLVESLA-MFSSARANVCVWKGKWMYEV-------------TLETSGVQQLGWA 166
R + PL +E A ++S ARA+ V +G+ +E+ T V ++GW+
Sbjct: 228 RSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWS 287
Query: 167 TLSCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLD--SD-EI 223
SC +G+ SY + G K N E YG + D+IGC D + +D E+
Sbjct: 288 LDSCSTQ----LGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVEL 343
Query: 224 SFYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGERCVL--NFGARPFKY 271
SF +NG +G+AF ++ G YP V + + C + NFG R Y
Sbjct: 344 SFTKNGKWMGIAFRIQKEALGGQALYPHVLV---KNCAVEFNFGQRAEPY 390
>sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU
PE=1 SV=6
Length = 825
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 121 RIAKLPLLVESLA-MFSSARANVCVWKGKWMYEVTL-ETSGVQQL------------GWA 166
R++ L +ES A +++ RA+ V KGK +E+ + E V+ L GW+
Sbjct: 305 RLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWS 364
Query: 167 TLSCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEI--S 224
+ +G+ + SY + + +K N E E YG+ + D+I C + +SDE+ S
Sbjct: 365 LTTSGML----LGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELS 420
Query: 225 FYRNGVSLGVAFSGIRKMGPGFGYYPAVSLSQGERCVLNFGARPFKY-PI 273
+ +NG LGVAF +++ G +P V L NFG + Y PI
Sbjct: 421 YAKNGQDLGVAFKISKEVLAGRPLFPHV-LCHNCAVEFNFGQKEKPYFPI 469
>sp|Q8VEK3|HNRPU_MOUSE Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus GN=Hnrnpu
PE=1 SV=1
Length = 800
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 121 RIAKLPLLVESLA-MFSSARANVCVWKGKWMYEVT---------LETSGVQ----QLGWA 166
R++ L +ES A +++ RA+ V KGK +E+ L T + ++GW+
Sbjct: 281 RLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWS 340
Query: 167 TLSCPFTDHKGVGDADDSYAFDGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEI--S 224
+ +G+ + SY + + +K N E E YG+ + D+I C + ++DE+ S
Sbjct: 341 LTTSGML----LGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETDEVELS 396
Query: 225 FYRNGVSLGVAFS 237
+ +NG LGVAF
Sbjct: 397 YAKNGQDLGVAFK 409
>sp|Q9TS33|RYR3_RABIT Ryanodine receptor 3 OS=Oryctolagus cuniculus PE=1 SV=1
Length = 4872
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 129 VESLAMFSSARANVCVWKGKWMYEVTLETSGVQQLGWATLSC-PFTDHKGVGDADDSYAF 187
++ + F R+ V GKW +E + T G ++GWA C P + +G
Sbjct: 1068 IDKIRFFRVERS-YAVRSGKWYFEFEVVTGGDMRVGWARPGCRPDIE---LGPMTKPLCL 1123
Query: 188 DGRRVKKWNKEAEPYGQSWVAGDIIGCCIDLDSDEISFYRNGVSL------GVAFSGIRK 241
K G W GD++GC I+LD + F NG L +AF+ +
Sbjct: 1124 KAAGASVGTKVVGILGVPWQPGDVVGCMINLDDASMIFTLNGELLITNKGSELAFADY-E 1182
Query: 242 MGPGFGYYPAVSLSQGERCVLNFGARPFKYPINCYL 277
+ GF ++ LSQ R L A FK+ C L
Sbjct: 1183 IENGFVPICSLGLSQIGRMNLGTDASTFKFYTMCGL 1218
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 184 SYAFDGRRVKKWN----KEAEPYGQSWV-AGDIIGCCIDLDSDEISFYRNGVSLGVAFSG 238
SY FDG + W+ + Q + + D++ CC+DL ISF NG + F
Sbjct: 711 SYGFDGLHL--WSGRIPRAVASINQHLLKSDDVVSCCLDLGVPSISFRINGQPVQGMFEN 768
Query: 239 IRKMGPGFGYYPAVSLSQGERCVLNFGAR--PFKY-PINCYLPLQES 282
G ++P +S S G + G R FK+ P + Y P E+
Sbjct: 769 FNTDGL---FFPVMSFSAGVKVRFLMGGRHGEFKFLPPSGYAPCYEA 812
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 457,309,544
Number of Sequences: 539616
Number of extensions: 19364845
Number of successful extensions: 41323
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 41093
Number of HSP's gapped (non-prelim): 171
length of query: 1245
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1116
effective length of database: 121,958,995
effective search space: 136106238420
effective search space used: 136106238420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)